Dryobates pubescens isolate bDryPub1 chromosome 44, bDryPub1.pri, whole genome shotgun sequence.
type: Entry
definition: Dryobates pubescens isolate bDryPub1 chromosome 44, bDryPub1.pri, whole genome shotgun sequence.
sequence version: NC_071655.1
sequence date: 2023-03-13
sequence: sequence
division: CON
label: NC_071655.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA940839
dblink: SAMN12629497
keyword: WGS
keyword: RefSeq
source: Dryobates pubescens (Downy woodpecker)
organism: Dryobates pubescens
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Piciformes; Picidae; Dryobates.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM026037.1.\nAssembly name: bDryPub1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/10/02. The original whole-genome shotgun project has the\naccession JACNMV000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 16-JUL-2020\nAssembly Method :: FALCON v. 1.3.0 2018.31.08-03.06;\n FALCON-Unzip v. 1.2.0 6.0.0.47841;\n purge_dups v. github\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n Scaff10x v. 4.1.0; Bionano Solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Arrow\n polishing and gap filling v.\n SMRTLink7.0.1; Longranger Align v. 2.2.2;\n freebayes v. 1.3.1; gEVAL manual curation\n v. 2020-07-16; VGP assembly pipeline v.\n 1.6\nAssembly Name :: bDryPub1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 62.43x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_014839835.1-RS_2023_03\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 03/06/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 251455
topology: linear
so has quality: SO_0000987
location: 1..251455
location: region:1-251455:1
RO_0002162: 118200

NC_071655
type: RefSeq
SIO_000068: refseq

PRJNA940839
type: BioProject
SIO_000068: bioproject

SAMN12629497
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251455:1
position: 251455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-251455:1:source
so part of: sequence
organism: Dryobates pubescens
mol type: genomic DNA
isolate: bDryPub1
chromosome: 44
sex: female
tissue type: blood
dev stage: adult
country: USA: North Carolina
lat lon: 36.13054 N 80.2563 W
collection date: 02-Apr-2019
collected by: Matt Fuxjager, Eric Schuppe

118200
type: Taxonomy
SIO_000068: taxonomy

LOC128899327
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: LOC128899327
note: helicase SRCAP-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2808..10351
location: region:2808-10351:1
so has part: feature:2808-10351:1:exon
subclass of: SO_0000010

128899327
type: Gene
SIO_000068: ncbigene

position:2808:1
position: 2808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10351:1
position: 10351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2808-10351:1:exon

LOC128899327
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: LOC128899327
product: helicase SRCAP-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_054177718.1
SIO_010081: LOC128899327
subclass of: SO_0000673
so part of: LOC128899327
location: join(2808..2831,3121..3341,3859..4067,4601..4770,5545..5741,6392..6506,6703..6837,7478..7654,7892..7975,8246..8388,9060..9347,10195..10351)
location: region:2808-10351:1
so has part: feature:2808-2831:1:exon
so has part: feature:3121-3341:1:exon
so has part: feature:3859-4067:1:exon
so has part: feature:4601-4770:1:exon
so has part: feature:5545-5741:1:exon
so has part: feature:6392-6506:1:exon
so has part: feature:6703-6837:1:exon
so has part: feature:7478-7654:1:exon
so has part: feature:7892-7975:1:exon
so has part: feature:8246-8388:1:exon
so has part: feature:9060-9347:1:exon
so has part: feature:10195-10351:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2808-2831:1:exon

position:2831:1
position: 2831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3121-3341:1:exon

position:3121:1
position: 3121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3341:1
position: 3341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3859-4067:1:exon

position:3859:1
position: 3859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4067:1
position: 4067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4601-4770:1:exon

position:4601:1
position: 4601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4770:1
position: 4770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5545-5741:1:exon

position:5545:1
position: 5545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5741:1
position: 5741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6392-6506:1:exon

position:6392:1
position: 6392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6506:1
position: 6506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6703-6837:1:exon

position:6703:1
position: 6703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6837:1
position: 6837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7478-7654:1:exon

position:7478:1
position: 7478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7654:1
position: 7654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7892-7975:1:exon

position:7892:1
position: 7892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7975:1
position: 7975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8246-8388:1:exon

position:8246:1
position: 8246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8388:1
position: 8388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9060-9347:1:exon

position:9060:1
position: 9060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9347:1
position: 9347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:10195-10351:1:exon

position:10195:1
position: 10195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128899327
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: LOC128899327
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: helicase SRCAP-like
translation: MGLGALEGESLEARRGRLRAERLERLLRLNDLRCRLAPVYGSEVLAFCTLPPARRPPPWAGLPGAVLSPPQRLEQLQPLLDRFLVALPAVQSPGVSLASCRPLPWRLRQAALLGERLRGALEPSPGQGALQRLLQAQRCHFPELRLVQYDCGKLQTLDLLLRRLKAESHRVLIFTQMTRMLDVLERFLTYHGHIYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLAGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRLLGDMAIEGGNFTTAYFKQQTIRELFEMAPEEPGRKELDRDRDGELQEEDEDLVATRRTHILEQALCGAEDPEDIRAASQAQAERVAALAEFSDSLSPEEEPRAEPEEETSRAEQEIAALVEQLTPIERYAMNFLEASLEDVSREELKQAEEQVEAARKDIDQAKVAAGRFRLLPPAGEEEEEQEAASGPALGAGAGAGTTSPQPPPATPPPATPSPPSSPSPPSPPAAAAQEPPGEAGAGPGGVAGAGPGRAPRRRRSADVEIRQSRGPGPAAKVLRQLPGRLVTVLETPAQGRQQQQRRRQPPRRCSAAPPAANTRSASAASPGGSPAAAAPPEVALRGRKAKT
SIO_010081: LOC128899327
subclass of: SO_0000673
so part of: LOC128899327
location: join(2808..2831,3121..3341,3859..4067,4601..4770,5545..5741,6392..6506,6703..6837,7478..7654,7892..7975,8246..8388,9060..9347,10195..10351)
location: region:2808-10351:1
so has part: feature:2808-2831:1:exon
so has part: feature:3121-3341:1:exon
so has part: feature:3859-4067:1:exon
so has part: feature:4601-4770:1:exon
so has part: feature:5545-5741:1:exon
so has part: feature:6392-6506:1:exon
so has part: feature:6703-6837:1:exon
so has part: feature:7478-7654:1:exon
so has part: feature:7892-7975:1:exon
so has part: feature:8246-8388:1:exon
so has part: feature:9060-9347:1:exon
so has part: feature:10195-10351:1:exon

XP_054033693.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2808-2831:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3121-3341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3859-4067:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4601-4770:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5545-5741:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6392-6506:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6703-6837:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7478-7654:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7892-7975:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8246-8388:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9060-9347:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10195-10351:1:exon

RNF40
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: RNF40
note: ring finger protein 40; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13011..26758
location: region:13011-26758:1
so has part: feature:13011-26758:1:exon
subclass of: SO_0000010

104304658
type: Gene
SIO_000068: ncbigene

position:13011:1
position: 13011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26758:1
position: 26758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13011-26758:1:exon

RNF40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: RNF40
product: ring finger protein 40
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_054177705.1
SIO_010081: RNF40
subclass of: SO_0000673
so part of: RNF40
location: join(13011..13020,14326..14480,15249..15416,15885..15993,17221..17333,17716..17862,18194..18268,18824..18943,19506..19685,20098..20233,20868..20989,21302..21371,21507..21849,22206..22323,22619..22764,23578..23794,24175..24300,24925..25065,26242..26343,26578..26758)
location: region:13011-26758:1
so has part: feature:13011-13020:1:exon
so has part: feature:14326-14480:1:exon
so has part: feature:15249-15416:1:exon
so has part: feature:15885-15993:1:exon
so has part: feature:17221-17333:1:exon
so has part: feature:17716-17862:1:exon
so has part: feature:18194-18268:1:exon
so has part: feature:18824-18943:1:exon
so has part: feature:19506-19685:1:exon
so has part: feature:20098-20233:1:exon
so has part: feature:20868-20989:1:exon
so has part: feature:21302-21371:1:exon
so has part: feature:21507-21849:1:exon
so has part: feature:22206-22323:1:exon
so has part: feature:22619-22764:1:exon
so has part: feature:23578-23794:1:exon
so has part: feature:24175-24300:1:exon
so has part: feature:24925-25065:1:exon
so has part: feature:26242-26343:1:exon
so has part: feature:26578-26758:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13011-13020:1:exon

position:13020:1
position: 13020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14326-14480:1:exon

position:14326:1
position: 14326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14480:1
position: 14480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15249-15416:1:exon

position:15249:1
position: 15249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15416:1
position: 15416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:15885-15993:1:exon

