Fervidicoccus fontis Kam940, complete sequence.
Archaea; Thermoproteota; Thermoprotei; Fervidicoccales; Fervidicoccaceae; Fervidicoccus.
Analysis of the complete genome of Fervidococcus fontis confirms the distinct phylogenetic position of the order Fervidicoccales and suggests its environmental function
Submitted (16-MAR-2012) Lab of Molecular Cloning, Centre Bioengineering Ras, Prosp. 60-Let Oktyabria, Moscow 117312, Russia
REFSEQ INFORMATION: The reference sequence is identical to\nCP003423.1.\nSource DNA is available from Dr. E.A. Bonch-Osmolovskaya\n(elizaveta.bo@gmail.com).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/24/2023 00:35:23\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,409\nCDSs (total) :: 1,360\nGenes (coding) :: 1,357\nCDSs (with protein) :: 1,357\nGenes (RNA) :: 49\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 44\nncRNAs :: 2\nPseudo Genes (total) :: 3\nCDSs (without protein) :: 3\nPseudo Genes (ambiguous residues) :: 0 of 3\nPseudo Genes (frameshifted) :: 0 of 3\nPseudo Genes (incomplete) :: 3 of 3\nPseudo Genes (internal stop) :: 0 of 3\nCRISPR Arrays :: 4\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF012235.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF017812.2
COORDINATES: protein motif:HMM:NF014035.2
sulfite exporter TauE/SafE family protein
COORDINATES: protein motif:HMM:NF016064.2
YeeE/YedE thiosulfate transporter family protein
COORDINATES: protein motif:HMM:NF013970.2
type II toxin-antitoxin system VapC family toxin
COORDINATES: protein motif:HMM:NF014017.2
COORDINATES: protein motif:HMM:NF012936.2
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014015.2
COORDINATES: protein motif:HMM:NF002281.0
COORDINATES: protein motif:HMM:NF014685.2
GO:0051073 - adenosylcobinamide-GDP ribazoletransferase activity [Evidence IEA]; GO:0008818 - cobalamin 5'-phosphate synthase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: protein motif:HMM:NF012382.2
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024214.2
NTP transferase domain-containing protein
COORDINATES: protein motif:HMM:NF014060.2
COORDINATES: protein motif:HMM:NF003372.0
COORDINATES: protein motif:HMM:NF014633.2
COORDINATES: protein motif:HMM:NF013362.2
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
RsmB/NOP family class I SAM-dependent RNA methyltransferase
COORDINATES: protein motif:HMM:NF013324.2
COORDINATES: protein motif:HMM:NF012783.2
COORDINATES: protein motif:HMM:TIGR00104.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
COORDINATES: protein motif:HMM:NF025694.2
COORDINATES: protein motif:HMM:NF014273.2
ParB N-terminal domain-containing protein
asparagine synthase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF020434.2
COORDINATES: protein motif:HMM:TIGR01766.2
GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
IS200/IS605 family accessory protein TnpB-related protein
COORDINATES: protein motif:HMM:NF006358.0
anaerobic ribonucleoside triphosphate reductase
COORDINATES: protein motif:HMM:TIGR02495.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]; GO:0051353 - positive regulation of oxidoreductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase activating protein
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
COORDINATES: protein motif:HMM:NF021551.2
CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6
COORDINATES: protein motif:HMM:TIGR01884.1
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01587.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01874.1
GO:0003674 - molecular_function [Evidence IEA]
type I-A CRISPR-associated protein Cas5a
COORDINATES: protein motif:HMM:TIGR02583.1
type I-A CRISPR-associated protein Cas7/Csa2
COORDINATES: protein motif:HMM:NF017803.2
type I-A CRISPR-associated protein Cas4/Csa1
COORDINATES: protein motif:HMM:TIGR00287.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01573.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00372.1
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014080.2
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:TIGR02619.1
COORDINATES: protein motif:HMM:TIGR01898.1
type III-B CRISPR module RAMP protein Cmr6
COORDINATES: protein motif:HMM:TIGR01881.1
type III-B CRISPR module-associated protein Cmr5
COORDINATES: protein motif:HMM:TIGR02580.1
type III-B CRISPR module RAMP protein Cmr4
COORDINATES: protein motif:HMM:TIGR02577.1
type III-B CRISPR-associated protein Cas10/Cmr2
COORDINATES: protein motif:HMM:TIGR01897.1
COORDINATES: similar to AA sequence:RefSeq:WP_014557364.1
COORDINATES: similar to AA sequence:RefSeq:WP_014557371.1
COORDINATES: protein motif:HMM:NF013151.2
COORDINATES: protein motif:HMM:NF012652.2
type II/IV secretion system ATPase subunit
COORDINATES: protein motif:HMM:NF012334.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF015753.2
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031004 - potassium ion-transporting ATPase complex [Evidence IEA]
GO:0008556 - P-type potassium transmembrane transporter activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]
potassium-transporting ATPase subunit KdpA
COORDINATES: protein motif:HMM:NF012905.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014699.2
GO:0008556 - P-type potassium transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014044.2
COORDINATES: protein motif:HMM:NF021897.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF014448.2
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
molybdenum cofactor biosynthesis protein MoaE
COORDINATES: protein motif:HMM:NF014636.2
COORDINATES: protein motif:HMM:NF010338.0
COORDINATES: nucleotide motif:Rfam:14.4:RF01857
archaeal-type; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: protein motif:HMM:NF014088.2
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: protein motif:HMM:NF016030.2
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: protein motif:HMM:TIGR01718.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014565.2
GO:0004576 - oligosaccharyl transferase activity [Evidence IEA]
GO:0006486 - protein glycosylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF039482.1
COORDINATES: protein motif:HMM:NF028455.2
COORDINATES: protein motif:HMM:NF005050.0
GO:0003676 - nucleic acid binding [Evidence IEA]
OB-fold nucleic acid binding domain-containing protein
COORDINATES: protein motif:HMM:NF017239.2
COORDINATES: protein motif:HMM:NF012933.2
COORDINATES: protein motif:HMM:TIGR01060.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018194111.1
GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
S-methyl-5-thioribose-1-phosphate isomerase
COORDINATES: protein motif:HMM:NF024910.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF040869.1
GO:0008886 - glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity [Evidence IEA]
NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF024698.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013570.2
COORDINATES: protein motif:HMM:NF013053.2
isochorismatase family cysteine hydrolase
COORDINATES: protein motif:HMM:NF012544.2
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: protein motif:HMM:TIGR03879.1
COORDINATES: protein motif:HMM:NF002446.0
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: protein motif:HMM:NF012738.2
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014342.2
COORDINATES: protein motif:HMM:NF013222.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022077.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: protein motif:HMM:TIGR02187.1
COORDINATES: protein motif:HMM:NF014033.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0031419 - cobalamin binding [Evidence IEA]; GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
