Chamaesiphon minutus PCC 6605 plasmid pCHA6605.02, complete sequence.
type: Entry
definition: Chamaesiphon minutus PCC 6605 plasmid pCHA6605.02, complete sequence.
sequence version: NC_019698.1
sequence date: 2022-12-29
sequence: sequence
division: CON
label: NC_019698.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02261345
keyword: GSC:MIGS:2.1
keyword: RefSeq
source: Chamaesiphon minutus PCC 6605
organism: Chamaesiphon minutus PCC 6605
taxonomy: Bacteria; Cyanobacteriota; Cyanophyceae; Synechococcales; Chamaesiphonaceae; Chamaesiphon.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP003602.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4091622\nSource DNA and Organism available from Cheryl A. Kerfeld\n(CKerfeld@lbl.gov)\n Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov)\nWhole genome sequencing and draft assembly at JGI-PGF\nAnnotation by JGI-ORNL\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##MIGS-Data-START##\ninvestigation_type :: bacteria_archaea\nproject_name :: Chamaesiphon sp. PCC 6605\ncollection_date :: Missing\nlat_lon :: 37.896 -122.250\ndepth :: Missing\nalt_elev :: Missing\ncountry :: USA\nenvironment :: Missing\nnum_replicons :: 3\nref_biomaterial :: PCC 6605, ATCC 27169\nbiotic_relationship :: Free living\ntrophic_level :: Missing\nrel_to_oxygen :: Missing\nisol_growth_condt :: Missing\nsequencing_meth :: WGS\nassembly :: Newbler v. 2.3 (pre-release), VELVET v.\n 1.0.13, Parallel phrap v. 4.24 SPS\nfinishing_strategy :: Finished\nGOLD Stamp ID :: Gi07565\nFunding Program :: DOE-GEBA 2009\nIsolation Site :: freshwater\nIsolation Comments :: isolated by MM Allen\nTemperature Range :: Mesophile\nGram Staining :: Gram-\nDiseases :: None\n##MIGS-Data-END##\n\n##Genome-Assembly-Data-START##\nFinishing Goal :: Finished\nCurrent Finishing Status :: Finished\nAssembly Method :: Newbler v. 2.3 (pre-release), VELVET v.\n 1.0.13, Parallel phrap v. 4.24 SPS\nGenome Coverage :: 30x\nSequencing Technology :: 454/Illumina\n##Genome-Assembly-Data-E…

sequence
subclass of: SO_0000155
sequence length: 31019
topology: circular
so has quality: SO_0000988
location: 1..31019
location: region:1-31019:1
RO_0002162: 1173020

NC_019698
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02261345
type: BioSample
SIO_000068: biosample

1
title: Finished plasmid 2 of genome of Chamaesiphon sp. PCC 6605
author: Gugger, M.
author: Coursin, T.
author: Rippka, R.
author: Tandeau De Marsac, N.
author: Huntemann, M.
author: Wei, C.-L.
author: Han, J.
author: Detter, J.C.
author: Han, C.
author: Tapia, R.
author: Chen, A.
author: Kyrpides, N.
author: Mavromatis, K.
author: Markowitz, V.
author: Szeto, E.
author: Ivanova, N.
author: Pagani, I.
author: Pati, A.
author: Goodwin, L.
author: Nordberg, H.P.
author: Cantor, M.N.
author: Hua, S.X.
author: Woyke, T.
author: Kerfeld, C.A.
journal: Unpublished

2
title: Direct Submission
author: Gugger, M.
author: Coursin, T.
author: Rippka, R.
author: Tandeau De Marsac, N.
author: Huntemann, M.
author: Wei, C.-L.
author: Han, J.
author: Detter, J.C.
author: Han, C.
author: Tapia, R.
author: Chen, A.
author: Kyrpides, N.
author: Mavromatis, K.
author: Markowitz, V.
author: Szeto, E.
author: Ivanova, N.
author: Pagani, I.
author: Pati, A.
author: Goodwin, L.
author: Nordberg, H.P.
author: Cantor, M.N.
author: Hua, S.X.
author: Woyke, T.
author: Kerfeld, C.A.
journal: Submitted (25-MAY-2012) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31019:1
position: 31019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-31019:1:source
so part of: sequence
organism: Chamaesiphon minutus PCC 6605
mol type: genomic DNA
strain: PCC 6605
isolation source: freshwater
type material: type strain of Chamaesiphon minutus
plasmid: pCHA6605.02
country: USA
lat lon: 37.896 N 122.250 W
collected by: MM Allen

1173020
type: Taxonomy
SIO_000068: taxonomy

CHA6605_RS30955
type: Gene
subclass of: SO_0000704
RO_0002162: 1173020
gene: tnpC
locus tag: CHA6605_RS30955
old locus tag: Cha6605_6417
so part of: sequence
location: 677..1045
location: region:677-1045:1
so has part: feature:677-1045:1:exon
subclass of: SO_0000010

position:677:1
position: 677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045:1
position: 1045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677-1045:1:exon

CHA6605_RS30955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1173020
gene: tnpC
locus tag: CHA6605_RS30955
old locus tag: Cha6605_6417
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017740842.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase post-transcriptional regulator TnpC
translation: MSEKNHETDYGTLNSKKLDELQRSFDTTKILAAVDTIDEIRYRICEPDGMRQDLLDLHSMAHTIINGDSTLNAPRGTCIWEVAQDLELEIDEFATKLSEIANLLAKLGELVPDDEDEDEDED
SIO_010081: CHA6605_RS30955
subclass of: SO_0000673
so part of: CHA6605_RS30955
location: 677..1045
location: region:677-1045:1
so has part: feature:677-1045:1:exon