position:15885:1
position: 15885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15993:1
position: 15993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:17221-17333:1:exon

position:17221:1
position: 17221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17333:1
position: 17333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:17716-17862:1:exon

position:17716:1
position: 17716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17862:1
position: 17862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:18194-18268:1:exon

position:18194:1
position: 18194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18268:1
position: 18268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:18824-18943:1:exon

position:18824:1
position: 18824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18943:1
position: 18943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:19506-19685:1:exon

position:19506:1
position: 19506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19685:1
position: 19685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:20098-20233:1:exon

position:20098:1
position: 20098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20233:1
position: 20233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:20868-20989:1:exon

position:20868:1
position: 20868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20989:1
position: 20989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:21302-21371:1:exon

position:21302:1
position: 21302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21371:1
position: 21371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:21507-21849:1:exon

position:21507:1
position: 21507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21849:1
position: 21849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:22206-22323:1:exon

position:22206:1
position: 22206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22323:1
position: 22323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:22619-22764:1:exon

position:22619:1
position: 22619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22764:1
position: 22764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:23578-23794:1:exon

position:23578:1
position: 23578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23794:1
position: 23794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:24175-24300:1:exon

position:24175:1
position: 24175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24300:1
position: 24300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:24925-25065:1:exon

position:24925:1
position: 24925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25065:1
position: 25065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:26242-26343:1:exon

position:26242:1
position: 26242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26343:1
position: 26343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:26578-26758:1:exon

position:26578:1
position: 26578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNF40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: RNF40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase BRE1B
translation: MSLAGSKRGPPEAGGGPSGGGPPEKKPPREEQPPTTLIEPLRLGGISSTEEMDLKVLQFRNKKLAERLEQRQAAEDELRERIEKLEKRQATDDETLLLVNGSWARLDAELQALLCHYEGEGAAPPAPPAGDPPPEPRPEGGGELGEPGRALLRELLREHRRLQDLTLQLQEKHHRVALELAELQDKAGTAETKVLEMGTTLEGLQWDSAKRRKREGRLDRLLAEALEQLASGSYGSGSSGGFQGGQITLSMQKFEMLNAELESQQELANSRMAELEKLQQELQQAVRRQQGLKVALRSLPEEAVKEALEYKVLQSQFSLLYHESLQVKTQLDEARGLLLATKNSHLRHIEHMESAELGAQKRLRTEVIQLEDSLAQVRKEYELLRIEFEQNLAANEQAGPINREMRHLISSLQNHNHQLKGDVQRYKRKLREVQGEISKLRLQASGAPPPTASAPPPPPPPITPPSSLAAAEAPPQRRPTEEEDSAGAPPPAPSAPPPAPLGPPPAQAPPPRAKEPPPTPPPPRPSQSRDRERERPPRERPKGGGGGGGGGAGAGPPQEEPKKKDSELLKQLRAELKKAQESQREMKLLLDMYKSAPKEQRDKVQLMAAERKSKAEAEELRCRARELEERERRESKKLADEEALRRLRQAEEQIEHLQRKLAATKQEEEALLSEMDVTGQAFEDMQEQNLRLLQQLREKDDANFKLMSERIKANQIHKLLREEKDELAEQVLALKAQVDAQLLVVQKLEEKERGLQSSLAAVEKELALRSQALELNKRKAVEAAQLAEDLRAQGEHVQARLRELQACAAENQAAKEKESLSLKRAQEELSRLRRKLEKQRKVEVYADADQILQEEIKEYRARLTCPCCNARKKDAVLTKCFHVFCFECVKSRYDTRQRKCPKCNAAFGAHDFHRVYIS
SIO_010081: RNF40
subclass of: SO_0000673
so part of: RNF40
location: join(14334..14480,15249..15416,15885..15993,17221..17333,17716..17862,18194..18268,18824..18943,19506..19685,20098..20233,20868..20989,21302..21371,21507..21849,22206..22323,22619..22764,23578..23794,24175..24300,24925..25065,26242..26343,26578..26754)
location: region:14334-26754:1
so has part: feature:14334-14480:1:exon
so has part: feature:15249-15416:1:exon
so has part: feature:15885-15993:1:exon
so has part: feature:17221-17333:1:exon
so has part: feature:17716-17862:1:exon
so has part: feature:18194-18268:1:exon
so has part: feature:18824-18943:1:exon
so has part: feature:19506-19685:1:exon
so has part: feature:20098-20233:1:exon
so has part: feature:20868-20989:1:exon
so has part: feature:21302-21371:1:exon
so has part: feature:21507-21849:1:exon
so has part: feature:22206-22323:1:exon
so has part: feature:22619-22764:1:exon
so has part: feature:23578-23794:1:exon
so has part: feature:24175-24300:1:exon
so has part: feature:24925-25065:1:exon
so has part: feature:26242-26343:1:exon
so has part: feature:26578-26754:1:exon

XP_054033680.1
type: Protein
SIO_000068: ncbiprotein

position:14334:1
position: 14334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26754:1
position: 26754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14334-14480:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15249-15416:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15885-15993:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17221-17333:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17716-17862:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:18194-18268:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18824-18943:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:19506-19685:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:20098-20233:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:20868-20989:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:21302-21371:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:21507-21849:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:22206-22323:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:22619-22764:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:23578-23794:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:24175-24300:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:24925-25065:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26242-26343:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26578-26754:1:exon

LOC104304657
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: LOC104304657
note: sodium/glucose cotransporter 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 28888..39639
location: region:28888-39639:1
so has part: feature:28888-39639:1:exon
subclass of: SO_0000010

104304657
type: Gene
SIO_000068: ncbigene

position:28888:1
position: 28888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39639:1
position: 39639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28888-39639:1:exon

LOC104304657
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: LOC104304657
product: sodium/glucose cotransporter 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
transcript id: XM_054177710.1
SIO_010081: LOC104304657
subclass of: SO_0000673
so part of: LOC104304657
location: join(28888..28917,29699..29803,30694..30753,31434..31538,32363..32468,32750..32830,33282..33481,34283..34418,34935..35042,37089..37239,37906..38074,38502..38717,38991..39077,39529..39639)
location: region:28888-39639:1
so has part: feature:28888-28917:1:exon
so has part: feature:29699-29803:1:exon
so has part: feature:30694-30753:1:exon
so has part: feature:31434-31538:1:exon
so has part: feature:32363-32468:1:exon
so has part: feature:32750-32830:1:exon
so has part: feature:33282-33481:1:exon
so has part: feature:34283-34418:1:exon
so has part: feature:34935-35042:1:exon
so has part: feature:37089-37239:1:exon
so has part: feature:37906-38074:1:exon
so has part: feature:38502-38717:1:exon
so has part: feature:38991-39077:1:exon
so has part: feature:39529-39639:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28888-28917:1:exon

position:28917:1
position: 28917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:29699-29803:1:exon

position:29699:1
position: 29699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29803:1
position: 29803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:30694-30753:1:exon

position:30694:1
position: 30694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30753:1
position: 30753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:31434-31538:1:exon

position:31434:1
position: 31434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31538:1
position: 31538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:32363-32468:1:exon

position:32363:1
position: 32363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32468:1
position: 32468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:32750-32830:1:exon

position:32750:1
position: 32750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32830:1
position: 32830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:33282-33481:1:exon

position:33282:1
position: 33282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33481:1
position: 33481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:34283-34418:1:exon

position:34283:1
position: 34283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34418:1
position: 34418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:34935-35042:1:exon

position:34935:1
position: 34935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35042:1
position: 35042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:37089-37239:1:exon

position:37089:1
position: 37089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37239:1
position: 37239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:37906-38074:1:exon

position:37906:1
position: 37906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38074:1
position: 38074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:38502-38717:1:exon

position:38502:1
position: 38502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38717:1
position: 38717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:38991-39077:1:exon

position:38991:1
position: 38991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39077:1
position: 39077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:39529-39639:1:exon

