Agrobacterium fabrum strain 1D132 plasmid pAt1D132b, complete sequence.
type: Entry
definition: Agrobacterium fabrum strain 1D132 plasmid pAt1D132b, complete sequence.
sequence version: NZ_CP033025.1
sequence date: 2023-03-29
sequence: sequence
division: CON
label: NZ_CP033025.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN10169588
keyword: RefSeq
source: Agrobacterium fabrum
organism: Agrobacterium fabrum
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP033025.1.\nBacteria and source DNA available from Erh-Min Lai.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: AllPaths v. 52188\nAssembly Name :: agro05.04\nGenome Coverage :: 610x\nSequencing Technology :: Illumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/29/2023 12:03:09\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,210\nCDSs (total) :: 5,139\nGenes (coding) :: 5,068\nCDSs (with protein) :: 5,068\nGenes (RNA) :: 71\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 55\nncRNAs :: 4\nPseudo Genes (total) :: 71\nCDSs (without protein) :: 71\nPseudo Genes (ambiguous residues) :: 0 of 71\nPseudo Genes (frameshifted) :: 43 of 71\nPseudo Genes (incomplete) :: 45 of 71\nPseudo Genes (internal stop) :: 11 of 71\nPseudo Genes (multiple problems) :: 26 of 71\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 147633
topology: circular
so has quality: SO_0000988
location: 1..147633
location: region:1-147633:1
RO_0002162: 1176649

NZ_CP033025
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN10169588
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Agrobacterium fabrum 1D132
author: Cho, S.-T.
author: Tsai, Y.-M.
author: Huang, Y.-Y.
author: Chen, L.-Y.
author: Kuo, C.-H.
journal: Unpublished

2
title: Direct Submission
author: Cho, S.-T.
author: Tsai, Y.-M.
author: Huang, Y.-Y.
author: Chen, L.-Y.
author: Kuo, C.-H.
journal: Submitted (09-OCT-2018) Institute of Plant and Microbial Biology, Academia Sinica, 128 Sec. 2, Academia Rd, Taipei 11529, Taiwan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147633:1
position: 147633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-147633:1:source
so part of: sequence
organism: Agrobacterium fabrum
mol type: genomic DNA
strain: 1D132
host: Prunus sp.
plasmid: pAt1D132b
country: USA: Contra Costa, CA

1176649
type: Taxonomy
SIO_000068: taxonomy

At1D132_RS25585
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
gene: repA
locus tag: At1D132_RS25585
old locus tag: At1D132_48730
so part of: sequence
location: 1..1191
location: region:1-1191:1
so has part: feature:1-1191:1:exon
subclass of: SO_0000010

39477013
type: Gene
SIO_000068: ncbigene

position:1191:1
position: 1191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1191:1:exon

At1D132_RS25585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
gene: repA
locus tag: At1D132_RS25585
old locus tag: At1D132_48730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018009855.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepA
translation: MSITLQNRFDIEIAQQGSKISSALHMLRSQQYPPDARKGLRKFQLAEVADFMGVTQTHLRQLHSDGKGPEIESVSGRRYYTADQMLELRDYLEANKKSDKRYYVPRRREGEAIQVVSVVNFKGGSGKTTTAAHLAQYLALTGHRVLAVDLDPQASLTSLFGIQPELDDTASLYEALRFDDERKSIADVIQPTNIPGLDVVPANLVLQEYEYDVPLAISSKKGEDGRLFYMRIASALKQVDNKYDVVVIDCPPQLGYLTITALMASTGILITIHPQMLDIMSMSQFLMMLGGIMGPVAEAGAEMRVQWFRYLITRFEPTDIPQAQMVGFMQSMFAQQMLRNHVLKSTAISDASIKKQTLYEVERGEFVRSTYDRAIESLNSANAEIVELIHGVWGRK
SIO_010081: At1D132_RS25585
subclass of: SO_0000673
so part of: At1D132_RS25585
location: 1..1191
location: region:1-1191:1
so has part: feature:1-1191:1:exon

WP_121652045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1191:1:exon

At1D132_RS25590
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
gene: repB
locus tag: At1D132_RS25590
old locus tag: At1D132_48740
so part of: sequence
location: 1276..2271
location: region:1276-2271:1
so has part: feature:1276-2271:1:exon
subclass of: SO_0000010

39476989
type: Gene
SIO_000068: ncbigene

position:1276:1
position: 1276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2271:1
position: 2271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1276-2271:1:exon

At1D132_RS25590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
gene: repB
locus tag: At1D132_RS25590
old locus tag: At1D132_48740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006312309.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepB
translation: MSRENPFAKLDMAAISASQTPTKPGYGMTGAAKTVVRSIEDMAENTKKLMEGEVIVDLDPQLIDVSFVSDRLSDDGEEFQELLQAIRESGQTTPILVRPNSTDAKRYMVVFGHRRLRVARELGVPVKAIVKQLDDTTSAIVQGQENAARSNLSFIERAYFAQNLIGSGMTKETVRSSLAIDEAMLSKMLAVVEAVPGSVITALGASKKIGRDRWLSLRQLVLAPALSKVAVEFSESAEFRELPENERFDRLHDYLKRYKSKSAAKMPKAQVPVRDWTSTDRALNMVMNSKAKKVAIELTNVEARPFSEWLSSHMGRLYEEYKGSKTETNGD
SIO_010081: At1D132_RS25590
subclass of: SO_0000673
so part of: At1D132_RS25590
location: 1276..2271
location: region:1276-2271:1
so has part: feature:1276-2271:1:exon

WP_121652046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1276-2271:1:exon

At1D132_RS25595
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
gene: repC
locus tag: At1D132_RS25595
old locus tag: At1D132_48750
so part of: sequence
location: 2429..3673
location: region:2429-3673:1
so has part: feature:2429-3673:1:exon
subclass of: SO_0000010

39477016
type: Gene
SIO_000068: ncbigene

position:2429:1
position: 2429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3673:1
position: 3673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2429-3673:1:exon

At1D132_RS25595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
gene: repC
locus tag: At1D132_RS25595
old locus tag: At1D132_48750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004129924.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid replication protein RepC
translation: MQTGHVTTPFGRRPMSLALVRGQMAIENPQPDTRIDKWKVFRDVCEARERLGIQDRALAVLDALLTFYPHVELDPSQGLVVFPSNAQLSVRAHGITETTLRRQLAALVDAGLILRRDSPNGKRYAHRNRDGKVEQAYGFDLTPVLARATELALMAQDVAAERARFRRAKEALTICRRDVRKLISAAVEEGASGNWEQAESEYVRILARLPRHSNRSQVEIALDEMELLREEVLNTLEMQLKTKEMHGNGIQNDRHLQNSNTESINELEPRSGKEQGENLAGKPLTEATPSERQETKHEPIKAFPLRMVLRACPQITDYGPGGRIEHWRELMKAAIVVRSMLGVSPSAYEQACNAMGPENAAVAMACILERSNMITSAGGYLRDLTRRSERGEFSLGPMLMALMKTNDQGNRRTA
SIO_010081: At1D132_RS25595
subclass of: SO_0000673
so part of: At1D132_RS25595
location: 2429..3673
location: region:2429-3673:1
so has part: feature:2429-3673:1:exon

WP_121652047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2429-3673:1:exon

At1D132_RS25600
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25600
old locus tag: At1D132_48760
so part of: sequence
location: 3826..5118
location: region:3826-5118:1
so has part: feature:3826-5118:1:exon
subclass of: SO_0000010

39476981
type: Gene
SIO_000068: ncbigene

position:3826:1
position: 3826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5118:1
position: 5118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3826-5118:1:exon

At1D132_RS25600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25600
old locus tag: At1D132_48760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004129910.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWKSKEKQIGVEQTSGHVPRRNRLIVGRAPENTEMLFTPAELFGAMAQCSSRAKMDQRAARAQVQMCRHLISRHVDDKNDRFALLDTARTLKDYVGKAMTGLVGDGIAYLQMVRDGYRWVDHFENHEVHGKRPTTRSPDYVFSRTQDMFVALAESKATKGASKAAFTKTVREGYKEQVEPYLGRRIGSWVASHGYAVGSWMKSVKRAAIFIDHTASQAPPTGNDDDPSEGSDPGEVRFGSYCGVLNLLFGPEVGEAARDRSWRPSERSFTTVQWLGKTWIVGEDAEWEPLVVTAKEHLIFRSAPVRFVNGMALDLQIALRVFAFIESGEGEIDLMADFPEFPTDLVEAAKRSGGAIFPDGFAVLGRDEDLSLYSRILVKPPAQAEPALVESELDVGVISEGVQAIDARSYATPHTKVVEEKHALLYLTRE
SIO_010081: At1D132_RS25600
subclass of: SO_0000673
so part of: At1D132_RS25600
location: 3826..5118
location: region:3826-5118:1
so has part: feature:3826-5118:1:exon

WP_121652048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3826-5118:1:exon

At1D132_RS25605
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25605
old locus tag: At1D132_48770
so part of: sequence
location: 5357..6415
location: region:5357-6415:1
so has part: feature:5357-6415:1:exon
subclass of: SO_0000010

39476967
type: Gene
SIO_000068: ncbigene

position:5357:1
position: 5357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6415:1
position: 6415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5357-6415:1:exon

At1D132_RS25605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25605
old locus tag: At1D132_48770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020810121.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPLLFCNIAWMKNYAGRDAKDPPKGGGGYVVSEGRAGEELNFVEADDGFVYGHFETIKDDVDRDVKIERLGTSTSAEFIDGVDVVWTAPVDGKDPRCVIGWYKNARVYRKRQRFDGVYPSGQHELDEVLSFRVRARAEDAHLIPVNKRDEGLYLERGKGWSGQASWWYADDTTDPAARNFVEGIRAIIGGKIPVFDRPPVRSRAKHRAGQATADGYTRYVERHEVRVSPRHNKLEKLFKDYLERTVRGLQFLPTFCDDMRFTDGKGQDVMVEVKPTEVATIRFAIRTAMGQLFDYRQQQRWEGKQLILVETEVIKADDKALALENGFGLAWPSEGGDFKILWPPGSKPAGGY
SIO_010081: At1D132_RS25605
subclass of: SO_0000673
so part of: At1D132_RS25605
location: 5357..6415
location: region:5357-6415:1
so has part: feature:5357-6415:1:exon

WP_121652049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5357-6415:1:exon

At1D132_RS25610
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25610
old locus tag: At1D132_48780
so part of: sequence
location: complement(6484..8283)
location: region:6484-8283:-1
so has part: feature:6484-8283:-1:exon
subclass of: SO_0000010

39476982
type: Gene
SIO_000068: ncbigene

position:6484:-1
position: 6484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8283:-1
position: 8283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6484-8283:-1:exon

At1D132_RS25610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25610
old locus tag: At1D132_48780
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAEKPLRKLPAAILKPYLSAGFLQLMSKKKPAEALEDCASRIMELTRDASGRTFRESFAVSKTAGLSIQAHVYLNKRLSPWATDEFYDETNELVVIAVKGDLVAVVCSEPSMRDRLAKKIAVARPLKRDLLERAFVGKQAKAMWLTGVHTPTAAKASAKSMTGPALELALDPLGDQSFYYSAVKSSGAFDGKTVIGAAPSSSRIWVNRPKDWNAFATTLSDLIDHIITTEKGKSVAQPWLQVLAQTVGDASTASEPYAVELISPELLAEETIDQETREWAIAWAYEGKLKVLHHTGPSPTCRVSLGDREIGAVEITVGSSADRSFGRATWTDEVEGYQSEREQCSRLIERPECLRIYYADGRTLADGRLFTQAYRDQRFDWDFRDFTNYAVDKEKPKLWGGKALADVIASPKEDGTQDNSLFAYVIERLFPTGWLASDDGSMEFADFVHINSAGNHVTLIHAKGSNKTDVDREVSVSNYEVVVGQAVKNVRHLDRNILANILQGGKHKKIGGAVWLNGAKQEDRTNIIEAAKALAPDHMRTVIVLQPQLTETERKACIGSNPTATSDRIKRMKQLDTLMLSARLSCGAVGASFIGIGAK
SIO_010081: At1D132_RS25610
subclass of: SO_0000673
so part of: At1D132_RS25610
location: complement(6484..8283)
location: region:6484-8283:-1
so has part: feature:6484-8283:-1:exon

WP_121652050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6484-8283:-1:exon

At1D132_RS25615
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25615
old locus tag: At1D132_48790
so part of: sequence
location: complement(8608..9129)
location: region:8608-9129:-1
so has part: feature:8608-9129:-1:exon
subclass of: SO_0000010

39476980
type: Gene
SIO_000068: ncbigene

position:8608:-1
position: 8608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9129:-1
position: 9129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8608-9129:-1:exon

At1D132_RS25615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25615
old locus tag: At1D132_48790
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKGSFRDFLVDKCNAALIAIGIRPSKEMLAAGFRWDPTRWLTQGFYHERYRWEHGARLPDDDHGKVYDMDAIYGRYRGTSFISIEKLKLSGDKRTLFVDHIGISPRIYEGLGIGPTFIRAVAWQLRSKMNVEYIEFWENHSEFEKRNYVRFFKALKAIQISPDDPRRWRWKLP
SIO_010081: At1D132_RS25615
subclass of: SO_0000673
so part of: At1D132_RS25615
location: complement(8608..9129)
location: region:8608-9129:-1
so has part: feature:8608-9129:-1:exon

WP_121652051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8608-9129:-1:exon

At1D132_RS25620
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25620
old locus tag: At1D132_48800
so part of: sequence
location: complement(9144..10301)
location: region:9144-10301:-1
so has part: feature:9144-10301:-1:exon
subclass of: SO_0000010

39476975
type: Gene
SIO_000068: ncbigene

position:9144:-1
position: 9144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10301:-1
position: 10301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9144-10301:-1:exon

At1D132_RS25620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25620
old locus tag: At1D132_48800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020046788.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MAKAKSSQTSVERRAEELDTIASVLPLERRDELAELLTDQDVETLRHLVNQGMGDNTLRALTSDLAYLEAWGLATTGSSLPWPAPEALLLKFVAHHLWDPEKRATDPDHGMPAAVDENLRRQGFLRSVGPHAPSTVRRRLANWSTLTRWRGLHGAFASPALKSAIRLAVRAVPRTRARKSAKAVTGDVLAKLLATCESDSLRDLRDKAILMVAFASGGRRRSEIAGLRLEQLTIEAPIETEGGPPLPSLAIHLGRTKTTSGEEDDTVFLTGRPVEALNAWLAAAKIDKGSVFRGIGRWGTVSRRALDPQSVNAILKQRAEMAGLDSGEFSAHGLRSGYLTEAANRGIPLPEAMEQSRHRSVQQASSYYNNATRRSGRAARLLAGS
SIO_010081: At1D132_RS25620
subclass of: SO_0000673
so part of: At1D132_RS25620
location: complement(9144..10301)
location: region:9144-10301:-1
so has part: feature:9144-10301:-1:exon

WP_162992495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9144-10301:-1:exon

At1D132_RS25625
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25625
old locus tag: At1D132_48810
so part of: sequence
location: 10492..11643
location: region:10492-11643:1
so has part: feature:10492-11643:1:exon
subclass of: SO_0000010

39476956
type: Gene
SIO_000068: ncbigene

position:10492:1
position: 10492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11643:1
position: 11643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10492-11643:1:exon

At1D132_RS25625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25625
old locus tag: At1D132_48810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003518564.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RHE_PE00001 family protein
translation: MISMAYDLAKISMNALMKPAFDAGIALTRLDERVARSPVCAGFLERQNFADACASLWIDGELVHLEDLVLHDASHDIRTPTHELTIARDVLRTRRRIAAQPPGWALSPDGLRSLRRHNVVAGQAWPAASVGEDGGVERESVSVHADAAGEGEGEYDDASPFDAELAAIDAVLARSDAVLKKAVAPASQPRDRDPLVYDPDWDEDTRLEEWRTVLRQAEHLPVLLQAIVALDAWNELAVLQHAPWLGRLLAASILRQAGITIGAHLAAINLGLKTIPVDRRRHRDRETRLLAIAHGLLATAEIGMKEHDRLALARKMMERKLEGRRTSSKLPELVGLVMAKPLVSAGMVAKTLDVTPQAARRIVLELGLREMTGRGRFRAWGIV
SIO_010081: At1D132_RS25625
subclass of: SO_0000673
so part of: At1D132_RS25625
location: 10492..11643
location: region:10492-11643:1
so has part: feature:10492-11643:1:exon

WP_121652052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10492-11643:1:exon

At1D132_RS25630
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25630
old locus tag: At1D132_48820
so part of: sequence
location: 11785..12267
location: region:11785-12267:1
so has part: feature:11785-12267:1:exon
subclass of: SO_0000010

39477046
type: Gene
SIO_000068: ncbigene

position:11785:1
position: 11785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12267:1
position: 12267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11785-12267:1:exon

At1D132_RS25630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25630
old locus tag: At1D132_48820
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSNTFATISANGGTADVIFMHGLSGDPVDTWTSTGATEPEGAYWPHWLAADIPHLNLYTLGFTASVFAQWAKKKMNLYDRAKKFLEKLASYEFGARPMIFVCHSLGGLLVKQILRTAKESTDEDWRRVGESCLTRQNRSLIFEMSENDIVFGRIQRAVK
SIO_010081: At1D132_RS25630
subclass of: SO_0000673
so part of: At1D132_RS25630
location: 11785..12267
location: region:11785-12267:1
so has part: feature:11785-12267:1:exon

WP_162992496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11785-12267:1:exon

At1D132_RS25635
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25635
old locus tag: At1D132_48830
so part of: sequence
location: 12264..13340
location: region:12264-13340:1
so has part: feature:12264-13340:1:exon
subclass of: SO_0000010

39476991
type: Gene
SIO_000068: ncbigene

position:12264:1
position: 12264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13340:1
position: 13340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12264-13340:1:exon

At1D132_RS25635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25635
old locus tag: At1D132_48830
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSYENFSAIVLEPSYPLDELIQVSQFLKQRDLIVSAYHPDRDELYDPVTFLQDNALGAEYLILPDRNIVSRVARLAKDGSLDSHITAVASLMAFALYHDIQFEPSISFHELAPTEGNSAAIDELAWFRAADNTSAREWLDLALGVSSDLKNVPEPKPVDAQNLAAPLNRWQRNYAILLKVAELELSKAKSRDKMMGLLDWMYKDFIVGGPAAIFAAVYFAPNSPPKKGFLKNIHSSDREKAIRGVMNAAWDVTHISDFVRRLTEKLNSSQRVLLASLDDGVRLMAKIIIDTAEGEASQTAAVLSRWWAQRDAEEIAERLDGYIEEVRRHAENNTYRISNLDVLGAIVSGEQAIRGWKP
SIO_010081: At1D132_RS25635
subclass of: SO_0000673
so part of: At1D132_RS25635
location: 12264..13340
location: region:12264-13340:1
so has part: feature:12264-13340:1:exon

WP_121652054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12264-13340:1:exon

At1D132_RS25640
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25640
old locus tag: At1D132_48840
so part of: sequence
location: complement(13377..14060)
location: region:13377-14060:-1
so has part: feature:13377-14060:-1:exon
subclass of: SO_0000010

39476961
type: Gene
SIO_000068: ncbigene

position:13377:-1
position: 13377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14060:-1
position: 14060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13377-14060:-1:exon

At1D132_RS25640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25640
old locus tag: At1D132_48840
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEVDHIITESLIGTPELAGILKDFGLPGDFDLTSYRNLLPAHSRCNGKKNAHVFRATPIVQQALDTCAEKEPRVTDALKTLSSKRILNIAITKILAAHEEGTLDPKQMQRLAKIAATVTEPLREPEKQGTPFYFAPGLKLIGETPFMLHMQGPSEMVGSRPKGDHLHHSFDCPYCGPTAWNCTRCVSCGRMMIPTSGNPLPFGCRDHRTLQLFLRYSASRSADLRRV
SIO_010081: At1D132_RS25640
subclass of: SO_0000673
so part of: At1D132_RS25640
location: complement(13377..14060)
location: region:13377-14060:-1
so has part: feature:13377-14060:-1:exon

WP_121652055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13377-14060:-1:exon

At1D132_RS25650
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25650
old locus tag: At1D132_48860
so part of: sequence
location: complement(14599..21234)
location: region:14599-21234:-1
so has part: feature:14599-21234:-1:exon
subclass of: SO_0000010

39476957
type: Gene
SIO_000068: ncbigene

position:14599:-1
position: 14599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21234:-1
position: 21234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14599-21234:-1:exon

