Helicobacter cinaedi PAGU611 plasmid pHci1, complete sequence.
type: Entry
definition: Helicobacter cinaedi PAGU611 plasmid pHci1, complete sequence.
sequence version: NC_017762.1
sequence date: 2022-12-30
sequence: sequence
division: CON
label: NC_017762.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00061064
keyword: RefSeq
source: Helicobacter cinaedi PAGU611
organism: Helicobacter cinaedi PAGU611
taxonomy: Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter.
reference: 1
references: 22740670
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAP012345.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Celera Assembler v. 5.3\nGenome Coverage :: 31x (454 GS FLX); 52x (Miseq)\nSequencing Technology :: 454 GS FLX; Illumina Miseq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/30/2022 01:17:44\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,207\nCDSs (total) :: 2,159\nGenes (coding) :: 2,117\nCDSs (with protein) :: 2,117\nGenes (RNA) :: 48\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 40\nncRNAs :: 2\nPseudo Genes (total) :: 42\nCDSs (without protein) :: 42\nPseudo Genes (ambiguous residues) :: 0 of 42\nPseudo Genes (frameshifted) :: 18 of 42\nPseudo Genes (incomplete) :: 28 of 42\nPseudo Genes (internal stop) :: 9 of 42\nPseudo Genes (multiple problems) :: 9 of 42\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 23054
topology: circular
so has quality: SO_0000988
location: 1..23054
location: region:1-23054:1
RO_0002162: 1172562

NC_017762
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00061064
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Helicobacter cinaedi strain PAGU611, isolated in a case of human bacteremia
author: Goto, T.
author: Ogura, Y.
author: Hirakawa, H.
author: Tomida, J.
author: Morita, Y.
author: Akaike, T.
author: Hayashi, T.
author: Kawamura, Y.
journal: J Bacteriol
volume: 194
issue: 14
pages: 3744-3745
year: 2012
pubmed: 22740670

22740670
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Hirakawa, H.
journal: Submitted (13-APR-2012) Contact:Hideki Hirakawa Kazusa DNA Research Institute, Department of Plant Genome Research; 2-6-7 Kazusakamatari, Kisarazu 292-0818, Japan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23054:1
position: 23054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-23054:1:source
so part of: sequence
organism: Helicobacter cinaedi PAGU611
mol type: genomic DNA
strain: PAGU611
plasmid: pHci1

1172562
type: Taxonomy
SIO_000068: taxonomy

HCN_RS11570
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS11570
so part of: sequence
location: 35..175
location: region:35-175:1
so has part: feature:35-175:1:exon
subclass of: SO_0000010

66540638
type: Gene
SIO_000068: ncbigene

position:35:1
position: 35
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175:1
position: 175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35-175:1:exon

HCN_RS11570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS11570
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKFAEIYNAQKNPMIKLTKPLKHNHAICPLVIESIPLDSGFALSVE
SIO_010081: HCN_RS11570
subclass of: SO_0000673
so part of: HCN_RS11570
location: 35..175
location: region:35-175:1
so has part: feature:35-175:1:exon

WP_162129471.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35-175:1:exon

HCN_RS10535
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS10535
old locus tag: HCN_p01
so part of: sequence
location: complement(186..1250)
location: region:186-1250:-1
so has part: feature:186-1250:-1:exon
subclass of: SO_0000010

66540509
type: Gene
SIO_000068: ncbigene

position:186:-1
position: 186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1250:-1
position: 1250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186-1250:-1:exon

HCN_RS10535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS10535
old locus tag: HCN_p01
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002957548.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIKCNLLTAQDIDNLNKDSETIYLKALYQCESSIYFDDDNLLYGNNTREFYNYKSSFYLSFLSNKDSITDEYLEARKNLYHSRQTIKQEQAQELEYQISDIVSHSINTHKGNRISSNNLILESQDKSIQIIFLDTSRSLSHLLHIHNNKIDIFTKDKTYLDIQELESLLQEYVNTNTESNNTKQDSPISLDILNSPSTQIFFYSTLLTGSSEIQSNPFFFGQLDKDNTIKQDTPTYHFSPKDEENNLGTLTIFLNSCTLTLLNYSLLDSTLNIKLTLTNKESKAKQQQAKAKTKQQTQPEQLKPLSTAMLHPLLEDDEIKCPHNGVVQLQSNKGKSITDKNIPFILETIKRQVA
SIO_010081: HCN_RS10535
subclass of: SO_0000673
so part of: HCN_RS10535
location: complement(186..1250)
location: region:186-1250:-1
so has part: feature:186-1250:-1:exon

WP_014667635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186-1250:-1:exon

HCN_RS10540
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS10540
old locus tag: HCN_p02
so part of: sequence
location: complement(1247..1918)
location: region:1247-1918:-1
so has part: feature:1247-1918:-1:exon
subclass of: SO_0000010

66540510
type: Gene
SIO_000068: ncbigene

position:1247:-1
position: 1247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1918:-1
position: 1918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1247-1918:-1:exon

