Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs417, complete sequence.
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiodictyon.
Complete genome sequence of Candidatus 'Thiodictyon syntrophicum' sp. nov. strain Cad16T, a photolithoautotroph purple sulfur bacterium isolated from an alpine meromictic lake
Submitted (17-MAR-2017) Microbiology, University of Geneva, 30, quai Ernest-Ansermet, Geneva, GE CH - 1211, Switzerland
REFSEQ INFORMATION: The reference sequence is identical to\nCP020371.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: RS_HGAP_Assembly.2 v. Feb 2015\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 200.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/06/2023 08:34:21\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,697\nCDSs (total) :: 6,637\nGenes (coding) :: 6,480\nCDSs (with protein) :: 6,480\nGenes (RNA) :: 60\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 50\nncRNAs :: 4\nPseudo Genes (total) :: 157\nCDSs (without protein) :: 157\nPseudo Genes (ambiguous residues) :: 0 of 157\nPseudo Genes (frameshifted) :: 28 of 157\nPseudo Genes (incomplete) :: 134 of 157\nPseudo Genes (internal stop) :: 19 of 157\nPseudo Genes (multiple problems) :: 22 of 157\nCRISPR Arrays :: 5\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
reference material of Candidatus Thiodictyon syntrophicum
COORDINATES: protein motif:HMM:NF018714.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018260330.1
COORDINATES: protein motif:HMM:NF023168.2
COORDINATES: protein motif:HMM:NF015043.2
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [Evidence IEA]
COORDINATES: protein motif:HMM:NF039984.1
COORDINATES: protein motif:HMM:NF021127.2
COORDINATES: protein motif:HMM:NF022812.2
COORDINATES: similar to AA sequence:RefSeq:WP_009311869.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
tRNA(His) guanylyltransferase Thg1 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003302457.1
COORDINATES: similar to AA sequence:RefSeq:WP_017462098.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015767650.1
COORDINATES: similar to AA sequence:RefSeq:WP_018991109.1
COORDINATES: protein motif:HMM:NF024206.2
ankyrin repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013946699.1
glutathione S-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020506745.1
5-bromo-4-chloroindolyl phosphate hydrolysis family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020506744.1
COORDINATES: similar to AA sequence:RefSeq:WP_019025550.1
GO:0016740 - transferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
TIGR04282 family arsenosugar biosynthesis glycosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015279844.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
Some members of this family are selenoproteins; Derived by automated computational analysis using gene prediction method: Protein Homology.
arsenosugar biosynthesis radical SAM protein ArsS
COORDINATES: protein motif:HMM:NF016041.2
COORDINATES: similar to AA sequence:RefSeq:WP_007195552.1
COORDINATES: similar to AA sequence:RefSeq:WP_015434875.1
COORDINATES: similar to AA sequence:RefSeq:WP_002782963.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004086683.1
RNA-guided endonuclease TnpB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009150622.1
protein-disulfide reductase DsbD family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011648125.1
COORDINATES: protein motif:HMM:NF024861.2
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: similar to AA sequence:RefSeq:WP_020506654.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:NF013235.2
COORDINATES: similar to AA sequence:RefSeq:WP_012617957.1
GO:0046872 - metal ion binding [Evidence IEA]
Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012617958.1
uroporphyrinogen decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014810452.1
COORDINATES: protein motif:HMM:NF024583.2
sensor domain-containing diguanylate cyclase
COORDINATES: protein motif:HMM:NF012863.2
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020507816.1
COORDINATES: similar to AA sequence:RefSeq:WP_020507815.1
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020507814.1
COORDINATES: protein motif:HMM:NF018152.2
COORDINATES: protein motif:HMM:NF015354.2
COORDINATES: similar to AA sequence:RefSeq:WP_020507391.1
COORDINATES: protein motif:HMM:NF014643.2