WP_015162884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:677-1045:1:exon

CHA6605_RS30960
type: Gene
subclass of: SO_0000704
RO_0002162: 1173020
locus tag: CHA6605_RS30960
old locus tag: Cha6605_6418
so part of: sequence
location: complement(1156..2175)
location: region:1156-2175:-1
so has part: feature:1156-2175:-1:exon
subclass of: SO_0000010

position:1156:-1
position: 1156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2175:-1
position: 2175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1156-2175:-1:exon

CHA6605_RS30960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1173020
locus tag: CHA6605_RS30960
old locus tag: Cha6605_6418
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015227823.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4351 domain-containing protein
translation: MNKWSSEYVILHLLLANDMGKKKPQTDSTGNIDHDQLFKQLLTTFFLEFLELFAPDLFVAIEPESLEFLPQEYFTDIGVGKRRAMDIIVRVRLRGRPNAPESGRVSVVVNCEHQSGTETDFHRRIFFYFAQLHRKYLQIVYPIALFSFDKPFREEKNNYQVNAPGLQILDFNFLTIQLNQLNWRDFLKRPNPVAAALMAKMSIDPADRPRVKVECLRMIAKLKLDRARTFLLSGFIDSYLRLNSAEQEQFRVEVDKIKLPQERENIMEITTSWKEEGRIEGRVEGQRALAIKLLTRKLGNLSPELLSRLNGLSLDRVEALAEELLDFTSVGDLEVWLAR
SIO_010081: CHA6605_RS30960
subclass of: SO_0000673
so part of: CHA6605_RS30960
location: complement(1156..2175)
location: region:1156-2175:-1
so has part: feature:1156-2175:-1:exon

WP_232432355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1156-2175:-1:exon

CHA6605_RS30965
type: Gene
subclass of: SO_0000704
RO_0002162: 1173020
locus tag: CHA6605_RS30965
old locus tag: Cha6605_6419
so part of: sequence
location: 2305..2943
location: region:2305-2943:1
so has part: feature:2305-2943:1:exon
subclass of: SO_0000010

position:2305:1
position: 2305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2943:1
position: 2943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2305-2943:1:exon

CHA6605_RS30965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1173020
locus tag: CHA6605_RS30965
old locus tag: Cha6605_6419
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012308507.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family partition ATPase
translation: MILTIANQKGGSGKTTISIHLAHAIALAKKKVLLVDADPQGSASVWASARTEVSPFPVIAMARETLHRDLPEIASNYQHCVIDTAPRVSALARSAILAADLTLIPVQPSSYDVWAAAETVALIKEAQQFRPEIQAAFLINRKIPRTAIGREINGALADLCFPVLDATISQRVAFAESSAGATVLEFAATSEASDEIKALSKCVLKFMGVKSW
SIO_010081: CHA6605_RS30965
subclass of: SO_0000673
so part of: CHA6605_RS30965
location: 2305..2943
location: region:2305-2943:1
so has part: feature:2305-2943:1:exon

WP_015162886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2305-2943:1:exon

CHA6605_RS30970
type: Gene
subclass of: SO_0000704
RO_0002162: 1173020
locus tag: CHA6605_RS30970
old locus tag: Cha6605_6420
so part of: sequence
location: 2937..3260
location: region:2937-3260:1
so has part: feature:2937-3260:1:exon
subclass of: SO_0000010

position:2937:1
position: 2937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3260:1
position: 3260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2937-3260:1:exon

CHA6605_RS30970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1173020
locus tag: CHA6605_RS30970
old locus tag: Cha6605_6420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012308508.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVKRPLIAKKPTTNNLNPTVDDWIERGGIDPEIQTATSEEVIQPPSPQVAAEPESQEKQEKPFPHRISFDMGKEQYKRLKFASFESERSMNEILREAVENWLKEGKH
SIO_010081: CHA6605_RS30970
subclass of: SO_0000673
so part of: CHA6605_RS30970
location: 2937..3260
location: region:2937-3260:1
so has part: feature:2937-3260:1:exon

WP_015162887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2937-3260:1:exon

CHA6605_RS30975
type: Gene
subclass of: SO_0000704
RO_0002162: 1173020
locus tag: CHA6605_RS30975
old locus tag: Cha6605_6421
so part of: sequence
location: 3379..4185
location: region:3379-4185:1
so has part: feature:3379-4185:1:exon
subclass of: SO_0000010

position:3379:1
position: 3379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4185:1
position: 4185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3379-4185:1:exon

CHA6605_RS30975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1173020
locus tag: CHA6605_RS30975
old locus tag: Cha6605_6421
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDTIINDELDSETNLDPEIDILSLYTGEKDVYPQNWDAVNRLGQESDLLAKGVLTSFGVSEILAILSLVNPAIAFVSWALTFAFFSNEYIWRVRRLYVVAKSILDHYGDDNVVLTPRVKTDTAAIDLLVKMPDRRMFALMTRANEDREVIWREDRQEFFIKKNGKHAKRAIALTKAIESLQTVSYLRKIKHPLMGITAAERNAPLIKAIVLAPGARIVAYEDSPLWTEFGGARVLRIQTTSVTYVVECKDLINFLQPIQKNGESTPK
SIO_010081: CHA6605_RS30975
subclass of: SO_0000673
so part of: CHA6605_RS30975
location: 3379..4185
location: region:3379-4185:1
so has part: feature:3379-4185:1:exon