HCN_RS10540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS10540
old locus tag: HCN_p02
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEILRPLQSNPKKLKHIVKPFRFILTRVSNQLLAVDALIEYQKTGDGLKVVLKVGATIVADRIFQIGVVASAGIAITAFIATAIASVSIVGAVVVGIAIFIGGVAISWWISKQVEKLVNYVGGFMIDYIREADFYFTEQEMQQLSVAHCHKTTQRIMQRFSGNYNHKETFINGVDMTDKLYPNPYILSDKAIIPRGFSNTWRNLTTKQLKELNDTIKISEEIK
SIO_010081: HCN_RS10540
subclass of: SO_0000673
so part of: HCN_RS10540
location: complement(1247..1918)
location: region:1247-1918:-1
so has part: feature:1247-1918:-1:exon

WP_232501887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1247-1918:-1:exon

HCN_RS12280
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS12280
old locus tag: HCN_p03
so part of: sequence
location: complement(1854..2168)
location: region:1854-2168:-1
so has part: feature:1854-2168:-1:exon
subclass of: SO_0000010

69102611
type: Gene
SIO_000068: ncbigene

position:1854:-1
position: 1854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2168:-1
position: 2168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1854-2168:-1:exon

HCN_RS12280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS12280
old locus tag: HCN_p03
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDKIEIIIKPENEVDKQEVETLIRVLKKADIADNAIVMLKEMEQEQDEAKIKALQEKSQEKKEQDDPFHQKDIQSFKDKVDSFGNLTTIAEQSEKTQTHSKTL
SIO_010081: HCN_RS12280
subclass of: SO_0000673
so part of: HCN_RS12280
location: complement(1854..2168)
location: region:1854-2168:-1
so has part: feature:1854-2168:-1:exon

WP_014667637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1854-2168:-1:exon

HCN_RS12285
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS12285
old locus tag: HCN_p04
so part of: sequence
location: complement(2165..3034)
location: region:2165-3034:-1
so has part: feature:2165-3034:-1:exon
subclass of: SO_0000010

69102612
type: Gene
SIO_000068: ncbigene

position:2165:-1
position: 2165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3034:-1
position: 3034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2165-3034:-1:exon

HCN_RS12285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS12285
old locus tag: HCN_p04
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQTKFNGNYIKRISFYVGIIAFIAYLVISLVMWIMDINKEVDNIVNNAKAELAPFIEWYEKDSARELESIQNLTQESLNALNINATIHQNLQDIQKAIDNTEILSNFILPYDDENGALQTIVDVGRMIKTKLFIIADLLSKERDFNPNQTYFILHDKERTQDYQNFLDFLESCISNDFSNPKKLEKASLDKLGIYYAGMAIFYNAFNSLFLSDIESNTCDVNRQDIQRAIQRFNTSKSHFKTISAQLDKYTAKSDKAKGFKVEVEKVIQKNSQDEKVISTIQSNLKVCK
SIO_010081: HCN_RS12285
subclass of: SO_0000673
so part of: HCN_RS12285
location: complement(2165..3034)
location: region:2165-3034:-1
so has part: feature:2165-3034:-1:exon

WP_014667638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2165-3034:-1:exon

HCN_RS10550
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS10550
old locus tag: HCN_p05
so part of: sequence
location: complement(3078..3395)
location: region:3078-3395:-1
so has part: feature:3078-3395:-1:exon
subclass of: SO_0000010

66540511
type: Gene
SIO_000068: ncbigene

position:3078:-1
position: 3078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3395:-1
position: 3395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3078-3395:-1:exon

HCN_RS10550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS10550
old locus tag: HCN_p05
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014667639.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSIPQYLPKLFKEPYKDYEHKDYGIGQYKPLLNYSKDIKEYRESTHSKDTSLQSISITHTRVFLSPFKANKLHFTFALGLDDYLDKDNTTELKIIIGGVYDEGGC
SIO_010081: HCN_RS10550
subclass of: SO_0000673
so part of: HCN_RS10550
location: complement(3078..3395)
location: region:3078-3395:-1
so has part: feature:3078-3395:-1:exon

WP_014667639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3078-3395:-1:exon

HCN_RS10555
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS10555
old locus tag: HCN_p06
so part of: sequence
location: complement(3392..3808)
location: region:3392-3808:-1
so has part: feature:3392-3808:-1:exon
subclass of: SO_0000010

66540512
type: Gene
SIO_000068: ncbigene

position:3392:-1
position: 3392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3808:-1
position: 3808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3392-3808:-1:exon

HCN_RS10555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS10555
old locus tag: HCN_p06
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014667640.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKIKIIILFMFVLCVTFSSAIEAITILKKADNLPYSYEKKVSMLKKLGFEYCVEQDKFSENSFWFFHITHKLQLRNNNHSFFYIENNDGFMQFKNFIKAHTQSNFMPRFYTCLDLYDSKEYQAEVERIVKKYCKDCQ
SIO_010081: HCN_RS10555
subclass of: SO_0000673
so part of: HCN_RS10555
location: complement(3392..3808)
location: region:3392-3808:-1
so has part: feature:3392-3808:-1:exon

WP_014667640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3392-3808:-1:exon

HCN_RS10560
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS10560
old locus tag: HCN_p07
so part of: sequence
location: complement(3811..4611)
location: region:3811-4611:-1
so has part: feature:3811-4611:-1:exon
subclass of: SO_0000010

66540513
type: Gene
SIO_000068: ncbigene

position:3811:-1
position: 3811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4611:-1
position: 4611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3811-4611:-1:exon

