Mycolicibacterium frederiksbergense strain LB 501T plasmid unnamed3.
type: Entry
definition: Mycolicibacterium frederiksbergense strain LB 501T plasmid unnamed3.
sequence version: NZ_CP038796.1
sequence date: 2023-07-16
sequence: sequence
division: CON
label: NZ_CP038796.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN10915336
keyword: RefSeq
source: Mycolicibacterium frederiksbergense (Mycobacterium frederiksbergense)
organism: Mycolicibacterium frederiksbergense
taxonomy: Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP038796.1.\nBacteria and source DNA available from Catholic University of\nLouvain Earth & Life Institute Laboratory of Bioengineering Place\nCroix du Sud, 2/19, L7.05.19 1348 Louvain-la-Neuve Belgium.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 194.0x\nSequencing Technology :: PacBio RSII; Illumina NextSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 07/16/2023 12:10:51\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,537\nCDSs (total) :: 6,482\nGenes (coding) :: 6,281\nCDSs (with protein) :: 6,281\nGenes (RNA) :: 55\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 46\nncRNAs :: 3\nPseudo Genes (total) :: 201\nCDSs (without protein) :: 201\nPseudo Genes (ambiguous residues) :: 0 of 201\nPseudo Genes (frameshifted) :: 118 of 201\nPseudo Genes (incomplete) :: 115 of 201\nPseudo Genes (internal stop) :: 14 of 201\nPseudo Genes (multiple problems) :: 40 of 201\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000155
sequence length: 16966
topology: linear
so has quality: SO_0000987
location: 1..16966
location: region:1-16966:1
RO_0002162: 117567

NZ_CP038796
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN10915336
type: BioSample
SIO_000068: biosample

1
title: Draft, Whole-Genome Sequence of the Anthracene-degrading Mycobacterium frederiksbergense LB501T, Isolated from a Polycyclic Aromatic Hydrocarbon (PAH)-Contaminated Soil
author: Augelletti, F.
journal: Unpublished

2
title: Direct Submission
author: Augelletti, F.
journal: Submitted (03-APR-2019) Laboratory of Bioengineering, Catholic University of Louvain, Place Croix du Sud, 2/19, L7.05.19, Louvain-la-Neuve 1348, Belgium

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16966:1
position: 16966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16966:1:source
so part of: sequence
organism: Mycolicibacterium frederiksbergense
mol type: genomic DNA
strain: LB 501T
isolation source: polycyclic aromatic hydrocarbon (PAH)-contaminated soil
plasmid: unnamed3
country: Belgium
collection date: 2000

117567
type: Taxonomy
SIO_000068: taxonomy

EXE63_RS32565
type: Gene
subclass of: SO_0000704
RO_0002162: 117567
locus tag: EXE63_RS32565
so part of: sequence
location: 262..579
location: region:262-579:1
so has part: feature:262-579:1:exon
subclass of: SO_0000010

position:262:1
position: 262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579:1
position: 579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262-579:1:exon

EXE63_RS32565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 117567
locus tag: EXE63_RS32565
inference: COORDINATES: protein motif:HMM:NF020897.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MRLTDASEYLRVASSTAHRLLSMLQYRGFVRQDPASKAYQPGPSLTNVAFAVHSRRTYHARPPRFCASWSTRFRNRARRNVGRQTGSLHRDTRKPFCRPGDLAFG
SIO_010081: EXE63_RS32565
subclass of: SO_0000673
so part of: EXE63_RS32565
location: 262..579
location: region:262-579:1
so has part: feature:262-579:1:exon

WP_234904089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:262-579:1:exon

EXE63_RS32570
type: Gene
subclass of: SO_0000704
RO_0002162: 117567
locus tag: EXE63_RS32570
so part of: sequence
location: 560..823
location: region:560-823:1
so has part: feature:560-823:1:exon
subclass of: SO_0000010

position:560:1
position: 560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823:1
position: 823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560-823:1:exon