At1D132_RS25650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25650
old locus tag: At1D132_48860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006451195.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDSEVPRPAPIRIDNVRASKAGHAFHEAWAARTALELLPPSTDLTSITLEGFAEQDERQLGADAVEIADLVRYYGGVDVAHAHRVDVVQFKYSIASAGKPIRAAELASTLAKFANTDADLRATHGDDHVLKVVRYEFATNRLTHENLGQAIAAAAAGAESDDDIGRQANQIRAALKNYPHPAAELLSRLALVGSKGTLGDAERGIATTLAAWSEASDPDAEKRLLKLKNLIRIKALPGSEQDKRIDRVAVLAELEVEHEDRLYPTPDAFPEIGEVIKRSVLDDIAALAGEVGLPLLIHAAGGMGKTVLMQGLADRLREDGPVVLFDGFGAGRWRDPADGRHLPERTFVHLANLLAGQGLCDILLPFSDVTGLVRAFRKRLSQSVASARQTRGDACVSLVLDAIDHAGLASKMTGTSSFAHLLLSSISVEPIEGVRVVASCRTERIEVATGDSSYRTFPIPFFTDIEARALITYRIPDASADEVAALITRSGRNPRCLDNLLISGRPFDPVLSPNTRVKPDDLLDTLLRKRLDEVRYTARVRGAADGDIDLLLTGIALLTPPVPIEELAAAHGLMAEQVESFVADLAPLLERTPHGLMFRDEPTETLIRSTYLGNKMGKDRVIAVLQERQFVSNYAARALPALLTSLRDADQLIQLAYDPRVPKAASQVSTRDIRLARITAAIALTGELGRHDDLLKLLMEASLVAAGHERSDHFLYQHPDLAAVAGDPEAMRRLAATTVGWPGGKHAALALANAFTGEQDEARRHARRAIDWYNWSAHSERSDRFNDLETSRRWDDVGFCYVEMIAGNDVRVAEFIARQSDGNAFAKFSDLFDLLERHKYSGHFPNNRVEKRLLRCRLSSRALFAAALQFNGGNLNHLKKMVIALSGVSDSVDESEGFGMASVLAAAQAADLGLDKEGAAILTGASVKAQAIHDYSSYYPTSRAIDVTLIAAGVRAALRGKPPALLDIAPAELTRLVPAGARSRGAAAFIRVLDQKLAPPRFDGKRRRRKRAGALDEKTRSEYSRTLRGRITPLLRYAQFASDIIRPSQGRTRDATLAAAFDGLVSDVENASTYPYRDGKAYVARIGFRVIFYVADALRAIDGALAVRMAEWAAGAPGLFIPELTDVIARLSRIPHCHDAALLLAGHVDRKIQLDTDVGSRVTAYGTLARAVWRVSTEEAAAYFRRALDLADAIGSGDFDRTNHLLELTAHYSGAQLKPDASHTLARILELNQNEDGRFPWIEYAQTMVPVAGRGTLAVLARLDDRDVARLGLSLGPALTVLLRKSALKAETAAALFGLAEPIEPWTWHISDFASEVLDRLPTEHREWFFNLLLTEIDRSDQLSPTRETIEQLNRLAGSHLPAASRSRVRIEALLVRTASTSEYQPEAFPKVASEPRQIFSVDLTDPDAIDREILGEEVGRFEKRWPSRTLSDLAKRVASPADRLGFVRAVAESTAASLADKIRALDDYLEDWSRSSAAMRDALPELGLEMASRHATELVSSSSESWGTWRDLEKYFGSDRTALVEHVVAGFRGGADHLGGNAWLALAAKLAAKTSSSAIAEGLERFLAITDEKLPVEVGDGPWDVRLTAPEDEADLVAGLVWSRLGHPVAAMRWRAAHAVRRLAEIGKFDVVERLIGLFDTGKVFAFNDAKLPFYTMHAQLWLLIALGPVAKKSAEALSQRRTFFVRIAFSTDFPHVVMRAFAIDILQDIAQTLSPEERDALTSKLLTANVSPYPHAPRPDYTEYRHLSRPDSSLRSDNAFYFDYDFNKYQLERLCHVFAYPGWEAEDRIEAWVRRWDATVQSMNECPRSSSYDQAWSSGYLPDRDRYGGYLAWHALMLLAGELLATRTVVGEDWSGDAWSAYLKEYRLSHRDNLWLSDLTDPFPLDIPKEADIPMPEDESTAREDRRLLEPLLGIKTDKLVGDWIPVAGRWSIGRETTATLTSVLAGAGDAKLTAMAWLSGTHFFRWLPDDQEEIARHFGEDGHSVRAWIEKTPHTE…
SIO_010081: At1D132_RS25650
subclass of: SO_0000673
so part of: At1D132_RS25650
location: complement(14599..21234)
location: region:14599-21234:-1
so has part: feature:14599-21234:-1:exon

WP_202036730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14599-21234:-1:exon

At1D132_RS25655
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25655
old locus tag: At1D132_48870
so part of: sequence
location: 21428..23719
location: region:21428-23719:1
so has part: feature:21428-23719:1:exon
subclass of: SO_0000010

39477010
type: Gene
SIO_000068: ncbigene

position:21428:1
position: 21428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23719:1
position: 23719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21428-23719:1:exon

At1D132_RS25655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25655
old locus tag: At1D132_48870
inference: COORDINATES: protein motif:HMM:NF019313.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-loop NTPase fold protein
translation: MLRWFNRFLKPAPDDPVADTGAQVDVAASLRSPSEEAVQFGLSGDSPIRLPEHDALGIDPFAQAIAKSITAANAKDGLVYAINGTWGAGKSSAINLILHHLAGQIASDKIVATVFNPWWFSGSEALTISFFQELRATVGKSLDEKAREALATLGGRLSSAGPLLGGLASLVASPAAGAAIAGGASFVEKVTRLDSTVEKEHRKLADALRDQEAKFLIIIDDIDRLGTDDALQVFKLIKSVGRLPNVIYLLAFDRHLAEKMVAERFPAEGATYLEKVIQGAFDLPKPDPEDLRSQLLTTAGNVMGAPSEAKMQRFWNVFYDVVAPLIRTPRDVVRLSNTIKVSWPAVKENVDRADFLAIESLRLFVPEVHQAIRNHGNMLVGPQTDRNHNQQELEAEYERTFLEAVPSRGPREQVKIALRRLFPRLDSIWGNVWYSEERGWTKDRLVCSSSHFPTYFSFAVVDDGITAAESDALVANAGTPGATAAALRQFLQMPRRRKGGTRAALALEELRVRAADIHQDHITQFLKDIFSVADELDVVADNRRGFGDYGSNDTRIHWLLNSLLLDRFDQATRTSLIRDAISAAGVGWLISFSDRCKSIKDKRGTDKDRGYENFVDDETVDWLFDTSRDLVRAAAANGTLINVPDIERIIYDWHHRASNDEVRVWTDKQLENDTFVVKLAESVIRQSWSYGMGGFGSLGDRVSRKYEYVNLKSLVPLLDIERFRDRVSTMLEDSGLEPLQRQALEKFQNAPEDDPSRRGGADG
SIO_010081: At1D132_RS25655
subclass of: SO_0000673
so part of: At1D132_RS25655
location: 21428..23719
location: region:21428-23719:1
so has part: feature:21428-23719:1:exon

WP_162992497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21428-23719:1:exon

At1D132_RS25660
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25660
old locus tag: At1D132_48880
so part of: sequence
location: 23778..24281
location: region:23778-24281:1
so has part: feature:23778-24281:1:exon
subclass of: SO_0000010

39477053
type: Gene
SIO_000068: ncbigene

position:23778:1
position: 23778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24281:1
position: 24281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23778-24281:1:exon

At1D132_RS25660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25660
old locus tag: At1D132_48880
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKPSRKVELDDIIAGQILGEDPDVIALVMKIHLALEALLIEMMRAFSTDDKIYKLSFPTKTEALEKHGLIGNTDRAAFDRFNDFRNDFAHIFAHQVTLAGVLCLARDLEAQGVDFSDSVGHYSEAQASEYYGGRLGVLEEVGWCILFHASHTLCEAGGRNIFSAPA
SIO_010081: At1D132_RS25660
subclass of: SO_0000673
so part of: At1D132_RS25660
location: 23778..24281
location: region:23778-24281:1
so has part: feature:23778-24281:1:exon

WP_121652058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23778-24281:1:exon

At1D132_RS25665
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25665
old locus tag: At1D132_48890
so part of: sequence
location: complement(24614..27052)
location: region:24614-27052:-1
so has part: feature:24614-27052:-1:exon
subclass of: SO_0000010

39477041
type: Gene
SIO_000068: ncbigene

position:24614:-1
position: 24614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27052:-1
position: 27052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24614-27052:-1:exon

At1D132_RS25665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25665
old locus tag: At1D132_48890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003585893.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MSPRLKSLSIQNFRSMRGSVVIPLDAQVVLVHGTNGMGKTSVMSAIELGLTGSIAHLEEQPRYHDFLTHIDTAGGLIQLAVEGMNDRATAAGRVTFAPGSFEAKPALNSADADFFAERCYLPQAVLGRLLDIYDQKKTTNSRLTEFVKELLRLDALDALVDGLDHAFNVTRIRKLAPVYKQLEDARDLLDKQLERERSNVETARQATAQRIVRLNELMAVLDSTAVPVAAGFDVAALRAWVGDRDRDQAELASVTQQGSEVSSLLSRLNRTSAGSLDAESAALERDAAAIGSEYETWLNSPGAQITEALDALKEFHSELSPLDGASVEDQVTDALRWCAVEVDRCQRLLDQHGTASQQLTGAQTTIQRAMTRIGEINQALEAGAKGARTLAAALAGIAPHVEGDMCPVCNRDYAELDSGSLTAHIAATIANLTSEAGRLQALSTERASESERLTTARRDEASAERLVLQPEALVDLRRRQSAIASIRSRIEPLQGDAANGQSLFMRLDGARRRLAATRRAGLQSASLLPEINDAVERATGQPTTNFSGLREALEAATGVLSGRLGAVQSRLSSRVSVETELDQYAREAQLLSDRVARAAELEARVATMTGAFSSIGEVRERAKTIATAATHVRSGIVRDVFSGSLNKVWRDLFVRLAPNEQFVPQFRLPDQGDGKVEAVLETFHRSGQSSGPPGAMLSQGNLNTSALTLFLALNLSVPSLLPWLVLDDPVQSMDDVHIAQFAALLRTFSKGLGKQVVIAVHERALFEYLTLELSPAFAGDSLITVEISRNFAGDAVADPHFYAFEDDKAVAA
SIO_010081: At1D132_RS25665
subclass of: SO_0000673
so part of: At1D132_RS25665
location: complement(24614..27052)
location: region:24614-27052:-1
so has part: feature:24614-27052:-1:exon

WP_121652059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24614-27052:-1:exon

At1D132_RS25670
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25670
old locus tag: At1D132_48900
so part of: sequence
location: complement(27049..27636)
location: region:27049-27636:-1
so has part: feature:27049-27636:-1:exon
subclass of: SO_0000010

39477005
type: Gene
SIO_000068: ncbigene

position:27049:-1
position: 27049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27636:-1
position: 27636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27049-27636:-1:exon

At1D132_RS25670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25670
old locus tag: At1D132_48900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003585891.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTAETVFEILTKEGGYRPLGKPIRIGSQAFDFNHVLVAGEKANDLVIVIELTGASEDTQVTRSVLAFTRALDVLGSKRSVTAVLTSGQADNDLVNSISRVCRVLPVGAPIGPMVEEIVRDWLAVLLPLKSPPPVEHLADWKANLEKRLKDTDDEQAVNRFVQLAEGGKEAVEASLALEISTLADKVLEDGAAQA
SIO_010081: At1D132_RS25670
subclass of: SO_0000673
so part of: At1D132_RS25670
location: complement(27049..27636)
location: region:27049-27636:-1
so has part: feature:27049-27636:-1:exon

WP_121652060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27049-27636:-1:exon

At1D132_RS25675
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25675
old locus tag: At1D132_48910
so part of: sequence
location: complement(27633..29318)
location: region:27633-29318:-1
so has part: feature:27633-29318:-1:exon
subclass of: SO_0000010

39476972
type: Gene
SIO_000068: ncbigene

position:27633:-1
position: 27633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29318:-1
position: 29318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27633-29318:-1:exon

At1D132_RS25675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25675
old locus tag: At1D132_48910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003585889.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SIR2 family protein
translation: MATASTIKISETLDLLDGPQKSFSAGFQAGQYALWLGSGISRDRVVGLDGVLSKLLENLRLRITGADCEHHRALDSILGLADLSADERAQIDLAQPVASWPIHDALIDRLWNKYSKVLGTEVQGRPFDYLLWDVLDFATTFAAQKADAEHLAIGMLVLEGVVSDLATANWDGLLEAAMVELGRPNETFLVAVTGGDLHGPPGIGRLYKFHGCANRAIANEAEYRPLLVAREAAITHWALNPRFTQMREQLRALIARSRTLMIGLSGQDTNIQQLFSSNGGTWNSVPTPIVFAAQQLSEGQKSILEGAYQGDYETNRDQIRTDATLPAFGKPLLLALLLRTMFGKLAALAGLLTSPAIGAVGKQSLVDGLKALEGAAAQAGNANRYDCARTIAALMGRVSEQFLGGPGSPGRRPYMPLSTQPAHLMQQDPAGGFSARPEAAAALGLIGQGLVANQWSVSVDDPEQPTSGVLRLVAPAAEARVFLAANDDNINQLVASGAFDEADDDVVVICSRKVTPRQQRSPSKSWRTGKAPPRYVSVSDLLEGSASFDEVQSRFNSEVGL
SIO_010081: At1D132_RS25675
subclass of: SO_0000673
so part of: At1D132_RS25675
location: complement(27633..29318)
location: region:27633-29318:-1
so has part: feature:27633-29318:-1:exon

WP_121652090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27633-29318:-1:exon

At1D132_RS25680
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25680
old locus tag: At1D132_48920
so part of: sequence
location: 30196..30888
location: region:30196-30888:1
so has part: feature:30196-30888:1:exon
subclass of: SO_0000010

39476944
type: Gene
SIO_000068: ncbigene

position:30196:1
position: 30196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30888:1
position: 30888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30196-30888:1:exon

At1D132_RS25680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25680
old locus tag: At1D132_48920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014242088.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Crp/Fnr family transcriptional regulator
translation: MQGRRSDFSTIGLFRSLDEQARRSLERQCNWRSFRANEFIIDAQDAGNSVFFVIRGKVRASISIAAHASIMRDISAGEYFGEIAAIDNRPRSADIHCLTDALVASMPGPAFWDAIHTHPAVARQVLMSLTDLVRTLTDRVNETSALSMKHRLVAELLRLSRPSSRSTDLYVITPPPTHAELAARIGSHREAVTRELNMLVRNGLVTRHRGAILLNDRNSLQQHLDRAMRG
SIO_010081: At1D132_RS25680
subclass of: SO_0000673
so part of: At1D132_RS25680
location: 30196..30888
location: region:30196-30888:1
so has part: feature:30196-30888:1:exon

WP_111808509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30196-30888:1:exon

At1D132_RS25685
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25685
old locus tag: At1D132_48930
so part of: sequence
location: 31107..31772
location: region:31107-31772:1
so has part: feature:31107-31772:1:exon
subclass of: SO_0000010

39476939
type: Gene
SIO_000068: ncbigene

position:31107:1
position: 31107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31772:1
position: 31772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31107-31772:1:exon

At1D132_RS25685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25685
old locus tag: At1D132_48930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650375.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTLLTINVVNNQAVNNTFFFFQQPAIYTGGSTVYSNSLFSQLLAPAKKGSSLTFQTNVQFYAGVQQTNNAIPIPGQINGFASSIQPIDLTPATGSSDNSTIMTATPLSLTPASPTTGVQKGAFRITTDIYTPPAQQFYAGSAISANGQIVLSNFVLAQPQQNIDCQPILKFYVGTGTYTAGVNMNFTQSSEKAALCDFTGGYSVANVAYNSDGNWTVNMS
SIO_010081: At1D132_RS25685
subclass of: SO_0000673
so part of: At1D132_RS25685
location: 31107..31772
location: region:31107-31772:1
so has part: feature:31107-31772:1:exon

WP_111808507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31107-31772:1:exon

At1D132_RS25690
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25690
old locus tag: At1D132_48940
so part of: sequence
location: 31895..32395
location: region:31895-32395:1
so has part: feature:31895-32395:1:exon
subclass of: SO_0000010

39476997
type: Gene
SIO_000068: ncbigene

position:31895:1
position: 31895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32395:1
position: 32395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31895-32395:1:exon

At1D132_RS25690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25690
old locus tag: At1D132_48940
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQKKKVVGFLALFSAAVCSFAGQSLAQVAKCQALTLYGNAAQSGLCKSLSTGNHWVCALADSPDIHLTFNNATALHITVRSPACQGNAYLAGAWPANLTLAAGQPAMVCGVNVQNYVARLNAQPQSAAPPACHNSFVNAQAAGRIDAATTTFYVNNCNNPPPPCP
SIO_010081: At1D132_RS25690
subclass of: SO_0000673
so part of: At1D132_RS25690
location: 31895..32395
location: region:31895-32395:1
so has part: feature:31895-32395:1:exon

WP_111808505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31895-32395:1:exon

At1D132_RS25695
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25695
old locus tag: At1D132_48950
so part of: sequence
location: 32529..33245
location: region:32529-33245:1
so has part: feature:32529-33245:1:exon
subclass of: SO_0000010

39477025
type: Gene
SIO_000068: ncbigene

position:32529:1
position: 32529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33245:1
position: 33245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32529-33245:1:exon

At1D132_RS25695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25695
old locus tag: At1D132_48950
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSALYKIVVINNSSQAQPFSLFQAASGYDSPAQVVSTSLDCQPLRPFSEAGTTLSFSVDAQIYAGAQETMPNTFKNSMAESHFLSRSLIAASAPQTFAVQKVNPTQDIGSSAANFTIMSVDPVGLSPAIAKEGLAPGAFCISVPSYTPPVPSYKIGNAAVNQDGSVILSSFIQAPPNQLVAITVSQVFYVAAVAYPTGSVIDYPTAASSAAKCDFSTGYTTYTVSYGSDGRFSVRAAY
SIO_010081: At1D132_RS25695
subclass of: SO_0000673
so part of: At1D132_RS25695
location: 32529..33245
location: region:32529-33245:1
so has part: feature:32529-33245:1:exon

WP_111808503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32529-33245:1:exon

At1D132_RS25700
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25700
old locus tag: At1D132_48960
so part of: sequence
location: complement(33254..36247)
location: region:33254-36247:-1
so has part: feature:33254-36247:-1:exon
subclass of: SO_0000010

39477007
type: Gene
SIO_000068: ncbigene

position:33254:-1
position: 33254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36247:-1
position: 36247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33254-36247:-1:exon

At1D132_RS25700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25700
old locus tag: At1D132_48960
inference: COORDINATES: protein motif:HMM:NF012437.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenylate/guanylate cyclase domain-containing protein
translation: MVKIVRHRQGISAWLHGPDLKQYAENFSAANIEREVLPHLSESELNEIGINAADHRRKILHTLPKLSWEREAAPSAELRYLTVVFCDLVGSTRLAESLGAEAFWDLLVRYYSAVETATVPLGGHIAQHHGDGVLIYFGYPNSLEDAALRGVLSACRTIKEVAELKTLRGQRVEARVGVSSGLVVVDKELPSTNLRAGHAFGPTVNLAARLQTVAKPGHVVASETTIALVGHHFRTRSLGKHRLKGIKAPLAVFDIEGECSADLSVAITSQPIRVPFFGRARELGKLEEAWSAVKAGGSRAAHIGGEPGIGKSRLVTEFLASIERSGYSARRISCQPQSEAIALHAFLDSLRAEKKQLAFSTRLLDAFDAHHGRNAIARRERRSALIDQLVDHFVAGDRPRIFWCDDIHWADPSSLEALSRLLARRLPGLLVITSGRDEAGAKWRGIQHPSEMDRLELEPLPPADTKKIIAHLLSGERPGKTLISTLANRSEGVPLFAEELALELRPSKSGRVRKGREASVPLSLQQRLQARIARLTVGRHLMRLMSCLGRSVSLPLLRELCADDRHIDEALEEITSVGLAEVQLSSADGEDNLLVCRHQLILDCAYEMILRRDRVFLHGRIADLLLKRAADGIPVHPLMQAEHLERAERLKEAAVVYAAAGRRAAAQSADTEAASLHRRALDLARRSPASADGWQLEFEADTLLSLYPAIVGAAGYSTANAEVIARIEELVPRLGGADRLLSTVFIRWLDHLAQGDIDTAHGLTLGLADAVPAAEKSVQALMVNRMLGSTYMFRGEFEKASAHLGSFIEAFEDDPNLPALNQFGATDNYITVLCCLAAISAFMDDAPTAHKASQRAVSAAENHGHIHTLCHTLCFGAALPAGLRQDWEQLALHQKRLTAIAKKHQLGFWASFAMMLKGISSAARGDVENGGAIFYRARNKLVGQGFHFMGPTFHMVLLLASGKALPPVSLALLEKELASGERWGLLLLNKLRTGSSV
SIO_010081: At1D132_RS25700
subclass of: SO_0000673
so part of: At1D132_RS25700
location: complement(33254..36247)
location: region:33254-36247:-1
so has part: feature:33254-36247:-1:exon

WP_162992498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33254-36247:-1:exon

At1D132_RS25705
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25705
old locus tag: At1D132_48970
so part of: sequence
location: complement(36241..37818)
location: region:36241-37818:-1
so has part: feature:36241-37818:-1:exon
subclass of: SO_0000010

39477026
type: Gene
SIO_000068: ncbigene

position:36241:-1
position: 36241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37818:-1
position: 37818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36241-37818:-1:exon

At1D132_RS25705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25705
old locus tag: At1D132_48970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650378.1
GO function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MLWYDSRARDNVTKFSTWNLSKVSSGEETTFALDDLQSLQRSIVGSVVLPGDADYDKARMLSNPRFSAFPAVIVYCEVDSDVAACLSWARMRKLPVVVRSGGHSTGGFSAQDGFLIDVSRLNDVVVDVSDRTVWVGPGTTFRKFNAKIEAFGLHTPGGACPDVCVGGYMQGGGYGFTARIFGMNCDQVIAVRVMLADGRTVYADATTNRDLFWAIRGGTGSNFGVLLGAKYRLYEGKEFSGFSVVWSLADKNAAENAAKALSWLQQNFMRANAPADVGYQMIWAFEGPQPTSKQPVMLMRGMYRGSTENLEAILQPVLALPGATLQAIYNSQPYSSLNKILLTKPYEVPAFPADMTPMPPPEAKLSRYIDRELAPAEWLKLLQYFLTSTSPYTIAAMEIYGGAIESQPILGNAFIHRAVYCDLFLDVFWSNHAEKAEMLEYIEGWRELVAPVWSGFVYQNYPSPVDPDFGTHYWGTFYPLLGMIKSKYDPDAVFSYPQSIAPAIDQGGKDHDIGLSDPIECEPLW
SIO_010081: At1D132_RS25705
subclass of: SO_0000673
so part of: At1D132_RS25705
location: complement(36241..37818)
location: region:36241-37818:-1
so has part: feature:36241-37818:-1:exon