HCN_RS10560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS10560
old locus tag: HCN_p07
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015453692.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VI secretion system amidase effector protein Tae4
translation: MGITITATCEGKSKSIECRRPSFKEVRKEYDKINTANPNDENLQEAFRQGIVDNGIWRGKTEKISKNTAENIIQSIKDGQYDDNVWQRYALVGGKPLSEYINYKDFFRFGYVYQDYSNTCAMQVSYALNYGGMPLHTEIKAKEYNSMYGRGEKYLYILGADYIGRYLNDKWGKAEVAIEPKSNDERKLTFNNLQGNTGIAVIKGRHFINQKFSSNFSHTTLWNTNDFVDVQNKTNYNYLLELIWNDSFGNTHIYHSSNFQFWELKD
SIO_010081: HCN_RS10560
subclass of: SO_0000673
so part of: HCN_RS10560
location: complement(3811..4611)
location: region:3811-4611:-1
so has part: feature:3811-4611:-1:exon

WP_014667641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3811-4611:-1:exon

HCN_RS10565
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS10565
old locus tag: HCN_p08
so part of: sequence
location: complement(4613..5242)
location: region:4613-5242:-1
so has part: feature:4613-5242:-1:exon
subclass of: SO_0000010

66540514
type: Gene
SIO_000068: ncbigene

position:4613:-1
position: 4613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5242:-1
position: 5242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4613-5242:-1:exon

HCN_RS10565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS10565
old locus tag: HCN_p08
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015453693.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSIPQYLPKLFKEPYKDYEHKDYGIGQYKPLLNYSKDIKEYRESTHSKDTSLQSISITHTRVFLSPFKANKLHFTFALGLDDYLDKDNTTELKIIIGGVYDEGEIESDLVATLASNDDRLEYEALEDTKEEKQITEIYFSYGEDKIKLKDISRHSQDINLHIRTQGYEEGEIIKVKLESSTNQTFIVRGRIQNNEAFIMNVLKEIEEER
SIO_010081: HCN_RS10565
subclass of: SO_0000673
so part of: HCN_RS10565
location: complement(4613..5242)
location: region:4613-5242:-1
so has part: feature:4613-5242:-1:exon

WP_041309719.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4613-5242:-1:exon

HCN_RS10570
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS10570
old locus tag: HCN_p09
so part of: sequence
location: complement(5239..5697)
location: region:5239-5697:-1
so has part: feature:5239-5697:-1:exon
subclass of: SO_0000010

66540515
type: Gene
SIO_000068: ncbigene

position:5239:-1
position: 5239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5697:-1
position: 5697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5239-5697:-1:exon

HCN_RS10570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS10570
old locus tag: HCN_p09
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015453694.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKLCLFLFLCISSVYADSNTECLGVDFLSSRPLKKADSEFHYFAKSRMIKTAKEFGVGICLDYYGLSQKIEIMEMQWFDIFFQQIEQVGNTDSGRCYTTNKRKQLQEEIKTYVLSQPQGISKIRTCLELYDSKEYQAEVERIVKKYCKDCQ
SIO_010081: HCN_RS10570
subclass of: SO_0000673
so part of: HCN_RS10570
location: complement(5239..5697)
location: region:5239-5697:-1
so has part: feature:5239-5697:-1:exon

WP_014667643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5239-5697:-1:exon

HCN_RS10575
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS10575
old locus tag: HCN_p10
so part of: sequence
location: complement(5714..5983)
location: region:5714-5983:-1
so has part: feature:5714-5983:-1:exon
subclass of: SO_0000010

66540516
type: Gene
SIO_000068: ncbigene

position:5714:-1
position: 5714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5983:-1
position: 5983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5714-5983:-1:exon

HCN_RS10575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS10575
old locus tag: HCN_p10
inference: COORDINATES: protein motif:HMM:NF025478.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: T6SS effector amidase Tae4 family protein
translation: MRDFLYVKWGFEKPYNPKEMYSKNDNIAFRQELQNFKKNGIVVMQVSGWGNAGGHTTLWNGKGFLDETNYLDYYKEAIFVRELCFWELL
SIO_010081: HCN_RS10575
subclass of: SO_0000673
so part of: HCN_RS10575
location: complement(5714..5983)
location: region:5714-5983:-1
so has part: feature:5714-5983:-1:exon

WP_081495252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5714-5983:-1:exon

HCN_RS10580
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS10580
old locus tag: HCN_p11
so part of: sequence
location: complement(6007..6447)
location: region:6007-6447:-1
so has part: feature:6007-6447:-1:exon
subclass of: SO_0000010

66540517
type: Gene
SIO_000068: ncbigene

position:6007:-1
position: 6007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6447:-1
position: 6447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6007-6447:-1:exon

HCN_RS10580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS10580
old locus tag: HCN_p11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002957538.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRQYVLIALLLFFCACSVDKPITLYAINMMYACECPRYRVFRVEDTESRLTDGEIDLDKNANLSNEIWHVMNLEVPQNLIGVDLELEFESAEKEREFSKNEGVSPICNIYYFNGTLHQGLFGKATLYVKDYTIMPKSKNCISQIIE
SIO_010081: HCN_RS10580
subclass of: SO_0000673
so part of: HCN_RS10580
location: complement(6007..6447)
location: region:6007-6447:-1
so has part: feature:6007-6447:-1:exon

WP_002957538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6007-6447:-1:exon

HCN_RS10585
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS10585
old locus tag: HCN_p12
so part of: sequence
location: complement(6444..7829)
location: region:6444-7829:-1
so has part: feature:6444-7829:-1:exon
subclass of: SO_0000010

