Candidatus Vallotia cooleyia isolate 19-005_Vallotia plasmid unnamed, complete sequence.
type: Entry
definition: Candidatus Vallotia cooleyia isolate 19-005_Vallotia plasmid unnamed, complete sequence.
sequence version: NZ_CP047397.1
sequence date: 2023-03-23
sequence: sequence
division: CON
label: NZ_CP047397.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN13279436
keyword: RefSeq
source: Candidatus Vallotia cooleyia
organism: Candidatus Vallotia cooleyia
taxonomy: Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Candidatus Vallotia.
reference: 1
references: 34508228
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP047397.1.\nAnnotated using prokka 1.14.0 from\nhttps://github.com/tseemann/prokka.\nBacteria and source DNA available from Carol von Dohlen. Department\nof Biology, 5305 Old Main Hill, Utah State University, Logan, Utah\n84322 USA.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 2019\nAssembly Method :: Flye v. 2.6\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 1049.0x\nSequencing Technology :: PacBio Sequel II; Illumina NextSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/23/2023 03:51:24\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 891\nCDSs (total) :: 836\nGenes (coding) :: 796\nCDSs (with protein) :: 796\nGenes (RNA) :: 55\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 43\nncRNAs :: 3\nPseudo Genes (total) :: 40\nCDSs (without protein) :: 40\nPseudo Genes (ambiguous residues) :: 0 of 40\nPseudo Genes (frameshifted) :: 16 of 40\nPseudo Genes (incomplete) :: 29 of 40\nPseudo Genes (internal stop) :: 12 of 40\nPseudo Genes (multiple problems) :: 13 of 40\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 66104
topology: circular
so has quality: SO_0000988
location: 1..66104
location: region:1-66104:1
RO_0002162: 1177211

NZ_CP047397
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN13279436
type: BioSample
SIO_000068: biosample

1
title: Transitional genomes and nutritional role reversals identified for dual symbionts of adelgids (Aphidoidea: Adelgidae)
author: Dial, D.T.
author: Weglarz, K.M.
author: Aremu, A.O.
author: Havill, N.P.
author: Pearson, T.A.
author: Burke, G.R.
author: von Dohlen, C.D.
journal: ISME J
volume: 16
issue: 3
pages: 642-654
year: 2022
pubmed: 34508228

34508228
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Dial, D.T.
author: Burke, G.R.
author: Weglarz, K.M.
author: Havill, N.P.
author: von Dohlen, C.D.
journal: Submitted (07-JAN-2020) Department of Entomology, University of Georgia, 120 Cedar St, 419 Biological Sciences Building, Athens, GA 30602, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66104:1
position: 66104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-66104:1:source
so part of: sequence
organism: Candidatus Vallotia cooleyia
mol type: genomic DNA
isolate: 19-005_Vallotia
host: Adelges cooleyi
plasmid: unnamed
country: USA:Idaho, Franklin county, ID-36 through Emigration Canyon
collection date: 2019-07-23

1177211
type: Taxonomy
SIO_000068: taxonomy

GJV44_RS04305
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
locus tag: GJV44_RS04305
so part of: sequence
location: join(64272..66104,1..1563)
location: region:1-66104:1
so has part: feature:64272-66104:1:exon
so has part: feature:1-1563:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:64272-66104:1:exon

position:64272:1
position: 64272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-1563:1:exon

position:1563:1
position: 1563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GJV44_RS04305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
locus tag: GJV44_RS04305
EC number: 3.1.11.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013428658.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exodeoxyribonuclease V subunit gamma
translation: MLKLFYSNRYETLSAALLEDLNRRGGDLWQPQPIIVPNVAVRRRLELDYANLFGLCANIEFCHLAEWLWAQIARVDAIDMPQESPFLPERLVWRLYRLLVQRGTIQDSVGQSSLTRLDAYLTASDSVMIFDLSRRISAVFDRYMTYRSHWLAQWMEGASIFAPYRQNIDSKQFSEVTPIQHADEAWQAQLWRDVLNELAGVRDADADILKQVLPPEYRFLSVVSQFNLDDVKRADWPAQVSVFALPTMPPLHMQLLCELSRWIDVQIYVLIPCRKLWFDIVTQQCDGVLHAAGQPDYKTVGHPLLSEWGRQMQAQLVLLHQHTKGVVASENSEFVEATACSWLATIQNFILRLDHPVLPSPLPTRNGIEVHVCHSLMRQFEVLHDRLLAEFNSDSSLMPDEVLIVVPDLMVAAPIVNAVFGAVSSDDLRHIPYHITGLPSSKANLLARTLLEWLTLAENDVNASTLIEWLHVDAIAARYSIDPLALNTVQKWLFDAGARRLFAPSNQWNTNVPHSRNTFSDALMRLFLGYAMPDNSLPVGDWLPVAAPIGADAILLGRLAKFIDELDAFARACSIPHTVAQWRKLLFDALERFFDFFSSGVDALSQLLAAVFVQIEAGAPHTLLPAVVLRAALLSALDALVSGGVPSGAVTVSSLSGLRGVPFRIVCIAGIDADVFPSRSHEDEFNLMAAFSQPGDCQYRDNERNLFLDLILAARDTVLLSYTGRSIQDNTDLLPSALVTELLDHLALLKAGEGAVLDRIALARSGFITDHPLQPFALSYFSIEGPLLTYDEDRAQVASALSDPKKRIELDIIRPFFINMLPPDMRETIRLDEFLRFWHHPQRTILREQLGIILHRSQPLFPDNTAYKFDYVARDALSRRLLPLLIDSSAYADRAYEIARSIPELPGGATGRAMHEREIVALRKMAEYVQRRTGTKLETVDFSIRIIPSWPKNLKSVSVFLDLVPATQGAVLLPTVLTGALNTVKHDELVLYRYTKPTTYDYLDAWLRHLCWCAASPKASRKTLWIGEEERFVLTTPRDPHMHLGELIAMYRVGLRVPLRFFPKSAWLFVSKSESIAQNAWSNTRTGGEFADPAIQLVLRGMPSTLDDTFFAISKIVFEPLIAHMRLSEDT
SIO_010081: GJV44_RS04305
subclass of: SO_0000673
so part of: GJV44_RS04305
location: join(64272..66104,1..1563)
location: region:1-66104:1
so has part: feature:64272-66104:1:exon
so has part: feature:1-1563:1:exon

WP_226806940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64272-66104:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-1563:1:exon

GJV44_RS04310
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
gene: recB
locus tag: GJV44_RS04310
old locus tag: GJV44_p00002
so part of: sequence
location: 1563..5288
location: region:1563-5288:1
so has part: feature:1563-5288:1:exon
subclass of: SO_0000010

position:5288:1
position: 5288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1563-5288:1:exon