GO:0009235 - cobalamin metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014710.2
COORDINATES: protein motif:HMM:NF015889.2
COORDINATES: protein motif:HMM:NF013348.2
COORDINATES: similar to AA sequence:RefSeq:WP_018194047.1
COORDINATES: protein motif:HMM:NF019581.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF005559.1
COORDINATES: protein motif:HMM:NF013776.2
COORDINATES: protein motif:HMM:NF013885.2
COORDINATES: protein motif:HMM:NF012428.2
aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:NF017159.2
COORDINATES: protein motif:HMM:NF037982.1
COORDINATES: protein motif:HMM:NF013715.2
COORDINATES: protein motif:HMM:NF014021.2
nucleotidyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF017020.2
COORDINATES: protein motif:HMM:NF015983.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012686.2
COORDINATES: protein motif:HMM:NF012678.2
COORDINATES: protein motif:HMM:TIGR00532.1
GO:0004420 - hydroxymethylglutaryl-CoA reductase (NADPH) activity [Evidence IEA]
GO:0016054 - organic acid catabolic process [Evidence IEA]
hydroxymethylglutaryl-CoA reductase, degradative
COORDINATES: protein motif:HMM:NF013206.2
gamma-glutamyltransferase family protein
COORDINATES: protein motif:HMM:NF012492.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00177.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]
MogA/MoaB family molybdenum cofactor biosynthesis protein
COORDINATES: protein motif:HMM:NF011068.0
GO:0032324 - molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015418.2
COORDINATES: protein motif:HMM:NF001199.0
COORDINATES: protein motif:HMM:NF008999.0
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: similar to AA sequence:RefSeq:WP_011011461.1
aldehyde ferredoxin oxidoreductase family protein
COORDINATES: protein motif:HMM:TIGR01687.1
COORDINATES: protein motif:HMM:TIGR04317.1
tungsten cofactor oxidoreductase radical SAM maturase
COORDINATES: protein motif:HMM:NF012546.2
COORDINATES: protein motif:HMM:TIGR01230.1
GO:0008783 - agmatinase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00080.1
GO:0004719 - protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
protein-L-isoaspartate(D-aspartate) O-methyltransferase
COORDINATES: protein motif:HMM:NF015960.2
COORDINATES: protein motif:HMM:NF014527.2
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012376.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021528.2
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF018242.2
COORDINATES: protein motif:HMM:NF018816.2
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: protein motif:HMM:NF014585.2
hydantoinase B/oxoprolinase family protein
COORDINATES: protein motif:HMM:NF014071.2
hydantoinase/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014557225.1
COORDINATES: protein motif:HMM:NF012904.2
dihydrodipicolinate synthase family protein
COORDINATES: protein motif:HMM:NF013481.2
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: protein motif:HMM:NF014068.2
type 1 glutamine amidotransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014557226.1
COORDINATES: protein motif:HMM:NF013322.2
GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF014360.2
COORDINATES: protein motif:HMM:NF013827.2
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
rhomboid family intramembrane serine protease
COORDINATES: protein motif:HMM:NF014084.2
COORDINATES: protein motif:HMM:NF016382.2
COORDINATES: protein motif:HMM:NF012452.2
20S proteasome protein subunits alpha/beta
COORDINATES: similar to AA sequence:RefSeq:WP_018194519.1
type II glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF013232.2
COORDINATES: protein motif:HMM:NF012383.2
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016352.2
COORDINATES: protein motif:HMM:TIGR04337.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
AmmeMemoRadiSam system radical SAM enzyme
COORDINATES: protein motif:HMM:NF015018.2
COORDINATES: protein motif:HMM:NF039181.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012568.2
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015639.2
COORDINATES: protein motif:HMM:TIGR00471.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF003210.0
phenylalanine--tRNA ligase subunit alpha
COORDINATES: protein motif:HMM:NF014893.2
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: protein motif:HMM:NF024842.2
COORDINATES: similar to AA sequence:RefSeq:WP_018194320.1
COORDINATES: protein motif:HMM:NF006346.0
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: protein motif:HMM:NF024874.2
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024064.2
ribbon-helix-helix domain-containing protein
COORDINATES: protein motif:HMM:NF024110.2
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF041175.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024851.2
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014025.2
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: protein motif:HMM:NF013334.2
GO:0016151 - nickel cation binding [Evidence IEA]
GO:0051604 - protein maturation [Evidence IEA]
hydrogenase/urease maturation nickel metallochaperone HypA
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: protein motif:HMM:NF017941.2
COORDINATES: protein motif:HMM:NF005574.0
GO:0004589 - dihydroorotate dehydrogenase (NADH) activity [Evidence IEA]; GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00857.1
COORDINATES: protein motif:HMM:NF021903.2
COORDINATES: protein motif:HMM:TIGR00240.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
aspartate carbamoyltransferase regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018194446.1
COORDINATES: protein motif:HMM:TIGR00336.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012441.2
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018193643.1
COORDINATES: protein motif:HMM:NF013582.2
GO:0000398 - mRNA splicing, via spliceosome [Evidence IEA]; GO:0008033 - tRNA processing [Evidence IEA]
U6 snRNA-associated Sm-like protein LSm6
COORDINATES: protein motif:HMM:NF013382.2
COORDINATES: protein motif:HMM:NF041120.1
COORDINATES: protein motif:HMM:NF003365.0
COORDINATES: protein motif:HMM:NF016219.2
COORDINATES: protein motif:HMM:NF013341.2
COORDINATES: protein motif:HMM:NF014037.2
COORDINATES: protein motif:HMM:TIGR00296.1
COORDINATES: protein motif:HMM:TIGR00574.1
COORDINATES: protein motif:HMM:NF017200.2
COORDINATES: protein motif:HMM:TIGR00758.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:TIGR00024.1
COORDINATES: protein motif:HMM:NF013315.2
COORDINATES: protein motif:HMM:NF012706.2
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018194161.1
COORDINATES: similar to AA sequence:RefSeq:WP_018194875.1
COORDINATES: protein motif:HMM:NF012336.2
COORDINATES: protein motif:HMM:NF013920.2
Zn-ribbon domain-containing OB-fold protein
COORDINATES: protein motif:HMM:NF014788.2
COORDINATES: protein motif:HMM:TIGR00442.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015956.2
GO:0046914 - transition metal ion binding [Evidence IEA]
GO:0055072 - iron ion homeostasis [Evidence IEA]; GO:0006811 - monoatomic ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF008818.0
3-methyl-2-oxobutanoate dehydrogenase subunit beta
COORDINATES: protein motif:HMM:NF013974.2
COORDINATES: similar to AA sequence:RefSeq:WP_014558343.1
COORDINATES: protein motif:HMM:TIGR02175.1
GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: protein motif:HMM:TIGR00374.1
COORDINATES: protein motif:HMM:TIGR00501.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004064.0
GO:0004126 - cytidine deaminase activity [Evidence IEA]
GO:0008655 - pyrimidine-containing compound salvage [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03330.1