66540518
type: Gene
SIO_000068: ncbigene

position:6444:-1
position: 6444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7829:-1
position: 7829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6444-7829:-1:exon

HCN_RS10585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS10585
old locus tag: HCN_p12
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSYQFHMTLIESHNDTPLDSLSIDIAKDTKELSDTNNLSSNLQDVLSSIYVSLKQTYTKGYKYHYLSLQLDSNVLILILLIPQKIPKIYKEAYKEYQDKEYGVGRYTYLYEYCYHKDLDIKDYAKIGLDSNPSNATILTLHTAYKAQKLEVTLANGLDSILESRDRQRQAKLDRKSQNSTKQQSIDFLLTITLINGGYKGKLWGFRENSEDGITILNPKKDFMGAETIRTSIQKSTPQRNKQVHLLFYGGARKIGDNAAFYYASINVLKDYKHYYPNDIFIHEFVDSAKTIVDKINEQNIESIASLDLFFHGSKWGLYMYKGASMYKELLSEDIKENKLNASLYASKTADLLTAWDTHEEKRTIYDVKFDRFISKGAIIEIHGCESGGDIYVIDSISKNLSEEIPQGYVVGHTTKTNPNIDNTQDNAKQDYRHGVRAIWQNGKVIKKTTQKRWINFNKEMI
SIO_010081: HCN_RS10585
subclass of: SO_0000673
so part of: HCN_RS10585
location: complement(6444..7829)
location: region:6444-7829:-1
so has part: feature:6444-7829:-1:exon

WP_232501888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6444-7829:-1:exon

HCN_RS10590
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS10590
old locus tag: HCN_p13
so part of: sequence
location: complement(7838..8266)
location: region:7838-8266:-1
so has part: feature:7838-8266:-1:exon
subclass of: SO_0000010

66540519
type: Gene
SIO_000068: ncbigene

position:7838:-1
position: 7838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8266:-1
position: 8266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7838-8266:-1:exon

HCN_RS10590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS10590
old locus tag: HCN_p13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005219845.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYIVICFLGISFGLAFCLDETKAYAGKQMSAENEFSKEPTTYYVRWALMYCLGYVSNENKMYQMPKCKARKETKNPHHIDNMVQLFGNQAFKEIKAYIDKNLEYETFDKGRVNTCFEKIYYNNEIQEKFKAIVEKHRNEKK
SIO_010081: HCN_RS10590
subclass of: SO_0000673
so part of: HCN_RS10590
location: complement(7838..8266)
location: region:7838-8266:-1
so has part: feature:7838-8266:-1:exon

WP_005219845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7838-8266:-1:exon

HCN_RS11765
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS11765
old locus tag: HCN_p14
so part of: sequence
location: complement(8263..10818)
location: region:8263-10818:-1
so has part: feature:8263-10818:-1:exon
subclass of: SO_0000010

66540669
type: Gene
SIO_000068: ncbigene

position:8263:-1
position: 8263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10818:-1
position: 10818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8263-10818:-1:exon

HCN_RS11765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS11765
old locus tag: HCN_p14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004085365.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: T6SS effector amidase Tae4 family protein
translation: MLENSFYISIHKEKQIVHINRINNNTTLDCKTIHNIIFENLQENEAYRDISLQDVYSYEVYVFLESILLAGGDESKSLGYECFFGTLDSKSLESNNLDSKDNNLGLDTLKPIYHLQASDEIIESTSNNRDSSNADSNNSLSTLDIFLNGSRLTLLNYSLLDSSLNIKLECNSSESKAIQEREKAQRDKDSSPVASNDKSQSTSMLHPILEDTEIKCPHNGVVKLKSNKGKPFKSKGIPMILESDLINSHIIGCTNNIAGVPTPCTLISVILPSARAFKKYNDDYPIMQDLVSGNVFSDKGFPLIATPKPNTFRINSPKPIDSNTQNKQKLEPQIKLYKPALRLHYKITPLQKDNLPIYRLKLNDSIIESNNDTPLDSITIDIAKDTKDLHDIHNLDKALQDILSILHSNLKQSFMKEYMYKYVSLQLDSNMLLLILLIPQKIPKIYKEAYKEYQDKEYGVGRYTYVYEYCYHKDLDIKDYAKIGLDSNPSNATILTLHTAYKAQKLEVTLANGLDSIIESRDRQRQAKLARESKESKNSQQDKRHNTDITSSHIESQTIESKQKDSKHNTKQIIDSLLTLKLINGGYKDKLWSYGEEVEEEIEEKIDISQGILIASNDDAIAYQALEEMNKKEKWKQLKTSYLAIHNIAQTDIKMSRQRIGEKRLWDWIHSEDNYLEYGENEFIKAEIRYYKIGGPIYDVFLNTPHQYINTCAARISKALTDFGIVIKKLQGMKNNAYVANAGTNTKPYKILVRVEDMIDFLKLNDSLGEPIVFRPKVNQTSDAFCKEVLSSLNANGIIAMIITFRDAGGHVTLWDNDKGEFLDNVDNSDGVNYMNGRYNIREVYFWEIAR
SIO_010081: HCN_RS11765
subclass of: SO_0000673
so part of: HCN_RS11765
location: complement(8263..10818)
location: region:8263-10818:-1
so has part: feature:8263-10818:-1:exon