EXE63_RS32570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 117567
locus tag: EXE63_RS32570
inference: COORDINATES: protein motif:HMM:NF013757.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IclR family transcriptional regulator C-terminal domain-containing protein
translation: MISRLGSTRPAHCTSTGKVYSPAYPTTSWTSCTRPHLEPLTEHSVRTLTELRTQLAEVRKSGFAISRQESEEGVASVAVRYPKVVPG
SIO_010081: EXE63_RS32570
subclass of: SO_0000673
so part of: EXE63_RS32570
location: 560..823
location: region:560-823:1
so has part: feature:560-823:1:exon

WP_234904090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:560-823:1:exon

EXE63_RS32575
type: Gene
subclass of: SO_0000704
RO_0002162: 117567
locus tag: EXE63_RS32575
so part of: sequence
location: 1240..1434
location: region:1240-1434:1
so has part: feature:1240-1434:1:exon
subclass of: SO_0000010

position:1240:1
position: 1240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1434:1
position: 1434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1240-1434:1:exon

EXE63_RS32575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 117567
locus tag: EXE63_RS32575
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSISSLEGARVGQRRIHRSAFRTWLIRIADDEMRVKRVIIDGFANLNENARTVFAIPDEGFDE
SIO_010081: EXE63_RS32575
subclass of: SO_0000673
so part of: EXE63_RS32575
location: 1240..1434
location: region:1240-1434:1
so has part: feature:1240-1434:1:exon

WP_234904083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1240-1434:1:exon

EXE63_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 117567
gene: istA
locus tag: EXE63_RS00015
old locus tag: EXE63_00015
pseudo: true
so part of: sequence
location: 2123..3609
location: region:2123-3609:1
so has part: feature:2123-3609:1:exon
subclass of: SO_0000010

position:2123:1
position: 2123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3609:1
position: 3609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2123-3609:1:exon

EXE63_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 117567
gene: istA
locus tag: EXE63_RS00015
old locus tag: EXE63_00015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611569.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: EXE63_RS00015
subclass of: SO_0000673
so part of: EXE63_RS00015
location: 2123..3609
location: region:2123-3609:1
so has part: feature:2123-3609:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2123-3609:1:exon

EXE63_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 117567
locus tag: EXE63_RS00020
old locus tag: EXE63_00020
pseudo: true
so part of: sequence
location: 3625..>3999
location: region:3625-3999:1
so has part: feature:3625-3999:1:exon
subclass of: SO_0000010

position:3625:1
position: 3625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3999:1
position: 3999
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3625-3999:1:exon

EXE63_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 117567
locus tag: EXE63_RS00020
old locus tag: EXE63_00020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014817062.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-binding protein
SIO_010081: EXE63_RS00020
subclass of: SO_0000673
so part of: EXE63_RS00020
location: 3625..>3999
location: region:3625-3999:1
so has part: feature:3625-3999:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3625-3999:1:exon

EXE63_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 117567
locus tag: EXE63_RS00025
old locus tag: EXE63_00025
so part of: sequence
location: complement(4073..4387)
location: region:4073-4387:-1
so has part: feature:4073-4387:-1:exon
subclass of: SO_0000010

position:4073:-1
position: 4073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4387:-1
position: 4387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4073-4387:-1:exon

EXE63_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 117567
locus tag: EXE63_RS00025
old locus tag: EXE63_00025
inference: COORDINATES: protein motif:HMM:NF040041.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVKRGDPITFQAVQREAAVSHAFLYNHPELRKRIEHLRGTRPRPRRPIRGHRQHARHHADPPDRRTQETAPPATQSTPRRTRTSTRREPRPTARTGPPRHPALA
SIO_010081: EXE63_RS00025
subclass of: SO_0000673
so part of: EXE63_RS00025
location: complement(4073..4387)
location: region:4073-4387:-1
so has part: feature:4073-4387:-1:exon