WP_015162888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3379-4185:1:exon

CHA6605_RS30980
type: Gene
subclass of: SO_0000704
RO_0002162: 1173020
locus tag: CHA6605_RS30980
old locus tag: Cha6605_6422
so part of: sequence
location: 4484..7393
location: region:4484-7393:1
so has part: feature:4484-7393:1:exon
subclass of: SO_0000010

position:4484:1
position: 4484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7393:1
position: 7393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4484-7393:1:exon

CHA6605_RS30980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1173020
locus tag: CHA6605_RS30980
old locus tag: Cha6605_6422
inference: COORDINATES: protein motif:HMM:NF024367.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3854 domain-containing protein
translation: MTQQKLQSELQQSAIDPQIAALNFGEVGQTEAFAFIVRTPKRRNDGRLTDGHLRIYEQFEAGGWIGRGIDPLTMQPSEWGCLKPYNPRIDDIKRKAIKYEHPHKQPTELFCLRVTWESGRKIAIRSGLESEYLARMDSAASPRDEDREFWQWVKDTPQLTIIITEGAKKAAALLSAGYCAIGLPGIYGGYRAQREGVPCQPYLIPQLKVFTQPGREFVFAFDRDTNPKTIAAVRTATDKTGRLLERSGCKVSVMTWTHAHKGVDDLIYHAGATALDAIYADRSSLDNWRLQGNFSLDRYEAVRINSRYFDAAVRPNKLEGKIVGVKSAKGTGKTEWLAELVKPYINDGRGVLILTHRVQLAQALAERLGIPHVSEVYQHGQLLGFALCVDSLHANAQVKFDPTVWEGAAVVIDEAEQVIWHLLNSGTCSSKRAEILANFGVLLQTIAATGGTIFLTDADLSGNTIEYVQKLTGGMPLWLAINDYNPVAGKRTLILHKSPADLLAALITDINAGKNIILHCSAKDVKSKWAAQHLETAIKQTCPGVSTLCCDSDNVADKEHPAYGIVNRLGDLARYQVVIATSVIETGVSIDGHHFDAVYCLANGVQTVDAVSQTIERVRSDVPRHMAITTGSIGWIGNGSSNPRQLIASQKQVAKFNLAALSQQDAALQLDEMEACHVLTWANYAAKTNAEFRGYKLNIITKLEREGYEIVECAPDRHQENWDECLDEIRNVNYTQQRQDIIDTSAPDEVELQRLKKQRGKTKAERLKLAKGRLVERYGTDEITDELIVKDDSGWYPKIRLHYYLTIGREFAAAKDRDRLQSLAHEDRALPMDINRSCMSGKLQILDALNIKQFFGEDKVFTADSLAEWHEWVQRYRGAIKNALGLSISAESNPIQTAQRLLGLVGLQLTYIDQVREGGSRVRRYAGVEQDVDDGREEIFGRWFARDLAKCHTTANKSIERGGETEVAC
SIO_010081: CHA6605_RS30980
subclass of: SO_0000673
so part of: CHA6605_RS30980
location: 4484..7393
location: region:4484-7393:1
so has part: feature:4484-7393:1:exon

WP_015162889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4484-7393:1:exon

CHA6605_RS30985
type: Gene
subclass of: SO_0000704
RO_0002162: 1173020
locus tag: CHA6605_RS30985
old locus tag: Cha6605_6423
so part of: sequence
location: complement(7822..8412)
location: region:7822-8412:-1
so has part: feature:7822-8412:-1:exon
subclass of: SO_0000010

position:7822:-1
position: 7822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8412:-1
position: 8412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7822-8412:-1:exon

CHA6605_RS30985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1173020
locus tag: CHA6605_RS30985
old locus tag: Cha6605_6423
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPEVTISMLEANKWSLGETLESYRGEFAAIPQQIKEAADAERESLKATADLGAIQAQTRINDAVLTLLPNIRADIRTDVGRSAGAAFKRIELGRGMLSLWGGGMIAAALLILGILIDSGVYRFVFTHPKQVQAFQTIYGWQVAIALSLPPFLGLGIYALQDDYNNELKFAGWLVIVASVVGFLVPGLKIMGWWFWK
SIO_010081: CHA6605_RS30985
subclass of: SO_0000673
so part of: CHA6605_RS30985
location: complement(7822..8412)
location: region:7822-8412:-1
so has part: feature:7822-8412:-1:exon

WP_015162890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7822-8412:-1:exon

CHA6605_RS30990
type: Gene
subclass of: SO_0000704
RO_0002162: 1173020
locus tag: CHA6605_RS30990
old locus tag: Cha6605_6424
so part of: sequence
location: complement(8908..9093)
location: region:8908-9093:-1
so has part: feature:8908-9093:-1:exon
subclass of: SO_0000010

position:8908:-1
position: 8908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9093:-1
position: 9093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8908-9093:-1:exon

CHA6605_RS30990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1173020
locus tag: CHA6605_RS30990
old locus tag: Cha6605_6424
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSREDLIGGAERYLRRKLTDSEIQQLLHASDSYRFGNNDALWMIISVTSGITWPKRPSYA
SIO_010081: CHA6605_RS30990
subclass of: SO_0000673
so part of: CHA6605_RS30990
location: complement(8908..9093)
location: region:8908-9093:-1
so has part: feature:8908-9093:-1:exon