WP_111808499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36241-37818:-1:exon

At1D132_RS25710
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25710
old locus tag: At1D132_48980
so part of: sequence
location: 38496..39092
location: region:38496-39092:1
so has part: feature:38496-39092:1:exon
subclass of: SO_0000010

39477018
type: Gene
SIO_000068: ncbigene

position:38496:1
position: 38496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39092:1
position: 39092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38496-39092:1:exon

At1D132_RS25710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25710
old locus tag: At1D132_48980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018901820.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MIVTYKTEHIRQQLRAAREGQKVSQRELSARSGLTQSHISQIERGTMEPGLGSLVDVVRALDLEIVLAPKKLMPAIRNILDSNSALNEVVTADQRKLVARLERWTSEFSRGIGTNSDTFALKDSLVLLRHLPLTPDELDILKRTAGRLDNYRTGKMPRQEMREIAQEIRGLRNAAVHRDRDDAVPRSAYALDEEADDA
SIO_010081: At1D132_RS25710
subclass of: SO_0000673
so part of: At1D132_RS25710
location: 38496..39092
location: region:38496-39092:1
so has part: feature:38496-39092:1:exon

WP_202036729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38496-39092:1:exon

At1D132_RS25715
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25715
old locus tag: At1D132_48990
so part of: sequence
location: 39085..40329
location: region:39085-40329:1
so has part: feature:39085-40329:1:exon
subclass of: SO_0000010

39477049
type: Gene
SIO_000068: ncbigene

position:39085:1
position: 39085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40329:1
position: 40329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39085-40329:1:exon

At1D132_RS25715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25715
old locus tag: At1D132_48990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018901819.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HipA family toxin
translation: MPKVTVLDVKLYGEPVATLTNLQDGRTIFAFNDYYVENEKRPTLSLSFKDPFGALITKFRPYSIVVPPFFSNLLPEGPLRKYLAERAGVRQTREFFLLWMLGRDLPGAVTVHPSEGDDLPPDDEQSTMEARPNALRFSLAGVQLKFSALENVTKGGGLTIPAGGIGGSWIVKLPSQQYSGVPENEFSMMTIADMMGMEVPEIKLVELDEVSGLPQGVGELHGQALAVRRFDRTPEGPVHIEDFAQVFGVKPDDKYSKGNYRMIARVLGIETSTADVAEFIRRLVFSTLIGNGDMHLKNWSLIYPDRRTPALSPAYDLLSTIPYIEGEDTAALNFSRTKRMAELSRDELAHLAAKSALSEKLVLDTARETVGRFTDVWKNEKNNLPVTAKVRDAIDAHLPTIELYREFTKTTIQR
SIO_010081: At1D132_RS25715
subclass of: SO_0000673
so part of: At1D132_RS25715
location: 39085..40329
location: region:39085-40329:1
so has part: feature:39085-40329:1:exon

WP_121652091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39085-40329:1:exon

At1D132_RS25725
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25725
pseudo: true
so part of: sequence
location: <40720..>42285
location: region:40720-42285:1
so has part: feature:40720-42285:1:exon
subclass of: SO_0000010

39477017
type: Gene
SIO_000068: ncbigene

position:40720:1
position: 40720
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:42285:1
position: 42285
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40720-42285:1:exon

At1D132_RS25725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011982997.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3 family transposase
SIO_010081: At1D132_RS25725
subclass of: SO_0000673
so part of: At1D132_RS25725
location: <40720..>42285
location: region:40720-42285:1
so has part: feature:40720-42285:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40720-42285:1:exon

At1D132_RS27455
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS27455
so part of: sequence
location: complement(42519..42899)
location: region:42519-42899:-1
so has part: feature:42519-42899:-1:exon
subclass of: SO_0000010

66225142
type: Gene
SIO_000068: ncbigene

position:42519:-1
position: 42519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42899:-1
position: 42899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42519-42899:-1:exon

At1D132_RS27455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS27455
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MILRPCCASSLTRWTRSRCWSKKTTGLCIACTACSSWRWRSSYRAAHRESRKAFYDWLARTITIDGIQKIERDTEFDNETYHSGGIRLYYPETTGTNRISRTVLLEAGFDTVAPNIDKDISSWAYD
SIO_010081: At1D132_RS27455
subclass of: SO_0000673
so part of: At1D132_RS27455
location: complement(42519..42899)
location: region:42519-42899:-1
so has part: feature:42519-42899:-1:exon

WP_162688300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42519-42899:-1:exon

At1D132_RS25735
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25735
pseudo: true
so part of: sequence
location: complement(42914..43469)
location: region:42914-43469:-1
so has part: feature:42914-43469:-1:exon
subclass of: SO_0000010

39477043
type: Gene
SIO_000068: ncbigene

position:42914:-1
position: 42914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43469:-1
position: 43469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42914-43469:-1:exon

At1D132_RS25735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017992741.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: At1D132_RS25735
subclass of: SO_0000673
so part of: At1D132_RS25735
location: complement(42914..43469)
location: region:42914-43469:-1
so has part: feature:42914-43469:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42914-43469:-1:exon

At1D132_RS27460
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS27460
old locus tag: At1D132_49040
so part of: sequence
location: 43737..44642
location: region:43737-44642:1
so has part: feature:43737-44642:1:exon
subclass of: SO_0000010

66225143
type: Gene
SIO_000068: ncbigene

position:43737:1
position: 43737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44642:1
position: 44642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43737-44642:1:exon

At1D132_RS27460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS27460
old locus tag: At1D132_49040
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMKILQGNLANQHNARSSDVPIRMEAIGPRIREKSANDEARAVHNIVSSVNSSQKVETIYKSAQYIKYLEPSNKYKMIHGMINTFREMHDESQPPNGSLSKVAEAIQSAKSYMTEDHKVAFAAIVFSNPDTARFFVKELRPPAQTSTRPDTAVSAQNSLQIPKSKLADVRFLSDKQEKQLAGSIANNPHPHDQACQLAGYSNQLGSFESENRSAIINSALNTVKNDKVNDEIRAAVAAILLKSQHVMSNEQKAEISNIVLGHVSGGNAIIEGAKRANAELDQAKARSDLINRDRDRTIFSR
SIO_010081: At1D132_RS27460
subclass of: SO_0000673
so part of: At1D132_RS27460
location: 43737..44642
location: region:43737-44642:1
so has part: feature:43737-44642:1:exon

WP_162992499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43737-44642:1:exon

At1D132_RS27690
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS27690
old locus tag: At1D132_49050
so part of: sequence
location: complement(44824..45480)
location: region:44824-45480:-1
so has part: feature:44824-45480:-1:exon
subclass of: SO_0000010

71770907
type: Gene
SIO_000068: ncbigene

position:44824:-1
position: 44824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45480:-1
position: 45480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44824-45480:-1:exon

At1D132_RS27690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS27690
old locus tag: At1D132_49050
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPATAAHYGVGVLPARPKRPKDKAKVEAGVRFAQTCILGRLRNQTLFSTEEANAAIRGAVERINTHLMRRLGQMFQTTERPALAALPAEDYEFAEWRLAQVSTDYHVELERCFYSVPHNLIRQQVDVRATSRTIELFFKAKRIAVRQRRYRGTRFGTDPDHMPSSHRRYADWSPERFRRWARSIGPQTERLIIAILASRPHPEQSFFRRRPPTASAMC
SIO_010081: At1D132_RS27690
subclass of: SO_0000673
so part of: At1D132_RS27690
location: complement(44824..45480)
location: region:44824-45480:-1
so has part: feature:44824-45480:-1:exon

WP_244632796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44824-45480:-1:exon

At1D132_RS27695
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS27695
so part of: sequence
location: complement(45413..45643)
location: region:45413-45643:-1
so has part: feature:45413-45643:-1:exon
subclass of: SO_0000010

71770908
type: Gene
SIO_000068: ncbigene

position:45413:-1
position: 45413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45643:-1
position: 45643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45413-45643:-1:exon

At1D132_RS27695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS27695
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAVAIELKKPGVTLSILWEEYRAVHPDGYGFNQFCDLFRSFERRLTPTMLQVHVAGDGGPLWRRRSPGTAEAPEG
SIO_010081: At1D132_RS27695
subclass of: SO_0000673
so part of: At1D132_RS27695
location: complement(45413..45643)
location: region:45413-45643:-1
so has part: feature:45413-45643:-1:exon

WP_244632795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45413-45643:-1:exon

At1D132_RS27700
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS27700
so part of: sequence
location: complement(45651..45875)
location: region:45651-45875:-1
so has part: feature:45651-45875:-1:exon
subclass of: SO_0000010

71770909
type: Gene
SIO_000068: ncbigene

position:45651:-1
position: 45651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45875:-1
position: 45875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45651-45875:-1:exon

At1D132_RS27700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS27700
inference: COORDINATES: protein motif:HMM:NF024776.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MRQLRHLLRLRADGVSVRDIADMLCIARSTVQDGISRAASAGLSWPLSADLTDDVPGRPTVFMSGQQVRTATAC
SIO_010081: At1D132_RS27700
subclass of: SO_0000673
so part of: At1D132_RS27700
location: complement(45651..45875)
location: region:45651-45875:-1
so has part: feature:45651-45875:-1:exon

WP_244632794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45651-45875:-1:exon

At1D132_RS25745
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25745
old locus tag: At1D132_49060
so part of: sequence
location: complement(46472..47416)
location: region:46472-47416:-1
so has part: feature:46472-47416:-1:exon
subclass of: SO_0000010

39477002
type: Gene
SIO_000068: ncbigene

position:46472:-1
position: 46472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47416:-1
position: 47416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46472-47416:-1:exon

At1D132_RS25745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25745
old locus tag: At1D132_49060
inference: COORDINATES: protein motif:HMM:NF012301.2
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MNDKPVLLFVDDEERIVKLLKIMFRSEYEVYTATSAREALAVLETIPVDVLISDQRMPEITGIQLLSQVRERWPETVRLLLTGYSDLVAIVGAVNEGEVYRFINKPWNQAELRAVIAEAVDSAQSARTIRQTVAPIWRDDTNTPFSVASQLLAIEGCDADRQEVVEMFTYDFRVHAARTLKEAIDILTHEQIGVIVSNAEVDGVDITDVLAEIGRIDPAITMVVMTEKPSSETIINLINSGRIYRFAMQPLSPNLFRLAVHAAMREHHRRLADPRVVKRRMLLEASKESESDGMYNSLVQNLRRFTEVSRATTE
SIO_010081: At1D132_RS25745
subclass of: SO_0000673
so part of: At1D132_RS25745
location: complement(46472..47416)
location: region:46472-47416:-1
so has part: feature:46472-47416:-1:exon

WP_111808493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46472-47416:-1:exon

At1D132_RS25750
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25750
old locus tag: At1D132_49070
so part of: sequence
location: complement(47480..49231)
location: region:47480-49231:-1
so has part: feature:47480-49231:-1:exon
subclass of: SO_0000010

39477033
type: Gene
SIO_000068: ncbigene

position:47480:-1
position: 47480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49231:-1
position: 49231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47480-49231:-1:exon

At1D132_RS25750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25750
old locus tag: At1D132_49070
inference: COORDINATES: protein motif:HMM:NF039312.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MKISDFIDDASSRSAIQRFASSRRGWMWCVALVVLLSGLLSCLVWYAQRPSQTLPAFQQSFDELRSLEARWNSGILALQLGITPNYDNVTLTARDLEQGLTALTARTASNPELSGLLDKLHQYQSSIGQKNILFQQVKASHAMLRNAVSVLPGVIAECYELPSVSIEATGNKRVSDLITESVNSVMSFLTAPTPLLQRQVNDRLSRIRDAAQTSDTGLATALKRLLAQIDVVVRERIKGNNLSLQLSAVATDADAKVILEQIRELSIGAEATKRALWLGVILLSAVLFILFLALVYSLSRRFLKLKKDNAMLQQANENVEEQLMQSAKLSALGQMVAGITHEINTPLAYVRAVFELIRERLTSEAAQERVADEEAHEEVVMLLSDGLHGLDEIATLVRTMKNFSRLDRGAIEPFSVEEGLESALLLAKPKLKYVADIKRDFDSIPPVMGSPTQLRQVFLNLIVNAADAIASTNRRGTLTLRTLITSSDMVQIDICDDGPGIPEENLSKIFDPFFTTKSVGQGTGMGLSICYRIIENHGGTIAVNSRVGKGSVITLILPRMDASFASVSTPKLSHTSETLLSTG
SIO_010081: At1D132_RS25750
subclass of: SO_0000673
so part of: At1D132_RS25750
location: complement(47480..49231)
location: region:47480-49231:-1
so has part: feature:47480-49231:-1:exon

WP_111808491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47480-49231:-1:exon

At1D132_RS25755
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25755
old locus tag: At1D132_49080
so part of: sequence
location: complement(49244..50296)
location: region:49244-50296:-1
so has part: feature:49244-50296:-1:exon
subclass of: SO_0000010

39477047
type: Gene
SIO_000068: ncbigene

position:49244:-1
position: 49244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50296:-1
position: 50296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49244-50296:-1:exon

At1D132_RS25755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25755
old locus tag: At1D132_49080
inference: COORDINATES: protein motif:HMM:NF015131.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c peroxidase
translation: MKPHFTPDTKRVVLRLKISEGCKAVLLRFARSGVLCCAMGTAMLGSVTHAQSPTIGEPITPVPRHTELNGPKVELGKKLFSDSRLSGGNGMACTSCHLKQFGLTDGRALPPGLPGWRGQINTPTLYNVDLNALFSWSGQIKTLYEQADGVIERTMGGHWPEVVVTLNRDSELTKAFNAIYDDGLVRKNVVDALVEYERSLNTPDAPFDRYLRGEENALSAEAKAGYGLFKDYGCASCHQGVNVGGNMMQVFGIFGTPPGTENGASTHGSAKATGISENEAVFRVPSLRNVAKTAPYFHNGSAQTLPEAINVMATNQLGRDLSTEEIARLEAFLESLTGEYQGFPVGNSGQ
SIO_010081: At1D132_RS25755
subclass of: SO_0000673
so part of: At1D132_RS25755
location: complement(49244..50296)
location: region:49244-50296:-1
so has part: feature:49244-50296:-1:exon

WP_121652063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49244-50296:-1:exon

At1D132_RS25760
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25760
old locus tag: At1D132_49090
so part of: sequence
location: 50507..53689
location: region:50507-53689:1
so has part: feature:50507-53689:1:exon
subclass of: SO_0000010

39477004
type: Gene
SIO_000068: ncbigene

position:50507:1
position: 50507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53689:1
position: 53689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50507-53689:1:exon

At1D132_RS25760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25760
old locus tag: At1D132_49090
inference: COORDINATES: protein motif:HMM:NF012708.2
GO function: GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FHA domain-containing protein
translation: MFSSFPERAMLSIRGFLLFAWLVLIVSLLYDPFSVQWTHPGSAGPFGISLTPVVVQGQVLPNQPYSMGSRMFWTMIVPILPLFLMVFGHEAWRRICPLSLASQIPSYLGLRRRRSTLERRTGLIKLTIPLIKRDGWLERNSWYVQFGLLFCGIIARLLLINTDRHALAIALLSVIGAAMLTGMLWGGKTWCNFFCPANVVQKIYTEPGGILESSPHFSRPALPQSMCRKPSEKGDISACVACKANCGDIDLQRSYWSGVTAVQRRNVYYMFVGLIIGFYGFYYLYAGSWDYYFSGIWTHEEGIRAKLLQPGLFILGYAVPIPKMLSAPLVLGLACAVSLVLGRGLEALYRKIRASDPGMTEQLIVHHCLCVSAWVSINAFYLFGGRPNILLLPPLAGRVVDIAIVTLTTIWLRQVLLQTPERYQQEGMASGLLKQLKTMKLDGSAFSDNKKIENLRPDEIYLLAKVLPNFSQQQKLDAYSKMLEEQIAKGTTGGETSHKLLEDFRKQLNITEEDHNNLLDALGYSDDSNMHQISLSAEEKAISIAQYRSILEKTVTERMGTGQTVANILELEAVKSMLTVMRQSLQVSDSEHEAALAALCSGGMISEEMEDSLEALVRHKSVRLCLERAEVYDPLGSSLADVLLDYLEEREQLLFSVTLSLVRNFLDTPETGRIADDLAALAGPRLKLMLRQSIPSNPDLRWREVFPAEVLERLQQTRGLGESESAADQRAIAGSRDIEQNLLEVLTLEDPTIRAIGLTVFSYMAPELVANVARGLLEESDTLQHAMLYAVANHLSGLETSLQCDSAAMTFRATVNTANGSQILRLNKRLVTLGRAADNDISISDPAVWTYHAELKAEHGEVRLMRVDNAIVFVNGSQVHNEPVAVTRHSVIRFGNAEATAPSVVINWDNEIETAETVHIHPIHRLAILARHSKLRRLNPELLSTLALQSRAVKYRRGDRLEARTGEQRFFLVHTGLIRLFDPASMNYVSGVSYGAGDLFRFAPGAVDSPYFPETESDISVLLDVGACPEVEICAVNPQVNQGSALNGRVVHSGPTDQHI
SIO_010081: At1D132_RS25760
subclass of: SO_0000673
so part of: At1D132_RS25760
location: 50507..53689
location: region:50507-53689:1
so has part: feature:50507-53689:1:exon

WP_121652064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50507-53689:1:exon

At1D132_RS25765
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25765
old locus tag: At1D132_49100
so part of: sequence
location: 53721..55517
location: region:53721-55517:1
so has part: feature:53721-55517:1:exon
subclass of: SO_0000010

39476999
type: Gene
SIO_000068: ncbigene

position:53721:1
position: 53721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55517:1
position: 55517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53721-55517:1:exon

At1D132_RS25765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25765
old locus tag: At1D132_49100
inference: COORDINATES: protein motif:HMM:NF012402.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hybrid-cluster NAD(P)-dependent oxidoreductase
translation: MNTNVSVEQQKASLFIARIAFSMFVYVADVEKDITAQEVRRFQTLLKETSWTENSDLLEAFEELRDKYSTFWSAYEDGRLTVTSASISEAMTHVSMLVGETRDKKLRKDLSRFLERLEGGIYGVKLLQGDQKAKAEARKELHRIVGHVRETPLKSVEEQPEVTRPVSVARGSEAKARAQSPVPAPAPASSQAAGVRLWQSGKTRVRCVSVVQETHDTKTYNFVAEPQVLFHFKAGQFVTIEIDLKGQTLRRSYTISSSPSRPYLLSITVKKVPMGWMSNWLFENMTEGMECTISGPVGKFTCADHMAPKMLFLAAGSGITPCMSMLRWLADTPTTTDIVFINSVRTPADIIFHQELLYLGTRLGARLRLAILPGALSPGLPWHGPVGPLNSDLLRGYAPDYLKREVFTCGPPGFMDFARSLLQKMDFPLRHYHQESFGSAAPASAAAVPAPAPAEPVSPLTPTLKPASGASIMAASVIEPLKPIPTAVTTRTMLSPPVNVGSPARAASVRSAPSIEIKQSGERFASEPGQTILEAAEANGVNLAHSCRAGVCGACKMRAISGDVDMDGGHCLSGDDLAEGLVLTCVGRAKGGVVLSSQ
SIO_010081: At1D132_RS25765
subclass of: SO_0000673
so part of: At1D132_RS25765
location: 53721..55517
location: region:53721-55517:1
so has part: feature:53721-55517:1:exon

WP_111808484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53721-55517:1:exon

At1D132_RS25770
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25770
old locus tag: At1D132_49110
so part of: sequence
location: 55666..56685
location: region:55666-56685:1
so has part: feature:55666-56685:1:exon
subclass of: SO_0000010

39476959
type: Gene
SIO_000068: ncbigene

position:55666:1
position: 55666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56685:1
position: 56685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55666-56685:1:exon

At1D132_RS25770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25770
old locus tag: At1D132_49110
inference: COORDINATES: protein motif:HMM:NF015431.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MTDWRDGGNGANTIEAGQAEDQSSLHRRLSGIDLNLLIALEALMDCRNVTHAARKLGQTQPAMSRSLGRLRDLLGDDLLVRSSTGLKPTAYGDYLATVLPAAMLHIKDLISSRPMEAETRLSISNGLTPAVLPYFLKFSGRENEMLKIATHRSADEALSQLRLRTADFVLGGISTIDTDIESEVVVEEEFVTLVGYNRRGVGGARPSEGAYLSLQQISLVENGREIFPQLGETLNSHGIRRTNMIEIPDVTAAALMVSESDLALTVPRSIASWLSKSLRLAAVLPPVSISPERVSLAWLAADSNNKRTRTLNEIKASVRDAMAQEQLSVTALRAVDRED
SIO_010081: At1D132_RS25770
subclass of: SO_0000673
so part of: At1D132_RS25770
location: 55666..56685
location: region:55666-56685:1
so has part: feature:55666-56685:1:exon