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_007191265.1
COORDINATES: similar to AA sequence:RefSeq:WP_004212934.1
COORDINATES: similar to AA sequence:RefSeq:WP_012470630.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_020481499.1
GO:0051983 - regulation of chromosome segregation [Evidence IEA]
type II toxin-antitoxin system ParD family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_015282486.1
COORDINATES: similar to AA sequence:RefSeq:WP_020503259.1
COORDINATES: similar to AA sequence:RefSeq:WP_009971435.1
COORDINATES: similar to AA sequence:RefSeq:WP_013874133.1
COORDINATES: similar to AA sequence:RefSeq:WP_020508433.1
COORDINATES: similar to AA sequence:RefSeq:WP_002707884.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
ribbon-helix-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007396268.1
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF019429.2
COORDINATES: protein motif:HMM:TIGR00702.1
COORDINATES: protein motif:HMM:NF016777.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015983.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
PqqD family peptide modification chaperone
COORDINATES: protein motif:HMM:NF033517.1
COORDINATES: protein motif:HMM:NF017528.2
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_007583224.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020505286.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF016876.2
COORDINATES: similar to AA sequence:RefSeq:WP_018231357.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0075713 - establishment of integrated proviral latency [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0006417 - regulation of translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011800404.1
PDDEXK nuclease domain-containing protein
COORDINATES: protein motif:HMM:NF014599.2
GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051262 - protein tetramerization [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015281770.1
form I ribulose bisphosphate carboxylase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_010548779.1
ribulose bisphosphate carboxylase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_006909503.1
COORDINATES: similar to AA sequence:RefSeq:WP_015281773.1
GO:0004089 - carbonate dehydratase activity [Evidence IEA]
GO:0015977 - carbon fixation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002805244.1
COORDINATES: similar to AA sequence:RefSeq:WP_015281775.1
COORDINATES: similar to AA sequence:RefSeq:WP_006171066.1
COORDINATES: similar to AA sequence:RefSeq:WP_015281777.1
COORDINATES: similar to AA sequence:RefSeq:WP_015281778.1
GO:0008199 - ferric iron binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015281779.1
GO:0008124 - 4-alpha-hydroxytetrahydrobiopterin dehydratase activity [Evidence IEA]
GO:0006729 - tetrahydrobiopterin biosynthetic process [Evidence IEA]
4a-hydroxytetrahydrobiopterin dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_015281781.1
COORDINATES: similar to AA sequence:RefSeq:WP_018146203.1
COORDINATES: similar to AA sequence:RefSeq:WP_012971120.1
COORDINATES: similar to AA sequence:RefSeq:WP_008008720.1
COORDINATES: similar to AA sequence:RefSeq:WP_011153617.1
COORDINATES: similar to AA sequence:RefSeq:WP_015746215.1
COORDINATES: similar to AA sequence:RefSeq:WP_005371782.1
COORDINATES: similar to AA sequence:RefSeq:WP_013443005.1
COORDINATES: similar to AA sequence:RefSeq:WP_019918992.1
COORDINATES: similar to AA sequence:RefSeq:WP_013013185.1
COORDINATES: protein motif:HMM:NF015691.2
COORDINATES: protein motif:HMM:TIGR00724.1
biotin-dependent carboxyltransferase family protein
COORDINATES: protein motif:HMM:TIGR00370.1
COORDINATES: similar to AA sequence:RefSeq:WP_013031246.1
COORDINATES: similar to AA sequence:RefSeq:WP_020485172.1
COORDINATES: similar to AA sequence:RefSeq:WP_020507171.1
COORDINATES: similar to AA sequence:RefSeq:WP_020503815.1
GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014779279.1
COORDINATES: similar to AA sequence:RefSeq:WP_020505969.1
GO:0016407 - acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024816.2
COORDINATES: similar to AA sequence:RefSeq:WP_019303585.1
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_004643921.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007042956.1
COORDINATES: protein motif:HMM:NF017885.2
COORDINATES: protein motif:HMM:NF024603.2
COORDINATES: protein motif:HMM:NF012311.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF037016.2