WP_014667646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8263-10818:-1:exon

HCN_RS10800
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS10800
old locus tag: HCN_p15
so part of: sequence
location: complement(10829..12694)
location: region:10829-12694:-1
so has part: feature:10829-12694:-1:exon
subclass of: SO_0000010

66540547
type: Gene
SIO_000068: ncbigene

position:10829:-1
position: 10829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12694:-1
position: 12694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10829-12694:-1:exon

HCN_RS10800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS10800
old locus tag: HCN_p15
inference: COORDINATES: protein motif:HMM:NF022635.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2974 domain-containing protein
translation: MTNKEMITRFKDMADIADASYAMLHYVFENIDSVFKSKKWEEADNITNRDKTIENDKYLNGNIILPNSNTAYARAIESRFQKDIVIEKGTFVDDKLGDSPKMVSVARELSQRTKNFVNRYELIEHQPNADYGFSATLFKDTKADSKDSEYILAIRGTEITLEDLSIDITLARNGIPMQCYELARFYEEQIKKHLDYKQKLIIVGHSLGGYLAQSFCFMYPDRVAELYTFNSPGLLGAWNKDFIDDLLSSFEIATYAVGGAGIARKIGFKLLTKSPTTLKVMAVLGLLSLTINIKYATWIPKELQKYSGIIKYLIKNIKDSESREGKYMPYPLDKNNHYHIEATNLLDFEKHMSDTTFYVNLIQHLGTDIAGNYYPIYLGNELSNSHFLAPMLNVLYFYSYLLELDSNYDKVKDKSLSECIEYCNKFMNDIKIHLETFVITTNKNNKRSFEIKNGPFTLFRDSPKEMDFLEIFLSRVAVIIGKSNQELSMQGKSYYTSSMQPTIPKESIIDFVTTLSNDGYYMSILDKEYFAEIRKKCDDINNINNVGYKACLAEYRNFIIINKNNQIIENKDNLGSIYGYNSSVYRAVHNKWCETSLGSHCKIIQGLYYGGKATMIAVKGA
SIO_010081: HCN_RS10800
subclass of: SO_0000673
so part of: HCN_RS10800
location: complement(10829..12694)
location: region:10829-12694:-1
so has part: feature:10829-12694:-1:exon

WP_014667647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10829-12694:-1:exon

HCN_RS10610
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS10610
old locus tag: HCN_p16
so part of: sequence
location: complement(12684..13181)
location: region:12684-13181:-1
so has part: feature:12684-13181:-1:exon
subclass of: SO_0000010

66540520
type: Gene
SIO_000068: ncbigene

position:12684:-1
position: 12684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13181:-1
position: 13181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12684-13181:-1:exon

HCN_RS10610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS10610
old locus tag: HCN_p16
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRMIYAIFGILVVIPIVILVFSGGNTQFLDPQYYKLRKLENDTSGLYVLDEELDREARRIGVGKILQNGYKVIYEYEADIDKIDSRIKSGKHLIYSYIDGNGQKNTISYYLCYKYYTYGLWLIGDEGAGFRFKGGDESVWLCNRDNVFYYDKETDTFIKKDKNDK
SIO_010081: HCN_RS10610
subclass of: SO_0000673
so part of: HCN_RS10610
location: complement(12684..13181)
location: region:12684-13181:-1
so has part: feature:12684-13181:-1:exon

WP_014667648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12684-13181:-1:exon

HCN_RS12470
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS12470
so part of: sequence
location: complement(13178..13309)
location: region:13178-13309:-1
so has part: feature:13178-13309:-1:exon
subclass of: SO_0000010

77383560
type: Gene
SIO_000068: ncbigene

position:13178:-1
position: 13178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13309:-1
position: 13309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13178-13309:-1:exon

HCN_RS12470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS12470
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNSNKEMINKFKDYADCADASYAKLHYVYENIDSIFESRKCV
SIO_010081: HCN_RS12470
subclass of: SO_0000673
so part of: HCN_RS12470
location: complement(13178..13309)
location: region:13178-13309:-1
so has part: feature:13178-13309:-1:exon

WP_023947345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13178-13309:-1:exon

HCN_RS10615
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS10615
old locus tag: HCN_p17
so part of: sequence
location: complement(13306..13806)
location: region:13306-13806:-1
so has part: feature:13306-13806:-1:exon
subclass of: SO_0000010

66540521
type: Gene
SIO_000068: ncbigene

position:13306:-1
position: 13306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13806:-1
position: 13806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13306-13806:-1:exon

HCN_RS10615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS10615
old locus tag: HCN_p17
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNVIKKYLTLKKVLVFFAVAFLVLFCAANFSTAFMDWQYYKAKYINNKCSGIYIYDKDLYEEAKEYGDKIAILSNGFPIKRETLEVNTQYGRIWILGKNIFYIDDSGNKHTIYQIREYIQRYFRIYLSGDEAAGLRLNTRDFHWFQSKNHTFYIEEYNNTLKGICE
SIO_010081: HCN_RS10615
subclass of: SO_0000673
so part of: HCN_RS10615
location: complement(13306..13806)
location: region:13306-13806:-1
so has part: feature:13306-13806:-1:exon

WP_014667649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13306-13806:-1:exon

HCN_RS10620
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS10620
old locus tag: HCN_p18
so part of: sequence
location: complement(13901..14398)
location: region:13901-14398:-1
so has part: feature:13901-14398:-1:exon
subclass of: SO_0000010