WP_162688299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55666-56685:1:exon

At1D132_RS25775
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25775
old locus tag: At1D132_49120
so part of: sequence
location: 56690..57643
location: region:56690-57643:1
so has part: feature:56690-57643:1:exon
subclass of: SO_0000010

39476996
type: Gene
SIO_000068: ncbigene

position:56690:1
position: 56690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57643:1
position: 57643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56690-57643:1:exon

At1D132_RS25775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25775
old locus tag: At1D132_49120
inference: COORDINATES: protein motif:HMM:NF015431.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MVAKLALWTENDADNVDLGQFDLNLLVVLNALLQHRNITHAGNALQLSQPATSRALTRLRELFEDELLIRNQRSFVLTPLAKVLMPKVQAALGNIDKVFSKRIIAPERFSVAMPDHIAFFLAPSLTAYFREVSSTTIFLPHIRLANILSQMSDGGIDLALGQAEDTPPGFFCRALPPIPSLCLARKGHAALQGTIPYTDLGRFLSVRIGAAFNAGFGEVSDGLEALRPRGRETITVPDIHTAARLVHDTDAIIVLPSPSAMFLSHRFDLETFLPKKGPAPPSYQVSLIWHERCHRNSIHAAVRSMVASQVMEGRVEA
SIO_010081: At1D132_RS25775
subclass of: SO_0000673
so part of: At1D132_RS25775
location: 56690..57643
location: region:56690-57643:1
so has part: feature:56690-57643:1:exon

WP_111808480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56690-57643:1:exon

At1D132_RS25780
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25780
old locus tag: At1D132_49130
so part of: sequence
location: 57823..58197
location: region:57823-58197:1
so has part: feature:57823-58197:1:exon
subclass of: SO_0000010

39477009
type: Gene
SIO_000068: ncbigene

position:57823:1
position: 57823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58197:1
position: 58197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57823-58197:1:exon

At1D132_RS25780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25780
old locus tag: At1D132_49130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014240038.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MRYVAKNDQLKIEADSLEGASALLGGRWKFVILWHLLAGPLRFAELRRCMPLAAPKNLLRQLHDLERRGLVMREASTKPDVWVEYSISPIGRTLEPILLALEYWSERYDTHCANPLDRRRAAVQ
SIO_010081: At1D132_RS25780
subclass of: SO_0000673
so part of: At1D132_RS25780
location: 57823..58197
location: region:57823-58197:1
so has part: feature:57823-58197:1:exon

WP_111808478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57823-58197:1:exon

At1D132_RS25785
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25785
pseudo: true
so part of: sequence
location: complement(58082..59411)
location: region:58082-59411:-1
so has part: feature:58082-59411:-1:exon
subclass of: SO_0000010

39477014
type: Gene
SIO_000068: ncbigene

position:58082:-1
position: 58082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59411:-1
position: 59411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58082-59411:-1:exon

At1D132_RS25785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016558830.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS256 family transposase
SIO_010081: At1D132_RS25785
subclass of: SO_0000673
so part of: At1D132_RS25785
location: complement(58082..59411)
location: region:58082-59411:-1
so has part: feature:58082-59411:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58082-59411:-1:exon

At1D132_RS25790
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25790
old locus tag: At1D132_49170
so part of: sequence
location: complement(59437..60276)
location: region:59437-60276:-1
so has part: feature:59437-60276:-1:exon
subclass of: SO_0000010

39476953
type: Gene
SIO_000068: ncbigene

position:59437:-1
position: 59437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60276:-1
position: 60276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59437-60276:-1:exon

At1D132_RS25790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25790
old locus tag: At1D132_49170
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLLIHSEYAAILNPATFHQLKQHFSKSIPLNYSVRDTMADAARMKRFLNITATFAHHLNNDLAAVLGYAEILADDANVDEAINTYAMEILVGGRSVRSTVERFHMLHRLASAEVFQFDVRQVIDRTRNALISRLVPSLKLEVATSQSPLTHTGSPKDLEPILRELCDVAMGNISHTGTLYIGSDAIEVTSPKHLSHGLLSEGEYVRITIQATADGITPADIDTTEYATIKDHMRPGKISGELIGARSAVYLLDGVLHTLSQPNRYSQSEIYLPTTEYVP
SIO_010081: At1D132_RS25790
subclass of: SO_0000673
so part of: At1D132_RS25790
location: complement(59437..60276)
location: region:59437-60276:-1
so has part: feature:59437-60276:-1:exon

WP_111808476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59437-60276:-1:exon

At1D132_RS25795
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25795
old locus tag: At1D132_49180
so part of: sequence
location: complement(60260..61033)
location: region:60260-61033:-1
so has part: feature:60260-61033:-1:exon
subclass of: SO_0000010

39477032
type: Gene
SIO_000068: ncbigene

position:60260:-1
position: 60260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61033:-1
position: 61033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60260-61033:-1:exon

At1D132_RS25795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25795
old locus tag: At1D132_49180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018900792.1
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MQTILVVDDDPSMRNLLVDYLSKHNFHAFALEDGSQLRRSLAAKVADLVIVDLNLGEEDGLEIVRELNEKPDLPVIIISGDRLEENDKVVGLETGASDYITKPFGMHEFLARVRAALRGRIDRAPVYSNTIYVFDEWRVNTRHRKLRDASGEELKLTSTEYNLLMAFLKSPRQTLSREQLLIASRVYDQEIFDRSIDVLILRLRRKLELDASNPRYIKTERGMGYHFDVDVHIEQPRQGITSRMIPSYKGSQHAPHS
SIO_010081: At1D132_RS25795
subclass of: SO_0000673
so part of: At1D132_RS25795
location: complement(60260..61033)
location: region:60260-61033:-1
so has part: feature:60260-61033:-1:exon

WP_111808474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60260-61033:-1:exon

At1D132_RS27705
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS27705
old locus tag: At1D132_49190
so part of: sequence
location: 61394..62314
location: region:61394-62314:1
so has part: feature:61394-62314:1:exon
subclass of: SO_0000010

71770910
type: Gene
SIO_000068: ncbigene

position:61394:1
position: 61394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62314:1
position: 62314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61394-62314:1:exon

At1D132_RS27705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS27705
old locus tag: At1D132_49190
EC number: 4.2.2.n1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011655377.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MEYLIKLIKSEFNMTNTYCVFAISGFLLVGQSNIARSAVFEQMDNGQIATMDGGVPAGTPSLEQRIAQEGEQPLIARSHVLVGFAQLPVDRNSSVLLNLDLGPASRTSFSVRDGRERPLPEPRALTRRFSVEQHKMRDLAAQVAFEFSRDAGVAKAGLDRQSFVNLFTTMIQRESNFNARAVSHAGASGLGQLMPATARAMGVCDVFSGRDNLEGAARYLTQMLDQFASSSLALAAYNAGPGAVQKYRGIPPYRETRQYVADIIHAVASQSDIELTPSYAGSRFKTGPETDCGAPDAPATASLIPA
SIO_010081: At1D132_RS27705
subclass of: SO_0000673
so part of: At1D132_RS27705
location: 61394..62314
location: region:61394-62314:1
so has part: feature:61394-62314:1:exon

WP_202036728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61394-62314:1:exon

At1D132_RS25805
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25805
old locus tag: At1D132_49200
so part of: sequence
location: 62350..62664
location: region:62350-62664:1
so has part: feature:62350-62664:1:exon
subclass of: SO_0000010

39477023
type: Gene
SIO_000068: ncbigene

position:62350:1
position: 62350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62664:1
position: 62664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62350-62664:1:exon

At1D132_RS25805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25805
old locus tag: At1D132_49200
inference: COORDINATES: protein motif:HMM:NF016820.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MSFIRLHLQRNIKIYRLLFAATTYMLLSAHPSAAQEFSGITNFIDGIVKALTGPLGIACASIAVIAIGFVFMLGRMDWTFAISVILGIAIVFGGATFVGSLGAM
SIO_010081: At1D132_RS25805
subclass of: SO_0000673
so part of: At1D132_RS25805
location: 62350..62664
location: region:62350-62664:1
so has part: feature:62350-62664:1:exon

WP_111797409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62350-62664:1:exon

At1D132_RS25810
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25810
old locus tag: At1D132_49210
so part of: sequence
location: 62737..63015
location: region:62737-63015:1
so has part: feature:62737-63015:1:exon
subclass of: SO_0000010

39477012
type: Gene
SIO_000068: ncbigene

position:62737:1
position: 62737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63015:1
position: 63015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62737-63015:1:exon

At1D132_RS25810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25810
old locus tag: At1D132_49210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018009845.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB3 family type IV secretion system protein
translation: MQHTPLFIGLTREVTFAGLPIMYLVVLVTATILGFIISQSFLYLLLMGGFGYAALRGLAAYDPKIISVFIATVQQTRMHPGLFTGEGVVYRA
SIO_010081: At1D132_RS25810
subclass of: SO_0000673
so part of: At1D132_RS25810
location: 62737..63015
location: region:62737-63015:1
so has part: feature:62737-63015:1:exon

WP_111797408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62737-63015:1:exon

At1D132_RS25815
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25815
old locus tag: At1D132_49220
so part of: sequence
location: 63125..65359
location: region:63125-65359:1
so has part: feature:63125-65359:1:exon
subclass of: SO_0000010

39477021
type: Gene
SIO_000068: ncbigene

position:63125:1
position: 63125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65359:1
position: 65359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63125-65359:1:exon

At1D132_RS25815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25815
old locus tag: At1D132_49220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018009846.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF87 domain-containing protein
translation: MLRNGDLMASFAVEGINADTMDARHTVELCDSLSRFIAQQRTDVGYYVHRISVETQPRITPVSGHPFNQEVDRRWQEYLQTVGLRDRVTMVTLVIRPPRRITKFVSLFSGKDVYSREEITGRAVRLDQMIKTCMVGLNEAKPARLKVSDGRWLGLLRTAIDGSDVKLIPGAKFVPVSDRLATSQISFQGRVFECHGAGRVRFGTIVSVKDYPNETYPGILDRLNLPYDTVVTQSFTPIDAISAQGKISRVRKQMRAAEDAAVSLLAQLEEAEDDVASGRVVFGEHHCSIALFCDSRAELEQAMAYVTRAMQDAGAAIVRESFSSRSVYFAQHPGNFTYRTRPAMISSQNFAQLCALHGLPKGNPPEKCPWGDAVTIIPTARGETFRFNFHLPGKRDQRTVGHTLVLGQTGSGKTLGTAFLISQAQRLNVRTILFDKDNGFEMAVRAMGGHYSAVRMGAETAFNPMRAEADARGAAWLTDWLTAMVENDGDRLNPVQIQALTDAVQSNSVADRRLQNFEQFRSQLRATDDDGDLYNRLGRWDDTGQFGWLFGGKGLDPLAFDDGVTAFDLSEIFDNDTVRTAWLSYVFRRVERLVEDEHPTLLVLDEAWKLLDDPYFESRLKDWMLTMRKKNVAVVLLTQRVSHIKNSRAGDAILESAVTRLVYPSAFNTEAELAPLHLTPTETSFLQMSNVDNHFVLMKSGADSVVLDLDLGALGKALDILGGGRGEKGPVGWRDRPDFYTEML
SIO_010081: At1D132_RS25815
subclass of: SO_0000673
so part of: At1D132_RS25815
location: 63125..65359
location: region:63125-65359:1
so has part: feature:63125-65359:1:exon

WP_244947142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63125-65359:1:exon

At1D132_RS25820
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25820
old locus tag: At1D132_49230
so part of: sequence
location: 65502..66302
location: region:65502-66302:1
so has part: feature:65502-66302:1:exon
subclass of: SO_0000010

39476984
type: Gene
SIO_000068: ncbigene

position:65502:1
position: 65502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66302:1
position: 66302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65502-66302:1:exon

At1D132_RS25820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25820
old locus tag: At1D132_49230
inference: COORDINATES: protein motif:HMM:NF019608.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MTNTRYIALLSFTALLSVSSATLPVRAQQIIERLADPIIGVIPGAPDDAQLSHDEVSIGQLMKIVELSRVIGGRITQLFNTIVTQTAALEKMRDAQNGVKTIPLHNEPEKAEERAGGSGLNEMAKTALEGLPLEPEAISEALAKFRLDFGLEKAFALKDDGSPSKFFLANGAAQGAIAASTAEVSYKRANSSMDRIPSYINAIENSLDLKTSVDINTRVMIELTQQVNESLRTQSALASMAGTYFMVLGGEVGKQSPFKGLEEYNR
SIO_010081: At1D132_RS25820
subclass of: SO_0000673
so part of: At1D132_RS25820
location: 65502..66302
location: region:65502-66302:1
so has part: feature:65502-66302:1:exon

WP_121652065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65502-66302:1:exon

At1D132_RS25825
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25825
old locus tag: At1D132_49240
so part of: sequence
location: 66306..67487
location: region:66306-67487:1
so has part: feature:66306-67487:1:exon
subclass of: SO_0000010

39476958
type: Gene
SIO_000068: ncbigene

position:66306:1
position: 66306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67487:1
position: 67487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66306-67487:1:exon

At1D132_RS25825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25825
old locus tag: At1D132_49240
inference: COORDINATES: protein motif:HMM:NF016491.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MGLITYISTSIDTTMIGYVEEVFNDIATPMRILLNSMAVLALMFMALNHILQFKTVSMAVYFAWFLRFILIYSVGTFWVNFEGIYNIFVELPSDYSTLLIKSSLSNIKTISTEILDPARITDSATAMDEFTHALTWISSKYLTDVSIWDIGGSIKNVFLGALILIIAGVFTAIAAVVLAFAKIGFAVAMCLAPLAIVLLMMEQTKQYFDSWLRFLVGFVVLPILVTALMSIILYVAGEILASSGASAEHKDRFFAFIFIMAAALILLSQLPTMASTLASSSVAVVGASAASARSMMRNSSRLHSLGQRARDGVGVANSARKAGASPSGIAMSAISGFRQSAGLRQARRDDRLADRMKGTGGEKKAPRRHHEGNSAARTPASTDTPEQQNLNRP
SIO_010081: At1D132_RS25825
subclass of: SO_0000673
so part of: At1D132_RS25825
location: 66306..67487
location: region:66306-67487:1
so has part: feature:66306-67487:1:exon

WP_111797406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66306-67487:1:exon

At1D132_RS25830
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25830
old locus tag: At1D132_49250
so part of: sequence
location: 67522..68196
location: region:67522-68196:1
so has part: feature:67522-68196:1:exon
subclass of: SO_0000010

39476973
type: Gene
SIO_000068: ncbigene

position:67522:1
position: 67522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68196:1
position: 68196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67522-68196:1:exon

At1D132_RS25830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25830
old locus tag: At1D132_49250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018009849.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MTDSDTHHAFEDELFFTLRQQRNNWAKIAIGSVALALLSICCLLVILPLNETRPFVVMVDKTTGQAEKVVEVRPATLDQQDAVRQAELVSYVVDRETFDPADNGIRIPDVMTRSKDNAAETLASLWSASSKQYPPTVYGSDIRVRVVVKSISISPSARRNAPDLARVRITKYREEKGRETAERTFVATVGFTFQPNANAQLQAVWKNPLGFTVVSYRIDAELAG
SIO_010081: At1D132_RS25830
subclass of: SO_0000673
so part of: At1D132_RS25830
location: 67522..68196
location: region:67522-68196:1
so has part: feature:67522-68196:1:exon

WP_111797405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67522-68196:1:exon

At1D132_RS25835
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25835
old locus tag: At1D132_49260
so part of: sequence
location: 68373..68999
location: region:68373-68999:1
so has part: feature:68373-68999:1:exon
subclass of: SO_0000010

39477035
type: Gene
SIO_000068: ncbigene

position:68373:1
position: 68373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68999:1
position: 68999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68373-68999:1:exon

At1D132_RS25835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25835
old locus tag: At1D132_49260
inference: COORDINATES: protein motif:HMM:NF015487.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbG/VirB9 family P-type conjugative transfer protein
translation: MYRLELYLKSVTALQFASGEEVQAILIGDSTSWEVVKLKSGNVVSVKPIVEAGDTNMTIYTDKRVYSFDLHSAGAPKAGAPNVFRSVFTYPVDKKRVPTAPTPDATPVNTDYMLSGTAAFRPDWVQDNGSQTTFYLPKNSPRPAIFKVGADRKEELINSRTNGNRVIVDGTSTYWVLRIGNEVVCVGLGSAVQASGAGKMKAEVRNGI
SIO_010081: At1D132_RS25835
subclass of: SO_0000673
so part of: At1D132_RS25835
location: 68373..68999
location: region:68373-68999:1
so has part: feature:68373-68999:1:exon

WP_244947143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68373-68999:1:exon

At1D132_RS25840
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25840
old locus tag: At1D132_49270
so part of: sequence
location: 68989..70389
location: region:68989-70389:1
so has part: feature:68989-70389:1:exon
subclass of: SO_0000010

39476994
type: Gene
SIO_000068: ncbigene

position:68989:1
position: 68989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70389:1
position: 70389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68989-70389:1:exon

At1D132_RS25840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25840
old locus tag: At1D132_49270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020487238.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbI/VirB10 family protein
translation: MVSNDLQDNDRAGNDAPRGHSTPDREELVGARRQRQQGSSRANKKLIMSVAMICGGVLVFAIGFGSTGLKMIFGQNEDAQRVSEVDMEVGKGRNNDVKLDFIVPGKPVPEVKEVDPNAALNEKLKAMQAQIAEMGKNRPSGVSNSEVQQLLARYTQTMTEKMEAQSKALADENARLRDETMRADELRRKLEEEQALAAADLKERRALDKAQRESDAVVVDEGASAYAAMIGQNGETTPEGDLNANQRFLKSAASSVVQTSVSTNLSDPSRTVVQGTIVSAVLETAIDTQLPGYLRAQVMEPVFSFDGSRILMPQGTVLIGQFNNDVDIAQKRVLIAWNRAVTPDGKSVALGSTGTDKLGRSGTLGNVNNRYMTKFGAAAVISAITIAPSMIADSIGGNDSNRSGTTINVGGSTGGGSGQAIASSVGGSLGEQTNGVMEKYLNLPPVIRVPQGEEIRIFVNRDLVFR
SIO_010081: At1D132_RS25840
subclass of: SO_0000673
so part of: At1D132_RS25840
location: 68989..70389
location: region:68989-70389:1
so has part: feature:68989-70389:1:exon

WP_244632793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68989-70389:1:exon

At1D132_RS25845
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
gene: virB11
locus tag: At1D132_RS25845
old locus tag: At1D132_49280
so part of: sequence
location: 70386..71381
location: region:70386-71381:1
so has part: feature:70386-71381:1:exon
subclass of: SO_0000010

39476971
type: Gene
SIO_000068: ncbigene

position:70386:1
position: 70386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71381:1
position: 71381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70386-71381:1:exon

At1D132_RS25845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
gene: virB11
locus tag: At1D132_RS25845
old locus tag: At1D132_49280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011654614.1
GO component: GO:0043684 - type IV secretion system complex [Evidence IEA]
GO process: GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type DNA transfer ATPase VirB11
translation: MNELVPSREISYVEQYLAPLKEYLTDDRINELVINPNGSIFIEVAGAGFMSEIDVTLSPHSIKRLGATLAGETRNTLGALNPIVSGRVNVWGNPQRVQIVVDPAVEQGVSLSIRKYLSRTLTSADIGFIGGRQIRVDDERRRRHAEIAELANTGDLQGLFRQAIDEHFNILIAGGTSSGKTTVARTLIEMMDRNERLITIEDAPELFPNHRNQVALIADRKDKSARMPSKLLESCLRMRPDRIILGEIRGVEAYDFLEAINTGHPGAVTTIHADSPALAFDRLALMVMRSGVRLSHSEVILYAKRTIDLVVQVGRRHGIRGVLEVYLPSQD
SIO_010081: At1D132_RS25845
subclass of: SO_0000673
so part of: At1D132_RS25845
location: 70386..71381
location: region:70386-71381:1
so has part: feature:70386-71381:1:exon

WP_111808468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70386-71381:1:exon

At1D132_RS27465
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS27465
old locus tag: At1D132_49290
so part of: sequence
location: complement(71777..72772)
location: region:71777-72772:-1
so has part: feature:71777-72772:-1:exon
subclass of: SO_0000010

66225144
type: Gene
SIO_000068: ncbigene

position:71777:-1
position: 71777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72772:-1
position: 72772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71777-72772:-1:exon

At1D132_RS27465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS27465
old locus tag: At1D132_49290
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANTDTGNGPLTPPQDKARPPKRGLISGLKAIAKRVSNTWSRSPQIEFPPRAEYTPPAPPVPGHGQDISKPHAEPKHQQPVAEPIKLEYAEKIPQAYVPHEENQERLRRSLRGKMQTLDEQQAARKEAAALVKVKEIRPSGEIINKGAPSLSPGDTIHPGKRPSPPQSRTPSVDAGVPPLPSPAVSYQTAQEFSARSIRAHEIQVVNIPPPKKSESQPLSRTRSASTISSTASKSSGFSNSSNSSVETTASSVAGAPPPHSSAVNASHMSQEAEKSIKLREVQTVGISSSNRPEDARARPSPTDLSIGRDHQKSLSRPSLNPRVRSDGRGI
SIO_010081: At1D132_RS27465
subclass of: SO_0000673
so part of: At1D132_RS27465
location: complement(71777..72772)
location: region:71777-72772:-1
so has part: feature:71777-72772:-1:exon

WP_162688298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71777-72772:-1:exon

At1D132_RS25850
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25850
old locus tag: At1D132_49300
so part of: sequence
location: complement(72803..73537)
location: region:72803-73537:-1
so has part: feature:72803-73537:-1:exon
subclass of: SO_0000010