GJV44_RS04310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
gene: recB
locus tag: GJV44_RS04310
old locus tag: GJV44_p00002
EC number: 3.1.11.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013428657.1
GO component: GO:0009338 - exodeoxyribonuclease V complex [Evidence IEA]
GO function: GO:0008854 - exodeoxyribonuclease V activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exodeoxyribonuclease V subunit beta
translation: MTSKVPDLDVFACELDGITQIEASAGTGKTWNICALYIRLLIEKNLKADQILVVTFTKSATIELQDRIRALLMQIEEGVELDNPFITRLIGRIVDGEAPEITMQCTLKKIRRALHSFDQAAIYTIHSFCQRALQVAPFSAAMPFLFKTKADDTALLFDIAAQFWRNRVESEAARVPSFAHWLVSKGVGPAVLQALLAQRLKKPLADLVWTNPTCNASIDTTIDHFVHASNLWREELEQITQWLANCATHLNQRTHKPAQIQAALLAWEHFFARGDRYAAIPKDALKLTLSSLTTSAQARCKLMAHPFFDSADRLISAIREEQAIHLSHWFSLVREWLQIGPLSVVERHRTAQAISFDGLLSNLHNALHTHCWLSDALRERYPAALIDEFQDTDPLQFSIFRKIFATKGALFFVGDPKQAIYSFRAADLHTYLNARTYASARYMLSINQRSSPAMIAACNRLFSANPRAFMLDGLDYYPVRAGIRARPIFYDRHDMIGATSGSKAALRVWLLPDHIPLNKRDAEHVAAESCATEIARLMYDSRVGNVMIGTDLLTPANIAILVQTHRQGMLMKRVLHKFGIGSIELSKTSVFSSIDAEQCERVLLAIDTPSDFLRLRMALSTDWIGLDASALWDLKKGKPDAIEKQHNQLVVAGLDLASWVERFTGYKLLWQDRGFSAMWRIMMRELRIMIRLASAIDGERRLTDVNHLAELLQARDTEHPGIASTLFWLTIQRTDPSPRDETQLRLESDQDLVQIVTVYKSKGLEYPVVFCPFLTNGALRAGSGSTPNPLQMAREYYSDDGRAVLHFGCDGNEAQRIDRGMMREQAAERVRLIYVALTRAVYRCYLVAGVYKSGGYSSTKESRKSVLNWLVAGRSTDLDTWLHEPPETAALLAFWYSLSDNKDGSIVVMPIPTVEKRDLLSHPDVSHVDVRTRAPTRRLFDGWRTASFSSLVFDRRRLLPPIDDILHEKPAHEDYDLFQTDEQLIISNLPPIQNSALFGFTDDDILHFPRGLAAGNCLHRLMELADLCNPASWPTAIVRALSEQPVNSLELDAKRLSAMMIRLLRDLTHTPIEADFMLGDLDPLRRLTELEFVFPVSSLDMSQFSTMLEEHGITGVTLDDGILHGYMRGFIDSVVEFHSRFWIIDWKSNYLGNSHHAYRAHAISTVMDTHAYRLQALIYTIALHRHLKARLPGYDYDTHFGASLYLFLRGVRPDWPGAGIERFKPTRLAIEAFDALFSARK
SIO_010081: GJV44_RS04310
subclass of: SO_0000673
so part of: GJV44_RS04310
location: 1563..5288
location: region:1563-5288:1
so has part: feature:1563-5288:1:exon

WP_226806941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1563-5288:1:exon

GJV44_RS04315
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
locus tag: GJV44_RS04315
old locus tag: GJV44_p00003
so part of: sequence
location: 5352..7370
location: region:5352-7370:1
so has part: feature:5352-7370:1:exon
subclass of: SO_0000010

position:5352:1
position: 5352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7370:1
position: 7370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5352-7370:1:exon

GJV44_RS04315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
locus tag: GJV44_RS04315
old locus tag: GJV44_p00003
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013428656.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MTDIFLSKGFSRRIKMLAESLGSADDDAQIASAAAEMVSLATANGHVYVKLMALAQHLGHSADRVRASLLASGVVMCINDNELAPSLPLVIDSNNRLYLARYYEFERGLANALAALAQTQFDHVESDDSKRWYNILSRYFGEAGCHNLDWQRVAAAVALSGQLTIVSGGPGTGKTTTVIGILSCLIETNQDLRIALAAPTGKAAQHMLEALSSRKSQLACNIAAKMPTESYTLHRLLGSAPDRGFRYHHRNPLPYDVIVVDEASMIDIALASWLVDAISPSARLILLGDKDQLAAVEAGSVFAELSAYPCYIGHRGKSIAQALGCTAHALRNAFSAHANGVEYRTTCDTHNISPDRKKISCVFDDGNSEISTVELVQNNKAYVANSVQTTTLANCVVWLKTNYRFSLDSPIGALSSAIRDGLSTDALSILDIKNDRAPTYFIEDSGRVLGHAAREYIASGFSCYTNLLAEVLRNRELPVDLLFDALNKFRVLCAVRAGPYGTNFFNDWISAKLRRVIRFPINATTQWFSGRSIIVTRNNYELGLFNGDIGIAIPALDGVLRVVFKRGDGQLQSVFPAMLPPHDTAFALTVHKSQGSEFERAVLVLPATFSRALSRELIYTAVTRARSQITIIGTRAVLEQAIRTPTDRDTGLSLRLRYAVERAQQSETAPPL
SIO_010081: GJV44_RS04315
subclass of: SO_0000673
so part of: GJV44_RS04315
location: 5352..7370
location: region:5352-7370:1
so has part: feature:5352-7370:1:exon

WP_226806942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5352-7370:1:exon

GJV44_RS04320
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
gene: thiC
locus tag: GJV44_RS04320
old locus tag: GJV44_p00004
so part of: sequence
location: complement(7991..9922)
location: region:7991-9922:-1
so has part: feature:7991-9922:-1:exon
subclass of: SO_0000010

position:7991:-1
position: 7991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9922:-1
position: 9922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7991-9922:-1:exon

GJV44_RS04320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
gene: thiC
locus tag: GJV44_RS04320
old locus tag: GJV44_p00004
EC number: 4.1.99.17
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013697214.1
GO function: GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphomethylpyrimidine synthase ThiC
translation: MVVDIKFLSNSARVDNAAVTPLPNSHKIYVTGSRPDLRVPMREIRQADTPSGFGGEKNPPITVYDTSGPYTDPDVKIDIRIGLPALREAWIHERNDTEQLKIIPSQPSKDCVIKKDTKRLCFPGPTRATRRAQFGANVTQIYYARRGIITPEMEFVAIRENQRRHEYLESLRGSGPQGEKLAHLIGRQHSGNTFGATEFGGNQACEITPTFVRDEVARGRAIIPANINHPESEPMIIGRNFLVKINANIGNSAVTSSISEEVDKMTWAIRWGGDTVMDLSTGNNIHETREWIIRNSPVPVGTVPIYQALEKVHGKAEELTWEIFRNTLIEQAEQGIDYFTIHAGVLLRHIPMTASRMTGIVSRGGSIMAKWCLSHHRESFIYEHFEDICEIMKAYDVSFSLGDGLRPGSIYDANDEAQLAELKILGELTQIAWKHDVQTMIEGPGHVPMQLIKKNMDLQMEWCNEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLPNKDDVKEGIITYKLAAHAADLAKGHPGAQIRDNALSRARFEFRWEDQFNLGLDPEKARKLHDETLPKDSAKVAHFCSMCGPHFCSMKITQDVRKFAEQQGIGEVEALSQGMKVKAREFKHLGTEIYQKQ
SIO_010081: GJV44_RS04320
subclass of: SO_0000673
so part of: GJV44_RS04320
location: complement(7991..9922)
location: region:7991-9922:-1
so has part: feature:7991-9922:-1:exon