66540522
type: Gene
SIO_000068: ncbigene

position:13901:-1
position: 13901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14398:-1
position: 14398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13901-14398:-1:exon

HCN_RS10620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS10620
old locus tag: HCN_p18
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKESIILKLKQTFTIKRILISLISLFFIGGCSTIFIDPRSYIAWFYLCKNDKQILYDKNLYDKLEIQDSYKGVEPIREITDLQSLFATKIKTKAISQKKILGVRRTEYEWYIDNTLVSKGIGYDMTFYRVKFQGDEASGWNWNIQKSNAWCKTKRYFIDISKEN
SIO_010081: HCN_RS10620
subclass of: SO_0000673
so part of: HCN_RS10620
location: complement(13901..14398)
location: region:13901-14398:-1
so has part: feature:13901-14398:-1:exon

WP_014667650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13901-14398:-1:exon

HCN_RS11160
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS11160
old locus tag: HCN_p19
so part of: sequence
location: complement(14399..15106)
location: region:14399-15106:-1
so has part: feature:14399-15106:-1:exon
subclass of: SO_0000010

66540584
type: Gene
SIO_000068: ncbigene

position:14399:-1
position: 14399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15106:-1
position: 15106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14399-15106:-1:exon

HCN_RS11160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS11160
old locus tag: HCN_p19
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTHTDIQEIQPIDTRFAINLSTKTPPTKHTEQQHRQALQQKDQDSKTQDSIQSTAMLHPILEDTEIKCPHNGVVKLKSNKGKPFKSKGIPMILESDLINSHIIGCTNNIAGVPTPCTLISVILPSARAFKKYNDDYPIMQDLVSSGVMSDKGFPLICTPKENTFRINSPNPSNANTQSKEALLATIKLTKPLLRLYYKINTKQKDNLPIYRIKCNGGISKYIVESYTIKIKEMA
SIO_010081: HCN_RS11160
subclass of: SO_0000673
so part of: HCN_RS11160
location: complement(14399..15106)
location: region:14399-15106:-1
so has part: feature:14399-15106:-1:exon

WP_014667651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14399-15106:-1:exon

HCN_RS10630
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS10630
old locus tag: HCN_p21
so part of: sequence
location: complement(15322..16842)
location: region:15322-16842:-1
so has part: feature:15322-16842:-1:exon
subclass of: SO_0000010

66540523
type: Gene
SIO_000068: ncbigene

position:15322:-1
position: 15322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16842:-1
position: 16842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15322-16842:-1:exon

HCN_RS10630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS10630
old locus tag: HCN_p21
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002957543.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAENNKDFTDHLSDFGEGIASFWVAAYNFGDFLSRISGLRDWQHGSIVIKDYHQQEAIEEVKLFWKGIRTFLNNEETRMAAKEMLIQDFKERPLYYIGSFAITSGISSTIKAGNKVTAKIQSQPLRIIAEQSINAVPRTLFASTIFSTKALNTIHEFYPSFKTLQNNICSLYSNDKNYTNLFNQDMIMCSFSQNENPESKTQSLQQEMQRLYHNIQKTNTEFNAYKPIPIISFTNPKVAYIQKLNPKDIHSLTPNSPLHLLKALFFCENYILLDSNKEPLLRESNWREFYNYKSDFYTIFIADKQALTQDYINERISLYNAIMQIRKQIQDKEIQELQKQQQELEQQLQGLDSKERESKLQEYQREQERKQRDKERQAQRQVRFSKGNTTSTTQNLTNAYTANTTQNLNTNNNAYITKDSYLILESNDRDTKIIFLDSLKDSHIRTFSNPQANANTSTNSLDSNNSYLANTSLSFANLIFQHNNKVSIFARDNSIIDYCLEVVKRI
SIO_010081: HCN_RS10630
subclass of: SO_0000673
so part of: HCN_RS10630
location: complement(15322..16842)
location: region:15322-16842:-1
so has part: feature:15322-16842:-1:exon

WP_014667653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15322-16842:-1:exon

HCN_RS10635
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS10635
so part of: sequence
location: complement(16856..17188)
location: region:16856-17188:-1
so has part: feature:16856-17188:-1:exon
subclass of: SO_0000010

66540524
type: Gene
SIO_000068: ncbigene

position:16856:-1
position: 16856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17188:-1
position: 17188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16856-17188:-1:exon

HCN_RS10635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS10635
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLLYKKCEVCGNNINKLQSIWNLYEVSEKNKFSIVCKNCQTRHKPKAVFYMFLRFLPTDVILGNVFCALFVWLVFPPMQWWLIIIISIAFWHIINFGIVCIMPFYKDSKN
SIO_010081: HCN_RS10635
subclass of: SO_0000673
so part of: HCN_RS10635
location: complement(16856..17188)
location: region:16856-17188:-1
so has part: feature:16856-17188:-1:exon

WP_034548549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16856-17188:-1:exon

HCN_RS10640
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS10640
old locus tag: HCN_p22
so part of: sequence
location: complement(17199..17756)
location: region:17199-17756:-1
so has part: feature:17199-17756:-1:exon
subclass of: SO_0000010

66540525
type: Gene
SIO_000068: ncbigene

position:17199:-1
position: 17199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17756:-1
position: 17756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17199-17756:-1:exon