39476951
type: Gene
SIO_000068: ncbigene

position:72803:-1
position: 72803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73537:-1
position: 73537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72803-73537:-1:exon

At1D132_RS25850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25850
old locus tag: At1D132_49300
inference: COORDINATES: protein motif:HMM:NF018839.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirC2 family conjugal transfer protein
translation: MAIHKPSLTVTEARRLAKINSALGEVDGDLTPAILPEKLEVTPAPKPVRVKQETTSASQQLKSPFSFLTTAEKPAKPERVEGPAPVQTSTAPSEGSRTGDTPCPRRFSGPSPFAIVGASDCSPLTEEKVQVYVSALHPAPGVSVMFDALLANYPSRKALQMILRRALHDYDLSLESGEFLKYEAGYKINPATAESPIQTSRMMPKKILALAREHFDPLGLESTRAFGRKLATAALAAFFARHRP
SIO_010081: At1D132_RS25850
subclass of: SO_0000673
so part of: At1D132_RS25850
location: complement(72803..73537)
location: region:72803-73537:-1
so has part: feature:72803-73537:-1:exon

WP_111808466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72803-73537:-1:exon

At1D132_RS25855
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25855
old locus tag: At1D132_49310
so part of: sequence
location: complement(73539..74234)
location: region:73539-74234:-1
so has part: feature:73539-74234:-1:exon
subclass of: SO_0000010

39476986
type: Gene
SIO_000068: ncbigene

position:73539:-1
position: 73539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74234:-1
position: 74234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73539-74234:-1:exon

At1D132_RS25855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25855
old locus tag: At1D132_49310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011654600.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer ATPase VirC1
translation: MKLITFCSFKGGAGKTTALMGLCSALAAEGKTVALFEADENRPLTRWHENATRRGTWDPSCEVFVADELSLLEDAYERAEARDFDYALVDTQGGSSELNNTIIASSNFLLVPTMLTPLDVDEALATYRYIIELLLGENLAIPTAILRQRVPVSRLTTSQRAVWEVLNSLPLTERPLHERDAFAAMKERGMLHLSVRNASGEPAMRLSLRNLEVAMEELRGLSQFVQNTVGN
SIO_010081: At1D132_RS25855
subclass of: SO_0000673
so part of: At1D132_RS25855
location: complement(73539..74234)
location: region:73539-74234:-1
so has part: feature:73539-74234:-1:exon

WP_111808520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73539-74234:-1:exon

At1D132_RS25860
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
gene: virD4
locus tag: At1D132_RS25860
old locus tag: At1D132_49320
so part of: sequence
location: complement(74841..76877)
location: region:74841-76877:-1
so has part: feature:74841-76877:-1:exon
subclass of: SO_0000010

39476965
type: Gene
SIO_000068: ncbigene

position:74841:-1
position: 74841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76877:-1
position: 76877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74841-76877:-1:exon

At1D132_RS25860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
gene: virD4
locus tag: At1D132_RS25860
old locus tag: At1D132_49320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032488284.1
note: The ATPase VirD4 is a core component of the VirB/VirD4 form of type IV secretion systems (T4SS), also known as type IVa secretion systems; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system ATPase VirD4
translation: MDAHGKWTALVLGVVFSLIVGAFLATIYAAFQSGMGVRTFQNFDVLAFWRELPFSKGYTTPVFKRGLIIIAATGVVLPLILGVILLRKQEHHGTAHWARFADLAHAGYIKRYRQVNGPIFGKTTGPRGFGRYLTNGDQPHSLVVAPTRAGKGVGIVIPTLLTFNGSILALDVKGELFELTSRSRLARGDRVYKFAPFDEAGRTHSYNPVLDIVNMPPDRRFSETRRLAYNLIAAKGKGSEGFIDGARDLFVAGILACIERGTPTIGAVYDLFAQPGEKYKLFAQLAEETKSAEAQRIFDNMAGNDTKILTSYTSVLGDGGLNLWADPMIKAATTTSDFSIYDLRRDPTSIFLCVSPNDLEVIAPLVRLFFQQVVSILQRSMPGKDEIFEVLFLLDEFKHLGKLESIETAVTTIAGYKGRFMFIIQSLAALTGAYEESGKENFLSNTGLQVFMATADDETPTYISKSIGDYTYRERSTSYSQSNIFDTNVQLSNQGAPLMRPEQVRVIEDTKQIVLIKGQPPLRMDKVKYYSDRVLKRLFDAQTGPLPEPDPVEMDQFATQPLDKTFENAPVVSTPASVEESQAFFPEDPAETSETAFSAPADEPSGAGGGDSLEFGPAPDAPAVTAPEPVTEPPRLTEQEMQALNRQRLILDRIIALQKGGAHHRVPSPEPNSEVDYS
SIO_010081: At1D132_RS25860
subclass of: SO_0000673
so part of: At1D132_RS25860
location: complement(74841..76877)
location: region:74841-76877:-1
so has part: feature:74841-76877:-1:exon

WP_111808464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74841-76877:-1:exon

At1D132_RS25865
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25865
old locus tag: At1D132_49330
so part of: sequence
location: complement(76975..78657)
location: region:76975-78657:-1
so has part: feature:76975-78657:-1:exon
subclass of: SO_0000010

39477050
type: Gene
SIO_000068: ncbigene

position:76975:-1
position: 76975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78657:-1
position: 78657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76975-78657:-1:exon

At1D132_RS25865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25865
old locus tag: At1D132_49330
inference: COORDINATES: protein motif:HMM:NF015397.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MEYLTRKKNPAERQRAQLPELQLQFSERHGAGFIPYDELPDWARRWGEQTGNYIRGQQVGDAEQDMTSHIIFSLPAGTDKLAAHRAMRKAAEDVFGATIIREGDRGNPHEFDYLTAFHTDKPHPHLHVLVNRKSLQRDPDTKKHEWLKIARRNTRINYAVMRERFAYWAQQEGIDVEATSRLERGIETPSTSNEQFRINARNAVEVREQWGDLSVMAFDPTSQSRSATPEPAAGPSVQRPQSSEPASGQSGGGTGGDANSRLDISVGSNGSKQFRDHDNTHLTPNADPASIAHPFSPGISVGTASNPAHGEPTGSSSAGGPESSNNLVDTQRSREVERQRREQAAHGRSTREAKDAEGDRSRRRTPQNASPPESSSGSRLRSAIDDERNNEIARQQRERIERDHAAREVEDAEGDRDRRRIPANSSLSPERDDGQSVTGLQENASAERADLSPPPASLDARPDISDNQPIANEQFQFTFGATPNGDGGGPSGNDADLPDETSAQAAARRAAARARRRGDDLDRVVRTRGQKNADELKRIEDAPVSGRLRISTRPRPVRTR
SIO_010081: At1D132_RS25865
subclass of: SO_0000673
so part of: At1D132_RS25865
location: complement(76975..78657)
location: region:76975-78657:-1
so has part: feature:76975-78657:-1:exon

WP_162992500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76975-78657:-1:exon

At1D132_RS25870
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25870
old locus tag: At1D132_49340
so part of: sequence
location: complement(78778..79233)
location: region:78778-79233:-1
so has part: feature:78778-79233:-1:exon
subclass of: SO_0000010

39477048
type: Gene
SIO_000068: ncbigene

position:78778:-1
position: 78778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79233:-1
position: 79233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78778-79233:-1:exon

At1D132_RS25870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25870
old locus tag: At1D132_49340
inference: COORDINATES: protein motif:HMM:NF018977.2
GO function: GO:0004519 - endonuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA mobilization endonuclease VirD1/MobC family subunit
translation: MKDVENAQTSQREIPLIHHSTRAAPEPYKIVSVRLREAEFEAFSEQASEFGLTNNMALRVAARRIGGFVEIDMGTREVLEGILKSISEISRDIARMHATSMQSGVVDIAEFAKLRAGFGYEFARLDATLMSILNIAERRLDGRLRLQEAAK
SIO_010081: At1D132_RS25870
subclass of: SO_0000673
so part of: At1D132_RS25870
location: complement(78778..79233)
location: region:78778-79233:-1
so has part: feature:78778-79233:-1:exon

WP_111808461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78778-79233:-1:exon

At1D132_RS25880
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25880
old locus tag: At1D132_49360
so part of: sequence
location: 80153..81559
location: region:80153-81559:1
so has part: feature:80153-81559:1:exon
subclass of: SO_0000010

39476976
type: Gene
SIO_000068: ncbigene

position:80153:1
position: 80153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81559:1
position: 81559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80153-81559:1:exon

At1D132_RS25880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25880
old locus tag: At1D132_49360
inference: COORDINATES: protein motif:HMM:NF018885.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirE2 family protein
translation: MTNDGNDRHMSGQNSGSDFLGDFSSPIGANSNIRRDAWVLFKDGAIPQGVTRGQWLERNDGLAPTNSQFERNGYAIHASLTGNTKLRNVSGEFGEHDYMPPQVFVHQIPLSEEQRQIVDSAKDDEKHKKAFGFRAAKFRAIAEQNGFPGDIPKFLKDLEGKDRVFHTIGGGSQPCVKQYDNQVRAGNTIPNVQIWKGTELLEVAWHTKEGKGKYDGKSLDEVKATAIASYGEGVEVALKSNTNRTMGTAQLDLYGNGASNRWKAQVTQEHERNANFNHLTAVITQKDSSIPSQNFDFKWLRDNAPDHPLTKGLLEGKYSEHLRVIGSGNGRTNVQFAVSKFPYATKLLEEAGIPREIAEVRPDDYWKMKEIGKTLPPVSVPLTKHIDGAPPPGVDVMSSFAPEAIMIAARDKNGDRTGMQRTLSEYATQKLRLPDDAAAALNREPDMYSRATLYDDRPRGQNSRVSGY
SIO_010081: At1D132_RS25880
subclass of: SO_0000673
so part of: At1D132_RS25880
location: 80153..81559
location: region:80153-81559:1
so has part: feature:80153-81559:1:exon

WP_111808459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80153-81559:1:exon

At1D132_RS25885
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25885
old locus tag: At1D132_49370
so part of: sequence
location: 81795..83726
location: region:81795-83726:1
so has part: feature:81795-83726:1:exon
subclass of: SO_0000010

39476948
type: Gene
SIO_000068: ncbigene

position:81795:1
position: 81795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83726:1
position: 83726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81795-83726:1:exon

At1D132_RS25885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25885
old locus tag: At1D132_49370
inference: COORDINATES: protein motif:HMM:NF018377.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADIEKNPAKLRDSKYKSRVVQNFESDLALAADITKLNAERRIGKYSGSGKSDRYKKDLDLFEKIDPSKRDTIIRSRPWGWGNKKLRIDKDGAFIRERGRFRKTRKTLSRDAESGVVVSGFEQESFRKKTTESYRNGGLLAKNVTRKDGSYEENWELSNGGKLIRTKYQTSRIRDGGLFRSISENLSVADTNGYRTLTRKKGGLFKNEKVFETDENGENLNLVGRKNRIFSKYSQISKNRDFANVDIKHFGGLWSKSYSSRLDADGNAISKDMGARRKILSKRSLRYEKGQLESHVHTFGGSKLYKHSVDYTAGDGLKTIKKKLFGLTIYKDTVNLSEREAAANDLRKAEAEEHHALWKAEVAGREAAPKAPAGEEAARDSAIKVYAVPAPGTTMRLGTTSVLPMPPTKSGRFPFASGVVFPTAPAPSTHQRGSSATEPDAPKSTLLAPSHQNSVEVDKIARPAPEEEEDEDVAFLKKSASPSPSRTASKSANAESHAFLGDWKPVSGGDEAEKRTSTSPSRTASRSADAESHAFLGDWKPVGRGDEAEKRTPTSPSRTASKSADAESQAFLGDWKPVGRSDEAEKTTPASREISVAGERAAVNIWAPSGTRRIGHYDTDGTDAASKRGLEPRNRGVASVADW
SIO_010081: At1D132_RS25885
subclass of: SO_0000673
so part of: At1D132_RS25885
location: 81795..83726
location: region:81795-83726:1
so has part: feature:81795-83726:1:exon

WP_162688296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81795-83726:1:exon

At1D132_RS25890
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25890
old locus tag: At1D132_49380
so part of: sequence
location: 84066..86366
location: region:84066-86366:1
so has part: feature:84066-86366:1:exon
subclass of: SO_0000010

39477054
type: Gene
SIO_000068: ncbigene

position:84066:1
position: 84066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86366:1
position: 86366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84066-86366:1:exon

At1D132_RS25890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25890
old locus tag: At1D132_49380
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MENGSADGPAKRRADSLNSDGPARPSGRVKRLKSSASGRDEWPAGQLENSILESIEHDPDVDLPESIAFGNDGDDERELSWSLSPDRTPAARQIDRSGPISKSEEERAVSEHVASPFIPLPAREPKPVNTLHSYFRGAAFEPKAGEVKGKRAKDKGKKKTEPRRTMRSYHRGSHDGMVLISDLEQLRKVARLGTGAKEVVFRTKGQFERHFGKPPTSADMDDTCTITSFEPGIYRSKPRTWNTIEVEKREDWRDEYQERDWKFASLMSKVGQSGEPFKERVVTGLLSGDMGKFQTPVGARRRNHAYREALKAGQYNPDVLIHLDDGTYKAIFLKLYEGTRDMASFKAVTDKYGENNVWLKTANFEYMTRDQFNKNATTFDAAEKMFCEYTGRTYEPNVFVRSSEGKWLSKKRYDEKNQNNFDEDLTELELLILGDHNQGFLQPKTMKWLNPELYEQRMRAAHLTGYVPTNTSFASSRGAVKMEAISDILANKNNSSSAPILMQISREELEPIDKVPKDAEHHQIYPQNVSEKSGYTGNYTRNWRSIRREEKFRDANNQSEWCFDTSSALQKPKRLMTDEQRKIVKTPSPSPAQSEVSEDELFVRQSSVSLPPDTSDDETRSAPSSRRRRFDSLPPDSSDDEPEALDRGSVERPPGAKSDGGTSRPSITMRQPSVPQANSVGGRGKTNGNPVMERRLAQAPQFAWLSASSDDDSSVTANPAKLYSPRGHQAEGAASRGTSAETITQQASPSPPFDNGRSRSRDLSRG
SIO_010081: At1D132_RS25890
subclass of: SO_0000673
so part of: At1D132_RS25890
location: 84066..86366
location: region:84066-86366:1
so has part: feature:84066-86366:1:exon

WP_121652069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84066-86366:1:exon

At1D132_RS27470
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS27470
old locus tag: At1D132_49390
so part of: sequence
location: 87105..88208
location: region:87105-88208:1
so has part: feature:87105-88208:1:exon
subclass of: SO_0000010

66225145
type: Gene
SIO_000068: ncbigene

position:87105:1
position: 87105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88208:1
position: 88208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87105-88208:1:exon

At1D132_RS27470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS27470
old locus tag: At1D132_49390
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADDKIARLINSIPRLGRRAGREADGQQSDPLQAVRDPLLPDKVGWRLLSPHIRKTKLPLYTELAIPDGNSVLLLHEYEFNERQLDQIRHNVGRARANVAAGIDALACKDSSQYDSRTAALLKRHFLLDVDKGATGDDFDADGNPDPKPDTMLVTDNILRRLRKISAGLDGPNVEIKVLDDLRTRSPEATEHTDGLARMRFSRDETPRVSFRIRTVEVFDAERGPQVMIHETAHNVAALDDHGERGYFDSYLTAGQPMRYRESGLTSCEALRNADTYAGFCCDLQRCPPSVKWSLPSTEVLHFGSNEPEDRFKHGVSASAGISTMADGEHADSVRGGTDSTAARPSSRTRNADSGGLVERERSSLGR
SIO_010081: At1D132_RS27470
subclass of: SO_0000673
so part of: At1D132_RS27470
location: 87105..88208
location: region:87105-88208:1
so has part: feature:87105-88208:1:exon

WP_162992501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87105-88208:1:exon

At1D132_RS25905
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25905
pseudo: true
so part of: sequence
location: complement(89034..90567)
location: region:89034-90567:-1
so has part: feature:89034-90567:-1:exon
subclass of: SO_0000010

39476954
type: Gene
SIO_000068: ncbigene

position:89034:-1
position: 89034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90567:-1
position: 90567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89034-90567:-1:exon

At1D132_RS25905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25905
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011983001.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: At1D132_RS25905
subclass of: SO_0000673
so part of: At1D132_RS25905
location: complement(89034..90567)
location: region:89034-90567:-1
so has part: feature:89034-90567:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89034-90567:-1:exon

At1D132_RS25910
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25910
old locus tag: At1D132_49430
pseudo: true
so part of: sequence
location: complement(90719..>91126)
location: region:90719-91126:-1
so has part: feature:90719-91126:-1:exon
subclass of: SO_0000010

39477029
type: Gene
SIO_000068: ncbigene

position:90719:-1
position: 90719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91126:-1
position: 91126
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90719-91126:-1:exon

At1D132_RS25910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25910
old locus tag: At1D132_49430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330531.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-binding protein
SIO_010081: At1D132_RS25910
subclass of: SO_0000673
so part of: At1D132_RS25910
location: complement(90719..>91126)
location: region:90719-91126:-1
so has part: feature:90719-91126:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90719-91126:-1:exon

At1D132_RS25915
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25915
so part of: sequence
location: complement(91577..92050)
location: region:91577-92050:-1
so has part: feature:91577-92050:-1:exon
subclass of: SO_0000010

39476977
type: Gene
SIO_000068: ncbigene

position:91577:-1
position: 91577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92050:-1
position: 92050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91577-92050:-1:exon

At1D132_RS25915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25915
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDNMQLSFSFVSLQPTSKALFDTIVYSSGDAIDFKIARTWLHGFPFHEPSSSHIADAFILRDRLTTQPAIVIATSWSDMLIFELFDKVEDILLVISADDNAPRARMPHSRILLLRSGYSVPEIYRAIDRAMGPYMEENEHYGTTDDESIGSQEEDSD
SIO_010081: At1D132_RS25915
subclass of: SO_0000673
so part of: At1D132_RS25915
location: complement(91577..92050)
location: region:91577-92050:-1
so has part: feature:91577-92050:-1:exon

WP_111808451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91577-92050:-1:exon

At1D132_RS25920
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25920
pseudo: true
so part of: sequence
location: complement(<93223..>93651)
location: region:93223-93651:-1
so has part: feature:93223-93651:-1:exon
subclass of: SO_0000010

39476963
type: Gene
SIO_000068: ncbigene

position:93223:-1
position: 93223
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:93651:-1
position: 93651
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93223-93651:-1:exon

At1D132_RS25920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611960.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: At1D132_RS25920
subclass of: SO_0000673
so part of: At1D132_RS25920
location: complement(<93223..>93651)
location: region:93223-93651:-1
so has part: feature:93223-93651:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93223-93651:-1:exon

At1D132_RS25920
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 1176649
locus tag: At1D132_RS25920
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01497
inference: COORDINATES: profile:INFERNAL:1.1.4
note: AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: At1D132_RS25920
subclass of: SO_0000673
so part of: At1D132_RS25920
location: complement(93425..93541)
location: region:93425-93541:-1
so has part: feature:93425-93541:-1:exon

position:93425:-1
position: 93425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93541:-1
position: 93541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93425-93541:-1:exon

At1D132_RS25925
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25925
old locus tag: At1D132_49470
so part of: sequence
location: 93825..95189
location: region:93825-95189:1
so has part: feature:93825-95189:1:exon
subclass of: SO_0000010

39477052
type: Gene
SIO_000068: ncbigene

position:93825:1
position: 93825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95189:1
position: 95189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93825-95189:1:exon

At1D132_RS25925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25925
old locus tag: At1D132_49470
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDTTIKEKKRKHKALADEMRSAGSSGRPDSAASVIVSSEAPAQPGTSQARVVDGGKRRRLGNDADRRPIKRLQYSKNIAIDAVDAALNRASTAPDTSPRKTDINAIPAETFALIGAYVGLNALEMGRYELTKLRLLNRASKASIDNLPEIKKVEPTLHAVQTTRYLIESAHIKRKRQDDFFEYSKEDGNGDPETWTKGYLHGHVEDIYAVMKFSDPDYNSALLRAALKEAGQVNLQSQGGMLYRFALNAKEFNRAEREAIADASVEILESRKGGQIPAAKAYLHLRDHLSDDEALQNHLRTLDPELEYKFRSVFRRAEEERAVPTTGGVSAEAQRKCIDLHCIRDAASYRSAHGSAWNSYKEEIADKFKREVRGEFKKEVEAELLTKAAVGLRGTDEGVKTEDAALAIREELYDVMSYREAEKSLAIATRETISSSEKRATLLERSRRMEGRAE
SIO_010081: At1D132_RS25925
subclass of: SO_0000673
so part of: At1D132_RS25925
location: 93825..95189
location: region:93825-95189:1
so has part: feature:93825-95189:1:exon

WP_162992502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93825-95189:1:exon

At1D132_RS25930
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25930
pseudo: true
so part of: sequence
location: <95333..95490
location: region:95333-95490:1
so has part: feature:95333-95490:1:exon
subclass of: SO_0000010

39477039
type: Gene
SIO_000068: ncbigene

position:95333:1
position: 95333
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:95490:1
position: 95490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95333-95490:1:exon

At1D132_RS25930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330531.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-binding protein
SIO_010081: At1D132_RS25930
subclass of: SO_0000673
so part of: At1D132_RS25930
location: <95333..95490
location: region:95333-95490:1
so has part: feature:95333-95490:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95333-95490:1:exon