WP_015162891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8908-9093:-1:exon

CHA6605_RS30995
type: Gene
subclass of: SO_0000704
RO_0002162: 1173020
locus tag: CHA6605_RS30995
old locus tag: Cha6605_6425
so part of: sequence
location: complement(9090..9767)
location: region:9090-9767:-1
so has part: feature:9090-9767:-1:exon
subclass of: SO_0000010

position:9090:-1
position: 9090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9767:-1
position: 9767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9090-9767:-1:exon

CHA6605_RS30995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1173020
locus tag: CHA6605_RS30995
old locus tag: Cha6605_6425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016919205.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oxyanion-translocating ATPase
translation: MNPIYMIGGGKGGVGKSIVSMALVDYLCEIGKDCYLIETDTSNPDVFKSYGEAVPAQILNLDKANGWIDLVNLCEEHRDKTIVINGAARSNDGVSKYGENLRGVLKDLDRSLITFWTINMQRDSVELLKQYMEVMQGTTIHVVRNGMFGDEDEFALYNSSGVRKAIEKQGKSLMLGELAERVSRVLYNDRRTIAQAIAEMPLGNKAELLRWRGECKKMFDLVVKL
SIO_010081: CHA6605_RS30995
subclass of: SO_0000673
so part of: CHA6605_RS30995
location: complement(9090..9767)
location: region:9090-9767:-1
so has part: feature:9090-9767:-1:exon

WP_015162892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9090-9767:-1:exon

CHA6605_RS32310
type: Gene
subclass of: SO_0000704
RO_0002162: 1173020
locus tag: CHA6605_RS32310
old locus tag: Cha6605_6426
so part of: sequence
location: complement(9780..10205)
location: region:9780-10205:-1
so has part: feature:9780-10205:-1:exon
subclass of: SO_0000010

position:9780:-1
position: 9780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10205:-1
position: 10205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9780-10205:-1:exon

CHA6605_RS32310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1173020
locus tag: CHA6605_RS32310
old locus tag: Cha6605_6426
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009873357.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGYKLEQVEAIASKLRALPAIEPPPKDLTKQEVVKMLAKEIKSLQKRGYTLEQIASSLKGEGLDISTPTLKSYLQKVKTPNKPKVAGKELSKTLPASSTSPTLPAAGASPVAEVAEVKVTGDNKKSHSKSGSLPRPDSVDL
SIO_010081: CHA6605_RS32310
subclass of: SO_0000673
so part of: CHA6605_RS32310
location: complement(9780..10205)
location: region:9780-10205:-1
so has part: feature:9780-10205:-1:exon

WP_015162893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9780-10205:-1:exon

CHA6605_RS31005
type: Gene
subclass of: SO_0000704
RO_0002162: 1173020
locus tag: CHA6605_RS31005
old locus tag: Cha6605_6427
so part of: sequence
location: 10850..11260
location: region:10850-11260:1
so has part: feature:10850-11260:1:exon
subclass of: SO_0000010

position:10850:1
position: 10850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11260:1
position: 11260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10850-11260:1:exon

CHA6605_RS31005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1173020
locus tag: CHA6605_RS31005
old locus tag: Cha6605_6427
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: MobB mobilization protein
translation: MPIAPIGAAGMGGDGFPPDRNHFSRAFSTSFNNMTFKRTQAEPLSCQCNIRLTPSEMEELKDAASVAGITVSTYIRQRALGRRVAANTDMTTIRELRRIGGLLKHIHNESGGAYSQLTADTLIEIQKAIVSIGNGL
SIO_010081: CHA6605_RS31005
subclass of: SO_0000673
so part of: CHA6605_RS31005
location: 10850..11260
location: region:10850-11260:1
so has part: feature:10850-11260:1:exon

WP_232432357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10850-11260:1:exon

CHA6605_RS31015
type: Gene
subclass of: SO_0000704
RO_0002162: 1173020
locus tag: CHA6605_RS31015
old locus tag: Cha6605_6428
so part of: sequence
location: 11460..12788
location: region:11460-12788:1
so has part: feature:11460-12788:1:exon
subclass of: SO_0000010

position:11460:1
position: 11460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12788:1
position: 12788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11460-12788:1:exon

CHA6605_RS31015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1173020
locus tag: CHA6605_RS31015
old locus tag: Cha6605_6428
inference: COORDINATES: protein motif:HMM:NF015397.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MIGKRVKATATKSGGKHAGSLVDYITKDKDKHKVMQIGGKNFISDRLVGQRLEMMALAGENPRSKNPLNHYVLSWREQERPTPDQIDSAVDILLAEMEMQEHQVIYAAHQDTHNIHVHVVINRIHPDTIQPIQINRGFDIEALHRAVAKIEYVQGWQPLENAKYQIDEDGKIVERQDYQQQQPQPKQRAADFENRTGEKSAQRIGIETLAPIVKAANDWQQLHQQLAQAGAKYEQKGTGAIVTIGETVIKASSIDRAASFSNLQKRLGTYEPPIQDLDIAPISPQPLMEQMPPGWQQYTQLRSDYYTNKTADADALRQKWDERFQQLAELQTQERERLLAGQWQGKGAILNALRHSLAEDQKEEKQKLQQEQEAERERLREKYQQFPSFEEWQRLRGREDLAERWRYRHGEESPNLERIEVRQQQEREVERVSQDYGMSMGM
SIO_010081: CHA6605_RS31015
subclass of: SO_0000673
so part of: CHA6605_RS31015
location: 11460..12788
location: region:11460-12788:1
so has part: feature:11460-12788:1:exon