WP_226806956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7991-9922:-1:exon

GJV44_RS04325
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
locus tag: GJV44_RS04325
so part of: sequence
location: 10286..10735
location: region:10286-10735:1
so has part: feature:10286-10735:1:exon
subclass of: SO_0000010

position:10286:1
position: 10286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10735:1
position: 10735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10286-10735:1:exon

GJV44_RS04325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
locus tag: GJV44_RS04325
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIDIFSAKQEKDWNCMPIQSFEAWLAMQPGRNPGRPLRASTAKVYLAQWRSFIRYIEAHQIFLNTVTPNTINAFLSSLDYENRDQRARYRKLIERVFIAIRACTQQQQVNINPAVAALCDRHATWNKIHGNRDTIFFYHRTDIELLISY
SIO_010081: GJV44_RS04325
subclass of: SO_0000673
so part of: GJV44_RS04325
location: 10286..10735
location: region:10286-10735:1
so has part: feature:10286-10735:1:exon

WP_226806943.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10286-10735:1:exon

GJV44_RS04330
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
locus tag: GJV44_RS04330
so part of: sequence
location: 10741..11259
location: region:10741-11259:1
so has part: feature:10741-11259:1:exon
subclass of: SO_0000010

position:10741:1
position: 10741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11259:1
position: 11259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10741-11259:1:exon

GJV44_RS04330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
locus tag: GJV44_RS04330
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MNTHRIHWHKLRDRALVAVFLGAGLKVSQALNLTVNCINIGPNRLMHITTPGSRFSHQPRPEPFAQTLLARWLAERHISGIKSLWVFPGSKNGRRMHSVTALRATQEIILTSGVVDKRKARTSPQTLRNSYIAALFESGQTTLAVSEVLGIELITAERIKKAWERWIQEKSA
SIO_010081: GJV44_RS04330
subclass of: SO_0000673
so part of: GJV44_RS04330
location: 10741..11259
location: region:10741-11259:1
so has part: feature:10741-11259:1:exon

WP_239025385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10741-11259:1:exon

GJV44_RS04335
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
gene: rpsU
locus tag: GJV44_RS04335
old locus tag: GJV44_p00008
so part of: sequence
location: complement(11661..11873)
location: region:11661-11873:-1
so has part: feature:11661-11873:-1:exon
subclass of: SO_0000010

position:11661:-1
position: 11661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11873:-1
position: 11873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11661-11873:-1:exon

GJV44_RS04335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
gene: rpsU
locus tag: GJV44_RS04335
old locus tag: GJV44_p00008
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004202502.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S21
translation: MTTVIPKPNEPVEVALRRFRRSIESTGLIKELRARTAYEKPTAERKRKKAAAVARLRKLIRRSLPPRKLY
SIO_010081: GJV44_RS04335
subclass of: SO_0000673
so part of: GJV44_RS04335
location: complement(11661..11873)
location: region:11661-11873:-1
so has part: feature:11661-11873:-1:exon

WP_226806944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11661-11873:-1:exon

GJV44_RS04345
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
locus tag: GJV44_RS04345
old locus tag: GJV44_p00010
so part of: sequence
location: 15823..17046
location: region:15823-17046:1
so has part: feature:15823-17046:1:exon
subclass of: SO_0000010

position:15823:1
position: 15823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17046:1
position: 17046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15823-17046:1:exon

GJV44_RS04345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
locus tag: GJV44_RS04345
old locus tag: GJV44_p00010
EC number: 2.6.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011300619.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid aminotransferase
translation: MFEHVEAFPGDPILSLNEDFQVDPRANKVNLSIGMYFDAHGNLPLMAAVRDAENALASEIKAHPYLPMSGLPSYRDTVQQLVFGNACGARTQRLIATLQTLGGSGALKVGADFLRRIFPDAQVWISDPSWENHRVVFERAGFTVNTYPYYSSTTGGLCFDEMLHALRAIPQRHILLLHACCHNPTGVDLDRNQWREVILIIAKNKLLPFVDLAYQGFGVDLDDDAFAVRELTAHGLSCLVANSFSKNFSLYGERCGGLSVVCQSTNEASRVLGQLTGVVRANYSNPPTYGAKIVHRVLCTPALRALWQSELAAMCKRISAMRHLIYQRLRSYFADDKLSHYIRQRGMFTYTGLSAEQVNRLRIEHGVYLVRSGRMCIAGLNEQNVIVVADAIANVLLDRKKSKSSQI
SIO_010081: GJV44_RS04345
subclass of: SO_0000673
so part of: GJV44_RS04345
location: 15823..17046
location: region:15823-17046:1
so has part: feature:15823-17046:1:exon

WP_226806946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15823-17046:1:exon

GJV44_RS04350
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
locus tag: GJV44_RS04350
old locus tag: GJV44_p00012
so part of: sequence
location: complement(18971..19846)
location: region:18971-19846:-1
so has part: feature:18971-19846:-1:exon
subclass of: SO_0000010

position:18971:-1
position: 18971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19846:-1
position: 19846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18971-19846:-1:exon

GJV44_RS04350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
locus tag: GJV44_RS04350
old locus tag: GJV44_p00012
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013428378.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MTRTLPIPREAPTNTIFCAQSVTLNDDSSIAFSQMGMGEPIVLVHGSLCDYRYWGPQFVPLAATHRVLSLSLGHYFPTRELNCMLPFSWNTHVWQIAEFIDNVVCEPAHIIAHSRGAYLAFHLALRFPDCLRSITLADPGGAAQRRDVLASVQKEIGLINALHSRSVALIEQGELDYGLALFIDSVSSAGSWAKSPKSFKTMARDNAHTLRQQISEQMPDFSAHEAKQITLPVLLIGGEKSPSIFHRNIAWLHKNIDDARQITIAGASHGMNLANPYAFNRAVLEFINYKN
SIO_010081: GJV44_RS04350
subclass of: SO_0000673
so part of: GJV44_RS04350
location: complement(18971..19846)
location: region:18971-19846:-1
so has part: feature:18971-19846:-1:exon

WP_226806947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18971-19846:-1:exon

GJV44_RS04355
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
locus tag: GJV44_RS04355
old locus tag: GJV44_p00013
so part of: sequence
location: complement(19843..20085)
location: region:19843-20085:-1
so has part: feature:19843-20085:-1:exon
subclass of: SO_0000010

position:19843:-1
position: 19843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20085:-1
position: 20085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19843-20085:-1:exon