WP_234904091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4073-4387:-1:exon

EXE63_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 117567
locus tag: EXE63_RS00030
old locus tag: EXE63_00030
pseudo: true
so part of: sequence
location: complement(4482..6652)
location: region:4482-6652:-1
so has part: feature:4482-6652:-1:exon
subclass of: SO_0000010

position:4482:-1
position: 4482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6652:-1
position: 6652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4482-6652:-1:exon

EXE63_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 117567
locus tag: EXE63_RS00030
old locus tag: EXE63_00030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013470989.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
SIO_010081: EXE63_RS00030
subclass of: SO_0000673
so part of: EXE63_RS00030
location: complement(4482..6652)
location: region:4482-6652:-1
so has part: feature:4482-6652:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4482-6652:-1:exon

EXE63_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 117567
locus tag: EXE63_RS00035
old locus tag: EXE63_00035
so part of: sequence
location: complement(6649..7830)
location: region:6649-7830:-1
so has part: feature:6649-7830:-1:exon
subclass of: SO_0000010

position:6649:-1
position: 6649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7830:-1
position: 7830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6649-7830:-1:exon

EXE63_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 117567
locus tag: EXE63_RS00035
old locus tag: EXE63_00035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013470154.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MAYPVAVCPAGGQRTWTVLGEDFATVGPIEEWIEAHRHLWSPNTVRGYATSLAQWWSFLEQRGQTDGWRDVGVPAFTAFLSWQRNGRTVEHRLTGSGPTPTAATLEVRLAAVISFYRWHQAVSGVAVAGRLLRGAPRHRPARGLLAHLDARSAPVASSLVRVRRDRRRDRPPVLLPEQIQAILDGCAVFDAESGSWRGNLRDRFVFALLAETGMRLGEALGLRIGEFVLGRGGTAYVQIVPRSDNPNGARVKMMRPRRVYVGADLERLFADYLTDIACRATEGGIALTDTSPLLVNVFRPPLLAALRETTVREKVATLRRRCIGPPGWTPHWFRHTHATALLLAGTPEWVVSRRLGHAHVQTTLDLYGWVRDDEALRAAANWASYASSWRVAE
SIO_010081: EXE63_RS00035
subclass of: SO_0000673
so part of: EXE63_RS00035
location: complement(6649..7830)
location: region:6649-7830:-1
so has part: feature:6649-7830:-1:exon

WP_168140271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6649-7830:-1:exon

EXE63_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 117567
locus tag: EXE63_RS00040
old locus tag: EXE63_00040
pseudo: true
so part of: sequence
location: <7952..8388
location: region:7952-8388:1
so has part: feature:7952-8388:1:exon
subclass of: SO_0000010

position:7952:1
position: 7952
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:8388:1
position: 8388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7952-8388:1:exon

EXE63_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 117567
locus tag: EXE63_RS00040
old locus tag: EXE63_00040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014817062.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-binding protein
SIO_010081: EXE63_RS00040
subclass of: SO_0000673
so part of: EXE63_RS00040
location: <7952..8388
location: region:7952-8388:1
so has part: feature:7952-8388:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7952-8388:1:exon

EXE63_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 117567
locus tag: EXE63_RS00045
old locus tag: EXE63_00045
pseudo: true
so part of: sequence
location: <8461..>8772
location: region:8461-8772:1
so has part: feature:8461-8772:1:exon
subclass of: SO_0000010

position:8461:1
position: 8461
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:8772:1
position: 8772
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8461-8772:1:exon

EXE63_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 117567
locus tag: EXE63_RS00045
old locus tag: EXE63_00045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005208105.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
SIO_010081: EXE63_RS00045
subclass of: SO_0000673
so part of: EXE63_RS00045
location: <8461..>8772
location: region:8461-8772:1
so has part: feature:8461-8772:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8461-8772:1:exon

EXE63_RS33185
type: Gene
subclass of: SO_0000704
RO_0002162: 117567
locus tag: EXE63_RS33185
so part of: sequence
location: 11259..11714
location: region:11259-11714:1
so has part: feature:11259-11714:1:exon
subclass of: SO_0000010

position:11259:1
position: 11259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11714:1
position: 11714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11259-11714:1:exon

EXE63_RS33185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 117567
locus tag: EXE63_RS33185
inference: COORDINATES: protein motif:HMM:NF020332.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase domain-containing protein
translation: MRQVAAADSTERGRSTLADYYSAKGEAPGQWMGRGLTALSDTGRCEVSAQAREQIWTVEAGSGVSEEQMRALYGRVYTPTLSASRTTSPGEVSVHNGRRACWGASSSSATASRSSPAAWRWATATTTPKRASTGTPPSPRMSAPGSAPVWP
SIO_010081: EXE63_RS33185
subclass of: SO_0000673
so part of: EXE63_RS33185
location: 11259..11714
location: region:11259-11714:1
so has part: feature:11259-11714:1:exon

WP_272955780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11259-11714:1:exon

EXE63_RS33190
type: Gene
subclass of: SO_0000704
RO_0002162: 117567
locus tag: EXE63_RS33190
pseudo: true
so part of: sequence
location: 11618..>11832
location: region:11618-11832:1
so has part: feature:11618-11832:1:exon
subclass of: SO_0000010

position:11618:1
position: 11618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11832:1
position: 11832
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11618-11832:1:exon

EXE63_RS33190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 117567
locus tag: EXE63_RS33190
inference: COORDINATES: protein motif:HMM:NF020332.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: EXE63_RS33190
subclass of: SO_0000673
so part of: EXE63_RS33190
location: 11618..>11832
location: region:11618-11832:1
so has part: feature:11618-11832:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11618-11832:1:exon

EXE63_RS32580
type: Gene
subclass of: SO_0000704
RO_0002162: 117567
gene: mobF
locus tag: EXE63_RS32580
pseudo: true
so part of: sequence
location: 11878..12428
location: region:11878-12428:1
so has part: feature:11878-12428:1:exon
subclass of: SO_0000010

position:11878:1
position: 11878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12428:1
position: 12428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11878-12428:1:exon

EXE63_RS32580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 117567
gene: mobF
locus tag: EXE63_RS32580
inference: COORDINATES: protein motif:HMM:NF020332.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MobF family relaxase
SIO_010081: EXE63_RS32580
subclass of: SO_0000673
so part of: EXE63_RS32580
location: 11878..12428
location: region:11878-12428:1
so has part: feature:11878-12428:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11878-12428:1:exon

EXE63_RS32585
type: Gene
subclass of: SO_0000704
RO_0002162: 117567
locus tag: EXE63_RS32585
so part of: sequence
location: 12755..13759
location: region:12755-13759:1
so has part: feature:12755-13759:1:exon
subclass of: SO_0000010

position:12755:1
position: 12755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13759:1
position: 13759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12755-13759:1:exon

EXE63_RS32585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 117567
locus tag: EXE63_RS32585
inference: COORDINATES: protein motif:HMM:NF024991.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MPHARIADAELGEPGALRRRDGASVYSRHGVAVYTSAATLAAERRILSAVGREDGRRASAGDAELALADSGARGRTLNPGQAALVSEMATCGRRVALALAPAGTGKTTAMAALAHAWRSSGGHVIGLAPTADAAIVLGEDLGATTDTLDKYVWSADPTKAVLGRPKWFEKVGPDTLIVVDEAGKAATAGLDAMITDALRKGASVRLVGDDGQLSSISAGGVLRDIAEATDALTLSEVVRFRSAAEAAAGLALHDADPAGIGFYIDHHRVHVGTDDTAADMAYRAWRATWPPAQTRYCWPPPTTSSTRSTHAPAPTASPPTPTPRALPPWCWPTS
SIO_010081: EXE63_RS32585
subclass of: SO_0000673
so part of: EXE63_RS32585
location: 12755..13759
location: region:12755-13759:1
so has part: feature:12755-13759:1:exon

WP_234904085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12755-13759:1:exon

EXE63_RS32590
type: Gene
subclass of: SO_0000704
RO_0002162: 117567
locus tag: EXE63_RS32590
so part of: sequence
location: 13871..14044
location: region:13871-14044:1
so has part: feature:13871-14044:1:exon
subclass of: SO_0000010

position:13871:1
position: 13871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14044:1
position: 14044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13871-14044:1:exon

EXE63_RS32590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 117567
locus tag: EXE63_RS32590
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAASKPAICAAAHRHPAADYIAEHVTLGYAATIDSAQGLTAGRRDTKAAATSSARTC
SIO_010081: EXE63_RS32590
subclass of: SO_0000673
so part of: EXE63_RS32590
location: 13871..14044
location: region:13871-14044:1
so has part: feature:13871-14044:1:exon

WP_234904086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13871-14044:1:exon

EXE63_RS32595
type: Gene
subclass of: SO_0000704
RO_0002162: 117567
locus tag: EXE63_RS32595
so part of: sequence
location: 14172..14357
location: region:14172-14357:1
so has part: feature:14172-14357:1:exon
subclass of: SO_0000010

position:14172:1
position: 14172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14357:1
position: 14357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14172-14357:1:exon

EXE63_RS32595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 117567
locus tag: EXE63_RS32595
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRTLARDGAQVSATTAARQASDPAARLAAAADMYYDALGAAAENRLGVGAGTDSTPSPMK
SIO_010081: EXE63_RS32595
subclass of: SO_0000673
so part of: EXE63_RS32595
location: 14172..14357
location: region:14172-14357:1
so has part: feature:14172-14357:1:exon

WP_234904087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14172-14357:1:exon

EXE63_RS32600
type: Gene
subclass of: SO_0000704
RO_0002162: 117567
locus tag: EXE63_RS32600
so part of: sequence
location: complement(14439..14786)
location: region:14439-14786:-1
so has part: feature:14439-14786:-1:exon
subclass of: SO_0000010

position:14439:-1
position: 14439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14786:-1
position: 14786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14439-14786:-1:exon

EXE63_RS32600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 117567
locus tag: EXE63_RS32600
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSASSTPTAARNTAISAVSARLTVIRVAPRLGGRVGPALRALADGVGEGVDELFAPRQVVAPLEIISKYGRNRGQPAQHPDSGGVGSSGIDPVVQDGGRVGGIIDAALASASTSS
SIO_010081: EXE63_RS32600
subclass of: SO_0000673
so part of: EXE63_RS32600
location: complement(14439..14786)
location: region:14439-14786:-1
so has part: feature:14439-14786:-1:exon

WP_234904088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14439-14786:-1:exon

EXE63_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 117567
locus tag: EXE63_RS00060
old locus tag: EXE63_00065
so part of: sequence
location: 15804..16280
location: region:15804-16280:1
so has part: feature:15804-16280:1:exon
subclass of: SO_0000010

position:15804:1
position: 15804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16280:1
position: 16280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15804-16280:1:exon

EXE63_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 117567
locus tag: EXE63_RS00060
old locus tag: EXE63_00065
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEQWADADADYNDILRMIEHARTQLDTLHAAPSPTISTSPRPKRSGLSHPRLPEQPPSLQFQQAFAEAQAARTAAAGGHKIVTEHDIVTARGDAERADQAARAALHDRPKHCAASSIARPRPGRSLRRRPTATSDTLETLLDSARAEVELLRAAPHRL
SIO_010081: EXE63_RS00060
subclass of: SO_0000673
so part of: EXE63_RS00060
location: 15804..16280
location: region:15804-16280:1
so has part: feature:15804-16280:1:exon

WP_168140272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15804-16280:1:exon