At1D132_RS25935
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25935
old locus tag: At1D132_49490
so part of: sequence
location: complement(96101..96463)
location: region:96101-96463:-1
so has part: feature:96101-96463:-1:exon
subclass of: SO_0000010

39476987
type: Gene
SIO_000068: ncbigene

position:96101:-1
position: 96101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96463:-1
position: 96463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96101-96463:-1:exon

At1D132_RS25935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25935
old locus tag: At1D132_49490
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKSTNTPFNIRVFDTLYHLKSPDTSVVPPEKSDSGAWEVLDLAKEKFMELYTDHDFSSEQFVQLLAAMEMAFNLGLSEGREECQAAAISLLQSFDDEVIVSVLNNMDEDDSEQPAPETV
SIO_010081: At1D132_RS25935
subclass of: SO_0000673
so part of: At1D132_RS25935
location: complement(96101..96463)
location: region:96101-96463:-1
so has part: feature:96101-96463:-1:exon

WP_111808447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96101-96463:-1:exon

At1D132_RS25940
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25940
old locus tag: At1D132_49500
so part of: sequence
location: complement(96562..97197)
location: region:96562-97197:-1
so has part: feature:96562-97197:-1:exon
subclass of: SO_0000010

39477008
type: Gene
SIO_000068: ncbigene

position:96562:-1
position: 96562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97197:-1
position: 97197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96562-97197:-1:exon

At1D132_RS25940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25940
old locus tag: At1D132_49500
inference: COORDINATES: protein motif:HMM:NF024895.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane beta-barrel protein
translation: MKKSITMAIAISALSFSFGRAADLIEPPLILAPPFQNAPQGYDWGGGYVGVNVGFGNLQGVFTDSCNCEDAAEAMGRQVGLFVGRNWQILDGTWMGIEGDISRKWTEIHYFGSRVGTDLAGSVRLRVGEEVGNALVYAAFGWTGANIYVQNPGDTTFTQGWTLGAGIDWALTDKTVLRAEYRFNNYSPATLAGVDVDFDEDVISIGIAHKF
SIO_010081: At1D132_RS25940
subclass of: SO_0000673
so part of: At1D132_RS25940
location: complement(96562..97197)
location: region:96562-97197:-1
so has part: feature:96562-97197:-1:exon

WP_111808445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96562-97197:-1:exon

At1D132_RS25945
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25945
old locus tag: At1D132_49510
pseudo: true
so part of: sequence
location: <97494..97970
location: region:97494-97970:1
so has part: feature:97494-97970:1:exon
subclass of: SO_0000010

39477031
type: Gene
SIO_000068: ncbigene

position:97494:1
position: 97494
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:97970:1
position: 97970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97494-97970:1:exon

At1D132_RS25945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25945
old locus tag: At1D132_49510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005800888.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-binding protein
SIO_010081: At1D132_RS25945
subclass of: SO_0000673
so part of: At1D132_RS25945
location: <97494..97970
location: region:97494-97970:1
so has part: feature:97494-97970:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:97494-97970:1:exon

At1D132_RS25950
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25950
old locus tag: At1D132_49520
so part of: sequence
location: complement(98961..100187)
location: region:98961-100187:-1
so has part: feature:98961-100187:-1:exon
subclass of: SO_0000010

39477027
type: Gene
SIO_000068: ncbigene

position:98961:-1
position: 98961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100187:-1
position: 100187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98961-100187:-1:exon

At1D132_RS25950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25950
old locus tag: At1D132_49520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012382807.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MAVRKLNLKPREAFAELTLHEKNSYLQDIATQIADAKGDEYLPLDKDALARLRRYYSRRSMADLKLAEVPGPLRGRLQRIADGIRTDEVQKIFSHELHPKLKRSTFTRAAPIDDDQLMFFVPAVQDAPIKDDFNLMDIAPFSLSKSGGTGVIRYELKDSIITIEGGAEVGLATAYDYDIVINMISHLAEATRRYRVDDLKGLKPSIPSNLYRPSASEILKFCRRELGGKQYEDLERALARLQATHIRITNIKGNNGRERRATESFNLIGRWKVVSRTNQDRIDRIEIEIPTWLYEGVVRPDGKPTILTLNPDYFLLSRPIARFIYRLARKAAGETFACYSLTELKKRCAAKVPMRKFRKTIEDIVETSRTTPLPDYDLSLEDRGHDIMLHMTKRNRTNSLEMAFPSLT
SIO_010081: At1D132_RS25950
subclass of: SO_0000673
so part of: At1D132_RS25950
location: complement(98961..100187)
location: region:98961-100187:-1
so has part: feature:98961-100187:-1:exon

WP_121652072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98961-100187:-1:exon

At1D132_RS25955
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25955
old locus tag: At1D132_49530
so part of: sequence
location: complement(100922..102532)
location: region:100922-102532:-1
so has part: feature:100922-102532:-1:exon
subclass of: SO_0000010

39477038
type: Gene
SIO_000068: ncbigene

position:100922:-1
position: 100922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102532:-1
position: 102532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100922-102532:-1:exon

At1D132_RS25955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25955
old locus tag: At1D132_49530
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAAALVYEKVLKHLNFIQNLEKKDSSRAHSLLSAFLKQETEGRDLPNDVIVSANALNEEDLEVVNSLRKIAAECREIEAALNREWAGLPEAAKSILKKNARETYNKCVAFSDGMPLWQSLLYGASTTLSIVWDLWTVIKVPDTSLFPRVVPFLVGTVPITIGYLIAPGANWKQFYEAIFQDRVILGIPARGVLSYGIEHSEFYSDKPKYLATVGTLSVSFMLALNMPRPIIETKDNRTMSQIGRSDGGEEAGGRDVAMTAQLEGAAARLDDLQQKLKSVALHIALGQGTSDALSRIASQTKRVSALLLRSANKYVTVKHNDHGKKFAIVMAWDALLATMIGAASGNQAQIGALIPYIAFAQRRMLEVLFDSSQGVEEMSNLFARSGATAFYQFFGVSVPLLARGRTAFDDGKMKGAMTGSLIFITLSVMQYTPDVMFWAGGVARRLCRRRAINDASHHSDDASHNSDDDEFFDAEDGTDIEDFFDALSDLTAHQHSEEEEEDFFDALATQAGAEASQTIADLVSEIRTGGERSVTQ
SIO_010081: At1D132_RS25955
subclass of: SO_0000673
so part of: At1D132_RS25955
location: complement(100922..102532)
location: region:100922-102532:-1
so has part: feature:100922-102532:-1:exon

WP_111808441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100922-102532:-1:exon

At1D132_RS25960
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25960
old locus tag: At1D132_49540
so part of: sequence
location: complement(103473..104639)
location: region:103473-104639:-1
so has part: feature:103473-104639:-1:exon
subclass of: SO_0000010

39476992
type: Gene
SIO_000068: ncbigene

position:103473:-1
position: 103473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104639:-1
position: 104639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103473-104639:-1:exon

At1D132_RS25960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25960
old locus tag: At1D132_49540
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPVSTASSHDSLHIEELCPGIDHLRFERTPGWQTGHNDERVSRVLSMMKDKGALSVVQVSKPETTISSPTGGIAAPLDLIKRLEGPFLAVNGGFFIHLPYLFRTNEGHLMTHDKLNFTVGPTSATEETGKYVPIPEAYADELKKREMTDNTFLHTGPSLNQLMEFEDVSFKDINTPLGRFRYFAMSPEGEKIASPVFFDLKKFDEQYEEWAKDEDFQGATTMQRKTEEEWLADAMKKQTIGDNGELAYASRPPANAHIKSVWASIPGNLSHLTEPNERSGVSRHKRAWVFAAYNSKRNEGLTMNEFSSLFKEVLALLGHTIGNDDDIWANDGGPSIFQIFKDKDGSIKLLAQGDLSQQKRVMALDPSTMRKVPNAMVAFPKATEGEEI
SIO_010081: At1D132_RS25960
subclass of: SO_0000673
so part of: At1D132_RS25960
location: complement(103473..104639)
location: region:103473-104639:-1
so has part: feature:103473-104639:-1:exon

WP_162688293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103473-104639:-1:exon

At1D132_RS25970
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25970
old locus tag: At1D132_49550
so part of: sequence
location: 105289..105669
location: region:105289-105669:1
so has part: feature:105289-105669:1:exon
subclass of: SO_0000010

39477000
type: Gene
SIO_000068: ncbigene

position:105289:1
position: 105289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105669:1
position: 105669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105289-105669:1:exon

At1D132_RS25970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25970
old locus tag: At1D132_49550
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYDFSAFTKSLEENFEAVKRAYESKRNLNGNQLLCDDRETLDILSDAFAKANKLIKKSEDQWKACVANLKRVLEELERLEEMETLEELDKRTYDETKEAVQKIIDRVAQLEEELEVSLLTPLLERS
SIO_010081: At1D132_RS25970
subclass of: SO_0000673
so part of: At1D132_RS25970
location: 105289..105669
location: region:105289-105669:1
so has part: feature:105289-105669:1:exon

WP_111808436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105289-105669:1:exon

At1D132_RS25980
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25980
old locus tag: At1D132_49560
so part of: sequence
location: 106494..106904
location: region:106494-106904:1
so has part: feature:106494-106904:1:exon
subclass of: SO_0000010

39476940
type: Gene
SIO_000068: ncbigene

position:106494:1
position: 106494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106904:1
position: 106904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106494-106904:1:exon

At1D132_RS25980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25980
old locus tag: At1D132_49560
inference: COORDINATES: protein motif:HMM:NF013677.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MTKHPIEVITSVERRRRWSREEKEGLVAACLEPDAVISEIARTAGIHVSQLFRWRKELCRIEEPQTETGTVLVPVIVSEAASTASPVQAESPTTSHLRRKRSDVMIELGRGRRVHIDSDIDKEALGRILDCVLGLR
SIO_010081: At1D132_RS25980
subclass of: SO_0000673
so part of: At1D132_RS25980
location: 106494..106904
location: region:106494-106904:1
so has part: feature:106494-106904:1:exon

WP_111808432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106494-106904:1:exon

At1D132_RS25985
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
gene: tnpB
locus tag: At1D132_RS25985
old locus tag: At1D132_49570
so part of: sequence
location: 106901..107248
location: region:106901-107248:1
so has part: feature:106901-107248:1:exon
subclass of: SO_0000010

39476943
type: Gene
SIO_000068: ncbigene

position:106901:1
position: 106901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107248:1
position: 107248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106901-107248:1:exon

At1D132_RS25985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
gene: tnpB
locus tag: At1D132_RS25985
old locus tag: At1D132_49570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011749831.1
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MIPVPSGVKVWLATGYTDMRKGFPGLSLMVQEALKRDPMCGHLFVFRGRGDGLIKVIWHDGQGACLFTKKLERGRFIWPSAADGAVVITPAQLGYLLEGIDWRMPQKTWRPTSAG
SIO_010081: At1D132_RS25985
subclass of: SO_0000673
so part of: At1D132_RS25985
location: 106901..107248
location: region:106901-107248:1
so has part: feature:106901-107248:1:exon

WP_111808430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106901-107248:1:exon

At1D132_RS25990
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25990
old locus tag: At1D132_49580
pseudo: true
so part of: sequence
location: 107294..108944
location: region:107294-108944:1
so has part: feature:107294-108944:1:exon
subclass of: SO_0000010

39477003
type: Gene
SIO_000068: ncbigene

position:107294:1
position: 107294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108944:1
position: 108944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107294-108944:1:exon

At1D132_RS25990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25990
old locus tag: At1D132_49580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_046205714.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS66-like element IS66 family transposase
SIO_010081: At1D132_RS25990
subclass of: SO_0000673
so part of: At1D132_RS25990
location: 107294..108944
location: region:107294-108944:1
so has part: feature:107294-108944:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:107294-108944:1:exon

At1D132_RS25995
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS25995
old locus tag: At1D132_49590
so part of: sequence
location: complement(108993..109898)
location: region:108993-109898:-1
so has part: feature:108993-109898:-1:exon
subclass of: SO_0000010

39477055
type: Gene
SIO_000068: ncbigene

position:108993:-1
position: 108993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109898:-1
position: 109898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108993-109898:-1:exon

At1D132_RS25995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS25995
old locus tag: At1D132_49590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018093834.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ROK family protein
translation: MIACFDIGGTAIKSGFANSIHNVRPFRREMTPRSNFGDFIACLTTVLDEAPEKPEAISISLAGSVEPRTGNWKVANIPCLDGLAVEEEIGRALQLPVTVFNDADCCALAESAFGAGRGHRIVFSIILGTGIGGGLVVQDKLINDTDAFAGEWGHGFSQNVSQIPQFACGCGLLGCLDAMCGARGIERLHHHFTGDDQDAQTILQNWELGEKGVSHTIEVVLEMLAGPLALVANVTGATVIPAGGGMSNCVPLVHALDLKVRRRTLRDFDRPLVVPAECRVEPGLIGAALVGFTKRNPCVTR
SIO_010081: At1D132_RS25995
subclass of: SO_0000673
so part of: At1D132_RS25995
location: complement(108993..109898)
location: region:108993-109898:-1
so has part: feature:108993-109898:-1:exon

WP_111808518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108993-109898:-1:exon

At1D132_RS26000
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS26000
old locus tag: At1D132_49600
so part of: sequence
location: 109952..111295
location: region:109952-111295:1
so has part: feature:109952-111295:1:exon
subclass of: SO_0000010

39476979
type: Gene
SIO_000068: ncbigene

position:109952:1
position: 109952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111295:1
position: 111295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109952-111295:1:exon

At1D132_RS26000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS26000
old locus tag: At1D132_49600
inference: COORDINATES: protein motif:HMM:NF024808.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: extracellular solute-binding protein
translation: MVIAQLTSNNFRDGNKFEANRGRCFGMIRGYLMFGLAVAAANSATAETLRYMSFDPVQLEAERPAIAAFEASHPGLKVQAQALPQKDYWTNVSAQAASGTLPDVMMMSSAYIYQWAASGNLADLNSFAGELNLEGYTESAVDVARVKGGLYAIPQSWSGAVLYYNKDAFDAAGISYPTATWTWDQFRDAAKKLTVDKNGDGEPEQWGYYITGRYAQVDGWVYRNGGRYLTPDSTAMDPDPAALKTLKFLTDLVVKDKVAPKPKDLEGVRFLDVFPLGMAAMWVDGAWNISSNRTTIGSKFKWGIAEIPRGPDATDATVRNYAWPDLLSVAETSTKKYLAVEFIEHMTQASRSAKDFKGGKVPAFKEVASKPEWLERDQQPDNKEVILQLGEGKLYNGFAKNWDGWRGYGASGSGGVNGELDEVFNGRKSLDDAVKSFVSYSNDVLKR
SIO_010081: At1D132_RS26000
subclass of: SO_0000673
so part of: At1D132_RS26000
location: 109952..111295
location: region:109952-111295:1
so has part: feature:109952-111295:1:exon

WP_111808428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109952-111295:1:exon

At1D132_RS26005
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS26005
old locus tag: At1D132_49610
so part of: sequence
location: 111463..112233
location: region:111463-112233:1
so has part: feature:111463-112233:1:exon
subclass of: SO_0000010

39477028
type: Gene
SIO_000068: ncbigene

position:111463:1
position: 111463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112233:1
position: 112233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111463-112233:1:exon

At1D132_RS26005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS26005
old locus tag: At1D132_49610
inference: COORDINATES: protein motif:HMM:NF012738.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar ABC transporter permease
translation: MSFTRWQIFDQPQWVGFDNYLHILASPAAAKVFLNTAWFSAMYVPGVIVLALVLAVLLNNGLRSSAFFRGAFFLPYITATVAVALVWKWIFSTKFGILNNVLLWLGFADPPAWLSDPLWSLPAVAIVAVWKDSGFFMLLLLAGLQTIDSVVYEAARMDGASRVRQFFEITIPLLSRSLFFVLVIAIVRSTQTFELTYSLTGGGPNGASTTLAFFIYENAFVSFQMGYASALAYLLCFAVGLLTLINFYVRRKWVHE
SIO_010081: At1D132_RS26005
subclass of: SO_0000673
so part of: At1D132_RS26005
location: 111463..112233
location: region:111463-112233:1
so has part: feature:111463-112233:1:exon

WP_121652074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111463-112233:1:exon

At1D132_RS26010
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS26010
old locus tag: At1D132_49620
so part of: sequence
location: 112226..113059
location: region:112226-113059:1
so has part: feature:112226-113059:1:exon
subclass of: SO_0000010

39477030
type: Gene
SIO_000068: ncbigene

position:112226:1
position: 112226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113059:1
position: 113059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112226-113059:1:exon

At1D132_RS26010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS26010
old locus tag: At1D132_49620
inference: COORDINATES: protein motif:HMM:NF012738.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbohydrate ABC transporter permease
translation: MNRNLTLVTLYGVLSIYALVTLSPFVWMLITSFKEPADLFRLPPTLVPTQLLTDAPFANYASVLTERDFATYFKNSLLVSGSAAIGQVMTCALAGYAFAKLPFPGRNILFAIVLATSFVPTEVTIIPEYLLMRQFGWINTFLPLIVPSFLVGSFGTFMLREYFGALPNEYAEAARMDGASGFRIFRDIYLPLAVPALISVFVVAFIHSWDELLRPILYLNSPELYTVPRGLISLVSEYDAQWTWFMAGSVISILPLVVIYFLAQRYVIQGFAGGGIK
SIO_010081: At1D132_RS26010
subclass of: SO_0000673
so part of: At1D132_RS26010
location: 112226..113059
location: region:112226-113059:1
so has part: feature:112226-113059:1:exon

WP_111808424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112226-113059:1:exon

At1D132_RS26015
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS26015
old locus tag: At1D132_49630
so part of: sequence
location: 113085..114482
location: region:113085-114482:1
so has part: feature:113085-114482:1:exon
subclass of: SO_0000010

39477044
type: Gene
SIO_000068: ncbigene

position:113085:1
position: 113085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114482:1
position: 114482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113085-114482:1:exon

At1D132_RS26015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS26015
old locus tag: At1D132_49630
inference: COORDINATES: protein motif:HMM:NF021507.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphodiester glycosidase family protein
translation: MSSIVKETVRLHSGVEANIAIIQIEAFRVEPFNETPPSDLVSKTEAGLAKGRLVANTYSVAHPAARSSAPESVSGLADSQIELWADRAVMMARSYESVGLATDELWRNRRGDRPGKFPVPIAHTDLMRLRSATLEKDEIFANANYFLFEPRELDTPFEAYGDPVAMVVSEEIVLYPPQVRRTSLVSYGSRLSIEKFGFDDVTLTLPGGVTVNSHPFGTFDARGVGNQPIALARYFGSLDGTTPAQDGVCEVAVVGRFAVAFARGGKMPIPRTGCVIRFPFEPDPLLIDALRSGHPVSYTLRQGVITEGIQTGPRLVKAGVVTPEMTVFDEEGMFVSIGDGDLVQPSPFNWKADWHETRAARLGAGLDVQGQLFFVAVEGQSTYASIGGALRGATLFDLAELLRERGAVEGMHLDGGGSTQLFRPFGGSILRPGNFCRGFEGVEADYDRPLPLGLRLKLQKSDEST
SIO_010081: At1D132_RS26015
subclass of: SO_0000673
so part of: At1D132_RS26015
location: 113085..114482
location: region:113085-114482:1
so has part: feature:113085-114482:1:exon

WP_111808422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113085-114482:1:exon

At1D132_RS26020
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS26020
old locus tag: At1D132_49640
so part of: sequence
location: 114479..115603
location: region:114479-115603:1
so has part: feature:114479-115603:1:exon
subclass of: SO_0000010

39477022
type: Gene
SIO_000068: ncbigene

position:114479:1
position: 114479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115603:1
position: 115603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114479-115603:1:exon

At1D132_RS26020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS26020
old locus tag: At1D132_49640
inference: COORDINATES: protein motif:HMM:NF012692.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ROK family transcriptional regulator
translation: MTFHKELNELQRQTLESLIISEHAPSRFELSNLFGVSPQTMTRAVKGLVEHGIVDEQPEATGNRGQPSRRLIFRQESLLVVGLVLANHEVVLTVEDLVGKRLFKLEQLGDFREPGPTLEAAAGMVEKAFESFGGGSRIVGIGIAAQGFFVERGRKIVSIGNPVAWAAVDLKAYFEDRFALPVTIHNDAKAVAVGTIREGVARRHSHYFCIYIAGGIGGALVHDGRLYEGISANAGEVGYFVPRDEVRPTVPNFLATANLRNLSEWVETDNIEGPILDWCRNAGAALSPIAQMCVRIYDVDTIFVCSPLPKIVLEAICQAVQVEPIGRNILEEADAKRLLKWPTVVATNDASLNRGACALAVYQFLRAVAPGSMT
SIO_010081: At1D132_RS26020
subclass of: SO_0000673
so part of: At1D132_RS26020
location: 114479..115603
location: region:114479-115603:1
so has part: feature:114479-115603:1:exon

WP_121652075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114479-115603:1:exon

At1D132_RS26025
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
gene: ugpC
locus tag: At1D132_RS26025
so part of: sequence
location: 115647..116741
location: region:115647-116741:1
so has part: feature:115647-116741:1:exon
subclass of: SO_0000010

39477057
type: Gene
SIO_000068: ncbigene

position:115647:1
position: 115647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116741:1
position: 116741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115647-116741:1:exon