GJV44_RS04355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
locus tag: GJV44_RS04355
old locus tag: GJV44_p00013
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013428377.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: H-NS family nucleoid-associated regulatory protein
translation: MDEQKRQRIIAYIHRQMNEYDISIERLAEELAADEKKIKPILFRDAYGNVWDGEGSMPDWLKRAVHAGQSIKHFMVEPKQ
SIO_010081: GJV44_RS04355
subclass of: SO_0000673
so part of: GJV44_RS04355
location: complement(19843..20085)
location: region:19843-20085:-1
so has part: feature:19843-20085:-1:exon

WP_226806948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19843-20085:-1:exon

GJV44_RS04360
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
locus tag: GJV44_RS04360
old locus tag: GJV44_p00014
so part of: sequence
location: complement(21752..22168)
location: region:21752-22168:-1
so has part: feature:21752-22168:-1:exon
subclass of: SO_0000010

position:21752:-1
position: 21752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22168:-1
position: 22168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21752-22168:-1:exon

GJV44_RS04360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
locus tag: GJV44_RS04360
old locus tag: GJV44_p00014
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006397314.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HIT domain-containing protein
translation: MRYDSNNPFARILRGELPCVKVSETSSVLAFMDMMPEIDGHVLVVPKEAVSEIFDLPDEVGAACFQMVNRVATAVRDALKPGGILVAQFNGEAAGQTVPHVHFHIIPRHAGKELRLHARVVTTIDKIEAVAQRIRAKL
SIO_010081: GJV44_RS04360
subclass of: SO_0000673
so part of: GJV44_RS04360
location: complement(21752..22168)
location: region:21752-22168:-1
so has part: feature:21752-22168:-1:exon

WP_226806949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21752-22168:-1:exon

GJV44_RS04365
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
gene: ahpC
locus tag: GJV44_RS04365
old locus tag: GJV44_p00015
so part of: sequence
location: complement(23904..24467)
location: region:23904-24467:-1
so has part: feature:23904-24467:-1:exon
subclass of: SO_0000010

position:23904:-1
position: 23904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24467:-1
position: 24467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23904-24467:-1:exon

GJV44_RS04365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
gene: ahpC
locus tag: GJV44_RS04365
old locus tag: GJV44_p00015
EC number: 1.11.1.26
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017329783.1
GO function: GO:0102039 - NADH-dependent peroxiredoxin activity [Evidence IEA]
GO process: GO:0006979 - response to oxidative stress [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alkyl hydroperoxide reductase subunit C
translation: MSLINTQIKPFKSTAYHNGSFVTISEASLIGKWSVFVFYPADFTFVCPTELGDLADHYAEFQRLGVEIYGISTDTHFTHKAWHDSSETIAKIKYPLVGDPTAMLAHNFNVLVEEEGLALRGTFVINPERQIKLYEIHDNGIGRDAQELLRKVQAAQYVESHPGEVCPARWKPGAATLKPSLELVGKL
SIO_010081: GJV44_RS04365
subclass of: SO_0000673
so part of: GJV44_RS04365
location: complement(23904..24467)
location: region:23904-24467:-1
so has part: feature:23904-24467:-1:exon

WP_226806950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23904-24467:-1:exon

GJV44_RS04370
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
locus tag: GJV44_RS04370
old locus tag: GJV44_p00016
so part of: sequence
location: 25930..26433
location: region:25930-26433:1
so has part: feature:25930-26433:1:exon
subclass of: SO_0000010

position:25930:1
position: 25930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26433:1
position: 26433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25930-26433:1:exon

GJV44_RS04370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
locus tag: GJV44_RS04370
old locus tag: GJV44_p00016
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013429005.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fur family transcriptional regulator
translation: MFNTSSRIPTARTAPGSLPVADITQALQIAHAYCQERSELLTPLRKKVLSLLLQSGRATKAYTLLDEMRKIHPGSAPPTVYRALDFLQSVELVHRIESINAFSVCHDLTHCRHGILIVCQSCGEVAEVDGPGVHHELVNKIQSTGFTLVRGELELKGFCVKCTAKTM
SIO_010081: GJV44_RS04370
subclass of: SO_0000673
so part of: GJV44_RS04370
location: 25930..26433
location: region:25930-26433:1
so has part: feature:25930-26433:1:exon

WP_226806951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25930-26433:1:exon

GJV44_RS04375
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
locus tag: GJV44_RS04375
old locus tag: GJV44_p00017
so part of: sequence
location: 27284..28417
location: region:27284-28417:1
so has part: feature:27284-28417:1:exon
subclass of: SO_0000010

position:27284:1
position: 27284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28417:1
position: 28417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27284-28417:1:exon

GJV44_RS04375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
locus tag: GJV44_RS04375
old locus tag: GJV44_p00017
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013429003.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AGE family epimerase/isomerase
translation: MNQLHYPSVIIDNLQKHLTNIILPLWSTRGFNNILGLPYDAIASPGQPPLPTTRYRAIGCARQLYVFSSAGWHDHADRLFESLCSRFMDTKYGGWHYSINSQGEPKETQKDLYTHAFIVFSCAEYFRHQRNLDALNLLEDTLHVIQTRFSTNSGLYNAVLSADFMTIIKGPQQNPIMHLTEAYLSARDVKPDIWFFDTLRHIAEAVTATFVHRTTGCIAELPIGCGRLRIEPGHQFEWFYLTSCAQDVFGHSDLSRWLDSAYTFSFRHGVSPITGGVCTALDEHGYVTEPTERLWAQTEFARALATLQALHGTSKALDTHISLKTQLNHFKQRFLRNYGWIEAISQNSSAVRVDMPSTTPYHIATMYHAVSRLCTKL
SIO_010081: GJV44_RS04375
subclass of: SO_0000673
so part of: GJV44_RS04375
location: 27284..28417
location: region:27284-28417:1
so has part: feature:27284-28417:1:exon

WP_226806952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27284-28417:1:exon

GJV44_RS04380
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
gene: parA
locus tag: GJV44_RS04380
old locus tag: GJV44_p00018
so part of: sequence
location: 28799..29452
location: region:28799-29452:1
so has part: feature:28799-29452:1:exon
subclass of: SO_0000010

position:28799:1
position: 28799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29452:1
position: 29452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28799-29452:1:exon

GJV44_RS04380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
gene: parA
locus tag: GJV44_RS04380
old locus tag: GJV44_p00018
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013429001.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family partition ATPase
translation: METEIIAVTQQKGGVGKSTIAMHLGAAFHEKEKKVLLVDADGQNTLIRWSSTAKSGILFPVVNLAEAGAQIHREIKKFINDYDFIIVDCPPSITEKISGVVLLAASIAVVPISSSPADYWSSVGLVKLILQAQTMNKALQAVFLLNKTDKRRMLTRELKRPLEKLGFPLLKTQIPTRECYKQAMALGKTVLQMSDRSAQLAGAEIRACANEIAALLK
SIO_010081: GJV44_RS04380
subclass of: SO_0000673
so part of: GJV44_RS04380
location: 28799..29452
location: region:28799-29452:1
so has part: feature:28799-29452:1:exon