WP_015162895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11460-12788:1:exon

CHA6605_RS35330
type: Gene
subclass of: SO_0000704
RO_0002162: 1173020
locus tag: CHA6605_RS35330
so part of: sequence
location: complement(12764..12934)
location: region:12764-12934:-1
so has part: feature:12764-12934:-1:exon
subclass of: SO_0000010

position:12764:-1
position: 12764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12934:-1
position: 12934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12764-12934:-1:exon

CHA6605_RS35330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1173020
locus tag: CHA6605_RS35330
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKKENLPLKLKSLPTVNLNPRSDCLPTALAHASNLQRSGKHSLAGFPHHIPILIP
SIO_010081: CHA6605_RS35330
subclass of: SO_0000673
so part of: CHA6605_RS35330
location: complement(12764..12934)
location: region:12764-12934:-1
so has part: feature:12764-12934:-1:exon

WP_198288613.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12764-12934:-1:exon

CHA6605_RS32315
type: Gene
subclass of: SO_0000704
RO_0002162: 1173020
locus tag: CHA6605_RS32315
old locus tag: Cha6605_6429
so part of: sequence
location: 13054..14808
location: region:13054-14808:1
so has part: feature:13054-14808:1:exon
subclass of: SO_0000010

position:13054:1
position: 13054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14808:1
position: 14808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13054-14808:1:exon

CHA6605_RS32315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1173020
locus tag: CHA6605_RS32315
old locus tag: Cha6605_6429
inference: COORDINATES: protein motif:HMM:NF015722.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SUMF1/EgtB/PvdO family nonheme iron enzyme
translation: MKISRQSIKKIGDVLNKATSKFRKDDSLIKIGDVFDNQYEVDGIEDHKLTWICRVFDIKDPTKKYIAKRWKNLVEDRELIEREIRIISLIADPNTGVIPQLVRPSNQYGWIIYEYIDGKQLVEEVNANVRYDSKKAINLIIELCDLLKPIHQRGIVHRRIDLKHIIRRTQDRKLFIVDFSESQRIDIDTEIEPYERIATDFTPPQLNSTTPKFDEDIYSIGIIALLSLTRFNSLSSLVNEEEVDGALAWAKHANEADIGLIKVVSQMIDKSSRIRYQNIEEVLDAINNIEIELQPKSNPTIQIPTIEPDVKLPSNHLQLSTIQSSTKHSQLSTIQSQNIEPEIKLPSKHSQPSSYVSTKFLPTMVTIESGSFMMGSAEKRSERPAHQVSIATFQMSATPITQAQWKYVMESDLNPSHHQGDNYPVESITWLEAREFCKKLSSLSQDGKVYRLPSESEWEYACKANTNTMFYFGDDLDSLQANFANNEGTSTEVKRFKANHFGLYDMHGNVWEWCEDSYVTGYKDAPIDGSAVTKTEETNNDEKVVRGGAWNTNKFSCSSTSRYSIQKNESNNNCGFRVVTDIQK
SIO_010081: CHA6605_RS32315
subclass of: SO_0000673
so part of: CHA6605_RS32315
location: 13054..14808
location: region:13054-14808:1
so has part: feature:13054-14808:1:exon

WP_015162896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13054-14808:1:exon

CHA6605_RS31025
type: Gene
subclass of: SO_0000704
RO_0002162: 1173020
locus tag: CHA6605_RS31025
old locus tag: Cha6605_6430
so part of: sequence
location: 14855..17719
location: region:14855-17719:1
so has part: feature:14855-17719:1:exon
subclass of: SO_0000010

position:14855:1
position: 14855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17719:1
position: 17719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14855-17719:1:exon

CHA6605_RS31025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1173020
locus tag: CHA6605_RS31025
old locus tag: Cha6605_6430
inference: COORDINATES: protein motif:HMM:NF013100.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transglycosylase domain-containing protein
translation: MKNQSSNPYIQIKYHDNNGIPFDEPEFINGNIKSISAERKTGVIYIPSPILNEQYISIEKSNRIGIVDLLVEIIFGKYVTRKFLSPLLSLMLRHTGYKIVRSQSCSKDLSLKYNFAYYYFFKIKIISIISILRWIRAKLIKEGNIERQEIYHGDVFVIKRSGYSHNVKLTFHDRAPQYLSTKLRSLGSLSIKLISLLLIIIFSIIAWGAFSIDVSNLPDTRKPMEIQYAQDPQSDKVDILYRRSPDKKREEFSSHLINALIAKEDSRFYFSPGVDLLSFKNIGSRGGSGLTQQVARKLFAKELGFNKEQDIKNSGNRNELKLESDRLSFIRKLLEVGVSLKLDLMYSKQNILLTYLNRVSSSWEADEDKNSTNFEDRSKKYFDKSVDRLDSGESAMLVGMLTNPTVQDPCNQISAKRFIKIKINNLEEKIRENKKDLENATDENKQELQTLQKNRFYDELRLENLYNLERSGKITSEQIEEFKQYKVDPERYALIIRLVKEKEARLQFSQSELERKENLIETLKQGGLKSRQEGINLIDRVRGFFVKKHNEGLINKIKTEIDEINIKIETIRNEIDEIYQNIDVTKIRNYVTKVAKDNLQTYLDLEYDKVREFEISERAKDTREVVLNEMRKAGRINKGEYTQAMATGIRLKDPNLLCNAKSNLHELQVEYFSEAVNDELKLLERKNIIGAGLLKNKNYSIQTSIDRNMQEKAEEALQAYITTVGKKKNFDQGAILTLDTRNGSVKAMVGGYTDPNYQNLDPEDNQPINIYPGHGINHVTANNRQPGSIFKLFSYGAMMQDMHDRYKSSPALLLSKEYPCYVLKTGIKQCEHLAGQKKMNVFSAITYSENSVAIAAAKGLGIDKVKEFANTLGVGLSKPLNLKDIQGFVLGGGGNEVSLLEMTGAYAAVANGGTWNRPQIINSIKRLCQPEDTSWGFLYKPSKRGILSFMVLPN
SIO_010081: CHA6605_RS31025
subclass of: SO_0000673
so part of: CHA6605_RS31025
location: 14855..17719
location: region:14855-17719:1
so has part: feature:14855-17719:1:exon