carboxypeptidase regulatory-like domain-containing protein
COORDINATES: protein motif:HMM:NF016255.2
COORDINATES: similar to AA sequence:RefSeq:WP_013531635.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014778065.1
COORDINATES: similar to AA sequence:RefSeq:WP_013034254.1
COORDINATES: similar to AA sequence:RefSeq:WP_020503594.1
CPXCG motif-containing cysteine-rich protein
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: similar to AA sequence:RefSeq:WP_007194137.1
COORDINATES: similar to AA sequence:RefSeq:WP_015279843.1
COORDINATES: similar to AA sequence:RefSeq:WP_015279842.1
COORDINATES: protein motif:HMM:NF024834.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013739.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015281660.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF013015.2
COORDINATES: protein motif:HMM:NF021507.2
phosphodiester glycosidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020503223.1
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF021896.2
disulfide isomerase DsbC N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020504019.1
COORDINATES: similar to AA sequence:RefSeq:WP_007195645.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009151367.1
COORDINATES: similar to AA sequence:RefSeq:WP_009150020.1
COORDINATES: similar to AA sequence:RefSeq:WP_020505400.1
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: protein motif:HMM:NF023276.2
COORDINATES: protein motif:HMM:NF015688.2
COORDINATES: protein motif:HMM:NF017152.2
TraE/TraK family type IV conjugative transfer system protein
COORDINATES: protein motif:HMM:NF013878.2
COORDINATES: protein motif:HMM:NF012975.2
GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020503575.1
COORDINATES: similar to AA sequence:RefSeq:WP_020503576.1
COORDINATES: similar to AA sequence:RefSeq:WP_020503578.1
COORDINATES: similar to AA sequence:RefSeq:WP_020504314.1
COORDINATES: similar to AA sequence:RefSeq:WP_020503580.1
COORDINATES: similar to AA sequence:RefSeq:WP_020503581.1
COORDINATES: protein motif:HMM:NF024935.2
COORDINATES: similar to AA sequence:RefSeq:WP_020504308.1
COORDINATES: protein motif:HMM:NF012403.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0140658 - ATP-dependent chromatin remodeler activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012493.2
COORDINATES: similar to AA sequence:RefSeq:WP_007195456.1
Rpn family recombination-promoting nuclease/putative transposase
COORDINATES: similar to AA sequence:RefSeq:WP_004362269.1
COORDINATES: similar to AA sequence:RefSeq:WP_018280526.1
COORDINATES: similar to AA sequence:RefSeq:WP_015279406.1
COORDINATES: similar to AA sequence:RefSeq:WP_020229221.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010324371.1
COORDINATES: protein motif:HMM:NF017850.2
COORDINATES: similar to AA sequence:RefSeq:WP_014086843.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:TIGR01635.1
GO:0044423 - virion component [Evidence IEA]
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0016032 - viral process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021627.2
COORDINATES: protein motif:HMM:NF021628.2
Mu-like prophage major head subunit gpT family protein
COORDINATES: protein motif:HMM:NF012442.2
COORDINATES: protein motif:HMM:NF018704.2
COORDINATES: protein motif:HMM:NF016847.2
COORDINATES: similar to AA sequence:RefSeq:WP_020503990.1
COORDINATES: similar to AA sequence:RefSeq:WP_020503989.1
COORDINATES: similar to AA sequence:RefSeq:WP_020503988.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020503987.1
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_020503986.1
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
CusA/CzcA family heavy metal efflux RND transporter
COORDINATES: similar to AA sequence:RefSeq:WP_020503984.1
COORDINATES: similar to AA sequence:RefSeq:WP_007191680.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020419.2
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011358598.1
type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020503599.1
COORDINATES: similar to AA sequence:RefSeq:WP_020503600.1
type-F conjugative transfer system secretin TraK
COORDINATES: similar to AA sequence:RefSeq:WP_020503601.1
COORDINATES: similar to AA sequence:RefSeq:WP_020503602.1
type IV conjugative transfer system protein TraL
COORDINATES: similar to AA sequence:RefSeq:WP_020504824.1