WP_226806953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28799-29452:1:exon

GJV44_RS04385
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
locus tag: GJV44_RS04385
old locus tag: GJV44_p00019
so part of: sequence
location: 29476..30582
location: region:29476-30582:1
so has part: feature:29476-30582:1:exon
subclass of: SO_0000010

position:29476:1
position: 29476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30582:1
position: 30582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29476-30582:1:exon

GJV44_RS04385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
locus tag: GJV44_RS04385
old locus tag: GJV44_p00019
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013429000.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MKSSQLARGFQACPDTISSNKQTTLDRLNAIETLVKQSVHINTLEPNFTTYKHQACHIPDEDTTSPGPNESPAYFAWRTENKYTPGQIIDLSLKSIKPSPFNPRYFYLKSSISELAVNLSKQGQQQAIHVIPDQKIPGTFFVSDGGRRIRALKATNKESVRAIVIDLPIGIESYKLGYDLNVQRDSQTIFDNAIVWQRFLNEKRFHNQRELAEHLGIDESTVAVALGISKLPEFVMLEMMTRSDRFGSNMAYHVARYFSEKGTDCTLRLINKIINDGLSTRQVADIVKGRAIPSEKLKPLRRQRYTQRLEIKVDGETLGDLKSYSDDRLELKLRGLTRNKRDKLLSQIEAILMPKTEDLKSDLNTIDV
SIO_010081: GJV44_RS04385
subclass of: SO_0000673
so part of: GJV44_RS04385
location: 29476..30582
location: region:29476-30582:1
so has part: feature:29476-30582:1:exon

WP_226806954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29476-30582:1:exon

GJV44_RS04390
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
locus tag: GJV44_RS04390
old locus tag: GJV44_p00020
so part of: sequence
location: complement(30617..31966)
location: region:30617-31966:-1
so has part: feature:30617-31966:-1:exon
subclass of: SO_0000010

position:30617:-1
position: 30617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31966:-1
position: 31966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30617-31966:-1:exon

GJV44_RS04390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
locus tag: GJV44_RS04390
old locus tag: GJV44_p00020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013428999.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MATRASKKKTDVVSQNSSELRKAVEAIAIQPKSGKITLLTRKLFNVLLAVAQQADESGDTYRALLSDIVVNSAFDSNDTALVKEHLRRMVSVQVEWSTGTSSQKPGRKWGISTLIADAEILEDTTTRRVWVEFSFAPKIKKKLLDPVQYARLSLQFQSQLRSSAGLALYEICVRYLTNPSHLTMREPWGWWRPILSGTPDSKAIDEAKREYKYFKRDYLRSAIAEVNSVTNINVELIEHREGRRVSEIQFRVVERKQPILAFDVHPNVFDSTLVDRMVGLGIPLKEAKILYGDNEEGRVQAALQMTEQRIRSTTLPVVRSAAALFKDALKKGYAPPLDEVRAPQVKRMDRGEDPKTRLLTEYAAYRRRQARELYEEQDDTEQELSRELFEDETLRGLGAHLRDEWRKRGVSSKIAEIAFFDWLALKTWGEPTDGDLLAFTLNHERTLND
SIO_010081: GJV44_RS04390
subclass of: SO_0000673
so part of: GJV44_RS04390
location: complement(30617..31966)
location: region:30617-31966:-1
so has part: feature:30617-31966:-1:exon

WP_226806955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30617-31966:-1:exon

GJV44_RS04395
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
locus tag: GJV44_RS04395
old locus tag: GJV44_p00021
so part of: sequence
location: 33609..34367
location: region:33609-34367:1
so has part: feature:33609-34367:1:exon
subclass of: SO_0000010

position:33609:1
position: 33609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34367:1
position: 34367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33609-34367:1:exon

GJV44_RS04395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
locus tag: GJV44_RS04395
old locus tag: GJV44_p00021
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013428913.1
GO function: GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4'-phosphopantetheinyl transferase superfamily protein
translation: MNKNAMHATATNLLRPAGRWPDDVMLWHVQIPLSPAAWNWLQVCLPDDEQKRALRYRHNDDRLRFAATRAILRILLARHTGSAPLSLCFSSGAFGRPELAGYGETLSFNVTHAGQHALIAISEQRCIGVDIEFIRRVIAWKALLETVCTDAEQRALSARDYISGAQGFLRCWTAKEAALKAIGVGIWCGVQRVSVDPFADGAQYIDPPAISAWNNISALHLHWVDDLSDYIGCIAFGPPGSVSTRLRKSTLC
SIO_010081: GJV44_RS04395
subclass of: SO_0000673
so part of: GJV44_RS04395
location: 33609..34367
location: region:33609-34367:1
so has part: feature:33609-34367:1:exon

WP_226806931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33609-34367:1:exon

GJV44_RS04400
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
locus tag: GJV44_RS04400
old locus tag: GJV44_p00023
so part of: sequence
location: 36916..38646
location: region:36916-38646:1
so has part: feature:36916-38646:1:exon
subclass of: SO_0000010

position:36916:1
position: 36916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38646:1
position: 38646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36916-38646:1:exon

GJV44_RS04400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
locus tag: GJV44_RS04400
old locus tag: GJV44_p00023
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017329651.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation:proton antiporter
translation: MPHDISLITLIATGLGLAMILGYAVSWLSMPPLVGYLVAGVLCGPATPGFVGDIALAGQLAEIGVMLLMFGVGLHFSLDDLLAVKRIAVPGAIFQIVVATALGMGTAMWWGWPIGVSLVFGLALSVASTVVLLRALEARSQLDSANGRIAVGWLIVEDLLMVLILVLLPPLAGLLGGSPDGHHIIAGLTEVHSAIPQPRLWAMVGVTCAKVAAFIALMLVVGRRVFPRLLFLVARTGSRELFTLCVIVAAVGVAYGSSRLFDVSFALGAFFAGMMMRESEFSHRAADQTLPLRDAFSVLFFVSVGMLFDPHVLLNAPLHVLGVVAIIMLGKTLAAVALVLAFRYPLNSALTVGASLAQIGEFSFILAGLGMSLGLLPKEGQDLILAGSLISISLNSLVFAAVEPAQAWIRSRSSLARRMECREDPLAALPMTVPQAHLTGQVVIVGYGRVGRRIAQTLATHRISYVVAEQHRDIVEKLRAEQVPAVCGNASDPIVLVQAHVARAGMLVVTLPDTFDVRKIVDIARMVNPSIEAVLCTDNDDEAELLKSEQVGTVFVGDRELAHGMSLHVLSRMTGS
SIO_010081: GJV44_RS04400
subclass of: SO_0000673
so part of: GJV44_RS04400
location: 36916..38646
location: region:36916-38646:1
so has part: feature:36916-38646:1:exon

WP_226806932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36916-38646:1:exon

GJV44_RS04405
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
gene: shc
locus tag: GJV44_RS04405
old locus tag: GJV44_p00024
so part of: sequence
location: complement(39104..41101)
location: region:39104-41101:-1
so has part: feature:39104-41101:-1:exon
subclass of: SO_0000010

position:39104:-1
position: 39104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41101:-1
position: 41101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39104-41101:-1:exon

GJV44_RS04405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
gene: shc
locus tag: GJV44_RS04405
old locus tag: GJV44_p00024
EC number: 5.4.99.17
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015603023.1
GO function: GO:0051007 - squalene-hopene cyclase activity [Evidence IEA]
GO process: GO:0019746 - hopanoid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: squalene--hopene cyclase
translation: MFYKPLNPDITDTPTEHTSTPLLTERLEHAIRSATNALLAAQYDDGHWVFELEADATITAEYVLMVHYLGETPDSILEKKIGTYLRRIQGKHGGWPLFHDGDFDMNVSVKAYFALKMIGDPPDAPHMKHAHDAILAHGGAAKSNVFTRILLALYGVLDWCAVPMMPVEIMLLPRWFPFHLSKVSYWSRTVLVPLLVLQAKRPRARNPHGIGIDEIFVGSPRNVGPISRALHQNQGWFLFFSIIDVLLRRFDRFFPKHSRQKAIDAAAHFVEERLNGEDGLGAIFLAMVYSVLMYDVLGYPPDHPHRAIARKSINKLLVIHDNEAYCQPCLSPVWDTALTAHALIETGEQRAIEHAARGLDWLLPLQILETRGDWISRRANVRPGGWAFQFSNPYYPDVDDTAVVVMAMDRMEKLQVRKNYSNAINRACEWVVGMQSYSGGWGAFEPENTHLYLNNIPFSDHGALLDPPTADVSARCLSMLSQLSSTPQRQMSASRAKQYLIADQQDNGSWYGRWGMNYIYGTWSALCGLRAAGITPDTLLMRRAAQWLRSIQNPDGSWGENGDSYTLNYCGHKRSTSTASQTAWALLGLMSAGCAQDAAVARGVAYLLNTQNDEGLWDELLFTATGFPRVFYLRYHGYRKFFPLWALARYRNLTVRNECTVACGI
SIO_010081: GJV44_RS04405
subclass of: SO_0000673
so part of: GJV44_RS04405
location: complement(39104..41101)
location: region:39104-41101:-1
so has part: feature:39104-41101:-1:exon

WP_226806933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39104-41101:-1:exon

GJV44_RS04410
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
gene: hpnD
locus tag: GJV44_RS04410
old locus tag: GJV44_p00025
so part of: sequence
location: complement(41166..41930)
location: region:41166-41930:-1
so has part: feature:41166-41930:-1:exon
subclass of: SO_0000010

position:41166:-1
position: 41166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41930:-1
position: 41930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41166-41930:-1:exon

GJV44_RS04410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
gene: hpnD
locus tag: GJV44_RS04410
old locus tag: GJV44_p00025
EC number: 2.5.1.103
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012563810.1
GO function: GO:0016767 - geranylgeranyl-diphosphate geranylgeranyltransferase activity [Evidence IEA]
GO process: GO:0016117 - carotenoid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: presqualene diphosphate synthase HpnD
translation: MRILPKAQREGMYEIYSFCHQVDNVADSGMSREHKLTILSQWRSKIAALYVGNIGTQLEPLSRVVQRFSLRQNDFIAIIDGMEMDVVNTVVAPDRNTLDLYCDRVASAVGRLSVKVFGMPDDDGLKLAHHLGRALQLTNILRDIDEDAAVGRFYLPRDMLVEAGLTHLTPYSICDESLDRACAPLIANAREHFSQATKIMRQYPRYVVIAPRIMAQVYYALLKQLVQRGFAVPRKPVRVSRTSLMLAIVKHYLF
SIO_010081: GJV44_RS04410
subclass of: SO_0000673
so part of: GJV44_RS04410
location: complement(41166..41930)
location: region:41166-41930:-1
so has part: feature:41166-41930:-1:exon

WP_239025384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41166-41930:-1:exon

GJV44_RS04415
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
gene: glpK
locus tag: GJV44_RS04415
old locus tag: GJV44_p00026
so part of: sequence
location: 45223..46719
location: region:45223-46719:1
so has part: feature:45223-46719:1:exon
subclass of: SO_0000010

position:45223:1
position: 45223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46719:1
position: 46719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45223-46719:1:exon

GJV44_RS04415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
gene: glpK
locus tag: GJV44_RS04415
old locus tag: GJV44_p00026
EC number: 2.7.1.30
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013428771.1
GO function: GO:0004370 - glycerol kinase activity [Evidence IEA]
GO process: GO:0006071 - glycerol metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol kinase GlpK
translation: MEAKYVLALDQGTTSSRAIVFNHDGNVISTAQKELRQIYPQPGWVEHNPQEIWSTQAGVAAEAVVRAGLNGGSIHALGITNQRETTIVWDRNTGLPVYNAIVWQDRRTADLCVELKERELEGLVRAKTGLPIDSYFSATKIRWILDNVAGARKRAKQGELAFGTVDSWLMWNFTRHKTHATDMTNASRTMLFNIHTLEWDDELLAVLEIPRSMMPRVQPSSWLYESTQTTVFASRIPIAGVAGDQQAALFGQMCTTPGMVKNTYGTGCFLVMNTGDKPIESHNNLVTTIAWQIDGKITYALEGSIFIGAAVVQWLRDGLGIIKRASDIESLAASVPHNDGVFFVPAFAGLGAPHWNPNARGTLFGATRGTTAAHIARAALDSIVHQSFDVLRAMEVDAGQLITELRVDGGASKNNLLMQFQADLLGVEVVRPCVTETTALGVAYLAGLATGYWNGIDEIQDQWQLDRRFIPALESEEMARHRAGWQRAVSAAIMWAAS
SIO_010081: GJV44_RS04415
subclass of: SO_0000673
so part of: GJV44_RS04415
location: 45223..46719
location: region:45223-46719:1
so has part: feature:45223-46719:1:exon

WP_226806934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45223-46719:1:exon

GJV44_RS04420
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
locus tag: GJV44_RS04420
old locus tag: GJV44_p00027
so part of: sequence
location: 46744..47511
location: region:46744-47511:1
so has part: feature:46744-47511:1:exon
subclass of: SO_0000010

position:46744:1
position: 46744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47511:1
position: 47511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46744-47511:1:exon

GJV44_RS04420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
locus tag: GJV44_RS04420
old locus tag: GJV44_p00027
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010101791.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MIP/aquaporin family protein
translation: MNALISEFIGTSILILLGDGVVANVMLRGTKGQNSGLIVPTVGWAMAVFVGVICSASYSGAHLNPAVSVALAVSGKLAWAKVLPYCAAQMLGGMFGAFLVWLIYRKHFESTNCADTKLAVFCTGSAIRNKLSNLTSEIVATFVLVYSVLNMAAPSVGLGAINALPVALVVLGIGVSLGGTTGYAMNPARDLSPRIVHALLPISGKRNSDWGYAWVPVIGSLAGGILASAVSMYHRIEEIRLLAKQAISQIAILSL
SIO_010081: GJV44_RS04420
subclass of: SO_0000673
so part of: GJV44_RS04420
location: 46744..47511
location: region:46744-47511:1
so has part: feature:46744-47511:1:exon

WP_226806959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46744-47511:1:exon

GJV44_RS04425
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
locus tag: GJV44_RS04425
old locus tag: GJV44_p00029
pseudo: true
so part of: sequence
location: 49145..>49633
location: region:49145-49633:1
so has part: feature:49145-49633:1:exon
subclass of: SO_0000010

position:49145:1
position: 49145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49633:1
position: 49633
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49145-49633:1:exon

GJV44_RS04425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
locus tag: GJV44_RS04425
old locus tag: GJV44_p00029
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004550412.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: flavin reductase family protein
SIO_010081: GJV44_RS04425
subclass of: SO_0000673
so part of: GJV44_RS04425
location: 49145..>49633
location: region:49145-49633:1
so has part: feature:49145-49633:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49145-49633:1:exon

GJV44_RS04430
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
gene: argG
locus tag: GJV44_RS04430
old locus tag: GJV44_p00030
so part of: sequence
location: 50585..51946
location: region:50585-51946:1
so has part: feature:50585-51946:1:exon
subclass of: SO_0000010

position:50585:1
position: 50585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51946:1
position: 51946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50585-51946:1:exon

GJV44_RS04430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
gene: argG
locus tag: GJV44_RS04430
old locus tag: GJV44_p00030
EC number: 6.3.4.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018434607.1
GO function: GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO process: GO:0006526 - arginine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: argininosuccinate synthase
translation: MTTILQQLPRGQRVGIAFSGGLDTSAALHWMRLKGAVPYAYTAILGQPDEIDYNDIPRRAKQYGAENARLIDCRAQLVEEGFSALQCSAFHISTASVTYFNTTPLGRAVTGTMLVAAMQEDDVNIWGDGSTFKGNDIERFYRYGLLVNPGLRIYKPWLDQAFIDELGGRSEMSEFMRQAGFHYRMSADKAYSTDSNILGATHEAKDLEQLDTSIRIVDPIMGIASWRDDVQIAREDVTVQFDQGTPVAINGLEFSSGVELLLEANRIGGQHGLGVSDQIENRIIEAKSRGIYEAPGLALLYIAYDRLVTGIHNEDTIDQYRDNGRRLGRLLYQGRWFDPQAIMLREASKRWVARAITGQVTIELRRGNDYSIINTESPYLTYKPDRLTMERGKLTFSPLDRIGQLTMRNLDIADTRDMLQIYAKTGVFGEKREIISFPRLEKNKEQIANTVSD
SIO_010081: GJV44_RS04430
subclass of: SO_0000673
so part of: GJV44_RS04430
location: 50585..51946
location: region:50585-51946:1
so has part: feature:50585-51946:1:exon

WP_226806935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50585-51946:1:exon

GJV44_RS04435
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
locus tag: GJV44_RS04435
old locus tag: GJV44_p00031
so part of: sequence
location: complement(52597..54252)
location: region:52597-54252:-1
so has part: feature:52597-54252:-1:exon
subclass of: SO_0000010

position:52597:-1
position: 52597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54252:-1
position: 54252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52597-54252:-1:exon

GJV44_RS04435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
locus tag: GJV44_RS04435
old locus tag: GJV44_p00031
EC number: 3.6.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013428677.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MTSNSTSSYYHKAPAVPTPTSGTTPATPKPTVIGAHPEPTVVSAAVDNAPRNNTPSENSFIALGLSPEIASTVTAAGYHTPTPVQQRAIPAALDGHDLVVSSPTGSGKTAAFMLPAIERFTQMQRTGTVRQPTHHVQRGDRSDRRYRREQPVARPALLILTPTRELAMQVTVAATTYGKHLHRLRTVSILGGVPYGQQLMLLSKNPEILVATPGRLIDHLEHGRIDLSQLQMLVLDEADRMLDMGFIEDIESIINRTPATRQTLLFSATLDGKVGLLARRFLSNAKRIEIGCEPESRVNITQSVHYVDDRAHKDRLLTHMLSDSTLDQAIVFTATKNDADVIAARLAEDGFSSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDIPGITHVFNYDLPKFVEDYVHRIGRTGRAGRSGIAISLVQHAEAGILKRIERFVRTPLLVSVVAGLEPKRTSSMHTPVRRGIPPRSHSRSSGIHQGRGANNNYGNSRHNATGVSSRDASYRGGFGDVRTVRENDRNRFLDSPKPIRRRDNDRRTTSRYDD
SIO_010081: GJV44_RS04435
subclass of: SO_0000673
so part of: GJV44_RS04435
location: complement(52597..54252)
location: region:52597-54252:-1
so has part: feature:52597-54252:-1:exon

WP_226806936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52597-54252:-1:exon

GJV44_RS04440
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
gene: tsaB
locus tag: GJV44_RS04440
old locus tag: GJV44_p00033
so part of: sequence
location: 55020..55784
location: region:55020-55784:1
so has part: feature:55020-55784:1:exon
subclass of: SO_0000010

position:55020:1
position: 55020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55784:1
position: 55784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55020-55784:1:exon

GJV44_RS04440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
gene: tsaB
locus tag: GJV44_RS04440
old locus tag: GJV44_p00033
EC number: 2.3.1.234
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011549519.1
GO function: GO:0003725 - double-stranded RNA binding [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
translation: MAAMIPKALLALDTSTDFCSVAVLYLKHASSVPCVISRHEYTGPVSGIRVLPAVREVLGEAKLVLADCEAVAFGAGPGSFTGLRIAAGVSQGLAFGLGIPVVPICTLLACAERARESDSDARRLLVALDARMGGVYWADFVWDDVLDDWRVYHPAALSAPDSVPVPDEPFTLAGNASSVFGDALCVATRARVIDSYAMPHAHSLAIVGWYAFMAGRSFPARLAIPEYVRDTVAKTISERAMEFAIKDPCRKSNE
SIO_010081: GJV44_RS04440
subclass of: SO_0000673
so part of: GJV44_RS04440
location: 55020..55784
location: region:55020-55784:1
so has part: feature:55020-55784:1:exon

WP_226806960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55020-55784:1:exon

GJV44_RS04445
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
gene: rimI
locus tag: GJV44_RS04445
old locus tag: GJV44_p00034
pseudo: true
so part of: sequence
location: 55791..>56243
location: region:55791-56243:1
so has part: feature:55791-56243:1:exon
subclass of: SO_0000010

position:55791:1
position: 55791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56243:1
position: 56243
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55791-56243:1:exon