WP_041550561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14855-17719:1:exon

CHA6605_RS31030
type: Gene
subclass of: SO_0000704
RO_0002162: 1173020
locus tag: CHA6605_RS31030
old locus tag: Cha6605_6431
so part of: sequence
location: complement(17700..18260)
location: region:17700-18260:-1
so has part: feature:17700-18260:-1:exon
subclass of: SO_0000010

position:17700:-1
position: 17700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18260:-1
position: 18260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17700-18260:-1:exon

CHA6605_RS31030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1173020
locus tag: CHA6605_RS31030
old locus tag: Cha6605_6431
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012305516.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MALVGYARVSSSGQSLDVQLQKLKHCDKIYQETQSGTNHQRSQLAACLEYVRDGDTLIVSRLDRLARSTLHLCTIADALQRKNVALQVLDQNIDTSDATGRLLFNMLAAIAEFETELRSERQLDGINKAKELGVKFGRSKRLSPQQVVELQLQRQQGVLIKILMKDFDLSKASVYRYLGKSSSEVP
SIO_010081: CHA6605_RS31030
subclass of: SO_0000673
so part of: CHA6605_RS31030
location: complement(17700..18260)
location: region:17700-18260:-1
so has part: feature:17700-18260:-1:exon

WP_015159321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17700-18260:-1:exon

CHA6605_RS31035
type: Gene
subclass of: SO_0000704
RO_0002162: 1173020
locus tag: CHA6605_RS31035
old locus tag: Cha6605_6432
pseudo: true
so part of: sequence
location: 18407..21479
location: region:18407-21479:1
so has part: feature:18407-21479:1:exon
subclass of: SO_0000010

position:18407:1
position: 18407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21479:1
position: 21479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18407-21479:1:exon

CHA6605_RS31035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1173020
locus tag: CHA6605_RS31035
old locus tag: Cha6605_6432
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015159244.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3 family transposase
SIO_010081: CHA6605_RS31035
subclass of: SO_0000673
so part of: CHA6605_RS31035
location: 18407..21479
location: region:18407-21479:1
so has part: feature:18407-21479:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18407-21479:1:exon

CHA6605_RS31040
type: Gene
subclass of: SO_0000704
RO_0002162: 1173020
locus tag: CHA6605_RS31040
so part of: sequence
location: 21508..21900
location: region:21508-21900:1
so has part: feature:21508-21900:1:exon
subclass of: SO_0000010

position:21508:1
position: 21508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21900:1
position: 21900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21508-21900:1:exon

CHA6605_RS31040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1173020
locus tag: CHA6605_RS31040
inference: COORDINATES: protein motif:HMM:NF013100.2
GO function: GO:0008658 - penicillin binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: penicillin-binding transpeptidase domain-containing protein
translation: MQKTPSCKKLNPFYEFNDDSTRTRKNVMSPEVAQALTKAFKNVVQEGTGKNAQISLEVAGKTGTTDENRNVWFIGFIPEKHVVTGIWLGNENQKPLGDSSKLAAKLWANYMGSIYGNKQQAPRTIAPSQT
SIO_010081: CHA6605_RS31040
subclass of: SO_0000673
so part of: CHA6605_RS31040
location: 21508..21900
location: region:21508-21900:1
so has part: feature:21508-21900:1:exon

WP_269744621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21508-21900:1:exon

CHA6605_RS32320
type: Gene
subclass of: SO_0000704
RO_0002162: 1173020
locus tag: CHA6605_RS32320
old locus tag: Cha6605_6433
so part of: sequence
location: 22090..22815
location: region:22090-22815:1
so has part: feature:22090-22815:1:exon
subclass of: SO_0000010

position:22090:1
position: 22090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22815:1
position: 22815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22090-22815:1:exon

CHA6605_RS32320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1173020
locus tag: CHA6605_RS32320
old locus tag: Cha6605_6433
inference: COORDINATES: protein motif:HMM:NF024909.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VWA domain-containing protein
translation: MVSTNSSKLNTPKSVYTKKRCPVIFLIDVSGSMLGNKNDSSPPIDRLNKALDTCIRKLRNDNETNDIAEVCIISFSQKISIVRDFTLCEDIETPILTASGTTPKFFEVIEEGINQLQSYLDRIEKEGSYKLCQPMIMFMTDGQPTLADGKNITDMEVLNNSCDEIRNKLQSVKTKNLSKLKPQLHAFSVGQASDNSNYILKRLAGEHNSYFLEGYNFDNLFDWISKSIEMASQGREVPNYN
SIO_010081: CHA6605_RS32320
subclass of: SO_0000673
so part of: CHA6605_RS32320
location: 22090..22815
location: region:22090-22815:1
so has part: feature:22090-22815:1:exon

WP_015162897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22090-22815:1:exon

CHA6605_RS31050
type: Gene
subclass of: SO_0000704
RO_0002162: 1173020
locus tag: CHA6605_RS31050
old locus tag: Cha6605_6434
so part of: sequence
location: 23016..23951
location: region:23016-23951:1
so has part: feature:23016-23951:1:exon
subclass of: SO_0000010

position:23016:1
position: 23016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23951:1
position: 23951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23016-23951:1:exon

CHA6605_RS31050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1173020
locus tag: CHA6605_RS31050
old locus tag: Cha6605_6434
inference: COORDINATES: protein motif:HMM:NF025053.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein phosphatase 2C domain-containing protein
translation: MNNFNIVKSINIGSRHQESNQSCQDHADYKFICENQILIAAVSDGLGSAEYSGDGSKLAVETAIIELEYQLKQHVNNLNNISGNEEQAKTIFTHVLKSVQERLRKRSRELIGNTRSNDRSYYRGKELDCTLLAVAIAKDFIIAIQIGDGMIVSHNFEANDYCILLDSTQDIVCGRTLTVMHPECIVKEVKLYYNKILSEQILENIHIIGANNMNSESSKRISKEIQIYTSNNVPSFICMATDGIEDFAFEGMCNSKYILYQPLFQSIDHLMKDNKQSDCQDFIDREIKSEEWQKCGTDDKTMLIISRPQSN
SIO_010081: CHA6605_RS31050
subclass of: SO_0000673
so part of: CHA6605_RS31050
location: 23016..23951
location: region:23016-23951:1
so has part: feature:23016-23951:1:exon

WP_015162898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23016-23951:1:exon

CHA6605_RS31055
type: Gene
subclass of: SO_0000704
RO_0002162: 1173020
locus tag: CHA6605_RS31055
old locus tag: Cha6605_6435
so part of: sequence
location: 23971..25848
location: region:23971-25848:1
so has part: feature:23971-25848:1:exon
subclass of: SO_0000010

position:23971:1
position: 23971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25848:1
position: 25848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23971-25848:1:exon

CHA6605_RS31055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1173020
locus tag: CHA6605_RS31055
old locus tag: Cha6605_6435
inference: COORDINATES: protein motif:HMM:NF012298.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTYTQNVQVKLDKSGETFSLLDKIGSGSEGEVWTLSKSQKLVKLYSQDYTCLHQRIDKIRYMVNNPLAEELLKDGDHINIAWPEELVKDAITGEYIGFAMSKIAGEVEKLSVICKSTKVFSNRDAFNHFSWLTQHIILENLTSLVNKIHDIEEYIIGDLQSRNILFNKNTFKISIVDVDSFVIKNSPYHDRQFVVPKYQAPELSEPNSQQTVYSDNFSLAHLIHEMLLFTEPFQDEDSCMADIYTSKWVFDPSIKKLPNENPFYILHENLQHCFLTAFHEGMEHPDRRPTANEWHEAIVLAIKDLEDCSHNLRHQYIKAKTCYWCESGEFDILSNDRSIYYTKTAWNSRLKFERQISGIDESIISIERQFSDCENKLISYVNQVQGNYENFSNFSEKYVFDDFSDFSEREIEKINKLLEFEKRVIFDLGDFEFIKSKLLNNRDIITNYKNAIDKLLSEYKNGNYQEICQYVERLKPLSTISLNTKNEIKNIILSRYSNASSVIEQIALEELYESIVRELNLIKIEPEPTPIANSGSGKIKSLTTPEARKKVPNRREDISYPSLIGEGIYNILLIIGVGVVVALPFVWVYFAFLSPRTDPGLDNNNKIVPKVTKVKNSQPASKKP
SIO_010081: CHA6605_RS31055
subclass of: SO_0000673
so part of: CHA6605_RS31055
location: 23971..25848
location: region:23971-25848:1
so has part: feature:23971-25848:1:exon

WP_015162899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23971-25848:1:exon

CHA6605_RS31060
type: Gene
subclass of: SO_0000704
RO_0002162: 1173020
locus tag: CHA6605_RS31060
old locus tag: Cha6605_6436
so part of: sequence
location: 26282..26587
location: region:26282-26587:1
so has part: feature:26282-26587:1:exon
subclass of: SO_0000010

position:26282:1
position: 26282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26587:1
position: 26587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26282-26587:1:exon

CHA6605_RS31060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1173020
locus tag: CHA6605_RS31060
old locus tag: Cha6605_6436
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSRKLPLFIGIIGSLVAVNTCFSAYVLNISAKGKVIENFIPAGWTLEDRTAGDLNGDSKDDLALRLVKSGEPGDRPQSLVILLNTKNGLTTPLRHKITMG
SIO_010081: CHA6605_RS31060
subclass of: SO_0000673
so part of: CHA6605_RS31060
location: 26282..26587
location: region:26282-26587:1
so has part: feature:26282-26587:1:exon

WP_015162900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26282-26587:1:exon

CHA6605_RS31065
type: Gene
subclass of: SO_0000704
RO_0002162: 1173020
locus tag: CHA6605_RS31065
old locus tag: Cha6605_6437
so part of: sequence
location: 26784..30164
location: region:26784-30164:1
so has part: feature:26784-30164:1:exon
subclass of: SO_0000010

position:26784:1
position: 26784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30164:1
position: 30164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26784-30164:1:exon