GO:0004014 - adenosylmethionine decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013250.2
GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: protein motif:HMM:NF024319.2
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: protein motif:HMM:TIGR01064.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
50S ribosomal protein L11 methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_018003339.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03972.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: protein motif:HMM:TIGR00797.1
COORDINATES: similar to AA sequence:RefSeq:WP_014557842.1
COORDINATES: protein motif:HMM:NF014102.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018194145.1
COORDINATES: protein motif:HMM:NF013561.2
COORDINATES: protein motif:HMM:NF015333.2
ZPR1 zinc finger domain-containing protein
COORDINATES: protein motif:HMM:NF013734.2
COORDINATES: protein motif:HMM:NF005013.0
COORDINATES: similar to AA sequence:RefSeq:WP_014557556.1
COORDINATES: protein motif:HMM:NF003314.0
COORDINATES: protein motif:HMM:NF011481.0
COORDINATES: protein motif:HMM:TIGR00489.1
COORDINATES: similar to AA sequence:RefSeq:WP_018194101.1
COORDINATES: similar to AA sequence:RefSeq:WP_018194103.1
COORDINATES: similar to AA sequence:RefSeq:WP_018032260.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001913.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
ADP-forming succinate--CoA ligase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_014557801.1
COORDINATES: protein motif:HMM:TIGR02228.1
COORDINATES: similar to AA sequence:RefSeq:WP_014557747.1
COORDINATES: similar to AA sequence:RefSeq:WP_018193726.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021350.2
AAA-associated domain-containing protein
COORDINATES: protein motif:HMM:NF001592.0
COORDINATES: protein motif:HMM:NF024248.2
COORDINATES: protein motif:HMM:NF001696.0
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006546 - glycine catabolic process [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase subunit GcvPA
COORDINATES: protein motif:HMM:NF003346.0
aminomethyl-transferring glycine dehydrogenase subunit GcvPB
COORDINATES: protein motif:HMM:NF014075.2
COORDINATES: protein motif:HMM:NF013411.2
GO:0070497 - 6-carboxy-5,6,7,8-tetrahydropterin synthase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014681.2
COORDINATES: protein motif:HMM:NF018968.2
COORDINATES: protein motif:HMM:NF024571.2
COORDINATES: protein motif:HMM:NF037920.2
COORDINATES: protein motif:HMM:NF001567.0
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: protein motif:HMM:TIGR00292.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
sulfide-dependent adenosine diphosphate thiazole synthase
COORDINATES: protein motif:HMM:NF002270.0
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
COORDINATES: protein motif:HMM:NF021287.2
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: protein motif:HMM:NF018455.2
COORDINATES: protein motif:HMM:NF015940.2
COORDINATES: protein motif:HMM:NF013429.2
COORDINATES: protein motif:HMM:TIGR00729.1
GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF028207.2
COORDINATES: protein motif:HMM:NF015899.2
COORDINATES: protein motif:HMM:TIGR03990.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018194034.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: protein motif:HMM:NF012791.2
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012389.2
GO:0004618 - phosphoglycerate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024804.2
COORDINATES: protein motif:HMM:TIGR00592.1
COORDINATES: protein motif:HMM:NF022137.2
COORDINATES: protein motif:HMM:TIGR00768.1
GO:0016881 - acid-amino acid ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013146.2
COORDINATES: similar to AA sequence:RefSeq:WP_014557497.1
COORDINATES: protein motif:HMM:NF001986.0
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: protein motif:HMM:NF014344.2
COORDINATES: protein motif:HMM:NF014774.2
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024581.2
COORDINATES: protein motif:HMM:NF014910.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
FAD-linked oxidase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF039222.1
COORDINATES: protein motif:HMM:NF013707.2
indolepyruvate oxidoreductase subunit beta
indolepyruvate ferredoxin oxidoreductase subunit alpha
COORDINATES: protein motif:HMM:NF039907.1
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF010589.0
COORDINATES: protein motif:HMM:TIGR01439.1
COORDINATES: protein motif:HMM:NF016061.2
COORDINATES: protein motif:HMM:NF003142.0
COORDINATES: protein motif:HMM:NF020899.2
COORDINATES: protein motif:HMM:NF014231.2
COORDINATES: protein motif:HMM:TIGR03992.1
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018193510.1
COORDINATES: protein motif:HMM:NF015952.2
GTP-dependent dephospho-CoA kinase family protein
COORDINATES: protein motif:HMM:NF017867.2
GO:0003711 - transcription elongation factor activity [Evidence IEA]
transcription elongation factor subunit Spt4
COORDINATES: protein motif:HMM:NF006333.0
COORDINATES: protein motif:HMM:NF037434.2
COORDINATES: protein motif:HMM:NF003077.0
translation initiation factor IF-2 subunit gamma
COORDINATES: protein motif:HMM:NF013273.2
COORDINATES: protein motif:HMM:NF003078.0
COORDINATES: similar to AA sequence:RefSeq:WP_018033870.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018194925.1
COORDINATES: protein motif:HMM:NF003080.0
COORDINATES: similar to AA sequence:RefSeq:WP_018194923.1
COORDINATES: protein motif:HMM:NF003169.0
COORDINATES: protein motif:HMM:NF021417.2
COORDINATES: protein motif:HMM:TIGR02151.1
GO:0004452 - isopentenyl-diphosphate delta-isomerase activity [Evidence IEA]
type 2 isopentenyl-diphosphate Delta-isomerase
COORDINATES: protein motif:HMM:NF040647.1
COORDINATES: protein motif:HMM:TIGR04336.1
COORDINATES: protein motif:HMM:TIGR01012.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:NF003089.1
COORDINATES: protein motif:HMM:NF001749.0
COORDINATES: similar to AA sequence:RefSeq:WP_018194913.1
COORDINATES: protein motif:HMM:NF003079.0
COORDINATES: protein motif:HMM:NF001988.0
COORDINATES: similar to AA sequence:RefSeq:WP_018194747.1
COORDINATES: protein motif:HMM:NF003139.0
COORDINATES: similar to AA sequence:RefSeq:WP_018194745.1
COORDINATES: protein motif:HMM:NF017181.2
COORDINATES: protein motif:HMM:TIGR01891.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF023183.2
COORDINATES: protein motif:HMM:NF012311.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: similar to AA sequence:RefSeq:WP_018194615.1
GO:0008150 - biological_process [Evidence IEA]
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: protein motif:HMM:NF014573.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014051.2
COORDINATES: protein motif:HMM:NF013718.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF021916.2
GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]; GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017026.2
COORDINATES: protein motif:HMM:NF003280.0
RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
COORDINATES: protein motif:HMM:NF019679.2
H/ACA RNA-protein complex component Cbf5p
COORDINATES: similar to AA sequence:RefSeq:WP_018194743.1
COORDINATES: protein motif:HMM:TIGR02173.1
COORDINATES: protein motif:HMM:NF003143.0
COORDINATES: protein motif:HMM:NF003122.0
COORDINATES: protein motif:HMM:NF006341.0
COORDINATES: protein motif:HMM:NF013024.2
COORDINATES: protein motif:HMM:NF004711.0
COORDINATES: protein motif:HMM:NF003125.0
COORDINATES: protein motif:HMM:NF006342.0
COORDINATES: protein motif:HMM:NF013448.2
COORDINATES: protein motif:HMM:NF006332.0