HCN_RS10640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS10640
old locus tag: HCN_p22
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002957544.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNKDTKHIEEIRAYNNQTIDCKVLESKGIDSINSKLYFMGVELTGGTESNKPYNECFFGELDSKGVFIESKPVYHLQASDELIESTSNNRDSSNADSNNSLSTLDVFLNGSRLTILNYSLLDSSLNIKLECNSSESKEIVEREKTMRDCHEANASANDNPTSTAMLHPILEDTEKLCYTINLAS
SIO_010081: HCN_RS10640
subclass of: SO_0000673
so part of: HCN_RS10640
location: complement(17199..17756)
location: region:17199-17756:-1
so has part: feature:17199-17756:-1:exon

WP_002957544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17199-17756:-1:exon

HCN_RS10645
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS10645
old locus tag: HCN_p23
so part of: sequence
location: complement(17942..19132)
location: region:17942-19132:-1
so has part: feature:17942-19132:-1:exon
subclass of: SO_0000010

66540526
type: Gene
SIO_000068: ncbigene

position:17942:-1
position: 17942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19132:-1
position: 19132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17942-19132:-1:exon

HCN_RS10645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS10645
old locus tag: HCN_p23
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQYFVTIYIDTMKPKLDFIPFTIPHAFLGLTHTHPDELDSQSNIEIEKYSNPRYDSLIGYYFNTIKKDKGKWYERVYPSILSDEFEGEGFFGFGPVTHDTNHWGKVYENNQYAPESNNVVNEYVEPYYYKERSLSTFWQQNRCVFEISKEQYEALVESIKVDVKNTLYINKNSQAAITKELKYDFTNNNCTTWALNKLDSIGIEIIDNEEWLPDNISTRDSLLQKFHYLQYLYAVFRKFQSIDSNLESIAGAKAFRTWARSMTQNKIFCALKIEGDITKGLNISTECKRTITQNQKYYENKLKDFITKSSDFMRVYNNRINEQLERLLTKVKNLGYTNIQGDFTFIMWNDELQTRMLLDSKHRDENTKDYIAYPIEQIDPNIPACNWTLNHKPRLY
SIO_010081: HCN_RS10645
subclass of: SO_0000673
so part of: HCN_RS10645
location: complement(17942..19132)
location: region:17942-19132:-1
so has part: feature:17942-19132:-1:exon

WP_014667654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17942-19132:-1:exon

HCN_RS10650
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS10650
so part of: sequence
location: complement(19153..19515)
location: region:19153-19515:-1
so has part: feature:19153-19515:-1:exon
subclass of: SO_0000010

66540527
type: Gene
SIO_000068: ncbigene

position:19153:-1
position: 19153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19515:-1
position: 19515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19153-19515:-1:exon

HCN_RS10650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS10650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002957546.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKEKFDFSKFILDCLICFGLMIVSVIFCSILVFLLFQLVGLLLYIFGIETDLHILGGFGNFSLFFTLCHTLMFIIYFFLEKTNTIQYRIYKPSFWFVFISINSYWWLAAYHLANGGFSK
SIO_010081: HCN_RS10650
subclass of: SO_0000673
so part of: HCN_RS10650
location: complement(19153..19515)
location: region:19153-19515:-1
so has part: feature:19153-19515:-1:exon

WP_041309721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19153-19515:-1:exon

HCN_RS10655
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS10655
old locus tag: HCN_p24
so part of: sequence
location: complement(19512..19751)
location: region:19512-19751:-1
so has part: feature:19512-19751:-1:exon
subclass of: SO_0000010

66540528
type: Gene
SIO_000068: ncbigene

position:19512:-1
position: 19512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19751:-1
position: 19751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19512-19751:-1:exon

HCN_RS10655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS10655
old locus tag: HCN_p24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005219857.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYFVTMYIKNMQTLSIIPHAFLGLTHTHPDELDKLKDVDIYKYQVGYDSDKPTLIHVKDKWYNNIYPSILDSNFKEIV
SIO_010081: HCN_RS10655
subclass of: SO_0000673
so part of: HCN_RS10655
location: complement(19512..19751)
location: region:19512-19751:-1
so has part: feature:19512-19751:-1:exon

WP_014667655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19512-19751:-1:exon

HCN_RS10660
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS10660
so part of: sequence
location: complement(19748..20242)
location: region:19748-20242:-1
so has part: feature:19748-20242:-1:exon
subclass of: SO_0000010

66540529
type: Gene
SIO_000068: ncbigene

position:19748:-1
position: 19748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20242:-1
position: 20242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19748-20242:-1:exon

HCN_RS10660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS10660
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNIILNYTSLTDTKDKILYIIVMSIVSVICAVCFVISYFYILDCIKVLVENVSLVYALSISFVVCCMYIMAIICGASISKVGTNALCVSSFLVIYFLSFSFLDSILDFQFGWFLVWFGFFIMILPNMLFLLDKIPITIFLLFFLIVNILAFSINLLTYGSWYK
SIO_010081: HCN_RS10660
subclass of: SO_0000673
so part of: HCN_RS10660
location: complement(19748..20242)
location: region:19748-20242:-1
so has part: feature:19748-20242:-1:exon

WP_041309722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19748-20242:-1:exon

HCN_RS12290
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS12290
old locus tag: HCN_p25
so part of: sequence
location: complement(20239..20658)
location: region:20239-20658:-1
so has part: feature:20239-20658:-1:exon
subclass of: SO_0000010

69102613
type: Gene
SIO_000068: ncbigene

position:20239:-1
position: 20239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20658:-1
position: 20658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20239-20658:-1:exon

HCN_RS12290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS12290
old locus tag: HCN_p25
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQGVNIPHAFLGLTHTHPDELDKLKDVDIYKYQVGYDSDKPTLIHVKDKWYNNIYPSILDSNFGDEGFWGFAPVKSKTSHWGVVFENNQYIPKWHDNFQQYTYIDKRPLSTFWQQNRCVFEASKEQYEAVLQSIKKEIS
SIO_010081: HCN_RS12290
subclass of: SO_0000673
so part of: HCN_RS12290
location: complement(20239..20658)
location: region:20239-20658:-1
so has part: feature:20239-20658:-1:exon

WP_014667656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20239-20658:-1:exon

HCN_RS11515
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS11515
so part of: sequence
location: 21120..21260
location: region:21120-21260:1
so has part: feature:21120-21260:1:exon
subclass of: SO_0000010

66540630
type: Gene
SIO_000068: ncbigene

position:21120:1
position: 21120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21260:1
position: 21260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21120-21260:1:exon

HCN_RS11515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS11515
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVLIKNTIVQENTILHANHAICPLVVESSPLDSSFAFRLEYMGRFK
SIO_010081: HCN_RS11515
subclass of: SO_0000673
so part of: HCN_RS11515
location: 21120..21260
location: region:21120-21260:1
so has part: feature:21120-21260:1:exon

WP_158309896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21120-21260:1:exon

HCN_RS10675
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS10675
old locus tag: HCN_p26
so part of: sequence
location: complement(21253..21435)
location: region:21253-21435:-1
so has part: feature:21253-21435:-1:exon
subclass of: SO_0000010

66540531
type: Gene
SIO_000068: ncbigene

position:21253:-1
position: 21253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21435:-1
position: 21435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21253-21435:-1:exon

HCN_RS10675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS10675
old locus tag: HCN_p26
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005219874.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPYFITLYIEPMKPKLDKIPVSIPHAFLGLTHTHPDELDSQSNIELEKYSNLQSLYGGIT
SIO_010081: HCN_RS10675
subclass of: SO_0000673
so part of: HCN_RS10675
location: complement(21253..21435)
location: region:21253-21435:-1
so has part: feature:21253-21435:-1:exon

WP_014667657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21253-21435:-1:exon

HCN_RS10680
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS10680
old locus tag: HCN_p27
so part of: sequence
location: complement(21783..22121)
location: region:21783-22121:-1
so has part: feature:21783-22121:-1:exon
subclass of: SO_0000010

66540532
type: Gene
SIO_000068: ncbigene

position:21783:-1
position: 21783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22121:-1
position: 22121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21783-22121:-1:exon

HCN_RS10680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS10680
old locus tag: HCN_p27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005219877.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKHYATIYIKNMQATSLVPHTFLGLTKENPDKLGKQEIEIQKYKDDYLSGRQFLIKTKGKWYENIYPSILSDDFQGEGFWGFGPENFAFSYPVYKSGKVFENNQYIPKEILR
SIO_010081: HCN_RS10680
subclass of: SO_0000673
so part of: HCN_RS10680
location: complement(21783..22121)
location: region:21783-22121:-1
so has part: feature:21783-22121:-1:exon

WP_014667658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21783-22121:-1:exon

HCN_RS10685
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS10685
old locus tag: HCN_p28
so part of: sequence
location: complement(22118..22609)
location: region:22118-22609:-1
so has part: feature:22118-22609:-1:exon
subclass of: SO_0000010

66540533
type: Gene
SIO_000068: ncbigene

position:22118:-1
position: 22118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22609:-1
position: 22609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22118-22609:-1:exon

HCN_RS10685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS10685
old locus tag: HCN_p28
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIKKETFNYNLLTQTPDKIFYIIIMNLVSIGFAIGVIMLWFFIDRMLVSFAGFSYIDIINNINIGIIICSIILLPIILGVDVLKVFKNILYIFVFVICLFLLGKILNFQWGWLLVIFGNLIMIVPNILLLCEKINFKLFLFHLFIVNFIAFAYNFIAYGEMTK
SIO_010081: HCN_RS10685
subclass of: SO_0000673
so part of: HCN_RS10685
location: complement(22118..22609)
location: region:22118-22609:-1
so has part: feature:22118-22609:-1:exon

WP_034549401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22118-22609:-1:exon

HCN_RS11520
type: Gene
subclass of: SO_0000704
RO_0002162: 1172562
locus tag: HCN_RS11520
so part of: sequence
location: complement(22620..22766)
location: region:22620-22766:-1
so has part: feature:22620-22766:-1:exon
subclass of: SO_0000010

66540631
type: Gene
SIO_000068: ncbigene

position:22620:-1
position: 22620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22766:-1
position: 22766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22620-22766:-1:exon

HCN_RS11520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1172562
locus tag: HCN_RS11520
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQYFVTIYIDILFEKDLLKLDVTHALLGLTRKHPDELIIGALRTINKR
SIO_010081: HCN_RS11520
subclass of: SO_0000673
so part of: HCN_RS11520
location: complement(22620..22766)
location: region:22620-22766:-1
so has part: feature:22620-22766:-1:exon

WP_023947316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22620-22766:-1:exon