CHA6605_RS31065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1173020
locus tag: CHA6605_RS31065
old locus tag: Cha6605_6437
inference: COORDINATES: protein motif:HMM:NF024180.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CHAT domain-containing protein
translation: MEHIRDYNTLIRELLAGIAGGWSYGDVTGWLTSKSIKESELAQWFREQEVPLGTDADLRGQFEGLAGLGQGELAETAGQLIRSWESEIDDAETWFSRGYNLFGLGRYEEEIANYKQAIKIYPDYFQPWYYQGIALGYLGQTEESIASFERAIEIAPNFHAGWYGQGIELDNLGRFEDAVSNFNRAIEIEPNFYQAWFKRGFSLGNLNKFEEAVSNFNRAVEIEPNHSPSWHCRGLALGQIGRYEDAIYSFERAIEIDSDEPEIWRDRGFAQINLDRYEEAIFSYERYLNIQINDCNIWFLRGVLLKYIDKYEEAETSLDRAIQINPDFFEAWCERGLVCFFLARNQDSIASYDRAIELNADLHEAWFGKGLTLKTIGQYKNAIASYDRAIEIKPDYYEAWSNRGSALEAISKYKEAIANYDRAIEINPDFHLVWYNRGISLEHLGQYSEAIPNFERAIKLKPDDYQSLFRLGVALDNLGWYKEAIINLTLAIEIKPDFSDAWCSLGVVLENLGQYKEAIASYEQSIKLKPDNLYQVWANRGAAYGRFKGYQSQINAYYQALQEIQCNEHPDHWGFLYRDIGRRHYHEGNRDLENSEIYYNLALDGFYQILKTPACKKFPRLLLDVFIDISKVYLVQENVEAASHYHNQAFDIFTKLLNEKPTFEAKKYLQLEYYQLRRFDVDYFIIKNDPIRALEVAELDKNNCLTWLLSSLEENTISPKHAEMRQLLARSSATEQTAIIYWHYSPDTLTTFILTTGDIQPLIWKSHRATAAKQLEEWIEEWDKQYRNYGSKKDEGGKEDRSHHPWRINLAANLTQLQEILEIDGICAQLPSTLTHLILIPHGDLHRFPLHTLFLNSTKLLRLQSCTYLPSIQIGLNLQQRSTSTKSYTPLLSVEDPETHQDAMPFAQIESTIVRHLLQNHTHINSKSANLATVKNALKQPHASFHFTGHAAYNSRTPEASALSLTDEPLTAKQISQLNLSSYNLITLAACETAISGREKIDIEYVGLTSAFLQAGAANILSTLWQVDEIANAWFTIFFCQQLLAGKSPAVALTLTQRWMQSLTWRKLADWLAQLSQIPDLEIGIIDRLNARITNTLNAGGTIDLNQPTKYSHPYYWAAFTLTGEG
SIO_010081: CHA6605_RS31065
subclass of: SO_0000673
so part of: CHA6605_RS31065
location: 26784..30164
location: region:26784-30164:1
so has part: feature:26784-30164:1:exon

WP_015162901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26784-30164:1:exon

CHA6605_RS31070
type: Gene
subclass of: SO_0000704
RO_0002162: 1173020
locus tag: CHA6605_RS31070
old locus tag: Cha6605_6438
so part of: sequence
location: 30166..30702
location: region:30166-30702:1
so has part: feature:30166-30702:1:exon
subclass of: SO_0000010

position:30166:1
position: 30166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30702:1
position: 30702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30166-30702:1:exon

CHA6605_RS31070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1173020
locus tag: CHA6605_RS31070
old locus tag: Cha6605_6438
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFSKQIIDLEALLYALAQQTEPLPESLQQSLIEVGRSLHEDRPDTARELRALIQQYSPLELEYQRALTKWDENYTSQERAKTLDATFSIASGLDDLFIERVLPATNWVTATKKLANSSKYLKQRSQFLERGDRVVALASGGAFLGVLIAQIPGAVIGGVLAGVYAWLSFPTVVTGRK
SIO_010081: CHA6605_RS31070
subclass of: SO_0000673
so part of: CHA6605_RS31070
location: 30166..30702
location: region:30166-30702:1
so has part: feature:30166-30702:1:exon

WP_015162902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30166-30702:1:exon

CHA6605_RS31075
type: Gene
subclass of: SO_0000704
RO_0002162: 1173020
locus tag: CHA6605_RS31075
old locus tag: Cha6605_6439
so part of: sequence
location: 30707..31009
location: region:30707-31009:1
so has part: feature:30707-31009:1:exon
subclass of: SO_0000010

position:30707:1
position: 30707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31009:1
position: 31009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30707-31009:1:exon

CHA6605_RS31075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1173020
locus tag: CHA6605_RS31075
old locus tag: Cha6605_6439
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVQKYLIGIGFLLITSSAILIIIIRYRRNQKLNLTFQEAFDLALAIFSGMSGAYVIYQAINLLDTLLKLVGIEGIVAMCLGGLASIWFAFGKIKELIDKP
SIO_010081: CHA6605_RS31075
subclass of: SO_0000673
so part of: CHA6605_RS31075
location: 30707..31009
location: region:30707-31009:1
so has part: feature:30707-31009:1:exon

WP_015162903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30707-31009:1:exon