COORDINATES: protein motif:HMM:NF004037.0
COORDINATES: protein motif:HMM:NF003115.0
COORDINATES: similar to AA sequence:RefSeq:WP_018194730.1
COORDINATES: protein motif:HMM:NF003258.0
COORDINATES: protein motif:HMM:NF003312.0
COORDINATES: protein motif:HMM:NF028216.2
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF006344.0
COORDINATES: similar to AA sequence:RefSeq:WP_018194725.1
COORDINATES: protein motif:HMM:NF013985.2
COORDINATES: similar to AA sequence:RefSeq:WP_018194723.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF003219.0
COORDINATES: protein motif:HMM:NF003260.0
COORDINATES: protein motif:HMM:NF003121.0
COORDINATES: protein motif:HMM:NF017569.2
COORDINATES: protein motif:HMM:NF019348.2
COORDINATES: similar to AA sequence:RefSeq:WP_018194719.1
COORDINATES: protein motif:HMM:NF011118.0
COORDINATES: protein motif:HMM:TIGR03672.1
COORDINATES: protein motif:HMM:NF003261.0
COORDINATES: protein motif:HMM:NF014637.2
COORDINATES: protein motif:HMM:NF012360.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012472.2
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019380.2
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: protein motif:HMM:NF040105.1
COORDINATES: protein motif:HMM:NF013132.2
COORDINATES: protein motif:HMM:NF006082.0
GO:0016836 - hydro-lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00722.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015882.2
COORDINATES: protein motif:HMM:NF014101.2
COORDINATES: similar to AA sequence:RefSeq:WP_014557818.1
COORDINATES: protein motif:HMM:NF012804.2
class II aldolase/adducin family protein
COORDINATES: protein motif:HMM:NF040865.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF041171.1
GO:0018491 - 2-oxobutyrate synthase activity [Evidence IEA]; GO:0047553 - 2-oxoglutarate synthase activity [Evidence IEA]; GO:0019164 - pyruvate synthase activity [Evidence IEA]
2-oxoacid:ferredoxin oxidoreductase subunit beta
COORDINATES: protein motif:HMM:TIGR03710.1
2-oxoacid:ferredoxin oxidoreductase subunit alpha
COORDINATES: protein motif:HMM:NF000848.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018193728.1
COORDINATES: protein motif:HMM:NF006868.0
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: protein motif:HMM:TIGR00877.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF006766.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
formate-dependent phosphoribosylglycinamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_018194820.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: protein motif:HMM:NF014726.2
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
phosphoribosylformylglycinamidine synthase subunit PurS
COORDINATES: protein motif:HMM:NF002957.0
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine synthase subunit PurQ
COORDINATES: protein motif:HMM:NF002290.1
phosphoribosylformylglycinamidine synthase subunit PurL
COORDINATES: protein motif:HMM:TIGR01134.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00878.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: protein motif:HMM:NF018656.2
formate--phosphoribosylaminoimidazolecarboxamide ligase family protein
COORDINATES: protein motif:HMM:TIGR00928.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
formate--phosphoribosylaminoimidazolecarboxamide ligase
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: protein motif:HMM:NF012312.2
COORDINATES: protein motif:HMM:NF013188.2
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018193830.1
COORDINATES: protein motif:HMM:NF021625.2
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
thiamine-phosphate synthase family protein
COORDINATES: protein motif:HMM:NF021348.2
COORDINATES: protein motif:HMM:NF014420.2
energy-coupling factor transporter transmembrane component T
COORDINATES: protein motif:HMM:NF013117.2
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
mechanosensitive ion channel family protein
COORDINATES: protein motif:HMM:NF014325.2
COORDINATES: protein motif:HMM:NF001960.0
COORDINATES: protein motif:HMM:NF025217.2
COORDINATES: protein motif:HMM:NF012695.2
COORDINATES: protein motif:HMM:TIGR01046.1
COORDINATES: similar to AA sequence:RefSeq:WP_018194711.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
translation elongation factor EF-1 subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_020247627.1
COORDINATES: protein motif:HMM:NF006761.0
COORDINATES: protein motif:HMM:NF014618.2
COORDINATES: similar to AA sequence:RefSeq:WP_018194709.1
COORDINATES: protein motif:HMM:TIGR01952.1
NusA-like transcription termination signal-binding factor
COORDINATES: protein motif:HMM:NF002172.0
COORDINATES: protein motif:HMM:TIGR02389.1
COORDINATES: similar to AA sequence:RefSeq:WP_018194705.1
COORDINATES: similar to AA sequence:RefSeq:WP_018194704.1
COORDINATES: protein motif:HMM:NF007129.0
COORDINATES: similar to AA sequence:RefSeq:WP_014557513.1
COORDINATES: protein motif:HMM:NF019464.2
COORDINATES: protein motif:HMM:NF013379.2
COORDINATES: protein motif:HMM:NF014672.2
COORDINATES: protein motif:HMM:NF013461.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004612 - phosphoenolpyruvate carboxykinase (ATP) activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF019378.2
COORDINATES: protein motif:HMM:TIGR01575.1
GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: protein motif:HMM:NF014620.2
NifB/NifX family molybdenum-iron cluster-binding protein
COORDINATES: protein motif:HMM:TIGR00369.1
GO:0047617 - acyl-CoA hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013413.2
GO:0070573 - metallodipeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:NF027681.2
NAD-dependent epimerase/dehydratase family protein
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:NF018696.2
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016145.2
polysaccharide pyruvyl transferase family protein
COORDINATES: protein motif:HMM:NF016328.2
Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain
COORDINATES: protein motif:HMM:NF025072.2
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF026257.2
COORDINATES: protein motif:HMM:TIGR00975.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]; GO:0042301 - phosphate ion binding [Evidence IEA]
phosphate ABC transporter substrate-binding protein PstS
COORDINATES: protein motif:HMM:TIGR02138.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter permease subunit PstC
GO:0006817 - phosphate ion transport [Evidence IEA]
phosphate ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014557820.1
COORDINATES: similar to AA sequence:RefSeq:WP_014557505.1
COORDINATES: similar to AA sequence:RefSeq:WP_014558101.1
COORDINATES: protein motif:HMM:NF012795.2
COORDINATES: protein motif:HMM:NF013226.2
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: protein motif:HMM:NF013923.2
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013134.2
xanthine dehydrogenase family protein subunit M
COORDINATES: protein motif:HMM:NF014758.2
COORDINATES: protein motif:HMM:NF014827.2
GO:0006520 - amino acid metabolic process [Evidence IEA]
Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein
COORDINATES: protein motif:HMM:TIGR04350.1
GO:0004121 - cystathionine beta-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014557686.1
COORDINATES: similar to AA sequence:RefSeq:WP_014557799.1
COORDINATES: protein motif:HMM:NF014074.2
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
carboxypeptidase-like regulatory domain-containing protein
COORDINATES: protein motif:HMM:NF015513.2
COORDINATES: similar to AA sequence:RefSeq:WP_018194334.1
daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF014591.2
COORDINATES: similar to AA sequence:RefSeq:WP_014557489.1
COORDINATES: protein motif:HMM:NF021370.2
COORDINATES: protein motif:HMM:NF003075.0
GO:0000502 - proteasome complex [Evidence IEA]
GO:0004175 - endopeptidase activity [Evidence IEA]
GO:0010498 - proteasomal protein catabolic process [Evidence IEA]
archaeal proteasome endopeptidase complex subunit alpha
COORDINATES: protein motif:HMM:NF013996.2
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF017999.2
COORDINATES: protein motif:HMM:NF017019.2
COORDINATES: protein motif:HMM:TIGR01491.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024592.2
COORDINATES: protein motif:HMM:NF014029.2
COORDINATES: protein motif:HMM:TIGR01054.1
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01647.1
plasma-membrane proton-efflux P-type ATPase
COORDINATES: protein motif:HMM:TIGR00435.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF003088.0
GO:0006325 - chromatin organization [Evidence IEA]
COORDINATES: protein motif:HMM:NF013832.2
COORDINATES: protein motif:HMM:NF012434.2
GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019846.2
methyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF012675.2
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF010587.0
GO:0008795 - NAD+ synthase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013213.2
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF012766.2
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015268.2
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: protein motif:HMM:NF019075.2
COORDINATES: protein motif:HMM:TIGR01187.1
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013697.2
COORDINATES: protein motif:HMM:TIGR00421.1
COORDINATES: protein motif:HMM:NF027528.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF003336.0
COORDINATES: protein motif:HMM:NF003218.0
COORDINATES: protein motif:HMM:NF002294.0
COORDINATES: protein motif:HMM:NF013319.2
GO:0008452 - RNA ligase activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF003301.0
DNA repair and recombination protein RadA
COORDINATES: protein motif:HMM:NF015057.2
GO:0050334 - thiaminase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013088.2
GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF002243.0
GO:0000309 - nicotinamide-nucleotide adenylyltransferase activity [Evidence IEA]
nicotinamide-nucleotide adenylyltransferase
COORDINATES: protein motif:HMM:NF014003.2
COORDINATES: protein motif:HMM:NF020489.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
threonyl-tRNA synthetase editing domain-containing protein
COORDINATES: protein motif:HMM:NF013614.2
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
SufD family Fe-S cluster assembly protein
COORDINATES: protein motif:HMM:TIGR01980.1
GO:0005198 - structural molecule activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01978.1
COORDINATES: protein motif:HMM:TIGR00126.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00389.1
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013982.2
COORDINATES: protein motif:HMM:TIGR00324.1
GO:0000214 - tRNA-intron endonuclease complex [Evidence IEA]
GO:0000213 - tRNA-intron endonuclease activity [Evidence IEA]
GO:0006388 - tRNA splicing, via endonucleolytic cleavage and ligation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013094.2
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015048.2
COORDINATES: protein motif:HMM:NF016289.2
COORDINATES: similar to AA sequence:RefSeq:WP_014558042.1
COORDINATES: protein motif:HMM:TIGR01127.1
GO:0004794 - L-threonine ammonia-lyase activity [Evidence IEA]
GO:0006549 - isoleucine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF004005.0
GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014476.2
COORDINATES: protein motif:HMM:NF014099.2
COORDINATES: protein motif:HMM:NF020400.2
COORDINATES: protein motif:HMM:NF024138.2
substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF014164.2
COORDINATES: protein motif:HMM:TIGR01297.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
cation diffusion facilitator family transporter
COORDINATES: protein motif:HMM:NF022955.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024573.2
COORDINATES: protein motif:HMM:NF020933.2
DNA double-strand break repair nuclease NurA
COORDINATES: protein motif:HMM:NF016214.2
COORDINATES: protein motif:HMM:TIGR00437.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00549.1
GO:0004496 - mevalonate kinase activity [Evidence IEA]
GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA]; GO:0016126 - sterol biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014073.2
tripartite tricarboxylate transporter permease
COORDINATES: protein motif:HMM:NF015444.2
COORDINATES: protein motif:HMM:NF025066.2
COORDINATES: protein motif:HMM:NF020078.2
COORDINATES: protein motif:HMM:NF013224.2
Lrp/AsnC ligand binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00144.1
COORDINATES: protein motif:HMM:NF002621.0
COORDINATES: similar to AA sequence:RefSeq:WP_018193615.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00373
archaeal type; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF003082.0
COORDINATES: similar to AA sequence:RefSeq:WP_018194891.1
COORDINATES: protein motif:HMM:NF010328.0
COORDINATES: protein motif:HMM:NF009945.0
ribosome biogenesis/translation initiation ATPase RLI
COORDINATES: protein motif:HMM:NF016842.2
GO:0030674 - protein-macromolecule adaptor activity [Evidence IEA]; GO:0043023 - ribosomal large subunit binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF016157.2
COORDINATES: protein motif:HMM:NF003067.0
translation initiation factor IF-2 subunit beta
COORDINATES: protein motif:HMM:NF022128.2
COORDINATES: protein motif:HMM:NF003069.1
COORDINATES: protein motif:HMM:TIGR00270.2
COORDINATES: protein motif:HMM:NF014474.2
COORDINATES: protein motif:HMM:NF014096.2
catalyzes the S-adenosyl-methionine-dependent 2'-O-ribose methylation of C56 in tRNA transcripts; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012372.2
GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF002022.0
NAD(P)-dependent glycerol-1-phosphate dehydrogenase
COORDINATES: protein motif:HMM:TIGR01536.1
asparagine synthase (glutamine-hydrolyzing)
COORDINATES: protein motif:HMM:NF003483.0
GO:0004815 - aspartate-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006422 - aspartyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00521.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: protein motif:HMM:NF010324.0
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014912.2
COORDINATES: protein motif:HMM:NF001647.0
Sjogren's syndrome/scleroderma autoantigen 1 family protein
COORDINATES: protein motif:HMM:NF014923.2
COORDINATES: protein motif:HMM:NF014877.2
phosphopentomutase/phosphoglucosamine mutase
COORDINATES: protein motif:HMM:TIGR03127.1
GO:0016853 - isomerase activity [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF009714.1
GO:0047964 - glyoxylate reductase (NAD+) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018194821.1
orc1/cdc6 family replication initiation protein
COORDINATES: protein motif:HMM:NF014056.2
COORDINATES: protein motif:HMM:NF024635.2
COORDINATES: protein motif:HMM:NF021439.2
COORDINATES: protein motif:HMM:NF013989.2
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003214.0
COORDINATES: similar to AA sequence:RefSeq:WP_018194693.1
COORDINATES: protein motif:HMM:TIGR03684.1
COORDINATES: protein motif:HMM:NF001924.0
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: protein motif:HMM:NF016984.2
COORDINATES: protein motif:HMM:NF014000.2
GO:0047294 - phosphoglycerol geranylgeranyltransferase activity [Evidence IEA]
GO:0006650 - glycerophospholipid metabolic process [Evidence IEA]
geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: protein motif:HMM:NF013056.2
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015205 - nucleobase transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013347.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF013795.2
COORDINATES: protein motif:HMM:NF013663.2
GO:0003951 - NAD+ kinase activity [Evidence IEA]
GO:0006741 - NADP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016083.2
COORDINATES: protein motif:HMM:NF016765.2
COORDINATES: protein motif:HMM:NF004417.0
COORDINATES: protein motif:HMM:NF009676.0
GO:0030163 - protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014558244.1
COORDINATES: protein motif:HMM:NF013586.2
COORDINATES: protein motif:HMM:NF001667.0
COORDINATES: protein motif:HMM:TIGR00004.1
GO:0019239 - deaminase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: protein motif:HMM:NF012880.2
thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha
COORDINATES: protein motif:HMM:NF006667.0
alpha-ketoacid dehydrogenase subunit beta
pyridoxal phosphate-dependent aminotransferase
COORDINATES: protein motif:HMM:TIGR01350.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025895.2
COORDINATES: protein motif:HMM:NF009007.0
GO:0008804 - carbamate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017959.2
COORDINATES: protein motif:HMM:TIGR02274.1
GO:0008829 - dCTP deaminase activity [Evidence IEA]
GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF008925.0
COORDINATES: protein motif:HMM:NF003302.0
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014558015.1
COORDINATES: protein motif:HMM:NF040257.1
COORDINATES: protein motif:HMM:NF016816.2
COORDINATES: similar to AA sequence:RefSeq:WP_018194466.1
COORDINATES: protein motif:HMM:TIGR00258.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0046128 - purine ribonucleoside metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00728.1
GO:0035673 - oligopeptide transmembrane transporter activity [Evidence IEA]
GO:0006857 - oligopeptide transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF024772.2
COORDINATES: protein motif:HMM:NF009668.0
GO:0051920 - peroxiredoxin activity [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
GO:0098869 - cellular oxidant detoxification [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03026.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00148.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01475.1
GO:0008412 - 4-hydroxybenzoate octaprenyltransferase activity [Evidence IEA]
GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021490.2
COORDINATES: protein motif:HMM:NF014028.2
COORDINATES: protein motif:HMM:NF004723.0
COORDINATES: protein motif:HMM:NF026240.2
COORDINATES: protein motif:HMM:NF001100.0
GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02179.1
COORDINATES: protein motif:HMM:NF014794.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
PLP-dependent aminotransferase family protein
COORDINATES: protein motif:HMM:TIGR00499.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00408.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013415.2
COORDINATES: protein motif:HMM:TIGR03676.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: protein motif:HMM:NF001658.0
COORDINATES: protein motif:HMM:NF002096.0
stress response translation initiation inhibitor YciH
COORDINATES: protein motif:HMM:NF012365.2
produces ATP from ADP in the presence of a proton gradient across the membrane; the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00309.1
GO:0016471 - vacuolar proton-transporting V-type ATPase complex [Evidence IEA]
GO:0008553 - P-type proton-exporting transporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF003235.0
COORDINATES: protein motif:HMM:NF003220.0
COORDINATES: protein motif:HMM:NF014092.2
COORDINATES: protein motif:HMM:NF013647.2
GO:0033179 - proton-transporting V-type ATPase, V0 domain [Evidence IEA]
GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
V-type ATPase 116kDa subunit family protein
COORDINATES: protein motif:HMM:NF016362.2
COORDINATES: protein motif:HMM:TIGR02170.1
GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF020334.2
COORDINATES: protein motif:HMM:NF021421.2
COORDINATES: protein motif:HMM:NF002318.0
preprotein translocase subunit Sec61beta
COORDINATES: similar to AA sequence:RefSeq:WP_011998398.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]; GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
fructose-1,6-bisphosphate aldolase/phosphatase
COORDINATES: protein motif:HMM:TIGR03399.1
GO:0003963 - RNA-3'-phosphate cyclase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014557807.1
COORDINATES: protein motif:HMM:TIGR03634.1
archaeal proteasome endopeptidase complex subunit beta
COORDINATES: protein motif:HMM:NF013225.2
GO:0016874 - ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012584.2
COORDINATES: protein motif:HMM:NF025042.2
COORDINATES: protein motif:HMM:TIGR02076.1
COORDINATES: protein motif:HMM:NF023395.2
COORDINATES: protein motif:HMM:TIGR00284.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012673.2
COORDINATES: protein motif:HMM:TIGR00392.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012993.2
carbon-nitrogen hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018193940.1
COORDINATES: protein motif:HMM:TIGR01251.1
GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004438.0
COORDINATES: protein motif:HMM:NF002207.0
COORDINATES: similar to AA sequence:RefSeq:WP_018193920.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0140662 - ATP-dependent protein folding chaperone [Evidence IEA]
COORDINATES: protein motif:HMM:NF014664.2
GO:0051920 - peroxiredoxin activity [Evidence IEA]
carboxymuconolactone decarboxylase family protein
COORDINATES: protein motif:HMM:TIGR02504.1
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
adenosylcobalamin-dependent ribonucleoside-diphosphate reductase
COORDINATES: protein motif:HMM:NF024921.2
COORDINATES: protein motif:HMM:TIGR00111.1
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021562.2
COORDINATES: protein motif:HMM:TIGR01188.1
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: protein motif:HMM:TIGR00143.1
GO:0003998 - acylphosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02124.1
hydrogenase expression/formation protein HypE
COORDINATES: protein motif:HMM:NF013611.2
HypC/HybG/HupF family hydrogenase formation chaperone
COORDINATES: protein motif:HMM:TIGR00075.1
GO:0016530 - metallochaperone activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF028488.2
4Fe-4S dicluster domain-containing protein
COORDINATES: protein motif:HMM:NF012402.2
COORDINATES: protein motif:HMM:NF013242.2
NADH-quinone oxidoreductase subunit NuoB
COORDINATES: protein motif:HMM:NF012592.2
nickel-dependent hydrogenase large subunit
COORDINATES: protein motif:HMM:NF013621.2
COORDINATES: protein motif:HMM:TIGR00522.1
GO:0004164 - diphthine synthase activity [Evidence IEA]
GO:0017183 - peptidyl-diphthamide biosynthetic process from peptidyl-histidine [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03336.1
GO:0043805 - indolepyruvate ferredoxin oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00446.1
COORDINATES: protein motif:HMM:NF012478.2
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00414.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013991.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0046917 - triphosphoribosyl-dephospho-CoA synthase activity [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
triphosphoribosyl-dephospho-CoA synthase
COORDINATES: protein motif:HMM:NF016312.2
COORDINATES: protein motif:HMM:NF014165.2
COORDINATES: protein motif:HMM:NF001484.0
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: protein motif:HMM:NF001452.0
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: protein motif:HMM:TIGR00745.1
COORDINATES: protein motif:HMM:NF013672.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:NF025017.2
COORDINATES: similar to AA sequence:RefSeq:WP_020268885.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00432.2
GO:0016763 - pentosyltransferase activity [Evidence IEA]
tRNA guanosine(15) transglycosylase TgtA
COORDINATES: protein motif:HMM:NF028302.2
COORDINATES: protein motif:HMM:NF026244.2
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: protein motif:HMM:NF013219.2
COORDINATES: protein motif:HMM:NF014752.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018193718.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: protein motif:HMM:NF015409.2
COORDINATES: protein motif:HMM:NF026160.2
7-cyano-7-deazaguanine tRNA-ribosyltransferase (tRNA-guanine transglycosylase)
GO:0016831 - carboxy-lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016310.2
aconitase X catalytic domain-containing protein
COORDINATES: protein motif:HMM:NF014091.2
COORDINATES: protein motif:HMM:NF014007.2
energy-coupling factor ABC transporter permease
COORDINATES: protein motif:HMM:NF024588.2
COORDINATES: protein motif:HMM:NF014433.2
COORDINATES: protein motif:HMM:NF014598.2
COORDINATES: protein motif:HMM:TIGR03675.1
COORDINATES: protein motif:HMM:TIGR00264.2
nascent polypeptide-associated complex protein
COORDINATES: protein motif:HMM:NF027889.2
COORDINATES: protein motif:HMM:NF020014.2
COORDINATES: protein motif:HMM:NF003114.0
CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase
COORDINATES: protein motif:HMM:NF003062.0
translation initiation factor IF-2 subunit alpha
COORDINATES: protein motif:HMM:NF001629.0
COORDINATES: similar to AA sequence:RefSeq:WP_018193911.1
COORDINATES: protein motif:HMM:NF014011.2
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
DNA primase small subunit domain-containing protein
COORDINATES: protein motif:HMM:NF002221.0
COORDINATES: protein motif:HMM:TIGR01384.1
GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF025040.2
GO:0046983 - protein dimerization activity [Evidence IEA]
RpoL/Rpb11 RNA polymerase subunit family protein
COORDINATES: protein motif:HMM:NF021368.2
COORDINATES: protein motif:HMM:NF034126.3
exosome complex RNA-binding protein Csl4
COORDINATES: protein motif:HMM:TIGR00322.1
GO:0043364 - glycyl-radical enzyme activating activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015557.2
COORDINATES: similar to AA sequence:RefSeq:WP_018193900.1
COORDINATES: protein motif:HMM:NF003303.0
COORDINATES: protein motif:HMM:NF015812.2
COORDINATES: protein motif:HMM:NF016787.2
COORDINATES: protein motif:HMM:TIGR00755.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: protein motif:HMM:TIGR00537.1
COORDINATES: protein motif:HMM:NF012797.2
GO:0003723 - RNA binding [Evidence IEA]; GO:0008173 - RNA methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01213.2
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO:0031119 - tRNA pseudouridine synthesis [Evidence IEA]
tRNA pseudouridine(54/55) synthase Pus10
COORDINATES: protein motif:HMM:NF012662.2
signal recognition particle protein Srp54
COORDINATES: similar to AA sequence:RefSeq:WP_018193567.1
COORDINATES: nucleotide motif:Rfam:14.4:RF02540
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF01959
COORDINATES: protein motif:HMM:NF002010.0
COORDINATES: protein motif:HMM:NF013530.2
COORDINATES: protein motif:HMM:TIGR01091.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019887.2
COORDINATES: protein motif:HMM:NF013706.2
fumarylacetoacetate hydrolase family protein
COORDINATES: protein motif:HMM:NF003269.0
COORDINATES: protein motif:HMM:NF013994.2
COORDINATES: protein motif:HMM:NF013993.2
GO:0004526 - ribonuclease P activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF014013.2
GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00306.2
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: protein motif:HMM:TIGR00196.1
bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
COORDINATES: protein motif:HMM:NF010335.0
geranylgeranylglycerol-phosphate geranylgeranyltransferase
COORDINATES: protein motif:HMM:NF026297.2
winged helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF040854.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018194011.1
COORDINATES: protein motif:HMM:NF002291.0
nicotinamide mononucleotide deamidase-related protein
COORDINATES: similar to AA sequence:RefSeq:WP_018194156.1
GO:0004372 - glycine hydroxymethyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0070905 - serine binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0019264 - glycine biosynthetic process from serine [Evidence IEA]
COORDINATES: protein motif:HMM:NF001687.0
COORDINATES: protein motif:HMM:NF024605.2
COORDINATES: protein motif:HMM:TIGR03671.1
COORDINATES: protein motif:HMM:TIGR02258.1
GO:0008664 - 2'-5'-RNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014076.2
COORDINATES: protein motif:HMM:NF041155.1
GO:0140737 - encapsulin nanocompartment [Evidence IEA]
family 1 encapsulin nanocompartment shell protein
COORDINATES: protein motif:HMM:NF012512.2
COORDINATES: protein motif:HMM:TIGR00089.1
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase
transcriptional regulator consisting of an HTH domain fused to a Zn-ribbon
COORDINATES: similar to AA sequence:RefSeq:WP_018193756.1
COORDINATES: similar to AA sequence:RefSeq:WP_014557500.1
COORDINATES: protein motif:HMM:NF016982.2
tRNA(Met) cytidine acetyltransferase TmcA
COORDINATES: protein motif:HMM:TIGR00342.1
GO:0140741 - tRNA U4 sulfurtransferase [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018193561.1
COORDINATES: protein motif:HMM:NF009687.0
COORDINATES: protein motif:HMM:TIGR00318.1
COORDINATES: protein motif:HMM:TIGR01292.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF041080.1
GO:0016628 - oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor [Evidence IEA]
digeranylgeranylglycerophospholipid reductase
COORDINATES: protein motif:HMM:NF017933.2
COORDINATES: protein motif:HMM:TIGR01979.1
COORDINATES: protein motif:HMM:NF006330.0
COORDINATES: similar to AA sequence:RefSeq:WP_018194751.1
COORDINATES: protein motif:HMM:TIGR00041.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
Lrp/AsnC family transcriptional regulator
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: protein motif:HMM:TIGR01487.1
GO:0008967 - phosphoglycolate phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013528.2
COORDINATES: similar to AA sequence:RefSeq:WP_018194241.1
COORDINATES: similar to AA sequence:RefSeq:WP_018193743.1
COORDINATES: protein motif:HMM:NF016048.2
COORDINATES: protein motif:HMM:NF002305.0
COORDINATES: protein motif:HMM:TIGR00418.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006450 - regulation of translational fidelity [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: protein motif:HMM:NF013584.2
COORDINATES: protein motif:HMM:NF004012.0
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: protein motif:HMM:NF013594.2
COORDINATES: protein motif:HMM:NF015170.2
COORDINATES: protein motif:HMM:NF024938.2
COORDINATES: protein motif:HMM:NF003217.0
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
Glu-tRNA(Gln) amidotransferase subunit GatD
COORDINATES: protein motif:HMM:NF003107.0
Glu-tRNA(Gln) amidotransferase subunit GatE
COORDINATES: protein motif:HMM:NF011121.0
functions along with aFIB and aL7a; guides 2'-O-methylation of ribose to specific sites in RNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.
C/D box methylation guide ribonucleoprotein complex aNOP56 subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018193741.1
fibrillarin-like rRNA/tRNA 2'-O-methyltransferase
COORDINATES: protein motif:HMM:NF014002.2
COORDINATES: protein motif:HMM:NF015239.2
GO:0017111 - ribonucleoside triphosphate phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014103.2
COORDINATES: similar to AA sequence:RefSeq:WP_020268938.1
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00307.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF014032.2
GO:0048500 - signal recognition particle [Evidence IEA]
GO:0008312 - 7S RNA binding [Evidence IEA]
GO:0006614 - SRP-dependent cotranslational protein targeting to membrane [Evidence IEA]
signal recognition particle subunit SRP19/SEC65 family protein
COORDINATES: protein motif:HMM:TIGR00653.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015947.2
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012600.2
COORDINATES: protein motif:HMM:NF016308.2
COORDINATES: protein motif:HMM:NF008957.0
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01048.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: protein motif:HMM:NF015999.2
COORDINATES: protein motif:HMM:NF013227.2
GO:0008483 - transaminase activity [Evidence IEA]
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: protein motif:HMM:NF037640.2
COORDINATES: protein motif:HMM:NF013434.2
GO:0071949 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012364.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
DNA polymerase domain-containing protein
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03875.1
COORDINATES: protein motif:HMM:TIGR01209.1
GO:0016070 - RNA metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017957.2
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: protein motif:HMM:NF014653.2
COORDINATES: similar to AA sequence:RefSeq:WP_018193528.1
COORDINATES: protein motif:HMM:NF006331.0
COORDINATES: protein motif:HMM:NF006811.0
COORDINATES: protein motif:HMM:NF003268.0
COORDINATES: protein motif:HMM:NF002316.0
COORDINATES: protein motif:HMM:NF002258.1
COORDINATES: protein motif:HMM:TIGR00323.1
COORDINATES: protein motif:HMM:NF013900.2
COORDINATES: protein motif:HMM:TIGR00293.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00064.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: protein motif:HMM:NF014087.2
COORDINATES: protein motif:HMM:NF013292.2
COORDINATES: protein motif:HMM:NF015545.2
COORDINATES: protein motif:HMM:NF001617.0
COORDINATES: protein motif:HMM:TIGR00327.1
GO:0006886 - intracellular protein transport [Evidence IEA]
protein translocase SEC61 complex subunit gamma
COORDINATES: protein motif:HMM:TIGR00405.1
COORDINATES: protein motif:HMM:NF012519.2
COORDINATES: protein motif:HMM:NF003244.0
COORDINATES: protein motif:HMM:NF003095.0
COORDINATES: similar to AA sequence:RefSeq:WP_018194472.1
COORDINATES: protein motif:HMM:TIGR03683.1
COORDINATES: protein motif:HMM:NF037435.2
metal ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF013465.2
zinc ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013143.2
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO:0030001 - metal ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF005097.0
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF005012.1
GO:1990204 - oxidoreductase complex [Evidence IEA]
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
NADH-quinone oxidoreductase subunit B family protein
COORDINATES: protein motif:HMM:NF026048.2
COORDINATES: protein motif:HMM:NF012566.2
COORDINATES: protein motif:HMM:NF012581.2
proton-conducting transporter membrane subunit
COORDINATES: protein motif:HMM:NF008556.0
COORDINATES: protein motif:HMM:NF012373.2
COORDINATES: protein motif:HMM:NF024644.2
COORDINATES: protein motif:HMM:NF012602.2
COORDINATES: protein motif:HMM:TIGR00072.1
COORDINATES: protein motif:HMM:NF003161.0
COORDINATES: protein motif:HMM:NF014052.2
COORDINATES: protein motif:HMM:NF017373.2
COORDINATES: protein motif:HMM:NF001911.0
COORDINATES: protein motif:HMM:NF014010.2
COORDINATES: protein motif:HMM:NF020287.2
COORDINATES: protein motif:HMM:NF014094.2
biotin/lipoate A/B protein ligase family protein
COORDINATES: protein motif:HMM:NF021921.2
lipoate protein ligase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012314.2
COORDINATES: similar to AA sequence:RefSeq:WP_018194588.1
COORDINATES: protein motif:HMM:NF012656.2
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: protein motif:HMM:NF013200.2
electron transfer flavoprotein subunit beta/FixA family protein
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
electron transfer flavoprotein subunit alpha/FixB family protein
COORDINATES: protein motif:HMM:NF003319.0
COORDINATES: protein motif:HMM:NF033788.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
metalloregulator ArsR/SmtB family transcription factor
iron ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF014693.2
COORDINATES: protein motif:HMM:NF011396.0
COORDINATES: protein motif:HMM:NF011463.0
COORDINATES: protein motif:HMM:TIGR03722.2
GO:0061711 - N(6)-L-threonylcarbamoyladenine synthase activity [Evidence IEA]
KEOPS complex N(6)-L-threonylcarbamoyladenine synthase Kae1
COORDINATES: protein motif:HMM:NF001669.0
COORDINATES: protein motif:HMM:NF013450.2
COORDINATES: protein motif:HMM:TIGR00291.1
COORDINATES: protein motif:HMM:NF003181.1
GO:0000178 - exosome (RNase complex) [Evidence IEA]
exosome complex RNA-binding protein Rrp4
COORDINATES: protein motif:HMM:TIGR02065.1
COORDINATES: protein motif:HMM:NF003282.1
COORDINATES: protein motif:HMM:NF003058.0
COORDINATES: protein motif:HMM:NF011470.1
COORDINATES: protein motif:HMM:TIGR02338.1
COORDINATES: similar to AA sequence:RefSeq:WP_018194176.1
COORDINATES: protein motif:HMM:NF012717.2
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012549.2
COORDINATES: protein motif:HMM:NF004739.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF004741.0
NADH-quinone oxidoreductase subunit NuoH
COORDINATES: protein motif:HMM:NF024634.2
COORDINATES: protein motif:HMM:NF012709.2
COORDINATES: protein motif:HMM:NF012636.2
COORDINATES: protein motif:HMM:NF003229.0
COORDINATES: similar to AA sequence:RefSeq:WP_018193552.1
COORDINATES: similar to AA sequence:RefSeq:WP_018193625.1
COORDINATES: protein motif:HMM:TIGR04190.1
TIGR04190 family B12-binding domain/radical SAM domain protein
COORDINATES: protein motif:HMM:NF001623.0
COORDINATES: protein motif:HMM:NF013209.2
COORDINATES: similar to AA sequence:RefSeq:WP_018194828.1
COORDINATES: protein motif:HMM:NF016724.2
COORDINATES: protein motif:HMM:NF040949.1
COORDINATES: protein motif:HMM:NF017704.2
COORDINATES: protein motif:HMM:TIGR00040.1
COORDINATES: similar to AA sequence:RefSeq:WP_018194846.1
COORDINATES: protein motif:HMM:NF014826.2
COORDINATES: protein motif:HMM:NF014100.2
COORDINATES: protein motif:HMM:NF014047.2
COORDINATES: protein motif:HMM:NF021475.2
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00290.1
COORDINATES: protein motif:HMM:NF037785.2
COORDINATES: protein motif:HMM:NF001753.0