At1D132_RS26025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
gene: ugpC
locus tag: At1D132_RS26025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007816976.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
translation: MAPISLRGVRKSYGEFPVIHGVDLEIASGEFIVILGPSGCGKSTLLRMVAGLEDISGGEIAIDERVVNNLEPRERGCAMVFQNYALYPHMSVAANIGYALKVAGVPKEERQRRVENTAKIVGLSTYLDRKPAALSGGQRQRVAMARAIIREPKVFLFDEPLSNLDAKLRVVMRAEIRRLHKQLFATSIFVTHDQHEAMTLADRIIVMNGGQVEQVGTPQEIYHSPATRFVAAFVGTPSMNLLEGMISDDGAFVDGSGNRVDLGSASPQAAPGSQLVLGVRAEAVRLVEPGAKGALVGTADFVEELGATRVVHAVIGGTAFAVVTNEPVQVEPGARLGVMFDTKATHFYSAETGAKVLLKQELAV
SIO_010081: At1D132_RS26025
subclass of: SO_0000673
so part of: At1D132_RS26025
location: 115647..116741
location: region:115647-116741:1
so has part: feature:115647-116741:1:exon

WP_111808418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115647-116741:1:exon

At1D132_RS26030
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS26030
old locus tag: At1D132_49670
so part of: sequence
location: 117013..118044
location: region:117013-118044:1
so has part: feature:117013-118044:1:exon
subclass of: SO_0000010

39476990
type: Gene
SIO_000068: ncbigene

position:117013:1
position: 117013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118044:1
position: 118044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117013-118044:1:exon

At1D132_RS26030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS26030
old locus tag: At1D132_49670
EC number: 3.5.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007761508.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SIS domain-containing protein
translation: MLTNMTHMRKEIDEAPEAAARLLEGSASEIAAAGLALREKDPAFLITIARGSSDHAATFIKYAVELTAGRPVASLGPSVASVYGANLKLDGGAALAISQSGKSPDIVAMADAATKAGALTIALTNTLPSPIATASTHAVNLNAGPELAVAATKSFLNSIVAGLAVLSEWTGDEALKGAVRALPEHFEKAVKLDWSELAHQLGDAKSLYMLGRGPALAIASEAALKFKETSNKHAEAYSSAEVLHGPVALVEGRFPIVTFAARDAAEASVVKIIDSLAAKGALAFATSDKANEARRLPFVATGHPITDALTLILPFYGFVEDWSRSKGFNPDAPLALKKVTETV
SIO_010081: At1D132_RS26030
subclass of: SO_0000673
so part of: At1D132_RS26030
location: 117013..118044
location: region:117013-118044:1
so has part: feature:117013-118044:1:exon

WP_111808416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117013-118044:1:exon

At1D132_RS26035
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
gene: nagA
locus tag: At1D132_RS26035
old locus tag: At1D132_49680
pseudo: true
so part of: sequence
location: 118041..119213
location: region:118041-119213:1
so has part: feature:118041-119213:1:exon
subclass of: SO_0000010

39476945
type: Gene
SIO_000068: ncbigene

position:118041:1
position: 118041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119213:1
position: 119213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118041-119213:1:exon

At1D132_RS26035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
gene: nagA
locus tag: At1D132_RS26035
old locus tag: At1D132_49680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007761500.1
GO function: GO:0008448 - N-acetylglucosamine-6-phosphate deacetylase activity [Evidence IEA]
GO process: GO:0006040 - amino sugar metabolic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: N-acetylglucosamine-6-phosphate deacetylase
SIO_010081: At1D132_RS26035
subclass of: SO_0000673
so part of: At1D132_RS26035
location: 118041..119213
location: region:118041-119213:1
so has part: feature:118041-119213:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:118041-119213:1:exon

At1D132_RS26040
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS26040
old locus tag: At1D132_49690
so part of: sequence
location: 119318..120961
location: region:119318-120961:1
so has part: feature:119318-120961:1:exon
subclass of: SO_0000010

39476985
type: Gene
SIO_000068: ncbigene

position:119318:1
position: 119318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120961:1
position: 120961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119318-120961:1:exon

At1D132_RS26040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS26040
old locus tag: At1D132_49690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003518490.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Na/Pi cotransporter family protein
translation: MQSTIIMINLFGAVALLLFGLAQVKDGVSRAFGAKLRTGLATGTRSGTRSFISGLTATIALQSSTATALMTASFVERELIKPRMAQIVLLGANVGTAVTAWIVSTGIEWLSPLLVLAGIVLYRSGSTSRQGGGTALIGIGLMLLSLHLLSSATEPMRQSPALAAFISLLDNAWPVALAFSAGIAFISSSSLAAVVLILSLASTGILSAGLIIVLVLGANLGGAIPPVVASLSGPPLARRVTLGNLIARAIGCAILLPLTGYAADVLSIFPLSPAKLPVDAHLGFNLILAALAWPFSRLLSEWMQRLVPDEGQPDNAPRYLDTSELSTPVVALANATRETLGVGDLVERMLTRACNAFENNDLTHLKDVSLLERRVDSLEQEVKIYLSSLGREELVEEDSRRSAVILDYAINLEHIGDIIEKSLVPQVTKKTSQGLKFSEEGHEELKKLFDLTIDNLRIAQTILVTRDFNLAKQMMELKVEVRRLERWSSERHLERLRDGRADSLQTSSLHLDMLRDLKRINAHIISVAYPIMDEHGLLTESRVRDAG
SIO_010081: At1D132_RS26040
subclass of: SO_0000673
so part of: At1D132_RS26040
location: 119318..120961
location: region:119318-120961:1
so has part: feature:119318-120961:1:exon

WP_111808414.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119318-120961:1:exon

At1D132_RS26045
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS26045
pseudo: true
so part of: sequence
location: complement(121417..>121711)
location: region:121417-121711:-1
so has part: feature:121417-121711:-1:exon
subclass of: SO_0000010

39477051
type: Gene
SIO_000068: ncbigene

position:121417:-1
position: 121417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121711:-1
position: 121711
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121417-121711:-1:exon

At1D132_RS26045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS26045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011654740.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: thermonuclease family protein
SIO_010081: At1D132_RS26045
subclass of: SO_0000673
so part of: At1D132_RS26045
location: complement(121417..>121711)
location: region:121417-121711:-1
so has part: feature:121417-121711:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:121417-121711:-1:exon

At1D132_RS26050
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS26050
so part of: sequence
location: complement(121978..122238)
location: region:121978-122238:-1
so has part: feature:121978-122238:-1:exon
subclass of: SO_0000010

39476946
type: Gene
SIO_000068: ncbigene

position:121978:-1
position: 121978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122238:-1
position: 122238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121978-122238:-1:exon

At1D132_RS26050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS26050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003594540.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WGR domain-containing protein
translation: MILQPYRLYIERTDEARNMARFYAMTIEPNLFGEICLTRRWGRIGAQGQTKTQHFAREQDAVTTFLDLLRRKRSRGYRVTPSTARH
SIO_010081: At1D132_RS26050
subclass of: SO_0000673
so part of: At1D132_RS26050
location: complement(121978..122238)
location: region:121978-122238:-1
so has part: feature:121978-122238:-1:exon

WP_111808516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121978-122238:-1:exon

At1D132_RS26055
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
gene: traG
locus tag: At1D132_RS26055
old locus tag: At1D132_49720
so part of: sequence
location: complement(122663..124606)
location: region:122663-124606:-1
so has part: feature:122663-124606:-1:exon
subclass of: SO_0000010

39476938
type: Gene
SIO_000068: ncbigene

position:122663:-1
position: 122663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124606:-1
position: 124606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122663-124606:-1:exon

At1D132_RS26055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
gene: traG
locus tag: At1D132_RS26055
old locus tag: At1D132_49720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010974894.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ti-type conjugative transfer system protein TraG
translation: MTANRLLLAILPAVIMLAAMILTSGFEHRLAALGTSAQAKLMLGRVGLALPYVTAAAIGVMALFAVNGSTNIKLAGGSVLAGNAVTVVIALVREIVRLAGIAKKVPAEQSVLTYSDPATIVGAAAAIFSGIFGLHVALKGNAAFAASGPRRIGGKRAVHGEADWMKLTEAAKLFPEHGGIVIGERYRVDRDIVAAMPFRADNKQSWGAGGKSPLLCFDGSFGSSHGIVFAGSGGFKTTSVTIPTALKWGGSLVVLDPSSEVAPMVIEHRRKAGRKVIVLDPTASGIGFNALDWIGRHGNTKEEDIVAVATWIMTDNARTASARDDFFRASAMQLLTALIADVCLSGHTDAKDQTLRRVRANLSEPEPQLRARLTKIYEGSGSDFVKENVAVFVNMTPETFSGVYANAVKETHWLSYPTYAGLVSGESFSTGDLADGETDTFIALDLKVLEAHPGLARVVIGSLLNAIYNRNGNVKDRTLFLLDEVARLGYLRILETARDAGRKYGITLTMIFQSLGQMREAYGGRDATSKWFESASWISFSAINDPDTADYISKRCGDTTVEVDQTNRSSGMKGSSRSRSKQLNRRPLILPHEVLRMRADEQIVFTAGNAPLRCGRAVWFRREDMKACVGENRFHKNSSGTHESVVR
SIO_010081: At1D132_RS26055
subclass of: SO_0000673
so part of: At1D132_RS26055
location: complement(122663..124606)
location: region:122663-124606:-1
so has part: feature:122663-124606:-1:exon

WP_121652076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122663-124606:-1:exon

At1D132_RS26060
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
gene: traD
locus tag: At1D132_RS26060
old locus tag: At1D132_49730
so part of: sequence
location: complement(124593..124808)
location: region:124593-124808:-1
so has part: feature:124593-124808:-1:exon
subclass of: SO_0000010

39476955
type: Gene
SIO_000068: ncbigene

position:124593:-1
position: 124593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124808:-1
position: 124808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124593-124808:-1:exon

At1D132_RS26060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
gene: traD
locus tag: At1D132_RS26060
old locus tag: At1D132_49730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020046837.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV conjugative transfer system coupling protein TraD
translation: MAKSTTTEARKKDTREKIELGGLIVKAGLRYEKRSLLLGLLIDASRRIKGDETEIARLAAIGAEAFGNDGE
SIO_010081: At1D132_RS26060
subclass of: SO_0000673
so part of: At1D132_RS26060
location: complement(124593..124808)
location: region:124593-124808:-1
so has part: feature:124593-124808:-1:exon

WP_162688291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124593-124808:-1:exon

At1D132_RS26065
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS26065
old locus tag: At1D132_49740
so part of: sequence
location: complement(124813..125109)
location: region:124813-125109:-1
so has part: feature:124813-125109:-1:exon
subclass of: SO_0000010

39477037
type: Gene
SIO_000068: ncbigene

position:124813:-1
position: 124813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125109:-1
position: 125109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124813-125109:-1:exon

At1D132_RS26065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS26065
old locus tag: At1D132_49740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003523837.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraC family protein
translation: MKKPSSRIREEIARLQDQLKKAETREAERIGRIALKAGLGEMEIDEAELQAAFEDVAKRFRGGKGAATGKKDGGDGRAGSGSSTAQSPGADAGGPGEG
SIO_010081: At1D132_RS26065
subclass of: SO_0000673
so part of: At1D132_RS26065
location: complement(124813..125109)
location: region:124813-125109:-1
so has part: feature:124813-125109:-1:exon

WP_111808408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124813-125109:-1:exon

At1D132_RS26070
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
gene: traA
locus tag: At1D132_RS26070
old locus tag: At1D132_49750
so part of: sequence
location: 125361..128663
location: region:125361-128663:1
so has part: feature:125361-128663:1:exon
subclass of: SO_0000010

39476942
type: Gene
SIO_000068: ncbigene

position:125361:1
position: 125361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128663:1
position: 128663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125361-128663:1:exon

At1D132_RS26070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
gene: traA
locus tag: At1D132_RS26070
old locus tag: At1D132_49750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003523838.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ti-type conjugative transfer relaxase TraA
translation: MAIAHFSASIVSRGSGRSVVLSAAYRHCAKMEYERETRTIDYTRKQGLLHEEFVLPADAPKWGRSLIADRSVSGASEAFWNSVETFEKRADAQLARDLTIALPLELSAEQNIALVQDFVEKHILAKGMVADWVYHDNPGNPHIHLMTTLRPLSEDGFGSKKVAVIGEDGQPVRTKSGKILYELWAGSTEDFNVLRDGWFERLNHHLALGGIDLRIDGRSYQKQGIKLEPTIHLGVGTKAIERKAESSGVRPELERIELNDARRAENTRRILKSPAIVLDLITREKSVFDERDVAKVLHRYVDDPAVFQQLMLRIILNPEVLRLQRDTIDFATGKRVPACYSTRAMIRLEATMARQATWLSEREGRAVSGTILEATFQRHERLSEEQRTAIERIAGPARIAAVVGRAGAGKTTMMKAACEAWEQAGYRVVGGALAGKAAEGLEKEAGIESRTLASWELRWNRGRDVLDDKTIFVMDEAGMVASKQMAGFVDAVVRAGAKIVLVGDPEQLQPIEAGAAFRAIVDRVGYAELETIYRQRENWMRKASLDLARGNVERALVAYQGQGRVLGSRLKSEAVENLIGDWNRDYDQTKATLILAHLRRDVRMLNVMAREKLIERGIVGEGHLFRTADGERRFDAGDQIVFLKNEGSLGVKNGMIGRVIEAAANRIVATVGEGEQRRQLIVEQRFYNNLDHGYATTIHKSQGATVDRVKVLASLSLDRHLTYVAMTRHREDLQLYYGTRSFSFNGGLAKVLSRKHAKETTLDYERGQLYREALRFSENRGLHIVQVARTLVRDRLDWTLRQKAKLVELGQRLAAFAARLCFNQIPNTPTMKEAAPMVAGTKTFAGSVADSVGDKLGADPALKRQWEEVYARFGYVFADPETAFRSMNFDAVLAEKEMAKQVLRKIEVEPASIGPLKGKTGILATRSDREARRAAEVNVPALKRDLEQYLRMRETVTQRLQADEQALRQRASIDIPALSPAAHVVLERVRDAIDRNDLPAAMAYALSNRETKLEIDGFNKAVTQRFGERTLLSNAAREPSGKIFEELSKGMKPEQKQQLKQAWPVIRTAQQLAAHERIGQSLRQAEEQRLTQRQTPVQKL
SIO_010081: At1D132_RS26070
subclass of: SO_0000673
so part of: At1D132_RS26070
location: 125361..128663
location: region:125361-128663:1
so has part: feature:125361-128663:1:exon

WP_121652077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125361-128663:1:exon

At1D132_RS26075
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
gene: traF
locus tag: At1D132_RS26075
old locus tag: At1D132_49760
so part of: sequence
location: 128660..129190
location: region:128660-129190:1
so has part: feature:128660-129190:1:exon
subclass of: SO_0000010

39476950
type: Gene
SIO_000068: ncbigene

position:128660:1
position: 128660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129190:1
position: 129190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128660-129190:1:exon

At1D132_RS26075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
gene: traF
locus tag: At1D132_RS26075
old locus tag: At1D132_49760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003508820.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0008233 - peptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugative transfer signal peptidase TraF
translation: MRAPKVPLFLTGAIVAVFALAATAFTGGYRLNLTPSEPLGLWRIEELQRPVAVGDLVFVCPPTTAVFEEAWRRGYLRRGLCPGGIAPLIKSVAALPGQRVDITDHVLIDGRLVPASSVWRTDGEGRAINPDPGGVVPPHHLFLHSPFASSYDSRYFGSVPDSGLLGLARQVLTFDP
SIO_010081: At1D132_RS26075
subclass of: SO_0000673
so part of: At1D132_RS26075
location: 128660..129190
location: region:128660-129190:1
so has part: feature:128660-129190:1:exon

WP_111808404.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128660-129190:1:exon

At1D132_RS26080
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS26080
old locus tag: At1D132_49770
so part of: sequence
location: 129207..130406
location: region:129207-130406:1
so has part: feature:129207-130406:1:exon
subclass of: SO_0000010

39477042
type: Gene
SIO_000068: ncbigene

position:129207:1
position: 129207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130406:1
position: 130406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129207-130406:1:exon

At1D132_RS26080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS26080
old locus tag: At1D132_49770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006315304.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraB
translation: MTDRWKSILLIIASIAGGRVAWSGEVLLLPVAMIFPLLWAIAPSRPIAALVAAGYFLAASRGLPQGVANFYRADLWPGLLLWVVASASFVIVHAVFWTKPRGENASERKGTDSARALRNLLAMALTGLPPFGITGWAHPLTAAGVLFPAWGWSGLSAMATGLLIMTTRLWPAAAIILGGFWLWSAATWTEPKLPDAWRGVDLQVGQNLGRDGSLLHHRDLIATVRRTIAEHSDQHLVVLPESTLGFWTPTVARVWRDGLRGSGLTVIAGAAVVDPKGYDNVMVVISADAANILYRERMPVPGSMWQPWLRWTSQGGGARADFFGNPVVDVDGSRITPLICYEQLILWPVLQSMLHAPEVIVAVGNGWWTENTSIVAIQEASVAAWARLFGLPVVMAFNI
SIO_010081: At1D132_RS26080
subclass of: SO_0000673
so part of: At1D132_RS26080
location: 129207..130406
location: region:129207-130406:1
so has part: feature:129207-130406:1:exon

WP_121652078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129207-130406:1:exon

At1D132_RS26085
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS26085
old locus tag: At1D132_49780
so part of: sequence
location: 130419..131045
location: region:130419-131045:1
so has part: feature:130419-131045:1:exon
subclass of: SO_0000010

39476968
type: Gene
SIO_000068: ncbigene

position:130419:1
position: 130419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131045:1
position: 131045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130419-131045:1:exon

At1D132_RS26085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS26085
old locus tag: At1D132_49780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006315305.1
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraH family protein
translation: MLDAVLIHQCADPSLKPTIVEQFIAKAGSQDPFAITVRSGNRVVLVPKPTTAVEALALIRDNLGRNTVRVGITQYPAGLRIVEAGRLKPETVEPCENIRTGTALFAKVFRIVSKWYGNPTAKEVLPQVMDDAVIAWQTGYFEGVPVFRAEDPGQEKITWPATADSEESENGADPNKDNVAAATATETGVSDPNKAGIRIDLSGIGATP
SIO_010081: At1D132_RS26085
subclass of: SO_0000673
so part of: At1D132_RS26085
location: 130419..131045
location: region:130419-131045:1
so has part: feature:130419-131045:1:exon

WP_121652079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130419-131045:1:exon

At1D132_RS26090
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS26090
old locus tag: At1D132_49790
so part of: sequence
location: 131362..131670
location: region:131362-131670:1
so has part: feature:131362-131670:1:exon
subclass of: SO_0000010

39477015
type: Gene
SIO_000068: ncbigene

position:131362:1
position: 131362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131670:1
position: 131670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131362-131670:1:exon

At1D132_RS26090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS26090
old locus tag: At1D132_49790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003523843.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional repressor TraM
translation: MDLKDSVVSGTSELRPVIGLTRGLSSADIETLTINAIRLHRKFVEKADQFFQALPEDYRTGKSVGGEQHLEYIEAMIEMHAQMSAVNTLVGLLGYIPKVSVN
SIO_010081: At1D132_RS26090
subclass of: SO_0000673
so part of: At1D132_RS26090
location: 131362..131670
location: region:131362-131670:1
so has part: feature:131362-131670:1:exon

WP_111808398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131362-131670:1:exon

At1D132_RS26095
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
gene: traR
locus tag: At1D132_RS26095
old locus tag: At1D132_49800
so part of: sequence
location: complement(131681..132385)
location: region:131681-132385:-1
so has part: feature:131681-132385:-1:exon
subclass of: SO_0000010

39477006
type: Gene
SIO_000068: ncbigene

position:131681:-1
position: 131681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132385:-1
position: 132385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131681-132385:-1:exon

At1D132_RS26095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
gene: traR
locus tag: At1D132_RS26095
old locus tag: At1D132_49800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012654946.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator TraR
translation: MQHWLDKLTDLAALRGDENVLKDALTHLAQQAGFSAYAYLYIRPGHTIASSNYDPKWRSIYFKRKFEAVDPIVKRAKSVKRAFTWSGDEERRRVSKGECAFFDQAADFGIRSGITIPIRAANGSTSMFTLASHKPIIDLQRDIDPVAAAAAVGQLHTRMSLLPLTPTAQHPAWLDPKEAAYLNWISVGKTMEEAADLEGVKYNSVKSKLEEARKRFQIHTMPHLVALAIRAGLI
SIO_010081: At1D132_RS26095
subclass of: SO_0000673
so part of: At1D132_RS26095
location: complement(131681..132385)
location: region:131681-132385:-1
so has part: feature:131681-132385:-1:exon

WP_111808396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131681-132385:-1:exon

At1D132_RS26105
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS26105
old locus tag: At1D132_49810
so part of: sequence
location: complement(133043..133993)
location: region:133043-133993:-1
so has part: feature:133043-133993:-1:exon
subclass of: SO_0000010

39477024
type: Gene
SIO_000068: ncbigene

position:133043:-1
position: 133043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133993:-1
position: 133993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133043-133993:-1:exon

At1D132_RS26105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS26105
old locus tag: At1D132_49810
inference: COORDINATES: protein motif:HMM:NF023197.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3313 domain-containing protein
translation: MSGRRRHRSTTDSAVFIGWILVSTRHARFFFLLATPLLGGCTSVPLKEGGTLISYSRLSSEKGTLSKRRTYVDSAALSQLRTATIIPASFTLEAAARVESLDDRRMVANMLGRALCISLSDRFHMVPYGQVADFSVRAAVTHLVPTDKVAAGASAALTLGTGFALPVAAPRLPIGLGGIAVEAEAVGHSGNQLAATVWSRGANSISNTPRVSQVGDAYALAATFGTEFSKLLVDGKDRTRPDLSLPSAHRVQSWLGGKPKYAACDTFGRSPGMVGLIVSRFGAPPKWTDNKAQPGTSLWSPRTGSNFRQLLRPGGD
SIO_010081: At1D132_RS26105
subclass of: SO_0000673
so part of: At1D132_RS26105
location: complement(133043..133993)
location: region:133043-133993:-1
so has part: feature:133043-133993:-1:exon

WP_121652080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133043-133993:-1:exon

At1D132_RS26110
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS26110
old locus tag: At1D132_49820
so part of: sequence
location: complement(134047..135339)
location: region:134047-135339:-1
so has part: feature:134047-135339:-1:exon
subclass of: SO_0000010

39476960
type: Gene
SIO_000068: ncbigene

position:134047:-1
position: 134047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135339:-1
position: 135339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134047-135339:-1:exon

At1D132_RS26110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS26110
old locus tag: At1D132_49820
inference: COORDINATES: protein motif:HMM:NF013646.2
GO function: GO:0071949 - FAD binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent monooxygenase
translation: MSKADGFADNRPKILIVGSSIAGPTAAFWLVRAGFNVTIVEQASELRRGGNGVDVRSEALAVIERMGLTSAIRAKALSIKGLRFVDHRDRERARMPLEAMERMVGSEDLEIKRGDLAELLFDATKNDVNYIFGETVKTIAQDERGVDVTFTNGSPRRFDLVIGADGLHSGVRRAVFGAEDEFLKFKQHYFAFVNVDLPMGEHGWVTFYNEPGKSAAIFRAEPGLGQINFMFHSDRPLSYNYRDLAKQRALLREAFSSLGWHVPAMLEETDSAVDFYFDALAQVQMPSWSSGRVVLVGDAAYCASPASGAGALLALTGAYRLAGELATYGITATALERYEVAQRPLVAQKQEQLFTWLSTPRTRFGIVVRNWLLSPPLNILISKLQGSDGQASIHEYRFPNEASLQFEMPRTARASATWSPKTAGSSGGSA
SIO_010081: At1D132_RS26110
subclass of: SO_0000673
so part of: At1D132_RS26110
location: complement(134047..135339)
location: region:134047-135339:-1
so has part: feature:134047-135339:-1:exon

WP_121652081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134047-135339:-1:exon

At1D132_RS26115
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS26115
old locus tag: At1D132_49830
so part of: sequence
location: 135423..136007
location: region:135423-136007:1
so has part: feature:135423-136007:1:exon
subclass of: SO_0000010

39477056
type: Gene
SIO_000068: ncbigene

position:135423:1
position: 135423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136007:1
position: 136007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135423-136007:1:exon

At1D132_RS26115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS26115
old locus tag: At1D132_49830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012222760.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MDTKAQRRRGPELQEAILQAVWDELQSKGYGGLTLDSVAGRAGTSRPVLHRRWQSRSELVMAALVRYVALNPISITDQGSVRSEMIELLKRLSDRAQPHFIRILVDMREDLFKDNLSFADVPGRLGEHGLVAEILRRGANRGEIDLARITTRVASLPIELARHDMLMTLKPLSDKSIEEIIDEVFLPLVLQTTK
SIO_010081: At1D132_RS26115
subclass of: SO_0000673
so part of: At1D132_RS26115
location: 135423..136007
location: region:135423-136007:1
so has part: feature:135423-136007:1:exon

WP_111808515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135423-136007:1:exon

At1D132_RS27710
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS27710
pseudo: true
so part of: sequence
location: complement(<136259..>136751)
location: region:136259-136751:-1
so has part: feature:136259-136751:-1:exon
subclass of: SO_0000010

71770911
type: Gene
SIO_000068: ncbigene

position:136259:-1
position: 136259
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:136751:-1
position: 136751
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136259-136751:-1:exon

At1D132_RS27710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS27710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011389707.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: HlyD family efflux transporter periplasmic adaptor subunit
SIO_010081: At1D132_RS27710
subclass of: SO_0000673
so part of: At1D132_RS27710
location: complement(<136259..>136751)
location: region:136259-136751:-1
so has part: feature:136259-136751:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:136259-136751:-1:exon

At1D132_RS26125
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
gene: trbI
locus tag: At1D132_RS26125
old locus tag: At1D132_49840
so part of: sequence
location: complement(136944..138254)
location: region:136944-138254:-1
so has part: feature:136944-138254:-1:exon
subclass of: SO_0000010

39476978
type: Gene
SIO_000068: ncbigene

position:136944:-1
position: 136944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138254:-1
position: 138254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136944-138254:-1:exon

At1D132_RS26125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
gene: trbI
locus tag: At1D132_RS26125
old locus tag: At1D132_49840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003523583.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IncP-type conjugal transfer protein TrbI
translation: MVQSLKLGGAANSQANSGIKRVNRLPVIVVIALLVIFLGIIFFGLASRGLYFGKDNGPDTSSGNPASTYADQLKRGVTDGIIGEPQPQTTFQPPPVETKRAEEKAANPFTQQPEQRQEQRNGSELEPEEVWRARLAREQQEQVLREQQRQRMARIQARDSAYDAPLAIDRGKLEVGPEKNESAGARTTTAAANGNASDLYAAALRAGLGGQNVDPNGQNSKEDFFNADLKDLGYLPNRVVPQQSLYELKRGSVIPATLMTGINSDLPGRITAQVSQNVYDSATGYRLLIPQGTKLFGRYDSKVSFGQSRVLVVWSDIIFPNGSTLQIGGMAGTDAEGYGGFNDKANNHYLKTFGSAVMIALIGTGIDMAVPQSSTLAIQDTASDAARRNFSETFGRVADRTIQRNMDVQPTLEIRPGYKFNVLIDQDIVFPKSYDG
SIO_010081: At1D132_RS26125
subclass of: SO_0000673
so part of: At1D132_RS26125
location: complement(136944..138254)
location: region:136944-138254:-1
so has part: feature:136944-138254:-1:exon

WP_121652082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136944-138254:-1:exon

At1D132_RS26130
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
gene: trbH
locus tag: At1D132_RS26130
old locus tag: At1D132_49850
so part of: sequence
location: complement(138266..138745)
location: region:138266-138745:-1
so has part: feature:138266-138745:-1:exon
subclass of: SO_0000010

39476952
type: Gene
SIO_000068: ncbigene

position:138266:-1
position: 138266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138745:-1
position: 138745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138266-138745:-1:exon

At1D132_RS26130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
gene: trbH
locus tag: At1D132_RS26130
old locus tag: At1D132_49850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006312342.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbH
translation: MLDLLRHNQNRLGNIRCFARAGALAILLSGCQSVETDGLASSAAPPEISGPAAGAIAGDMISRLAEQIGQGKATVALKQDGSPFGQALEAALKGWGYAVVTDQKMDGGGSIVPLAYVIVPYEGQVLARLSTSSVELGRAYTVTTSGATPASALSLMRRG
SIO_010081: At1D132_RS26130
subclass of: SO_0000673
so part of: At1D132_RS26130
location: complement(138266..138745)
location: region:138266-138745:-1
so has part: feature:138266-138745:-1:exon

WP_111808390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138266-138745:-1:exon

At1D132_RS26135
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
gene: trbG
locus tag: At1D132_RS26135
old locus tag: At1D132_49860
so part of: sequence
location: complement(138745..139596)
location: region:138745-139596:-1
so has part: feature:138745-139596:-1:exon
subclass of: SO_0000010

39477040
type: Gene
SIO_000068: ncbigene

position:139596:-1
position: 139596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138745-139596:-1:exon

At1D132_RS26135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
gene: trbG
locus tag: At1D132_RS26135
old locus tag: At1D132_49860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012654963.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbG
translation: MNRFHELSRVTMGAGIIAIAVAASCALPSASLGADGVTANEAKGMGISTHWRGSRGLVTKGADGKVIFLYGEVQPSVVCSPLQVCDIELQGGEVVRDVLVGDTVRWKVEPATSGAAGGQAIHLIVKPSEPGLVTSMVVTTSRRTYHIQLKSHATQYMARVGFEYPEDVLAKLADVNARLEASTIPGPGVPAEQLSFAYSVSGSAGWRPTRVYSDGQKTYIQFPRSISGQDAPVLFVVSGGQNRIVNYRMKSNMMVVDYNIDRAVLVSGVGWKQQKVTISRGGR
SIO_010081: At1D132_RS26135
subclass of: SO_0000673
so part of: At1D132_RS26135
location: complement(138745..139596)
location: region:138745-139596:-1
so has part: feature:138745-139596:-1:exon

WP_111808513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138745-139596:-1:exon

At1D132_RS26140
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS26140
old locus tag: At1D132_49870
so part of: sequence
location: complement(139614..140276)
location: region:139614-140276:-1
so has part: feature:139614-140276:-1:exon
subclass of: SO_0000010

39476966
type: Gene
SIO_000068: ncbigene

position:139614:-1
position: 139614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140276:-1
position: 140276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139614-140276:-1:exon

At1D132_RS26140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS26140
old locus tag: At1D132_49870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003523580.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbF
translation: MAGQNIPDNPYIAARNEWNERYGSYVKAAAAWRVVGIAGMTMAVIGFSYALYQSTQVKLIPYIVEVDKLGTAVNAGFPQQIEYADPRVVRATLGSFVSNFRSVTPDAVVQKQYIDRTYGLLRTSDPATEKVNTWFRSNSPFEKAKTATVAIEVNNIVALSNQSYQIDWTEFERDRRGKETATRRFRAIATVTLTPPQDEGVIRLNPIGLYLRDFDWTAQL
SIO_010081: At1D132_RS26140
subclass of: SO_0000673
so part of: At1D132_RS26140
location: complement(139614..140276)
location: region:139614-140276:-1
so has part: feature:139614-140276:-1:exon

WP_111808388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139614-140276:-1:exon

At1D132_RS26145
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
gene: trbL
locus tag: At1D132_RS26145
old locus tag: At1D132_49880
so part of: sequence
location: complement(140292..141482)
location: region:140292-141482:-1
so has part: feature:140292-141482:-1:exon
subclass of: SO_0000010

39476962
type: Gene
SIO_000068: ncbigene

position:140292:-1
position: 140292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141482:-1
position: 141482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140292-141482:-1:exon

At1D132_RS26145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
gene: trbL
locus tag: At1D132_RS26145
old locus tag: At1D132_49880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006312337.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbL
translation: MVAVASSRTLDRVFIAIALVLMATTPALAQQGQVLTTLENSVVIAAKGWETTVMNAARSLFWILAGIEVGIAAVWLAINAASLDSWFAELVKRILFIGLFAFILDRGPEFAKAVVDSLYQIGAGGGSASPANIFDAGIRVATKMSEQAKFGIWEDNALAIAAVFAMVVVVVSFSLVAAIFVAVMVEMYVGLLAGMIMLGLGGSSHTKDFAIKYLVYAFSVGMKLMALVMIAKIGSDILLGLAEAPTATSEQFITTLAIAGISVVVFVIAMYVPPILQGVVQGASLGGGMEAIRHGGQAASAALGAGFLTIGAANRGFGTASAARAGGSSLASAALRGMQAGVGGAAGAVGSAAKEKAIGSPGAYAGSMLGLANSKLDQRPGRPGSSPPPPPINDMR
SIO_010081: At1D132_RS26145
subclass of: SO_0000673
so part of: At1D132_RS26145
location: complement(140292..141482)
location: region:140292-141482:-1
so has part: feature:140292-141482:-1:exon

WP_121652083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140292-141482:-1:exon

At1D132_RS26150
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
gene: trbK
locus tag: At1D132_RS26150
old locus tag: At1D132_49890
so part of: sequence
location: complement(141476..141709)
location: region:141476-141709:-1
so has part: feature:141476-141709:-1:exon
subclass of: SO_0000010

39476941
type: Gene
SIO_000068: ncbigene

position:141476:-1
position: 141476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141709:-1
position: 141709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141476-141709:-1:exon

At1D132_RS26150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
gene: trbK
locus tag: At1D132_RS26150
old locus tag: At1D132_49890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012649097.1
GO process: GO:0009292 - horizontal gene transfer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: entry exclusion protein TrbK
translation: MSPRLFLFIALVAIGSAAGASVITSIIVQPQATPVSGSGTAATNSSSDEEQRRHREEFFGGNSDRDIRGGQEMKPRW
SIO_010081: At1D132_RS26150
subclass of: SO_0000673
so part of: At1D132_RS26150
location: complement(141476..141709)
location: region:141476-141709:-1
so has part: feature:141476-141709:-1:exon

WP_111808384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141476-141709:-1:exon

At1D132_RS26155
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
gene: trbJ
locus tag: At1D132_RS26155
old locus tag: At1D132_49900
so part of: sequence
location: complement(141706..142515)
location: region:141706-142515:-1
so has part: feature:141706-142515:-1:exon
subclass of: SO_0000010

39476974
type: Gene
SIO_000068: ncbigene

position:141706:-1
position: 141706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142515:-1
position: 142515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141706-142515:-1:exon

At1D132_RS26155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
gene: trbJ
locus tag: At1D132_RS26155
old locus tag: At1D132_49900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003523577.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbJ
translation: MPTRSSQPNRILHAALGAAITVSSVLPLPARAGGVTGQATEWTQLANNAELVSLVGKSAEQVNNQITQISQLAEQIQNQLNIYKNMLQNTAQLPDHVWGQVESDLKNLQNVVNQGQGVAFSMGNVDDVLKQRFQSFADMKSNLPDGASFSTTYQNWSDTNRDTIAGTLKAANLTAEQFSSEESTMSQLRSMSETADGQMKALQVGHEIAAQQVAQTQKLRGLVSQQMMMMGTWYQSEQAQKDLAQARREQFFSGTERDIRGGQTMEPRW
SIO_010081: At1D132_RS26155
subclass of: SO_0000673
so part of: At1D132_RS26155
location: complement(141706..142515)
location: region:141706-142515:-1
so has part: feature:141706-142515:-1:exon

WP_111808382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141706-142515:-1:exon

At1D132_RS26160
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS26160
old locus tag: At1D132_49910
so part of: sequence
location: complement(142487..144949)
location: region:142487-144949:-1
so has part: feature:142487-144949:-1:exon
subclass of: SO_0000010

39476947
type: Gene
SIO_000068: ncbigene

position:142487:-1
position: 142487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144949:-1
position: 144949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142487-144949:-1:exon

At1D132_RS26160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS26160
old locus tag: At1D132_49910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012649099.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbE
translation: MVALKSFRHSGPSFADLVPYAGLVDNGVLLLKDGSLMAGWYFAGPDSESSTDAERNEVSRQINAILSRLGSGWMIQVEAVRVPAGDYPTEEVSHFPDPVTRAIDAERRAHFQKERGHYESRHALVLTWRPPEPRRSGLTRYVYSDVGSRSATYADKAIETFLTSIREVEQYLANVVSIRRMMTRETTERGGHRVARYDELFQFIRFCITGENHPVRLPEIPMYLDWLVTAELQHGLTPLVENRFLGVVAIDGLPAESWPGILNSLDLMPLTYRWSSRFVFLDAEEARARLERTRKKWQQKARPFFDQLFQTQSRSLDQDAMLMVAETEDAIAEASSQLVAYGYYTPVIVLLDEDQQSLQEKCEAVRRLIQAEGFGARIETINATDAFLGSLPGVSYANIREPLINTRNLADLIPLNSVWSGSPVAPCPFYPAGSPPLMQVASGSTPFRLNLHVDDVGHTLIFGPTGSGKSTLLSLIAAQFRRYAGAQIFAFDKGGSMLPLTLGLGGDHYQIGGDAQEAGKGRALSFCPLAELSTDGDRAFASEWIEMLVALQGVTITPDYRNAISRQVGLMAGSRGRSLSDFVSGVQMREIKDALHHYTVDGPMGQLLDAEEDGLALGAFQCFEIEELMNLGERNLVPVLTYLFRRIEKRLTGAPSLIVLDEAWLMLGHPVFRDKIREWLKVLRKANCAVVLATQSISDAERSGIIDVLKESCPTKICLPNGAAREPGTREFYERIGFNERQIEIVATAIPKRDYYVVSPEGRRLFDMALGPVALSFVGASGKEDLKRIRALHHEHRAAWPLHWLQQRGIAHAHTLFPTE
SIO_010081: At1D132_RS26160
subclass of: SO_0000673
so part of: At1D132_RS26160
location: complement(142487..144949)
location: region:142487-144949:-1
so has part: feature:142487-144949:-1:exon

WP_121652084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142487-144949:-1:exon

At1D132_RS26165
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS26165
old locus tag: At1D132_49920
so part of: sequence
location: complement(144961..145260)
location: region:144961-145260:-1
so has part: feature:144961-145260:-1:exon
subclass of: SO_0000010

39476964
type: Gene
SIO_000068: ncbigene

position:144961:-1
position: 144961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145260:-1
position: 145260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144961-145260:-1:exon

At1D132_RS26165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS26165
old locus tag: At1D132_49920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010892446.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbD
translation: MAEVGSNLMRSRVHRALSRPNLLMGADRELVLVTALAAVILIFVVLTWYAALFGVAVWLVTVAALRMMAKADPLMRRVYIRHISYKTFYRATSSPWRRY
SIO_010081: At1D132_RS26165
subclass of: SO_0000673
so part of: At1D132_RS26165
location: complement(144961..145260)
location: region:144961-145260:-1
so has part: feature:144961-145260:-1:exon

WP_121652085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144961-145260:-1:exon

At1D132_RS26170
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
gene: trbC
locus tag: At1D132_RS26170
old locus tag: At1D132_49930
so part of: sequence
location: complement(145253..145663)
location: region:145253-145663:-1
so has part: feature:145253-145663:-1:exon
subclass of: SO_0000010

39476949
type: Gene
SIO_000068: ncbigene

position:145253:-1
position: 145253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145663:-1
position: 145663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145253-145663:-1:exon

At1D132_RS26170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
gene: trbC
locus tag: At1D132_RS26170
old locus tag: At1D132_49930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003510276.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer pilin TrbC
translation: MSRKTYPIFAPITVAAITFTISAPAFAGSGGGGLPWESPLQQIQQSITGPVAGFIALAAVAIAGAMLIFGGELNDFARRLCYVALVGGVLLGATQIVALFGATGASIGEYHAEAGLDPLVLVPVTTLSVKGEARRG
SIO_010081: At1D132_RS26170
subclass of: SO_0000673
so part of: At1D132_RS26170
location: complement(145253..145663)
location: region:145253-145663:-1
so has part: feature:145253-145663:-1:exon

WP_121652086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145253-145663:-1:exon

At1D132_RS26175
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
gene: trbB
locus tag: At1D132_RS26175
old locus tag: At1D132_49940
so part of: sequence
location: complement(145653..146624)
location: region:145653-146624:-1
so has part: feature:145653-146624:-1:exon
subclass of: SO_0000010

39476970
type: Gene
SIO_000068: ncbigene

position:145653:-1
position: 145653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146624:-1
position: 146624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145653-146624:-1:exon

At1D132_RS26175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
gene: trbB
locus tag: At1D132_RS26175
old locus tag: At1D132_49940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012649102.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer ATPase TrbB
translation: MTQLRSHTRLVRKLQDALGDELCVALDDATVVEIMLNPDGRLFIERLGHGVAEAGVMTPAAAEVVIGSVAHALQSEADDEHPIISGELPIGGHRFEGLLPPVVSGPAFTIRRRASRLIPLSDYVSSKVMTEGQASAIRSAIDARMNIVISGGTGSGKTTLANAIIAEIVSTAPDDRMVILEDTAEIQCSAENAVCLHTSDTIDMSRLLKSTMRLRPDRIIVGEVRDGAALTLLKAWNTGHPGGVTTIHSNTAMSALRRLEQLTAEASQQPMQEVIGEAVDLVVSVERTGKGRRVREVIHIEGYRNNHYQTKHYAQIDEDSHVA
SIO_010081: At1D132_RS26175
subclass of: SO_0000673
so part of: At1D132_RS26175
location: complement(145653..146624)
location: region:145653-146624:-1
so has part: feature:145653-146624:-1:exon

WP_121652087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145653-146624:-1:exon

At1D132_RS26180
type: Gene
subclass of: SO_0000704
RO_0002162: 1176649
locus tag: At1D132_RS26180
old locus tag: At1D132_49950
so part of: sequence
location: complement(146621..147256)
location: region:146621-147256:-1
so has part: feature:146621-147256:-1:exon
subclass of: SO_0000010

39476988
type: Gene
SIO_000068: ncbigene

position:146621:-1
position: 146621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147256:-1
position: 147256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146621-147256:-1:exon

At1D132_RS26180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1176649
locus tag: At1D132_RS26180
old locus tag: At1D132_49950
EC number: 2.3.1.184
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003510279.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-homoserine-lactone synthase
translation: MQVLTISPDRYVEHQSLLKQMHRLRADVFGGRLEWDVAITDGGERDQYDELNPTYILATYGNKVVGCARLLPTLGPTMLELTFPQLLRDGSLNANTTMIESSRFCVDTTLPAGRGGGQLHLATLTMFAGIIEWSMANGYDRIVTATDLRFERILNRAGWPMARLGEPVAIGNTVAIAGILPADQESFEQVRPSNYRSALSCTDDHSGRSAA
SIO_010081: At1D132_RS26180
subclass of: SO_0000673
so part of: At1D132_RS26180
location: complement(146621..147256)
location: region:146621-147256:-1
so has part: feature:146621-147256:-1:exon

WP_121652088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146621-147256:-1:exon