position:39529:1
position: 39529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104304657
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: LOC104304657
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/glucose cotransporter 2
translation: MAWGPVGASLFASNIGSGHFVGLAGTGAAGGIAVGGFEWSGMFIVLLLGWIFVPIYMRAGVSTMPEYLGLRFGGSRIRLYLALLSLLLYIATKISVDMYSGAIFIQEALGWNLYASVGALLGVTAIYTVTGGLAALMFADLLQTFIIVAGASVLAAYALGAVGGYEGLVQRYPLATPQNLTGPCGRPRPDAFHLLRHPSTGDLPWPGLLLGLGIISAWYWCTDQVIVQRCLAGRSLCHVRAGCVVCGYLKVLPMFLMVLPGMAARVLFPEVVGCADAQHCRRACGTPAGCSNVAYPRLVVTLLPPGLRGLMLAVVLAALMSSLASIFASAGALFTLDVYQKLRPRAGPKQLLLAGRLWVVAMVGLSLAWLPVVEAARGGQLFDYIQAVASYLAPPVAAVFFLAVFVPRVNEPGAFWGLLGGLGLGLLRLVPEVALGTGSCGAPGGCPQVLCGLHYLHFAVLLFLASGAITLGVSFCYPPIPQRHLHRLVFSLRNSTEPRIDLGQEGPKEAPGEAPPPAPAPEDPRWRRVVNLNALLLMAVAVFLWGYFA
SIO_010081: LOC104304657
subclass of: SO_0000673
so part of: LOC104304657
location: join(28903..28917,29699..29803,30694..30753,31434..31538,32363..32468,32750..32830,33282..33481,34283..34418,34935..35042,37089..37239,37906..38074,38502..38717,38991..39077,39529..39639)
location: region:28903-39639:1
so has part: feature:28903-28917:1:exon
so has part: feature:29699-29803:1:exon
so has part: feature:30694-30753:1:exon
so has part: feature:31434-31538:1:exon
so has part: feature:32363-32468:1:exon
so has part: feature:32750-32830:1:exon
so has part: feature:33282-33481:1:exon
so has part: feature:34283-34418:1:exon
so has part: feature:34935-35042:1:exon
so has part: feature:37089-37239:1:exon
so has part: feature:37906-38074:1:exon
so has part: feature:38502-38717:1:exon
so has part: feature:38991-39077:1:exon
so has part: feature:39529-39639:1:exon

XP_054033685.1
type: Protein
SIO_000068: ncbiprotein

position:28903:1
position: 28903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28903-28917:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29699-29803:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:30694-30753:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:31434-31538:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:32363-32468:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:32750-32830:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:33282-33481:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:34283-34418:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:34935-35042:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:37089-37239:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:37906-38074:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:38502-38717:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:38991-39077:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:39529-39639:1:exon

RUSF1
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: RUSF1
note: RUS family member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(40022..47619)
location: region:40022-47619:-1
so has part: feature:40022-47619:-1:exon
subclass of: SO_0000010

128899326
type: Gene
SIO_000068: ncbigene

position:40022:-1
position: 40022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47619:-1
position: 47619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40022-47619:-1:exon

RUSF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: RUSF1
product: RUS family member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_054177711.1
SIO_010081: RUSF1
subclass of: SO_0000673
so part of: RUSF1
location: complement(join(40022..40168,40656..40733,41050..41211,41623..41693,42216..42273,42533..42741,43475..43545,44183..44284,45090..45195,45652..45684,45928..45973,46627..46741,46967..47044,47421..47619))
location: region:40022-47619:-1
so has part: feature:47421-47619:-1:exon
so has part: feature:46967-47044:-1:exon
so has part: feature:46627-46741:-1:exon
so has part: feature:45928-45973:-1:exon
so has part: feature:45652-45684:-1:exon
so has part: feature:45090-45195:-1:exon
so has part: feature:44183-44284:-1:exon
so has part: feature:43475-43545:-1:exon
so has part: feature:42533-42741:-1:exon
so has part: feature:42216-42273:-1:exon
so has part: feature:41623-41693:-1:exon
so has part: feature:41050-41211:-1:exon
so has part: feature:40656-40733:-1:exon
so has part: feature:40022-40168:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47421-47619:-1:exon

position:47421:-1
position: 47421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:46967-47044:-1:exon

position:46967:-1
position: 46967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47044:-1
position: 47044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:46627-46741:-1:exon

position:46627:-1
position: 46627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46741:-1
position: 46741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:45928-45973:-1:exon

position:45928:-1
position: 45928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45973:-1
position: 45973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:45652-45684:-1:exon

position:45652:-1
position: 45652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45684:-1
position: 45684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:45090-45195:-1:exon

position:45090:-1
position: 45090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45195:-1
position: 45195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:44183-44284:-1:exon

position:44183:-1
position: 44183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44284:-1
position: 44284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:43475-43545:-1:exon

position:43475:-1
position: 43475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43545:-1
position: 43545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:42533-42741:-1:exon

position:42533:-1
position: 42533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42741:-1
position: 42741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:42216-42273:-1:exon

position:42216:-1
position: 42216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42273:-1
position: 42273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:41623-41693:-1:exon

position:41623:-1
position: 41623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41693:-1
position: 41693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:41050-41211:-1:exon

position:41050:-1
position: 41050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41211:-1
position: 41211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:40656-40733:-1:exon

position:40656:-1
position: 40656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40733:-1
position: 40733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:40022-40168:-1:exon

position:40168:-1
position: 40168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RUSF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: RUSF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUS family member 1
translation: MQRPQAVSAPGPAARSLCRELWGRREAARYRGGPRGSLLRDQTPGNGTGSALRRALEELLLPQGYPESVSGDYLQYQCWDSLQALCSSLSGALGTRAVLQAVGVGDGAATATGATLGWLLRDGVGIVTRISFAWLQGSRLDCEAKQWRLAADVLNEAALVLELLAPLWPRAALPLLTLAAATKCIVGVAGGATRAALALHQARRDNVADVAAKDGSQETLVNGAGLLLALLLLPLLDGRPWLTWAAVLLLLATHLGANLAAVRALRLRTLNRPRLRLSLAAALRGGAGGGGATFEVPSPDYVNPREPLLPGSSSRLKLHLGAPLHRLVSSEAELRKALESSPKDYIIVLRPSEGWVGVGLRRGAPPDAALRGCSQALLLEELLGPVLPTGSKLGAQLGALQSRLKACAPGSVPWGAVAESSRLWERLGPAFLEGLAAAGWQTERPLLAADQWELEWEEP
SIO_010081: RUSF1
subclass of: SO_0000673
so part of: RUSF1
location: complement(join(40089..40168,40656..40733,41050..41211,41623..41693,42216..42273,42533..42741,43475..43545,44183..44284,45090..45195,45652..45684,45928..45973,46627..46741,46967..47044,47421..47591))
location: region:40089-47591:-1
so has part: feature:47421-47591:-1:exon
so has part: feature:46967-47044:-1:exon
so has part: feature:46627-46741:-1:exon
so has part: feature:45928-45973:-1:exon
so has part: feature:45652-45684:-1:exon
so has part: feature:45090-45195:-1:exon
so has part: feature:44183-44284:-1:exon
so has part: feature:43475-43545:-1:exon
so has part: feature:42533-42741:-1:exon
so has part: feature:42216-42273:-1:exon
so has part: feature:41623-41693:-1:exon
so has part: feature:41050-41211:-1:exon
so has part: feature:40656-40733:-1:exon
so has part: feature:40089-40168:-1:exon

XP_054033686.1
type: Protein
SIO_000068: ncbiprotein

position:40089:-1
position: 40089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47591:-1
position: 47591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47421-47591:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:46967-47044:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:46627-46741:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45928-45973:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45652-45684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:45090-45195:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44183-44284:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43475-43545:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:42533-42741:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:42216-42273:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:41623-41693:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:41050-41211:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:40656-40733:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:40089-40168:-1:exon

LOC104304656
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: LOC104304656
note: IgGFc-binding protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(48640..60890)
location: region:48640-60890:-1
so has part: feature:48640-60890:-1:exon
subclass of: SO_0000010

104304656
type: Gene
SIO_000068: ncbigene

position:48640:-1
position: 48640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60890:-1
position: 60890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48640-60890:-1:exon

LOC104304656
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: LOC104304656
product: IgGFc-binding protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_054177706.1
SIO_010081: LOC104304656
subclass of: SO_0000673
so part of: LOC104304656
location: complement(join(48640..48736,49485..49771,49935..50402,50886..51085,51547..52120,52985..53583,53882..54446,56035..56630,57145..57475,58071..58387,58693..59949,60778..60890))
location: region:48640-60890:-1
so has part: feature:60778-60890:-1:exon
so has part: feature:58693-59949:-1:exon
so has part: feature:58071-58387:-1:exon
so has part: feature:57145-57475:-1:exon
so has part: feature:56035-56630:-1:exon
so has part: feature:53882-54446:-1:exon
so has part: feature:52985-53583:-1:exon
so has part: feature:51547-52120:-1:exon
so has part: feature:50886-51085:-1:exon
so has part: feature:49935-50402:-1:exon
so has part: feature:49485-49771:-1:exon
so has part: feature:48640-48736:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60778-60890:-1:exon

position:60778:-1
position: 60778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:58693-59949:-1:exon

position:58693:-1
position: 58693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59949:-1
position: 59949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:58071-58387:-1:exon

position:58071:-1
position: 58071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58387:-1
position: 58387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:57145-57475:-1:exon

position:57145:-1
position: 57145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57475:-1
position: 57475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:56035-56630:-1:exon

position:56035:-1
position: 56035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56630:-1
position: 56630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:53882-54446:-1:exon

position:53882:-1
position: 53882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54446:-1
position: 54446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:52985-53583:-1:exon

position:52985:-1
position: 52985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53583:-1
position: 53583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:51547-52120:-1:exon

position:51547:-1
position: 51547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52120:-1
position: 52120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:50886-51085:-1:exon

position:50886:-1
position: 50886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51085:-1
position: 51085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:49935-50402:-1:exon

position:49935:-1
position: 49935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50402:-1
position: 50402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:49485-49771:-1:exon

position:49485:-1
position: 49485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49771:-1
position: 49771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:48640-48736:-1:exon

position:48736:-1
position: 48736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104304656
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: LOC104304656
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IgGFc-binding protein-like
translation: MEGSSSTVRAQALLPLLLLLHVATAAPPHLGDNFLVAFMQNELQQSLQSDLRLLLSGSSPSTSVTISMRKPGLRMTLQVPAGQTVLVKIPPQAEMVGSRTFDNAVAVKASGAISVVMVNEKPTSVDSALLAPVHAWGTEYQVVTPGVGTDRYGQFAVAAWDEATQVEVQLKAPVTFQGRSYPRGSVISLRLEPFQAAQFQSPADLSGTKVTSDRPVAVFSGHTCLARFSTCDHLVEQLQPVSSWGTTFIVPPLPFEAQSDMVYVSSSQKTTVEAQHGATKTVRALRAGRTTFYGLQAANALTLKADRGVQVIFFSDGGLKGDISYDPFFMTIPDVSSYCSSYKLFTLEGYDNYGLLVAQASATAGLKLNQRPLGNLSWKPVPGTDYAWAGLNLGRQFGVHTLEHETSPFGLLSVGVREQKAYGLVAICSSDPCRLVSCRPKETCRVEKGEALCAHDYMGTCMGSSPLRYHTFDGLTLHTQGGCTYTLAKYCGEDPTLESFSVEEKRTEGDLKEELTNIYVYGYNISIHKGGSGDIKVNNQAITLPTTLGAEKVQIFRSQGHIVLQTQFGLQVTYDEAWAIALALPSSYFGATCGLCGNFNEDLEDEMKLPGGTPAPSLEEWVESWQDASCQVHCGEQEVLQDTGECAPRCPQNSHFEPCGTSCPATCTQPQAPSSCLQPCRPSCQCDPGFVLREATCVPLESCSCSHQGSSYKLQEEFWADEGCRRRCRCEAGGKVTCREAGCRAHQQCVVAQGVPSCQPARFLTCVGTGDPHYTTFDGLRFDFQGTCLYQLAALCKQGPGLVPFVVTVENNNRGSKAVSFTKKVTLEVYGDVITMSQEHPKKVQVNGAFVELPFGHKEHFEVYHSGVHGFVRTSFGLRVSFDWYSYARVILPAAYAGAVCGLCGNANGDPDDDFATPQGQRAADEVQLGSSWKVGEVPGCSAGCVGDCPSCSQEQKELYRGEQYCGVISSPEGPLKACHQVLNPRSYLEDCAFDSCHYRGHRDTLCKAIAAYVTACQSQGVALEPWRTSTFCGPSCPRHSHYELCGPSCQATCRGAQAEPEGCSSLPCTEGCFCDQGFVLSGAQCVPAAECGCDHQGQYYQKGQEFYQASCRERCLCKGQGLVECEEVFCGAHEECRVEDGVLGCFPASYGRLVVSGDPHYLTFDGRAFHLPGSCTYVLAQVCSPQRRLANFSVLLEHDAGGHGGLALVKRVQVSVHGATISMERGRSWEVMVNRELFTLPLVTEDRKLKVSQEGNNIVLQTAAGLRLLYNSASYLLLTIPDAYRGRVCGLGGNYNGDPGDDFRLPGGSLASSTQDFVTSWKVEGAACTDGCAPEQCPPCDITAAAAAPYRATDSCGLIQDPKGPFGACHPRVSPVEYFNHCLHDLCAAEGARDVLCHSLQAYTAACQAAGAEVGRWRTATFCPLPCPPNSHYELCTRTCDFTCAGLTASVPCSWSCFEGCECDEGFLFDGGACVALERCGCVHHGRYLKFRSSCRELDLAEHLKLWSCSTALCSSPTQAGDTILANNCSTSCSCDLSRGLLCQDTNCPPGQGCTTQDGAQRCTRLEGRCQLRPGATLTTFDGASGKLLASGTYKVASLCQEQSPSWFKVVVEVSECREDQVPAATATFVFFREAFIRVNANGEVWVNGLFTPLPAVVAKVISLKEALGDIIISHPSGLDVLFSPGGEVTVTVGATLVNQLCAPCGNFNGDPRDDLKLPDGRTMRSIGEVVDAWKAKDFTGCHASKLMRTEVEAPIYPLQ
SIO_010081: LOC104304656
subclass of: SO_0000673
so part of: LOC104304656
location: complement(join(48679..48736,49485..49771,49935..50402,50886..51085,51547..52120,52985..53583,53882..54446,56035..56630,57145..57475,58071..58387,58693..59949,60778..60811))
location: region:48679-60811:-1
so has part: feature:60778-60811:-1:exon
so has part: feature:58693-59949:-1:exon
so has part: feature:58071-58387:-1:exon
so has part: feature:57145-57475:-1:exon
so has part: feature:56035-56630:-1:exon
so has part: feature:53882-54446:-1:exon
so has part: feature:52985-53583:-1:exon
so has part: feature:51547-52120:-1:exon
so has part: feature:50886-51085:-1:exon
so has part: feature:49935-50402:-1:exon
so has part: feature:49485-49771:-1:exon
so has part: feature:48679-48736:-1:exon

XP_054033681.1
type: Protein
SIO_000068: ncbiprotein

position:48679:-1
position: 48679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60811:-1
position: 60811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60778-60811:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:58693-59949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:58071-58387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:57145-57475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:56035-56630:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:53882-54446:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:52985-53583:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:51547-52120:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:50886-51085:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:49935-50402:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:49485-49771:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:48679-48736:-1:exon

APBB3
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: APBB3
note: amyloid beta precursor protein binding family B member 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 66641..72124
location: region:66641-72124:1
so has part: feature:66641-72124:1:exon
subclass of: SO_0000010

104304654
type: Gene
SIO_000068: ncbigene

position:66641:1
position: 66641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72124:1
position: 72124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66641-72124:1:exon

APBB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: APBB3
product: amyloid beta precursor protein binding family B member 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_054177716.1
SIO_010081: APBB3
subclass of: SO_0000673
so part of: APBB3
location: join(66641..66777,67906..68117,68415..68491,68743..68800,68957..69097,69456..69583,69656..69700,69788..69902,69989..70076,70264..70347,70517..70969,71246..71669,72018..72124)
location: region:66641-72124:1
so has part: feature:66641-66777:1:exon
so has part: feature:67906-68117:1:exon
so has part: feature:68415-68491:1:exon
so has part: feature:68743-68800:1:exon
so has part: feature:68957-69097:1:exon
so has part: feature:69456-69583:1:exon
so has part: feature:69656-69700:1:exon
so has part: feature:69788-69902:1:exon
so has part: feature:69989-70076:1:exon
so has part: feature:70264-70347:1:exon
so has part: feature:70517-70969:1:exon
so has part: feature:71246-71669:1:exon
so has part: feature:72018-72124:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66641-66777:1:exon

position:66777:1
position: 66777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:67906-68117:1:exon

position:67906:1
position: 67906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68117:1
position: 68117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:68415-68491:1:exon

position:68415:1
position: 68415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68491:1
position: 68491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:68743-68800:1:exon

position:68743:1
position: 68743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68800:1
position: 68800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:68957-69097:1:exon

position:68957:1
position: 68957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69097:1
position: 69097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:69456-69583:1:exon

position:69456:1
position: 69456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69583:1
position: 69583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:69656-69700:1:exon

position:69656:1
position: 69656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69700:1
position: 69700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:69788-69902:1:exon

position:69788:1
position: 69788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69902:1
position: 69902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:69989-70076:1:exon

position:69989:1
position: 69989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70076:1
position: 70076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:70264-70347:1:exon

position:70264:1
position: 70264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70347:1
position: 70347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:70517-70969:1:exon

position:70517:1
position: 70517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70969:1
position: 70969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:71246-71669:1:exon

position:71246:1
position: 71246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71669:1
position: 71669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:72018-72124:1:exon

position:72018:1
position: 72018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

APBB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: APBB3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: amyloid-beta A4 precursor protein-binding family B member 3
translation: MLGKDYMLAIVLVNCDDNLWSDQNLETDPDLPPGWRKIHDSLGTYYWHVPTGTTQWQHPACTISPGGHGTADGDEALQRMVEDVGREDCQTSEAKYLAKERPIPSPMASLSRRTSLPWHGDDFQHSMEPSSKCFAVRSLGWVEIPEEDLAPGKSSIAVNNCIQQLSNSKGQGSAENRGEGQDLVMILKKDTMSLVDPLDHSLIHQQPILNIRVWGVGCNNGSNLFSLPDCRCGCRDRDFAFVASDKDTCVLKCHVFHCNVPAKGIAKALHEMCSKIMAERAVASSGLRRAATLEPVSADDLPLQVDILEAVRQSMQTYEALYIGSLPVPRAMGMDVLNEAIEKMTRGPGREQWTPSLIHVSDTAMRVHPVQVGRGMGGTLLPQGCCRHPSWGAGLPAEGTWWGVAGLPGAWPGVDGPTGSSQEDEDAAHIWECQVRYVTFLGVGRDAHTFALIVDTGRRFQCAAFWCEPDAGTISEAVQAACMVQYQKCLVAAAPGAKAKKGRGRAGSSASGDAAGGAAKASGGSAGAAGPGALKRGLFAFLEAFRLRRALLHTP
SIO_010081: APBB3
subclass of: SO_0000673
so part of: APBB3
location: join(66729..66777,67906..68117,68415..68491,68743..68800,68957..69097,69456..69583,69656..69700,69788..69902,69989..70076,70264..70347,70517..70969,71246..71464)
location: region:66729-71464:1
so has part: feature:66729-66777:1:exon
so has part: feature:67906-68117:1:exon
so has part: feature:68415-68491:1:exon
so has part: feature:68743-68800:1:exon
so has part: feature:68957-69097:1:exon
so has part: feature:69456-69583:1:exon
so has part: feature:69656-69700:1:exon
so has part: feature:69788-69902:1:exon
so has part: feature:69989-70076:1:exon
so has part: feature:70264-70347:1:exon
so has part: feature:70517-70969:1:exon
so has part: feature:71246-71464:1:exon

XP_054033691.1
type: Protein
SIO_000068: ncbiprotein

position:66729:1
position: 66729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71464:1
position: 71464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66729-66777:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:67906-68117:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:68415-68491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:68743-68800:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:68957-69097:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:69456-69583:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69656-69700:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:69788-69902:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:69989-70076:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:70264-70347:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:70517-70969:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:71246-71464:1:exon

SRA1
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: SRA1
note: steroid receptor RNA activator 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 71645..73485
location: region:71645-73485:1
so has part: feature:71645-73485:1:exon
subclass of: SO_0000010

128899325
type: Gene
SIO_000068: ncbigene

position:71645:1
position: 71645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73485:1
position: 73485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71645-73485:1:exon

SRA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: SRA1
product: steroid receptor RNA activator 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_054177707.1
SIO_010081: SRA1
subclass of: SO_0000673
so part of: SRA1
location: join(71645..71669,71833..72171,72521..72735,72875..72983,73092..73485)
location: region:71645-73485:1
so has part: feature:71645-71669:1:exon
so has part: feature:71833-72171:1:exon
so has part: feature:72521-72735:1:exon
so has part: feature:72875-72983:1:exon
so has part: feature:73092-73485:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71645-71669:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:71833-72171:1:exon

position:71833:1
position: 71833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72171:1
position: 72171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:72521-72735:1:exon

position:72521:1
position: 72521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72735:1
position: 72735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:72875-72983:1:exon

position:72875:1
position: 72875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72983:1
position: 72983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:73092-73485:1:exon

position:73092:1
position: 73092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SRA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: SRA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: steroid receptor RNA activator 1
translation: MAELYVKPGLPLVRGAGGAVPGEGALEVPWVERRGTGSLSGWWGAGGRASPVLAQGPELPCLRDPLCLPQRITLRFAAAGNQERGWNDPPQFSYGLQAQAGGSRRSLLTRRACPPPEGAPPGAPPDPARAPSVPAAPPPRALGPHPPGAASPAPRAGSAGTSAADCPEERGLSADAVLAPLKEALDACRARVQKQVCDDIGRRLTLLGDAWAQGKLSAPVRKRMTLLVQELQQQHWDAADEIHRSLMVDHVNEVSQWLVGVKRLIAETRSLPAAETEGSSEADPGQEDP
SIO_010081: SRA1
subclass of: SO_0000673
so part of: SRA1
location: join(71645..71669,71833..72171,72521..72735,72875..72983,73092..73273)
location: region:71645-73273:1
so has part: feature:71645-71669:1:exon
so has part: feature:71833-72171:1:exon
so has part: feature:72521-72735:1:exon
so has part: feature:72875-72983:1:exon
so has part: feature:73092-73273:1:exon

XP_054033682.1
type: Protein
SIO_000068: ncbiprotein

position:73273:1
position: 73273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71645-71669:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:71833-72171:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:72521-72735:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:72875-72983:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:73092-73273:1:exon

ANKHD1
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: ANKHD1
note: ankyrin repeat and KH domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(76973..173544)
location: region:76973-173544:-1
so has part: feature:76973-173544:-1:exon
subclass of: SO_0000010

104304653
type: Gene
SIO_000068: ncbigene

position:76973:-1
position: 76973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173544:-1
position: 173544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76973-173544:-1:exon

ANKHD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: ANKHD1
product: ankyrin repeat and KH domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_054177713.1
SIO_010081: ANKHD1
subclass of: SO_0000673
so part of: ANKHD1
location: complement(join(76973..77032,77452..77616,78662..78837,79914..80168,81291..81470,86300..87912,88194..88343,88943..89053,90414..90560,90884..90961,91368..91821,92167..92341,93815..93931,94227..94322,94706..94868,95487..95662,96842..97055,97810..97952,99355..99500,100314..100425,100578..100723,106807..107550,116588..116690,117484..117627,117778..117905,118458..118545,122386..122445,127360..127469,129259..129450,129673..129910,132959..133053,134565..134798,135652..135799,136548..136695,141436..141592,157321..157474,173164..173544))
location: region:76973-173544:-1
so has part: feature:173164-173544:-1:exon
so has part: feature:157321-157474:-1:exon
so has part: feature:141436-141592:-1:exon
so has part: feature:136548-136695:-1:exon
so has part: feature:135652-135799:-1:exon
so has part: feature:134565-134798:-1:exon
so has part: feature:132959-133053:-1:exon
so has part: feature:129673-129910:-1:exon
so has part: feature:129259-129450:-1:exon
so has part: feature:127360-127469:-1:exon
so has part: feature:122386-122445:-1:exon
so has part: feature:118458-118545:-1:exon
so has part: feature:117778-117905:-1:exon
so has part: feature:117484-117627:-1:exon
so has part: feature:116588-116690:-1:exon
so has part: feature:106807-107550:-1:exon
so has part: feature:100578-100723:-1:exon
so has part: feature:100314-100425:-1:exon
so has part: feature:99355-99500:-1:exon
so has part: feature:97810-97952:-1:exon
so has part: feature:96842-97055:-1:exon
so has part: feature:95487-95662:-1:exon
so has part: feature:94706-94868:-1:exon
so has part: feature:94227-94322:-1:exon
so has part: feature:93815-93931:-1:exon
so has part: feature:92167-92341:-1:exon
so has part: feature:91368-91821:-1:exon
so has part: feature:90884-90961:-1:exon
so has part: feature:90414-90560:-1:exon
so has part: feature:88943-89053:-1:exon
so has part: feature:88194-88343:-1:exon
so has part: feature:86300-87912:-1:exon
so has part: feature:81291-81470:-1:exon
so has part: feature:79914-80168:-1:exon
so has part: feature:78662-78837:-1:exon
so has part: feature:77452-77616:-1:exon
so has part: feature:76973-77032:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:173164-173544:-1:exon

position:173164:-1
position: 173164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:157321-157474:-1:exon

position:157321:-1
position: 157321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157474:-1
position: 157474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:141436-141592:-1:exon

position:141436:-1
position: 141436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141592:-1
position: 141592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:136548-136695:-1:exon

position:136548:-1
position: 136548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136695:-1
position: 136695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:135652-135799:-1:exon

position:135652:-1
position: 135652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135799:-1
position: 135799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:134565-134798:-1:exon

position:134565:-1
position: 134565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134798:-1
position: 134798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:132959-133053:-1:exon

position:132959:-1
position: 132959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133053:-1
position: 133053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:129673-129910:-1:exon

position:129673:-1
position: 129673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129910:-1
position: 129910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:129259-129450:-1:exon

position:129259:-1
position: 129259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129450:-1
position: 129450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:127360-127469:-1:exon

position:127360:-1
position: 127360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127469:-1
position: 127469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:122386-122445:-1:exon

position:122386:-1
position: 122386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122445:-1
position: 122445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:118458-118545:-1:exon

position:118458:-1
position: 118458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118545:-1
position: 118545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:117778-117905:-1:exon

position:117778:-1
position: 117778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117905:-1
position: 117905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:117484-117627:-1:exon

position:117484:-1
position: 117484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117627:-1
position: 117627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:116588-116690:-1:exon

position:116588:-1
position: 116588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116690:-1
position: 116690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:106807-107550:-1:exon

position:106807:-1
position: 106807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107550:-1
position: 107550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:100578-100723:-1:exon

position:100578:-1
position: 100578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100723:-1
position: 100723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:100314-100425:-1:exon

position:100314:-1
position: 100314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100425:-1
position: 100425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:99355-99500:-1:exon

position:99355:-1
position: 99355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99500:-1
position: 99500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:97810-97952:-1:exon

position:97810:-1
position: 97810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97952:-1
position: 97952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:96842-97055:-1:exon

position:96842:-1
position: 96842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97055:-1
position: 97055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:95487-95662:-1:exon

position:95487:-1
position: 95487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95662:-1
position: 95662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:94706-94868:-1:exon

position:94706:-1
position: 94706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94868:-1
position: 94868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:94227-94322:-1:exon

position:94227:-1
position: 94227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94322:-1
position: 94322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:93815-93931:-1:exon

position:93815:-1
position: 93815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93931:-1
position: 93931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:92167-92341:-1:exon

position:92167:-1
position: 92167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92341:-1
position: 92341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:91368-91821:-1:exon

position:91368:-1
position: 91368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91821:-1
position: 91821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:90884-90961:-1:exon

position:90884:-1
position: 90884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90961:-1
position: 90961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:90414-90560:-1:exon

position:90414:-1
position: 90414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90560:-1
position: 90560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:88943-89053:-1:exon

position:88943:-1
position: 88943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89053:-1
position: 89053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:88194-88343:-1:exon

position:88194:-1
position: 88194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88343:-1
position: 88343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:86300-87912:-1:exon

position:86300:-1
position: 86300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87912:-1
position: 87912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:81291-81470:-1:exon

position:81291:-1
position: 81291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81470:-1
position: 81470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:79914-80168:-1:exon

position:79914:-1
position: 79914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80168:-1
position: 80168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:78662-78837:-1:exon

position:78662:-1
position: 78662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78837:-1
position: 78837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:77452-77616:-1:exon

position:77452:-1
position: 77452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77616:-1
position: 77616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:76973-77032:-1:exon

position:77032:-1
position: 77032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANKHD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: ANKHD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and KH domain-containing protein 1 isoform X1
translation: MLTDGTAAPVGDEEIDSVAPRAPPAAEPPAAVGPSPLGLRAVRLFGEAGPGGPGGPGAPAAAEAALDFKLAAAVLRSGGGGGGSGSDEDEVSEVESFILDQEDLDNPVLKTTSELFLSSAAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRAENNHNAGQVDNRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAAASGGYVDIVKLLLVHCADVNAQSSTGNTALTYACAGGFVDVVKVLLKAGANIEDHNENGHTPLMEAASAGHVEVARVLLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQAGADLDKQEDIKKTVLEGIEPGKHQEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVPAADLAQLTPPSQDQSQVPRVPVHTLAMVVPPQEPDRTPQENSPPLLGVVKGASKQKSSSLQVADKDLLPPFHPYQPLECIVEETEGKLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQKVERQLQMKTQQQFTKEYLETKGQTDTPLSLQQQCPLPGVFPEVEADKGLPEDNFSGLPQVDTILSKDDEHHQSPAPAEQIDFVPIQPLPAPQCHFSGNLGYNGTESLELQKALGNQQHVGQQQQLAGQGLLVQEADGLMVATPAQTLTDTLDDLIAAVNSRVPSGSTSSLHTAESPASEPCSQAACNVPSQSMLPMYPSVDIDAHTESNHDTALTLACAGGHEELVSVLIARGANIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLINRGAHIDVRNKKGNTPLWLAANGGHYDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQFLVKEVNQFPSDIECMRYIATITDKDLLKKCHQCVETIVKAKDQQAAEANKNATILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKETLELQEDDDDEENDDEVEQEVPIEPPSATTTTTIGISATSTTFTTAFGKKRANVVTTPSTNRKNKKNKTKETPQNMQIILPDQHISLAQQKADKNKINGEPRGGGASGNSDSDNLDSTDCNSESSSGGKSQELNFTMDTNSSERRYASLLSPSQDDKPGALAPKAPARREEVDDSEHFTCQVDGQFDLTLSSQRLDGEGHSNSLSAAYKPVSLPLTSPNVKLNLTSPKRGQKREEGWKEVVRRQVGRVLKDPAPSNTLQPAPMEQFQLQRGGRCCSGAKRSKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGTESTRYAVQLINALIQDPAKELEDLIPKTHIRTPASSTKSIHASFSSGVSTATASNKNSFPLGAPPLVTSQSSSLSTFQPTTKLNKNVPANVRSSFPVSLPLAYSHPHFALLAAQTMQQIRHPRLPMAQFGGTFSPSPNTWGPFPVRPVNPGSTNSSPKHNSSSRVGGQNGNVLQTESPGL…
SIO_010081: ANKHD1
subclass of: SO_0000673
so part of: ANKHD1
location: complement(join(76973..77032,77452..77616,78662..78837,79914..80168,81291..81470,86300..87912,88194..88343,88943..89053,90414..90560,90884..90961,91368..91821,92167..92341,93815..93931,94227..94322,94706..94868,95487..95662,96842..97055,97810..97952,99355..99500,100314..100425,100578..100723,106807..107550,116588..116690,117484..117627,117778..117905,118458..118545,122386..122445,127360..127469,129259..129450,129673..129910,132959..133053,134565..134798,135652..135799,136548..136695,141436..141592,157321..157474,173164..173442))
location: region:76973-173442:-1
so has part: feature:173164-173442:-1:exon
so has part: feature:157321-157474:-1:exon
so has part: feature:141436-141592:-1:exon
so has part: feature:136548-136695:-1:exon
so has part: feature:135652-135799:-1:exon
so has part: feature:134565-134798:-1:exon
so has part: feature:132959-133053:-1:exon
so has part: feature:129673-129910:-1:exon
so has part: feature:129259-129450:-1:exon
so has part: feature:127360-127469:-1:exon
so has part: feature:122386-122445:-1:exon
so has part: feature:118458-118545:-1:exon
so has part: feature:117778-117905:-1:exon
so has part: feature:117484-117627:-1:exon
so has part: feature:116588-116690:-1:exon
so has part: feature:106807-107550:-1:exon
so has part: feature:100578-100723:-1:exon
so has part: feature:100314-100425:-1:exon
so has part: feature:99355-99500:-1:exon
so has part: feature:97810-97952:-1:exon
so has part: feature:96842-97055:-1:exon
so has part: feature:95487-95662:-1:exon
so has part: feature:94706-94868:-1:exon
so has part: feature:94227-94322:-1:exon
so has part: feature:93815-93931:-1:exon
so has part: feature:92167-92341:-1:exon
so has part: feature:91368-91821:-1:exon
so has part: feature:90884-90961:-1:exon
so has part: feature:90414-90560:-1:exon
so has part: feature:88943-89053:-1:exon
so has part: feature:88194-88343:-1:exon
so has part: feature:86300-87912:-1:exon
so has part: feature:81291-81470:-1:exon
so has part: feature:79914-80168:-1:exon
so has part: feature:78662-78837:-1:exon
so has part: feature:77452-77616:-1:exon
so has part: feature:76973-77032:-1:exon

XP_054033688.1
type: Protein
SIO_000068: ncbiprotein

position:173442:-1
position: 173442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173164-173442:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:157321-157474:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:141436-141592:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136548-136695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:135652-135799:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:134565-134798:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:132959-133053:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129673-129910:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129259-129450:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:127360-127469:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:122386-122445:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:118458-118545:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:117778-117905:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:117484-117627:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:116588-116690:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:106807-107550:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:100578-100723:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:100314-100425:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:99355-99500:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:97810-97952:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:96842-97055:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:95487-95662:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:94706-94868:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:94227-94322:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:93815-93931:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:92167-92341:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:91368-91821:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:90884-90961:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:90414-90560:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:88943-89053:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:88194-88343:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:86300-87912:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:81291-81470:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:79914-80168:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:78662-78837:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:77452-77616:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:76973-77032:-1:exon

ANKHD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: ANKHD1
product: ankyrin repeat and KH domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_054177714.1
SIO_010081: ANKHD1
subclass of: SO_0000673
so part of: ANKHD1
location: complement(join(122369..122445,129259..129450,129673..129910,132959..133053,134565..134798,135652..135799,136548..136695,141436..141592,157321..157474,173164..173544))
location: region:122369-173544:-1
so has part: feature:173164-173544:-1:exon
so has part: feature:157321-157474:-1:exon
so has part: feature:141436-141592:-1:exon
so has part: feature:136548-136695:-1:exon
so has part: feature:135652-135799:-1:exon
so has part: feature:134565-134798:-1:exon
so has part: feature:132959-133053:-1:exon
so has part: feature:129673-129910:-1:exon
so has part: feature:129259-129450:-1:exon
so has part: feature:122369-122445:-1:exon

position:122369:-1
position: 122369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173164-173544:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:157321-157474:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:141436-141592:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136548-136695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:135652-135799:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:134565-134798:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:132959-133053:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129673-129910:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129259-129450:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:122369-122445:-1:exon

ANKHD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: ANKHD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and KH domain-containing protein 1 isoform X2
translation: MLTDGTAAPVGDEEIDSVAPRAPPAAEPPAAVGPSPLGLRAVRLFGEAGPGGPGGPGAPAAAEAALDFKLAAAVLRSGGGGGGSGSDEDEVSEVESFILDQEDLDNPVLKTTSELFLSSAAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRAENNHNAGQVDNRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAAASGGYVDIVKLLLVHCADVNAQSSTGNTALTYACAGGFVDVVKVLLKAGANIEDHNENGHTPLMEAASAGHVEVARVLLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGQAGGHKEDCFGGHRAGQASGETGL
SIO_010081: ANKHD1
subclass of: SO_0000673
so part of: ANKHD1
location: complement(join(122369..122445,129259..129450,129673..129910,132959..133053,134565..134798,135652..135799,136548..136695,141436..141592,157321..157474,173164..173442))
location: region:122369-173442:-1
so has part: feature:173164-173442:-1:exon
so has part: feature:157321-157474:-1:exon
so has part: feature:141436-141592:-1:exon
so has part: feature:136548-136695:-1:exon
so has part: feature:135652-135799:-1:exon
so has part: feature:134565-134798:-1:exon
so has part: feature:132959-133053:-1:exon
so has part: feature:129673-129910:-1:exon
so has part: feature:129259-129450:-1:exon
so has part: feature:122369-122445:-1:exon

XP_054033689.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173164-173442:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:157321-157474:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:141436-141592:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136548-136695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:135652-135799:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:134565-134798:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:132959-133053:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129673-129910:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129259-129450:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:122369-122445:-1:exon

SLC4A9
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: SLC4A9
note: solute carrier family 4 member 9; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(174670..187052)
location: region:174670-187052:-1
so has part: feature:174670-187052:-1:exon
subclass of: SO_0000010

104304652
type: Gene
SIO_000068: ncbigene

position:174670:-1
position: 174670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187052:-1
position: 187052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174670-187052:-1:exon

SLC4A9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: SLC4A9
product: solute carrier family 4 member 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98 Proteins
transcript id: XM_054177709.1
SIO_010081: SLC4A9
subclass of: SO_0000673
so part of: SLC4A9
location: complement(join(174670..174909,175206..175379,176155..176223,177292..177364,177593..177771,177945..178106,178713..178826,178954..179136,179224..179279,179877..180148,180263..180396,180581..180755,180934..181014,181578..181777,182082..182169,183816..183973,184049..184110,184248..184397,184628..184788,186726..186878,186967..187052))
location: region:174670-187052:-1
so has part: feature:186967-187052:-1:exon
so has part: feature:186726-186878:-1:exon
so has part: feature:184628-184788:-1:exon
so has part: feature:184248-184397:-1:exon
so has part: feature:184049-184110:-1:exon
so has part: feature:183816-183973:-1:exon
so has part: feature:182082-182169:-1:exon
so has part: feature:181578-181777:-1:exon
so has part: feature:180934-181014:-1:exon
so has part: feature:180581-180755:-1:exon
so has part: feature:180263-180396:-1:exon
so has part: feature:179877-180148:-1:exon
so has part: feature:179224-179279:-1:exon
so has part: feature:178954-179136:-1:exon
so has part: feature:178713-178826:-1:exon
so has part: feature:177945-178106:-1:exon
so has part: feature:177593-177771:-1:exon
so has part: feature:177292-177364:-1:exon
so has part: feature:176155-176223:-1:exon
so has part: feature:175206-175379:-1:exon
so has part: feature:174670-174909:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186967-187052:-1:exon

position:186967:-1
position: 186967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:186726-186878:-1:exon

position:186726:-1
position: 186726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186878:-1
position: 186878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:184628-184788:-1:exon

position:184628:-1
position: 184628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184788:-1
position: 184788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:184248-184397:-1:exon

position:184248:-1
position: 184248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184397:-1
position: 184397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:184049-184110:-1:exon

position:184049:-1
position: 184049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184110:-1
position: 184110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:183816-183973:-1:exon

position:183816:-1
position: 183816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183973:-1
position: 183973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:182082-182169:-1:exon

position:182082:-1
position: 182082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182169:-1
position: 182169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:181578-181777:-1:exon

position:181578:-1
position: 181578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181777:-1
position: 181777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:180934-181014:-1:exon

position:180934:-1
position: 180934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181014:-1
position: 181014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:180581-180755:-1:exon

position:180581:-1
position: 180581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180755:-1
position: 180755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:180263-180396:-1:exon

position:180263:-1
position: 180263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180396:-1
position: 180396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:179877-180148:-1:exon

position:179877:-1
position: 179877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180148:-1
position: 180148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:179224-179279:-1:exon

position:179224:-1
position: 179224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179279:-1
position: 179279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:178954-179136:-1:exon

position:178954:-1
position: 178954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179136:-1
position: 179136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:178713-178826:-1:exon

position:178713:-1
position: 178713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178826:-1
position: 178826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:177945-178106:-1:exon

position:177945:-1
position: 177945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178106:-1
position: 178106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:177593-177771:-1:exon

position:177593:-1
position: 177593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177771:-1
position: 177771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:177292-177364:-1:exon

position:177292:-1
position: 177292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177364:-1
position: 177364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:176155-176223:-1:exon

position:176155:-1
position: 176155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176223:-1
position: 176223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:175206-175379:-1:exon

position:175206:-1
position: 175206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175379:-1
position: 175379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:174670-174909:-1:exon

position:174909:-1
position: 174909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC4A9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: SLC4A9
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(181622..181624),aa:OTHER)
product: LOW QUALITY PROTEIN: anion exchange protein 4
translation: MPSEPEATEGMPVAASAGSHASPHAWSSCIFPSSTALASERASAILQQEEQQDAICPLLFIQLNQLLSTPAGLEWRETARWMKFEEKVEDGGGRWSAPHVPALQLHSLFQLRVCLQEGTILLDLDASSFKEIIDQVLSGQPEGVGLQPELRQRLAALLLLQPRHQPSRALLQLLAECGVAPCRGKAKSCPEPGAQLSETPLEEQLRNRLQKKIPRGTEAAHVAVGEVDFLEKPFTAFVRLRRGVALGSLAEVALPSRFLFILLGPQTKVKAYHEVGRAMATLLTDEHFRRAAWQAECREDLLAGMEAFLDELTVLPPGKWDHSAQIPPPSCLLPPHRXAGGRTPAASASSSTGNGDMAAAAGRASLRHSHSGDELERTGRLFGGLWQDIQRKLPWYSSDFSDALHPQCLSAVLYIYLATVTNAITFGGMLGDATANMQGVMESFLGTAFAGSIFCLFSGQPLTILSSTGPVLVFERLLFSFSHDHDLDYLEFRLWIGLWVAFFGVVLVATEASHLVRYFTRFTEEGFCALISLIFICDSLKKMLSLADTFPINWQYRLDNVTSYSCICNLSSPGHSSAGNGTLLPSPLDPQQPPAALAGLSRTQCLDQGGHLLGTSCQYVPDVTLFSFLLFGGTFLSCTVLKLFRSSRYFPAGVRKLVSDFAIVLAILASCAVDAALGLETPKLLIPSELKPTNPERGWIVFPFRANPWWVCLVSVVPAILATILIFMDQQITAVMLNRREYKLQKGAGFHLDFLCVSLLMVVTSATGLPWYVSATVISLAHMESLRKESMASAPGEQPEFLGIREQRLTGLTVFTLMGVSVFMAPVLKHIPMPVLYGVFLHMGVAALNSIQLTDRVRLLLMPAKHQPDLAYLRHVPLHKVHLFTFIQLLCLALLWVIKSSMAAILFPVMLLALVGIRKGLECIFSLHDLSWLDSLLPNTASKEAEGRQPRKQQVGGCNGEEVSDVLPAVLLHSHPQGCLNGGDAPGLN
SIO_010081: SLC4A9
subclass of: SO_0000673
so part of: SLC4A9
location: complement(join(174670..174909,175206..175379,176155..176223,177292..177364,177593..177771,177945..178106,178713..178826,178954..179136,179224..179279,179877..180148,180263..180396,180581..180755,180934..181014,181578..181777,182082..182169,183816..183973,184049..184110,184248..184397,184628..184788,186726..186878,186967..187052))
location: region:174670-187052:-1
so has part: feature:186967-187052:-1:exon
so has part: feature:186726-186878:-1:exon
so has part: feature:184628-184788:-1:exon
so has part: feature:184248-184397:-1:exon
so has part: feature:184049-184110:-1:exon
so has part: feature:183816-183973:-1:exon
so has part: feature:182082-182169:-1:exon
so has part: feature:181578-181777:-1:exon
so has part: feature:180934-181014:-1:exon
so has part: feature:180581-180755:-1:exon
so has part: feature:180263-180396:-1:exon
so has part: feature:179877-180148:-1:exon
so has part: feature:179224-179279:-1:exon
so has part: feature:178954-179136:-1:exon
so has part: feature:178713-178826:-1:exon
so has part: feature:177945-178106:-1:exon
so has part: feature:177593-177771:-1:exon
so has part: feature:177292-177364:-1:exon
so has part: feature:176155-176223:-1:exon
so has part: feature:175206-175379:-1:exon
so has part: feature:174670-174909:-1:exon

XP_054033684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186967-187052:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:186726-186878:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:184628-184788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:184248-184397:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:184049-184110:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:183816-183973:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:182082-182169:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:181578-181777:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:180934-181014:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:180581-180755:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:180263-180396:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:179877-180148:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:179224-179279:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:178954-179136:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:178713-178826:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:177945-178106:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:177593-177771:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:177292-177364:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:176155-176223:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:175206-175379:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:174670-174909:-1:exon

HBEGF
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: HBEGF
note: heparin binding EGF like growth factor; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 189787..196210
location: region:189787-196210:1
so has part: feature:189787-196210:1:exon
subclass of: SO_0000010

104304651
type: Gene
SIO_000068: ncbigene

position:189787:1
position: 189787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196210:1
position: 196210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189787-196210:1:exon

HBEGF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: HBEGF
product: heparin binding EGF like growth factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_054177717.1
SIO_010081: HBEGF
subclass of: SO_0000673
so part of: HBEGF
location: join(189787..189910,190189..190356,192624..192801,194666..194821,194932..195024,196061..196210)
location: region:189787-196210:1
so has part: feature:189787-189910:1:exon
so has part: feature:190189-190356:1:exon
so has part: feature:192624-192801:1:exon
so has part: feature:194666-194821:1:exon
so has part: feature:194932-195024:1:exon
so has part: feature:196061-196210:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:189787-189910:1:exon

position:189910:1
position: 189910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:190189-190356:1:exon

position:190189:1
position: 190189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190356:1
position: 190356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:192624-192801:1:exon

position:192624:1
position: 192624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192801:1
position: 192801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:194666-194821:1:exon

position:194666:1
position: 194666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194821:1
position: 194821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:194932-195024:1:exon

position:194932:1
position: 194932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195024:1
position: 195024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:196061-196210:1:exon

position:196061:1
position: 196061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HBEGF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: HBEGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proheparin-binding EGF-like growth factor
translation: MDGRAVLIHALLAAVCSVAASGLGRDERHNEVLRRGGGAPVLATAPLLGRSLEKEGGGAASGDDLSELPRVAFLSKPQGLVTPKKKGNGNKRRKGKGLGKKRDPCLRKYKDFCIHGECKYIRELGAPSCICQPGYHGERCHGLLLPVEHPPSAYDHTTALAVVAVVLSSLCLVIIAALLMLKCHKRGVYDVENEEKIKLGITVNH
SIO_010081: HBEGF
subclass of: SO_0000673
so part of: HBEGF
location: join(189868..189910,190189..190356,192624..192801,194666..194821,194932..195004)
location: region:189868-195004:1
so has part: feature:189868-189910:1:exon
so has part: feature:190189-190356:1:exon
so has part: feature:192624-192801:1:exon
so has part: feature:194666-194821:1:exon
so has part: feature:194932-195004:1:exon

XP_054033692.1
type: Protein
SIO_000068: ncbiprotein

position:189868:1
position: 189868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195004:1
position: 195004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189868-189910:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:190189-190356:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192624-192801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:194666-194821:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:194932-195004:1:exon

PFDN1
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: PFDN1
note: prefoldin subunit 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 199638..230397
location: region:199638-230397:1
so has part: feature:199638-230397:1:exon
subclass of: SO_0000010

104304650
type: Gene
SIO_000068: ncbigene

position:199638:1
position: 199638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230397:1
position: 230397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199638-230397:1:exon

PFDN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: PFDN1
product: prefoldin subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_054177712.1
SIO_010081: PFDN1
subclass of: SO_0000673
so part of: PFDN1
location: join(199638..199687,199885..200051,215024..215108,230247..230397)
location: region:199638-230397:1
so has part: feature:199638-199687:1:exon
so has part: feature:199885-200051:1:exon
so has part: feature:215024-215108:1:exon
so has part: feature:230247-230397:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:199638-199687:1:exon

position:199687:1
position: 199687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:199885-200051:1:exon

position:199885:1
position: 199885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200051:1
position: 200051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:215024-215108:1:exon

position:215024:1
position: 215024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215108:1
position: 215108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:230247-230397:1:exon

position:230247:1
position: 230247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PFDN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: PFDN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prefoldin subunit 1
translation: MAAPVDLELKKAFTELQAKVIDTQQKVKLADIQIEQLTKTKKHAHLTDTEVMMLVDETRMYEGVGRMFILQSKGVIHNQLLEKQRIAEEKIKELEQKKSYLERSVKEAEDNIREMLLARRAQ
SIO_010081: PFDN1
subclass of: SO_0000673
so part of: PFDN1
location: join(199655..199687,199885..200051,215024..215108,230247..230330)
location: region:199655-230330:1
so has part: feature:199655-199687:1:exon
so has part: feature:199885-200051:1:exon
so has part: feature:215024-215108:1:exon
so has part: feature:230247-230330:1:exon

XP_054033687.1
type: Protein
SIO_000068: ncbiprotein

position:199655:1
position: 199655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230330:1
position: 230330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199655-199687:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:199885-200051:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215024-215108:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230247-230330:1:exon

CYSTM1
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: CYSTM1
note: cysteine rich transmembrane module containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(231917..243008)
location: region:231917-243008:-1
so has part: feature:231917-243008:-1:exon
subclass of: SO_0000010

104304648
type: Gene
SIO_000068: ncbigene

position:231917:-1
position: 231917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243008:-1
position: 243008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231917-243008:-1:exon

CYSTM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: CYSTM1
product: cysteine rich transmembrane module containing 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_009905412.2
SIO_010081: CYSTM1
subclass of: SO_0000673
so part of: CYSTM1
location: complement(join(231917..232193,242757..243008))
location: region:231917-243008:-1
so has part: feature:242757-243008:-1:exon
so has part: feature:231917-232193:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:242757-243008:-1:exon

position:242757:-1
position: 242757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:231917-232193:-1:exon

position:232193:-1
position: 232193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CYSTM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: CYSTM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine-rich and transmembrane domain-containing protein 1
translation: MSYENPPPYPGPGPTAPYPPYAQQPGGPPGPYPGYPPGPTGPYQPGQPGYQGYPQYGWQNAPPPPPGPMYADGPKNTVYVVEERRRDDTGESACLTACWTALCCCCLWDMLT
SIO_010081: CYSTM1
subclass of: SO_0000673
so part of: CYSTM1
location: complement(join(232087..232193,242757..242988))
location: region:232087-242988:-1
so has part: feature:242757-242988:-1:exon
so has part: feature:232087-232193:-1:exon

XP_009903714.1
type: Protein
SIO_000068: ncbiprotein

position:232087:-1
position: 232087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242988:-1
position: 242988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242757-242988:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:232087-232193:-1:exon