GJV44_RS04445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
gene: rimI
locus tag: GJV44_RS04445
old locus tag: GJV44_p00034
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011205143.1
GO function: GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ribosomal protein S18-alanine N-acetyltransferase
SIO_010081: GJV44_RS04445
subclass of: SO_0000673
so part of: GJV44_RS04445
location: 55791..>56243
location: region:55791-56243:1
so has part: feature:55791-56243:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55791-56243:1:exon

GJV44_RS04450
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
locus tag: GJV44_RS04450
old locus tag: GJV44_p00035
so part of: sequence
location: 56395..57483
location: region:56395-57483:1
so has part: feature:56395-57483:1:exon
subclass of: SO_0000010

position:56395:1
position: 56395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57483:1
position: 57483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56395-57483:1:exon

GJV44_RS04450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
locus tag: GJV44_RS04450
old locus tag: GJV44_p00035
EC number: 3.2.2.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013428674.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uracil-DNA glycosylase
translation: MENLDAILEELGITSFWIYFNIGHDLRPIETGGSTSPPPLIDVGQKIGCVMPSQPIQETDVTVVQVHETQESAVCSLIQDIQSPPSKLTRAEAEETLTDSTPTWEERSIFKTVDASETLDKVKAKKIVGSAIEVSNTKHVAATLVGPAHAKLNIISKQTSEVSLGAALAEQPVLMLDWKALKARVTSCTLCSLCKQRTNTVFGVGDEAADWMLVGEAPGENEDKQGEPFVGPAGQLLNNMLLALQLQRGDNVYIANVLKCRPPKNRNPKPDEVMRCELYLQRQVALVRPVVIIALGCFAAQSLLKMNANISFFRGRVHEYVGIPVVVTYHPAYLLRSLDDKHKAWSDLCLARKVYRQHSVIH
SIO_010081: GJV44_RS04450
subclass of: SO_0000673
so part of: GJV44_RS04450
location: 56395..57483
location: region:56395-57483:1
so has part: feature:56395-57483:1:exon

WP_226806937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56395-57483:1:exon

GJV44_RS04455
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
gene: thiD
locus tag: GJV44_RS04455
old locus tag: GJV44_p00037
so part of: sequence
location: complement(57889..58695)
location: region:57889-58695:-1
so has part: feature:57889-58695:-1:exon
subclass of: SO_0000010

position:57889:-1
position: 57889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58695:-1
position: 58695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57889-58695:-1:exon

GJV44_RS04455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
gene: thiD
locus tag: GJV44_RS04455
old locus tag: GJV44_p00037
EC number: 2.7.1.49
EC number: 2.7.4.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010104676.1
GO function: GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
translation: MNNMIPNVLTIAGSDPSGGAGIQADIKTLSALGAYSAAVITALTAQNTRGVTAVHPISSRIVAEQLDAVFSDLQIDAVKIGMLANVEIICTVAAAIERYQPKYIVLDTVILSSNGHLLLEPDSLSVLRERLLPLASIITPNLYESAVLLDQPIAENEAQMASQGDALQALGVYAVLLKGGHLSGLCSPDWLIEDFCHTRLVTNRVSVAGTHGTGCTLSSAMAALRPQRLNWVTTVCDAKIYLTQALMHSTRISVGHGTGPLHHCYSWW
SIO_010081: GJV44_RS04455
subclass of: SO_0000673
so part of: GJV44_RS04455
location: complement(57889..58695)
location: region:57889-58695:-1
so has part: feature:57889-58695:-1:exon

WP_226806961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57889-58695:-1:exon

GJV44_RS04460
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
gene: alr
locus tag: GJV44_RS04460
old locus tag: GJV44_p00038
so part of: sequence
location: 59791..60861
location: region:59791-60861:1
so has part: feature:59791-60861:1:exon
subclass of: SO_0000010

position:59791:1
position: 59791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60861:1
position: 60861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59791-60861:1:exon

GJV44_RS04460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
gene: alr
locus tag: GJV44_RS04460
old locus tag: GJV44_p00038
EC number: 5.1.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017331722.1
GO function: GO:0008784 - alanine racemase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alanine racemase
translation: MPRPLLATIHTAALANNLAVARRCAPKSKLLAVVKANAYGHGLASSFQGLCSTDGFGLLDLEEAVKLREIGWVGPILLLEGGSRQTDIDMIDRYSLTTTVHCDEQLRILEMARLSKPVNIHLKMNSGMNRLGYAAGKYRAAWERARSCPSIGQITLMTHFSDAESEIGILNQLDVFEHGANGIMGSRSLSNSAATLWHPNAHFDWIRPGIMLYGASPSGLSSGIKGLSLQPAMTLSSELIAVQTIDPGGSVGYGSTFKARERMRIGVVACGYADGYARCAPEGTPVQVDGVQTQIVGRVSMDMLTVDLSLCPHANIGSPVELWGVHVPIDDVAVACGTIGYELMCAITQRVPMYIE
SIO_010081: GJV44_RS04460
subclass of: SO_0000673
so part of: GJV44_RS04460
location: 59791..60861
location: region:59791-60861:1
so has part: feature:59791-60861:1:exon

WP_226806938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59791-60861:1:exon

GJV44_RS04465
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
locus tag: GJV44_RS04465
old locus tag: GJV44_p00039
so part of: sequence
location: complement(61125..61397)
location: region:61125-61397:-1
so has part: feature:61125-61397:-1:exon
subclass of: SO_0000010

position:61125:-1
position: 61125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61397:-1
position: 61397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61125-61397:-1:exon

GJV44_RS04465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
locus tag: GJV44_RS04465
old locus tag: GJV44_p00039
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008350541.1
GO function: GO:0005506 - iron ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oxidative damage protection protein
translation: MARIIHCAKLCQEAEGLDYPPLPGEIGRRIYEHISREIWQTWIQKQTILINENRLNMADPKARQYLLQQAEKFFFGEGIDVVSRYMPPVN
SIO_010081: GJV44_RS04465
subclass of: SO_0000673
so part of: GJV44_RS04465
location: complement(61125..61397)
location: region:61125-61397:-1
so has part: feature:61125-61397:-1:exon

WP_226806939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61125-61397:-1:exon

GJV44_RS04470
type: Gene
subclass of: SO_0000704
RO_0002162: 1177211
locus tag: GJV44_RS04470
pseudo: true
so part of: sequence
location: complement(61471..62442)
location: region:61471-62442:-1
so has part: feature:61471-62442:-1:exon
subclass of: SO_0000010

position:61471:-1
position: 61471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62442:-1
position: 62442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61471-62442:-1:exon

GJV44_RS04470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1177211
locus tag: GJV44_RS04470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006051235.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: GJV44_RS04470
subclass of: SO_0000673
so part of: GJV44_RS04470
location: complement(61471..62442)
location: region:61471-62442:-1
so has part: feature:61471-62442:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61471-62442:-1:exon