COORDINATES: similar to AA sequence:RefSeq:WP_020506202.1
COORDINATES: similar to AA sequence:RefSeq:WP_020503510.1
COORDINATES: similar to AA sequence:RefSeq:WP_007192797.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0015074 - DNA integration [Evidence IEA]
Members of this protein family are the putative conjugative coupling factor, TraD, as the term is used for the SXT and TOL plasmid systems.; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
conjugative transfer system coupling protein TraD
COORDINATES: protein motif:HMM:NF041494.1
COORDINATES: protein motif:HMM:NF039622.1
COORDINATES: similar to AA sequence:RefSeq:WP_020503515.1
COORDINATES: protein motif:HMM:NF013618.2
transglycosylase SLT domain-containing protein
COORDINATES: protein motif:HMM:NF017124.2
GO:0045893 - positive regulation of DNA-templated transcription [Evidence IEA]; GO:1902208 - regulation of bacterial-type flagellum assembly [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02740.1
COORDINATES: protein motif:HMM:NF033564.0
COORDINATES: similar to AA sequence:RefSeq:WP_012535799.1
COORDINATES: similar to AA sequence:RefSeq:WP_017841684.1
COORDINATES: similar to AA sequence:RefSeq:WP_020046829.1
reverse transcriptase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014776674.1
COORDINATES: similar to AA sequence:RefSeq:WP_020506860.1
COORDINATES: similar to AA sequence:RefSeq:WP_020507446.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012585495.1
GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007041302.1
COORDINATES: similar to AA sequence:RefSeq:WP_007194931.1
COORDINATES: similar to AA sequence:RefSeq:WP_020506749.1
COORDINATES: similar to AA sequence:RefSeq:WP_019561922.1
COORDINATES: similar to AA sequence:RefSeq:WP_007194198.1
COORDINATES: similar to AA sequence:RefSeq:WP_004335356.1
COORDINATES: protein motif:HMM:NF013753.2
COORDINATES: similar to AA sequence:RefSeq:WP_005948656.1
COORDINATES: protein motif:HMM:NF013056.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012235.2
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009149739.1
NHLP leader peptide family RiPP precursor
COORDINATES: protein motif:HMM:TIGR00377.1
COORDINATES: protein motif:HMM:NF020650.2
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF018884.2
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024970.2
COORDINATES: similar to AA sequence:RefSeq:WP_014260104.1
xanthine dehydrogenase family protein subunit M
COORDINATES: similar to AA sequence:RefSeq:WP_011641211.1
COORDINATES: similar to AA sequence:RefSeq:WP_015860624.1
COORDINATES: similar to AA sequence:RefSeq:WP_020506536.1
COORDINATES: similar to AA sequence:RefSeq:WP_014779754.1
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: similar to AA sequence:RefSeq:WP_011641204.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017873.2
COORDINATES: similar to AA sequence:RefSeq:WP_014036932.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0050151 - oleate hydratase activity [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020505272.1
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020505271.1
COORDINATES: similar to AA sequence:RefSeq:WP_011330437.1
COORDINATES: similar to AA sequence:RefSeq:WP_020507380.1
COORDINATES: similar to AA sequence:RefSeq:WP_015094682.1
COORDINATES: similar to AA sequence:RefSeq:WP_008060454.1
COORDINATES: similar to AA sequence:RefSeq:WP_003246885.1
COORDINATES: similar to AA sequence:RefSeq:WP_017744142.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008193 - tRNA guanylyltransferase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019717409.1
nucleotidyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006237862.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015766109.1
COORDINATES: protein motif:HMM:NF033446.0
COORDINATES: similar to AA sequence:RefSeq:WP_011797935.1
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: protein motif:HMM:NF015807.2
COORDINATES: protein motif:HMM:NF033451.1
BREX-2 system adenine-specific DNA-methyltransferase PglX
COORDINATES: similar to AA sequence:RefSeq:WP_015081228.1
COORDINATES: similar to AA sequence:RefSeq:WP_020506090.1
COORDINATES: similar to AA sequence:RefSeq:WP_006198155.1
COORDINATES: similar to AA sequence:RefSeq:WP_011797940.1
BREX system serine/threonine kinase PglW
COORDINATES: similar to AA sequence:RefSeq:WP_011110901.1
COORDINATES: similar to AA sequence:RefSeq:WP_020481498.1
COORDINATES: similar to AA sequence:RefSeq:WP_002770782.1
COORDINATES: similar to AA sequence:RefSeq:WP_012453917.1
COORDINATES: similar to AA sequence:RefSeq:WP_014777857.1
COORDINATES: similar to AA sequence:RefSeq:WP_015634410.1
COORDINATES: similar to AA sequence:RefSeq:WP_018990199.1
COORDINATES: similar to AA sequence:RefSeq:WP_017878108.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma factor-like helix-turn-helix DNA-binding protein
COORDINATES: protein motif:HMM:NF015131.2
COORDINATES: similar to AA sequence:RefSeq:WP_020484413.1
COORDINATES: similar to AA sequence:RefSeq:WP_020506791.1
COORDINATES: similar to AA sequence:RefSeq:WP_018902013.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO:0006793 - phosphorus metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007194758.1
COORDINATES: similar to AA sequence:RefSeq:WP_020505285.1
COORDINATES: similar to AA sequence:RefSeq:WP_007193887.1
COORDINATES: similar to AA sequence:RefSeq:WP_009569578.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0097351 - toxin sequestering activity [Evidence IEA]
GO:0001558 - regulation of cell growth [Evidence IEA]
type II toxin-antitoxin system PrlF family antitoxin
COORDINATES: protein motif:HMM:NF013964.2
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013694.2
COORDINATES: similar to AA sequence:RefSeq:WP_020506821.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]; GO:0042301 - phosphate ion binding [Evidence IEA]
phosphate ABC transporter substrate-binding protein PstS
COORDINATES: similar to AA sequence:RefSeq:WP_020506815.1
COORDINATES: similar to AA sequence:RefSeq:WP_015210387.1
COORDINATES: similar to AA sequence:RefSeq:WP_008385907.1
GO:0008792 - arginine decarboxylase activity [Evidence IEA]
GO:0006527 - arginine catabolic process [Evidence IEA]; GO:0006596 - polyamine biosynthetic process [Evidence IEA]
arginine decarboxylase, pyruvoyl-dependent
COORDINATES: similar to AA sequence:RefSeq:WP_020507149.1
GO:0008783 - agmatinase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020506798.1
bifunctional enoyl-CoA hydratase/phosphate acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014777499.1
GO:0008776 - acetate kinase activity [Evidence IEA]
GO:0006083 - acetate metabolic process [Evidence IEA]; GO:0006113 - fermentation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020506830.1
GO:0004318 - enoyl-[acyl-carrier-protein] reductase (NADH) activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020506831.1
COORDINATES: similar to AA sequence:RefSeq:WP_013032509.1
COORDINATES: similar to AA sequence:RefSeq:WP_011975559.1
COORDINATES: similar to AA sequence:RefSeq:WP_006458124.1
COORDINATES: similar to AA sequence:RefSeq:WP_013965266.1
esterase-like activity of phytase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014777086.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_009147229.1
COORDINATES: similar to AA sequence:RefSeq:WP_009628470.1
COORDINATES: similar to AA sequence:RefSeq:WP_012290072.1
COORDINATES: similar to AA sequence:RefSeq:WP_014777493.1
COORDINATES: similar to AA sequence:RefSeq:WP_014777492.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter permease subunit PstC
COORDINATES: similar to AA sequence:RefSeq:WP_015280098.1
COORDINATES: similar to AA sequence:RefSeq:WP_014777490.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: similar to AA sequence:RefSeq:WP_015280100.1
COORDINATES: similar to AA sequence:RefSeq:WP_020506833.1
COORDINATES: similar to AA sequence:RefSeq:WP_015280022.1
COORDINATES: similar to AA sequence:RefSeq:WP_007040727.1
COORDINATES: protein motif:HMM:NF017085.2
COORDINATES: similar to AA sequence:RefSeq:WP_020505208.1
COORDINATES: similar to AA sequence:RefSeq:WP_020506825.1
COORDINATES: similar to AA sequence:RefSeq:WP_020506826.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020506827.1
COORDINATES: similar to AA sequence:RefSeq:WP_020506792.1
COORDINATES: similar to AA sequence:RefSeq:WP_020506793.1
COORDINATES: protein motif:HMM:NF024592.2
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: similar to AA sequence:RefSeq:WP_020506805.1
COORDINATES: similar to AA sequence:RefSeq:WP_007041518.1
COORDINATES: similar to AA sequence:RefSeq:WP_012971520.1
COORDINATES: similar to AA sequence:RefSeq:WP_006510353.1
COORDINATES: protein motif:HMM:TIGR00180.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein