Planktothrix agardhii strain No.976 plasmid p3.
type: Entry
definition: Planktothrix agardhii strain No.976 plasmid p3.
sequence version: NZ_LR882955.1
sequence date: 2023-05-23
sequence: sequence
division: CON
label: NZ_LR882955.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMEA7326078
keyword: RefSeq
source: Planktothrix agardhii
organism: Planktothrix agardhii
taxonomy: Bacteria; Cyanobacteriota; Cyanophyceae; Oscillatoriophycideae; Oscillatoriales; Microcoleaceae; Planktothrix.
reference: 1
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR882955.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/22/2023 21:11:23\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,494\nCDSs (total) :: 4,437\nGenes (coding) :: 4,349\nCDSs (with protein) :: 4,349\nGenes (RNA) :: 57\nrRNAs :: 3, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 4, 4 (5S, 16S, 23S)\ntRNAs :: 42\nncRNAs :: 4\nPseudo Genes (total) :: 88\nCDSs (without protein) :: 88\nPseudo Genes (ambiguous residues) :: 0 of 88\nPseudo Genes (frameshifted) :: 18 of 88\nPseudo Genes (incomplete) :: 72 of 88\nPseudo Genes (internal stop) :: 9 of 88\nPseudo Genes (multiple problems) :: 10 of 88\nCRISPR Arrays :: 4\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000155
sequence length: 37841
topology: linear
so has quality: SO_0000987
location: 1..37841
location: region:1-37841:1
RO_0002162: 1160

NZ_LR882955
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMEA7326078
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
author: Blom, J.
journal: Submitted (29-SEP-2020) JLU, JLU, Justus-Liebig-University Giessen, Bioinformatics and Systems Biology, Heinrich-Buff-Ring 58, 35392 Giessen, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37841:1
position: 37841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-37841:1:source
so part of: sequence
organism: Planktothrix agardhii
mol type: genomic DNA
strain: No.976
plasmid: p3

1160
type: Taxonomy
SIO_000068: taxonomy

NMG88_RS21890
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
gene: cas1
locus tag: NMG88_RS21890
so part of: sequence
location: complement(<1..749)
location: region:1-749:-1
so has part: feature:1-749:-1:exon
subclass of: SO_0000010

77290515
type: Gene
SIO_000068: ncbigene

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:749:-1
position: 749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-749:-1:exon

NMG88_RS21890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
gene: cas1
locus tag: NMG88_RS21890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015783161.1
GO function: GO:0004520 - DNA endonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated endonuclease Cas1
translation: MSILYVTQPEAILSKTYEAFTIAMKQEDGSWKKQSVPAQTVEQVVLMGNPQVTGDALTYALELGMPVHYLTSFGKYLGSALPGYSRNGALRLAQHELYRDTERRLELVKAIVSAKIQNQSTLLYRHLAETPLKDHKKLVFQKATLDEVRGVEGIAAKDYFAQWSTLLKEPWSFPGRNRRPPTDPVNALLSFAYGLLRVQVTAAVHIVGLDPYIGYLHEVSRGQPAMVLDLMEEFRPLVADSLVLSVLHKR
SIO_010081: NMG88_RS21890
subclass of: SO_0000673
so part of: NMG88_RS21890
location: complement(<1..749)
location: region:1-749:-1
so has part: feature:1-749:-1:exon

WP_254035855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-749:-1:exon

NMG88_RS21895
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
gene: cas4
locus tag: NMG88_RS21895
old locus tag: NO976_04370
so part of: sequence
location: complement(756..1337)
location: region:756-1337:-1
so has part: feature:756-1337:-1:exon
subclass of: SO_0000010

77290516
type: Gene
SIO_000068: ncbigene

position:756:-1
position: 756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1337:-1
position: 1337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:756-1337:-1:exon

NMG88_RS21895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
gene: cas4
locus tag: NMG88_RS21895
old locus tag: NO976_04370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012627892.1
GO function: GO:0004518 - nuclease activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated protein Cas4
translation: MKQYLQLAYLNAWEYCPRRFYLEYQLGEMEDNEHIIIGRYLHENINEEGISIEGDTVIHRQQWVWSEDLKVSGIIDAVEEREGQLIPLEYKKGKMAQHLNDHFQLCAAALCLEERTGKEIPDGEIFYHGNRRRQQVKFTPQLRQMTVDAIAQAHQTAAGKIPFPIENSKKCQACSLMGICLPFEVKTLIRQGV
SIO_010081: NMG88_RS21895
subclass of: SO_0000673
so part of: NMG88_RS21895
location: complement(756..1337)
location: region:756-1337:-1
so has part: feature:756-1337:-1:exon

WP_254035856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:756-1337:-1:exon

NMG88_RS21900
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
gene: cas6
locus tag: NMG88_RS21900
old locus tag: NO976_04371
so part of: sequence
location: complement(1418..2431)
location: region:1418-2431:-1
so has part: feature:1418-2431:-1:exon
subclass of: SO_0000010

77290517
type: Gene
SIO_000068: ncbigene

position:1418:-1
position: 1418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2431:-1
position: 2431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1418-2431:-1:exon

NMG88_RS21900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
gene: cas6
locus tag: NMG88_RS21900
old locus tag: NO976_04371
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015217586.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6
translation: MTFTDEINSTIAGLNIVLRPSNKTNTTPLTTWLSDLEFSPTWIPLAKHNGVHKVLAALPDCRKYPELLQQIFQQISLGTVLEWQGKSFELTGVEIDNHDLHVLEIAVFASEILPYTLGRAIHAQCFQWLTNTSPDLAEKLHFQDPLPLTLATKPSPSRNQIYIRIGILQRQLFAPLLLGMSRDIGNDITLTKIPCRLGKWIDIKHSVSYESLMQVPAKNIIELEFLSPTSFKQGERVQPFPLPELVFSNLLRRWNSLAPEAYRLPTVEWQGFICAYDLKTVALKMKSDPEIGAKGWIRYQFLDPQQAQIATTLSHFAGFAGVGRKTSMGMGQTKINQ
SIO_010081: NMG88_RS21900
subclass of: SO_0000673
so part of: NMG88_RS21900
location: complement(1418..2431)
location: region:1418-2431:-1
so has part: feature:1418-2431:-1:exon

WP_254035857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1418-2431:-1:exon

NMG88_RS21905
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS21905
old locus tag: NO976_04372
so part of: sequence
location: complement(2409..3143)
location: region:2409-3143:-1
so has part: feature:2409-3143:-1:exon
subclass of: SO_0000010

77290518
type: Gene
SIO_000068: ncbigene

position:2409:-1
position: 2409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3143:-1
position: 3143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2409-3143:-1:exon

NMG88_RS21905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS21905
old locus tag: NO976_04372
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015217585.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKQSSKSKESDFWLTVSYQPVSLFSLKRSDATSMAARSNLVPTPYAIKMALLKVLLEGEGKTNLTNFDRWIKGEFSWIRDLQIFIQPPERLVVNRNGYKLRYYDQTADKADKTRPTVPMQDGFVFREWLYLEGKLQICCGPTSRCLELKQLLPQINYFGKRGCFFQYLPEETQETVVPQFQPRPEQSFVIQPMDDLGSKTTFNKINPYSNDKAQLDKDRVISPGLLPLQLIASSAKYDIYRRN
SIO_010081: NMG88_RS21905
subclass of: SO_0000673
so part of: NMG88_RS21905
location: complement(2409..3143)
location: region:2409-3143:-1
so has part: feature:2409-3143:-1:exon

WP_254035858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2409-3143:-1:exon

NMG88_RS21910
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS21910
old locus tag: NO976_04373
so part of: sequence
location: complement(3124..4098)
location: region:3124-4098:-1
so has part: feature:3124-4098:-1:exon
subclass of: SO_0000010

77290519
type: Gene
SIO_000068: ncbigene

position:3124:-1
position: 3124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4098:-1
position: 4098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3124-4098:-1:exon

NMG88_RS21910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS21910
old locus tag: NO976_04373
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017747903.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DevR family CRISPR-associated autoregulator
translation: MTNKTFPVYSISISGLISWQLHALNNEGNEGNQSLTRRYYIVEKGDPEPKFVNGVSGDMIKHIQGEHLHRVAIESGLSLSQGGQQLNPDRIGYDIELAEKQKTSLFAEGETDLSSKTAKVLQLCAISDLQGFMVTEKKGQTLKRESVIEFGAVVGLPSFVKTQSYFHAKYGTNNPTPYNVQISSGLYATVLNIEAFRIGYNPHSFQYVIDGIERKKRLDALLKSVLYTYLQPNGAKRNTNLPHPDHFKGVITFTTRRCPAPMMSALEETYIHQIESISNTLNRMNGEGSVHLLTFESMAEFAKRIEELIAISQPWESENAEAIE
SIO_010081: NMG88_RS21910
subclass of: SO_0000673
so part of: NMG88_RS21910
location: complement(3124..4098)
location: region:3124-4098:-1
so has part: feature:3124-4098:-1:exon

WP_254035859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3124-4098:-1:exon

NMG88_RS21915
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS21915
old locus tag: NO976_04374
so part of: sequence
location: complement(4112..5932)
location: region:4112-5932:-1
so has part: feature:4112-5932:-1:exon
subclass of: SO_0000010

77290520
type: Gene
SIO_000068: ncbigene

position:4112:-1
position: 4112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5932:-1
position: 5932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4112-5932:-1:exon

NMG88_RS21915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS21915
old locus tag: NO976_04374
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015217583.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTEALFIPKQFNTYADTFVLLGLAQLVEDALRRTQQREEMQLIDEGTYYQIQLARPLNLEALAQLDYTNPFRPVKGQKTDWSQMPAETPFFDVVQEVEKRKLYQQYRYQTGGKTQWTEEAPKPPDPRTQNGAILVSMRHDRNHNSLWQESWKLKEHYGWLVASLCQVLSQNPLSSQSPWSEQVADIFQSKTGVSLPENASAVKIYFPTSVQGVNRTKADSNKVDSQKIDWLTLWLIANGLFQFAISERIKIAENLYDWRVVVLEPKDISLQKYCGILNQLRQFNPPGGGHGIARFDAELVLKLCQQLLENHTAQAQEKPENPFNFLGKSVNDFVGEFRGTHFGSKGQVYGVKELFTLGLPGWIIPNNYQDLLDYLDVIKEHISVIVTLSAEEGHSELLAAYRDFITGTSFRQFFRFQVIYADYVVKQLANPHTKSPRLFSVNGLNIMTKKDSNFANITKDPSFLRIAKAINQATVYAGEISTKDGGKKQLDWQRQYGLAQLLSSQSGSKKDFICAITDFLGKYEHENLRLSEKYLKEGKRLMRVQPYKEDLDRLIELIDEFDTVLVANLLIAYGYAKWNKSHDSSQQETSDNTIKSDKNLETSEEE
SIO_010081: NMG88_RS21915
subclass of: SO_0000673
so part of: NMG88_RS21915
location: complement(4112..5932)
location: region:4112-5932:-1
so has part: feature:4112-5932:-1:exon

WP_254035860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4112-5932:-1:exon

NMG88_RS21920
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
gene: cas3
locus tag: NMG88_RS21920
old locus tag: NO976_04375
so part of: sequence
location: complement(6035..8083)
location: region:6035-8083:-1
so has part: feature:6035-8083:-1:exon
subclass of: SO_0000010

77290521
type: Gene
SIO_000068: ncbigene

position:6035:-1
position: 6035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8083:-1
position: 8083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6035-8083:-1:exon

NMG88_RS21920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
gene: cas3
locus tag: NMG88_RS21920
old locus tag: NO976_04375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020479980.1
GO function: GO:0004386 - helicase activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated helicase Cas3'
translation: MEIIEVSPADLIEIEGNRHRTFQAISHPLTADVILNDIQTCDRQRVIIICNTVSQAQGLFQDLTQLNQDNTLTITLLHSRFLPEHRAQKEAEIQAKFSKNRLDNGQCHVLISTQVIEAGLNITCEVMHTELCPMNSLLQRAGRCARFPEEQGEVYVYWQILINPEHQELSQQDFNPEAEVEELQTPEKKSFLPYDKELCQLTWQVVQAHTQSNKVHQTVSFEVEQSWINQVHGADDLLQAEKRKNNRAEFEQNFTGAILRGERDKADKLIRFVDSRSLFVWNEPILIDFDDSVQIDPKKLLSFSVPITTLCKVWQEVQNLGYEIDWVFKRIEHPKRKTPETYTQPICTPIRSYNDLKNSFQLLVNPRYVYYNEQIGLLIKIDEQGNNFNSPNKPLKSMVSEYQYRMDTYVGHLGCMWQCWQHPFQTKVLKNGAWIEIKYNSVRDELLETGGQFIQQKIFPNATLTQTQALFQYLVLLAIFTHDLGKLQQQWQTVMRGWQTRAYQDFNSKPPKSYLLAHTDYNPEDEQQKQALKSYEKQHKRPNHAVESAFLAQYILQDTLVPLLKNEFNADSEQISGLAYSIILSAGRHHSAWAKGWENKDINNKEIILHPEAQKVIANSWQHLTRGLPNILPLPRQTPNLSLSRYPIQKLDLMWFSTWEYLQLYWLVVRALRLCDQRSVQL
SIO_010081: NMG88_RS21920
subclass of: SO_0000673
so part of: NMG88_RS21920
location: complement(6035..8083)
location: region:6035-8083:-1
so has part: feature:6035-8083:-1:exon

WP_254035861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6035-8083:-1:exon

NMG88_RS21925
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS21925
old locus tag: NO976_04376
so part of: sequence
location: complement(8070..8693)
location: region:8070-8693:-1
so has part: feature:8070-8693:-1:exon
subclass of: SO_0000010

77290522
type: Gene
SIO_000068: ncbigene

position:8070:-1
position: 8070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8693:-1
position: 8693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8070-8693:-1:exon

NMG88_RS21925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS21925
old locus tag: NO976_04376
inference: COORDINATES: protein motif:HMM:NF012492.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MTLNHHFHTLTGFPPRQFQLETIAHLLNRQDVLLRAPTGSGKTETAIAPFLFAKPLKLDFPNKLIYVVPLRTLANSLRQRTETLINNWSTHYPLSRPLTVTLQTGENPEDPRFEGDIIFCTIDQMLSSFLNIPYSVGRGSANVNAAAIFASYLVFDELHLLDPDRSFTTVLKLLQQVKGISPFLLMTATLTDEVSQQIQSLINNGNN
SIO_010081: NMG88_RS21925
subclass of: SO_0000673
so part of: NMG88_RS21925
location: complement(8070..8693)
location: region:8070-8693:-1
so has part: feature:8070-8693:-1:exon

WP_254035862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8070-8693:-1:exon

NMG88_RS21930
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS21930
old locus tag: NO976_04377
so part of: sequence
location: complement(8718..10988)
location: region:8718-10988:-1
so has part: feature:8718-10988:-1:exon
subclass of: SO_0000010

77290523
type: Gene
SIO_000068: ncbigene

position:8718:-1
position: 8718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10988:-1
position: 10988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8718-10988:-1:exon

NMG88_RS21930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS21930
old locus tag: NO976_04377
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009455311.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR03986 family CRISPR-associated RAMP protein
translation: MNFRHLKEVNNDRKAVAPYNFVELPSKIVKAELECNGKLRDNDRYYSDRHTGTIECTLKTESSLYIRCGLTPTDFSSFGDTTNEKLTPDQRKKKAEFFQYPSNSYPALPGSSLRGMLRTLVEIISFGKMEKVSDQKNFFFRAVAAETDDPLRELYKDCIGNMAKNVKAGYLEFDKNQNKWFVRPAQEIEDQSFIKVKEEDIKDHVPSLILMKEASYIPQYIQISFEVTATSINVSEDLNQYSTNGQIGWLVTSGNMLENMLEKATEREREKLLRKKEGRKYHYIIAEVDHSMKRLEISSDAIRDYREALTKFQKGEEKQFKNNSKNRFDKKKGVIQEGLPIFYCEPEPVTLFGQSPNFRIPYSPNNDGRAASAVDFIPEQIGESDKIDLADAIFGFVRRGKDKQEQLPSEAKKEKREQSRAGRIFISDGQCVANEDDIWLTKETITPQILASPKPTTFQHYLVQTTDEKPNLKHYGSKTVIRGHKLYWHKGDVKTGIQTDASPEEIEKKRSQYTEIKPIKAGVTFEFSINFENLSNVELGTLLWILTLASDNANQLKLLDLDGKEKYCLSLGMGKPLGMGAVTIEKSELILNERSQNKPQQRYTQLFDVNEDNWLTGDRTATADEYKSCVETFERYIIERVDDLDLPEGCTDRKDLRLKDLPRIRMLLAMLSWDFPPVNETRYMEIERTKHPRLGDDPNEYKARRVLPSPLQIKGKGWEDTRRIHNSPVSPSRGGTDSNSEGNNPNPLARPQKPKP
SIO_010081: NMG88_RS21930
subclass of: SO_0000673
so part of: NMG88_RS21930
location: complement(8718..10988)
location: region:8718-10988:-1
so has part: feature:8718-10988:-1:exon

WP_254035863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8718-10988:-1:exon

NMG88_RS21935
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
gene: csx19
locus tag: NMG88_RS21935
old locus tag: NO976_04378
so part of: sequence
location: complement(11001..11588)
location: region:11001-11588:-1
so has part: feature:11001-11588:-1:exon
subclass of: SO_0000010

77290524
type: Gene
SIO_000068: ncbigene

position:11001:-1
position: 11001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11588:-1
position: 11588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11001-11588:-1:exon

NMG88_RS21935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
gene: csx19
locus tag: NMG88_RS21935
old locus tag: NO976_04378
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015217580.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated protein Csx19
translation: MNQELCQTSIENLSEQSLQDWLKQQAKNYHLPYLLAHAEDGVIWGKFEMSTGTLKTAREVFPECNFPELRLNTLQQCRIFGKLGEVLLWNSNGKWRSRLILETKASELITEEQIGLIPESQILWGTEGQENKEYGFTLLSDGSQGLKHAVPLININFEKDDKALKRPVKLEVHHYFCCDSDGVARIFISRLVSIE
SIO_010081: NMG88_RS21935
subclass of: SO_0000673
so part of: NMG88_RS21935
location: complement(11001..11588)
location: region:11001-11588:-1
so has part: feature:11001-11588:-1:exon

WP_254035864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11001-11588:-1:exon

NMG88_RS21940
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS21940
old locus tag: NO976_04379
so part of: sequence
location: complement(11588..13096)
location: region:11588-13096:-1
so has part: feature:11588-13096:-1:exon
subclass of: SO_0000010

77290525
type: Gene
SIO_000068: ncbigene

position:13096:-1
position: 13096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11588-13096:-1:exon

NMG88_RS21940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS21940
old locus tag: NO976_04379
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019487260.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RAMP superfamily CRISPR-associated protein
translation: MIENLQRSDHRLITKRIIIRGILVLDTPTCLGSGDADSPTDLPLLRDSISDRALLTGSSIAGALRNYLHEYEQGYGKSEISQGLATKLFGHLFRYEGDEPKEENQSPLIIDEAISSTIPVIELRDGVKIKSAIGTAEDGAKYDLELLEAGTEFLLNFELLIEKDEADLKKALAIALKGLEKGEISLGMKKRRGFGRCHIEKWQVWEFDLQKHKDRIEWLKFDHWTRELSNKRKSFESIVVALGGGSLKQQIDQRDRLSIHAKFKLATPLLIRSSQDLIQNNRSPDVVHLHSNRKGKLQPIVSGTSLAGVMWHRAERIVNTLGKNLQLVYDLFGIVEGEQAKASRLVIYESVIENTAELVQNRIAIDRFTGGTYHGALFSEQPIFGIEKAEEEKKPKNRKEKSKPPSKNQHIELKLELRDPKEYEIGFLLLLLKDLWTGDLPIGGTSSIGRGRLEGVEATITWQQPEKSEQKWVISQNNGKLKFTEEDKQKLESFVSKFVEEV
SIO_010081: NMG88_RS21940
subclass of: SO_0000673
so part of: NMG88_RS21940
location: complement(11588..13096)
location: region:11588-13096:-1
so has part: feature:11588-13096:-1:exon

WP_254035865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11588-13096:-1:exon

NMG88_RS21945
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS21945
old locus tag: NO976_04380
so part of: sequence
location: complement(13101..14702)
location: region:13101-14702:-1
so has part: feature:13101-14702:-1:exon
subclass of: SO_0000010

77290526
type: Gene
SIO_000068: ncbigene

position:13101:-1
position: 13101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14702:-1
position: 14702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13101-14702:-1:exon

NMG88_RS21945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS21945
old locus tag: NO976_04380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009455314.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAITFTLHTQQPILATSFQGDPNSDVSYQYIPGSMIRGALIGRYLKQNPDIGDDILADTQVRHLFFSGQVRYLNAYLVTKEEHQPRSLPTPRSWFQNKGEEPPMKIYDLSRMELANLDSGISPKPVKQPFCSVNYTDNYTDVILYKEERRINIHNQRHRSKGRSTEAVGEVFRYEALDANQQFQSVILCEEKDKQVLEELLKENDNIWLGGSQSAGYGHIKISGIQFHETLDEIGEKQSLENRIESKYFQITLLSDMILQNDCGQYVVEPPIQLLAELLDIDPEQLQLQKAYMSSTLIGGFNKKWGLPLPQVPAIALGSVFVFQSLSLDLQRVKDLEFYGLGERTVEGFGRVAVNWLHLDESPEFDATLPGSEPGSTDLSKLPTGSKSAKLAKEMAKRLFCQKLDEKLRQKVSRFNIEGNISNSQLSRLMIVARKALNDPELGNKPNLQQVSDLLGNLPSNASDQFEYAKIGNQSIKQPIEQQIKEWIENPSGWIEVSPVTIAGESYNLTKELADKYTLLLIMAIAKKATKE
SIO_010081: NMG88_RS21945
subclass of: SO_0000673
so part of: NMG88_RS21945
location: complement(13101..14702)
location: region:13101-14702:-1
so has part: feature:13101-14702:-1:exon

WP_254035866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13101-14702:-1:exon

NMG88_RS21950
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS21950
old locus tag: NO976_04381
so part of: sequence
location: complement(14699..15397)
location: region:14699-15397:-1
so has part: feature:14699-15397:-1:exon
subclass of: SO_0000010

77290527
type: Gene
SIO_000068: ncbigene

position:14699:-1
position: 14699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15397:-1
position: 15397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14699-15397:-1:exon

NMG88_RS21950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS21950
old locus tag: NO976_04381
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009455315.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RAMP superfamily CRISPR-associated protein
translation: MSNYFINIELLSDTTFGRGDGVAGLIDQEVEHDSYGFPYLRGRTLKGLLSEECDNLLCLIPDPHQHWLNARNSLLGTAGSTIETQSRMHVGDACLPEDLRREVAKQFELEQYRREITLTPTDILSSLTTFRRQTAIDSKEGVAKDKSLRSSRVVLRELCFTAPITLNLKPSDDSEKILALLAVSILALRRIGSGRNRGRGHVKCTLWQRQENQNPEEITTKHLGYFEQETKA
SIO_010081: NMG88_RS21950
subclass of: SO_0000673
so part of: NMG88_RS21950
location: complement(14699..15397)
location: region:14699-15397:-1
so has part: feature:14699-15397:-1:exon

WP_254035867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14699-15397:-1:exon

NMG88_RS21955
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS21955
old locus tag: NO976_04382
so part of: sequence
location: complement(15390..17099)
location: region:15390-17099:-1
so has part: feature:15390-17099:-1:exon
subclass of: SO_0000010

77290528
type: Gene
SIO_000068: ncbigene

position:15390:-1
position: 15390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17099:-1
position: 17099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15390-17099:-1:exon

NMG88_RS21955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS21955
old locus tag: NO976_04382
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007357726.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTEYTATIIDTTGIQPYIFGSNRLRENIGASYLIAEATKQWVKEALIQLGKPFYFPDPELSEQCQESQPEPNAKPYIEDGNLAAEVIYAGGGNAVLLFTSHDDAVDFTKNLSRRVLKKSPGLNLVVAHKKFDFYDKEQPLRNIIDDLMKNELEIKKRQRIPSVPLLGLGVTASCNSTQLPAIGTSDQFDAPKEDKYWVSTEVKYKLKNVRNANEKLEKFFAGVVPDFYEFPLRADHLGRTQDESSYVAVVHADGNSMGDRFQKQSETASTNREYITKMRELSWSVNKIGKDALITVIKTLVNSIQHNSEGGFINWLDTEGQLFSKIELKKNPENGKFYLPFRPLVYGGDDVTFICDGRLGLTLATLFLKEFEKTAVDGEKLTACAGISIVKSHYPFARAYELSESLCGSAKKMVREGEGGFSALDWHIAASGLIGSLGDIRKREYQVNSSKKEKNLTMRPIRLKGEDGEWQNWDDFQAVVREFNIGDDWRDKRNKVIALREVLRKGSDATQQFLHLYRMQELPSFEHTSYDDLKTRGWVDDGKEERVCGYFDAIEAMEFYFPLSGVKHE
SIO_010081: NMG88_RS21955
subclass of: SO_0000673
so part of: NMG88_RS21955
location: complement(15390..17099)
location: region:15390-17099:-1
so has part: feature:15390-17099:-1:exon

WP_254035868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15390-17099:-1:exon

NMG88_RS21960
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS21960
old locus tag: NO976_04383
so part of: sequence
location: complement(17168..17758)
location: region:17168-17758:-1
so has part: feature:17168-17758:-1:exon
subclass of: SO_0000010

77290529
type: Gene
SIO_000068: ncbigene

position:17168:-1
position: 17168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17758:-1
position: 17758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17168-17758:-1:exon

NMG88_RS21960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS21960
old locus tag: NO976_04383
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNESKIIEIPGDIQEIFRNILKWEFDGKEINIQLVKEKHGFKLSQIYEWLNSGWLEDYVMWQVEKIASKYQIQEIKRSLHIQDPEDSSRDQDQFEFDVAFLRGYQLFGISCSMTSKHSLCKEKLFEAYLRAKQLGGDEARVALVSCYEEDTERLKKEISFIVQNSKIEVFGKKDLMNADKFAKKLNLWILSNAGK
SIO_010081: NMG88_RS21960
subclass of: SO_0000673
so part of: NMG88_RS21960
location: complement(17168..17758)
location: region:17168-17758:-1
so has part: feature:17168-17758:-1:exon

WP_254035869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17168-17758:-1:exon

NMG88_RS21965
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS21965
old locus tag: NO976_04384
so part of: sequence
location: 17821..18741
location: region:17821-18741:1
so has part: feature:17821-18741:1:exon
subclass of: SO_0000010

77290530
type: Gene
SIO_000068: ncbigene

position:17821:1
position: 17821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18741:1
position: 18741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17821-18741:1:exon

NMG88_RS21965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS21965
old locus tag: NO976_04384
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015180904.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase family protein
translation: MSKLRDYLDKNPQQAKRLLGMEYEQLIKLIQAAELLEQERRQEQEKAKIRLIKAGGGRHQKLSVEEQILLTLIYLHQMPTFQMLGLQFEVSESTANDIFHNKIKILRELLPASLVEQIKKNESDWEWVEKILLEFELVVDSYEQPMQRPTDNEEQKKYYSGKKKTHTFKNQVIVMPNGKEIVDIAVGYTGATSDLKLWRERREELGNNQKYRGDKAYVGETAINTPYKKPRNQEISLEHREENRLKAKQRIVVEHLIRLIKIYRVASERFRLKSQNYEAVILTVCGLIRWRIGAIVLLSKNCPECF
SIO_010081: NMG88_RS21965
subclass of: SO_0000673
so part of: NMG88_RS21965
location: 17821..18741
location: region:17821-18741:1
so has part: feature:17821-18741:1:exon

WP_042154442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17821-18741:1:exon

NMG88_RS21970
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS21970
old locus tag: NO976_04385
so part of: sequence
location: complement(19095..21185)
location: region:19095-21185:-1
so has part: feature:19095-21185:-1:exon
subclass of: SO_0000010

77290531
type: Gene
SIO_000068: ncbigene

position:19095:-1
position: 19095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21185:-1
position: 21185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19095-21185:-1:exon

NMG88_RS21970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS21970
old locus tag: NO976_04385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012175654.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF262 domain-containing protein
translation: MKATEAKLLAFIKKSPQFVIPIYQRTYSWTEKECRQLWDDILRTGSNDDITTHFFGSIVYIEKGLSQVISQSPLLVIDGQQRLTTVTLLITALANALDDTEPVEGFSQRKLRNYYLLNPEEDGEQHFKLILSQTDKDSLIAILNKSEQPKNYSIRVTENLKLFESLIKDYKDNLATICKGLAKLLVVDVALSRDQDNPQLIFESMNSTGRELSQADLIRNYILMGLEPHLQTKLYEQYWRPMEVEFGQEAYGTQFDSFMRHFLTVKTGNIPNQGEVYEAFKAHARSPDVAKAGVEPMVADLRTFARYYCAMTLGAEPDPDLRLAFQDLRELKVDVAYPFLLELYHDYALGDFPKADFLTAVRLVESYVFRRAICAIPSNSQNKTFATLTKAVKKDRYIESIQAYLLLLPSYRRFPNDEEFKRELQTKDLYQFRSRSYWIRRLENHNRKERVLVDEYTIEHILPQNENLSSAWKTALGGEWQRIQQTYLHTIGNLTLTGYNSEYSDKTFAQKRDMPGGFKESPLKLNQRLGMVEQWDEDAIRQRADRLSTIALDVWAAPKLETSVLECYKSKPAQQGYTIENHPLLVSGPMAEVFKVFRKEVQALDDCVTEEFLKFYVAYKAESNFVDIVPQTKRLRISLNMPFPEINDPKGLCKDVSSVGRWGNGDVEVSLKSLEELPYVIGLVRQSLERQMGGIE
SIO_010081: NMG88_RS21970
subclass of: SO_0000673
so part of: NMG88_RS21970
location: complement(19095..21185)
location: region:19095-21185:-1
so has part: feature:19095-21185:-1:exon

WP_235752391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19095-21185:-1:exon

NMG88_RS21975
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS21975
old locus tag: NO976_04386
so part of: sequence
location: complement(21200..21499)
location: region:21200-21499:-1
so has part: feature:21200-21499:-1:exon
subclass of: SO_0000010

77290532
type: Gene
SIO_000068: ncbigene

position:21200:-1
position: 21200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21499:-1
position: 21499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21200-21499:-1:exon

NMG88_RS21975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS21975
old locus tag: NO976_04386
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016044802.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAYRIKINGVVAVVENGVWTSSTPHYAEILNNMLAIEKMGAIDPDSPFFWLNSPATPDPDWLIATEMAKTFKGTVMDDPLPRAPLIIDGEEIDESEILY
SIO_010081: NMG88_RS21975
subclass of: SO_0000673
so part of: NMG88_RS21975
location: complement(21200..21499)
location: region:21200-21499:-1
so has part: feature:21200-21499:-1:exon

WP_254035870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21200-21499:-1:exon

NMG88_RS21980
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS21980
old locus tag: NO976_04387
so part of: sequence
location: complement(21543..21845)
location: region:21543-21845:-1
so has part: feature:21543-21845:-1:exon
subclass of: SO_0000010

77290533
type: Gene
SIO_000068: ncbigene

position:21543:-1
position: 21543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21845:-1
position: 21845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21543-21845:-1:exon

NMG88_RS21980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS21980
old locus tag: NO976_04387
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009630628.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVTGKLELTLKITEFPTDVQTVENNWKQFTVDCDGRIFTLTVKPKMFKKLEEAQANFPMWVAAIAGKLGEATPDGFVLADPAIQVFEKKPKDSKETAPE
SIO_010081: NMG88_RS21980
subclass of: SO_0000673
so part of: NMG88_RS21980
location: complement(21543..21845)
location: region:21543-21845:-1
so has part: feature:21543-21845:-1:exon

WP_042158671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21543-21845:-1:exon

NMG88_RS21985
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS21985
old locus tag: NO976_04388
so part of: sequence
location: 22005..22379
location: region:22005-22379:1
so has part: feature:22005-22379:1:exon
subclass of: SO_0000010

77290534
type: Gene
SIO_000068: ncbigene

position:22005:1
position: 22005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22379:1
position: 22379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22005-22379:1:exon

NMG88_RS21985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS21985
old locus tag: NO976_04388
inference: COORDINATES: protein motif:HMM:NF039475.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6508 domain-containing protein
translation: MNSQSELSLVKKLTAIASFLPAFQEGKDLSSLAQFVAAAYANNWVSSDINWVEWMKTDEAKKLRDDPTALAKASEHDLACLLTTLIRQERFCEGSLEGAYDSGLLTRILQRAASMLDEMTSKGN
SIO_010081: NMG88_RS21985
subclass of: SO_0000673
so part of: NMG88_RS21985
location: 22005..22379
location: region:22005-22379:1
so has part: feature:22005-22379:1:exon

WP_052369764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22005-22379:1:exon

NMG88_RS21990
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS21990
old locus tag: NO976_04389
so part of: sequence
location: 22523..22969
location: region:22523-22969:1
so has part: feature:22523-22969:1:exon
subclass of: SO_0000010

77290535
type: Gene
SIO_000068: ncbigene

position:22523:1
position: 22523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22969:1
position: 22969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22523-22969:1:exon

NMG88_RS21990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS21990
old locus tag: NO976_04389
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKLMSLVIIFVSLSISTNLVLAQANLSKDTSQDTIAQKAYLEPESLSPIKVKFARGSYKAKVKGYIEPFTIQPYIISSKDNQLFRVQVFPEGVEASIYFVKGNSKKYLGSVSGGVWSGVVPQTGDMVLEILARGETGYSYTAEFTVR
SIO_010081: NMG88_RS21990
subclass of: SO_0000673
so part of: NMG88_RS21990
location: 22523..22969
location: region:22523-22969:1
so has part: feature:22523-22969:1:exon

WP_042158669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22523-22969:1:exon

NMG88_RS21995
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS21995
old locus tag: NO976_04390
so part of: sequence
location: complement(22976..23434)
location: region:22976-23434:-1
so has part: feature:22976-23434:-1:exon
subclass of: SO_0000010

77290536
type: Gene
SIO_000068: ncbigene

position:22976:-1
position: 22976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23434:-1
position: 23434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22976-23434:-1:exon

NMG88_RS21995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS21995
old locus tag: NO976_04390
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLQERADLMKTIHSKNEHWKYKGFEELVLECGREMKPIPAPKYIKHGIPKQCYFNCLELIKKHPDLTYVEGYALGDISFPVSHAWLMNPQGKAIDPTWESGGLCYIGIPFQTQWVLDFLEARKQRGKTDCLSLFESNYLEEFSFLKEGVPQL
SIO_010081: NMG88_RS21995
subclass of: SO_0000673
so part of: NMG88_RS21995
location: complement(22976..23434)
location: region:22976-23434:-1
so has part: feature:22976-23434:-1:exon

WP_042158668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22976-23434:-1:exon

NMG88_RS22000
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS22000
pseudo: true
so part of: sequence
location: 23572..24494
location: region:23572-24494:1
so has part: feature:23572-24494:1:exon
subclass of: SO_0000010

77290537
type: Gene
SIO_000068: ncbigene

position:23572:1
position: 23572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24494:1
position: 24494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23572-24494:1:exon

NMG88_RS22000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS22000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016877500.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS4 family transposase
SIO_010081: NMG88_RS22000
subclass of: SO_0000673
so part of: NMG88_RS22000
location: 23572..24494
location: region:23572-24494:1
so has part: feature:23572-24494:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23572-24494:1:exon

NMG88_RS22005
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS22005
old locus tag: NO976_04393
so part of: sequence
location: 24529..24843
location: region:24529-24843:1
so has part: feature:24529-24843:1:exon
subclass of: SO_0000010

77290538
type: Gene
SIO_000068: ncbigene

position:24529:1
position: 24529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24843:1
position: 24843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24529-24843:1:exon

NMG88_RS22005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS22005
old locus tag: NO976_04393
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MINLNDGSLLKLLEFNPNQDLCALFAVEWLREFRYSEVRDLLALNWQILADAIATGQEIAYYPYPLYLSDSHSALLIKPENLPKERYYLRQYLSQIAASQWTQR
SIO_010081: NMG88_RS22005
subclass of: SO_0000673
so part of: NMG88_RS22005
location: 24529..24843
location: region:24529-24843:1
so has part: feature:24529-24843:1:exon

WP_042158663.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24529-24843:1:exon

NMG88_RS22010
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS22010
old locus tag: NO976_04394
so part of: sequence
location: 24907..25071
location: region:24907-25071:1
so has part: feature:24907-25071:1:exon
subclass of: SO_0000010

77290539
type: Gene
SIO_000068: ncbigene

position:24907:1
position: 24907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25071:1
position: 25071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24907-25071:1:exon

NMG88_RS22010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS22010
old locus tag: NO976_04394
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWQLQQDKNRYQALASQSQAWMQTALETQQELDALQAELQKTQTALESIEKTQV
SIO_010081: NMG88_RS22010
subclass of: SO_0000673
so part of: NMG88_RS22010
location: 24907..25071
location: region:24907-25071:1
so has part: feature:24907-25071:1:exon

WP_158442924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24907-25071:1:exon

NMG88_RS22015
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS22015
old locus tag: NO976_04395
so part of: sequence
location: 25080..25913
location: region:25080-25913:1
so has part: feature:25080-25913:1:exon
subclass of: SO_0000010

77290540
type: Gene
SIO_000068: ncbigene

position:25080:1
position: 25080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25913:1
position: 25913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25080-25913:1:exon

NMG88_RS22015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS22015
old locus tag: NO976_04395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006625072.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MRFINPKTDYAFKKIFGSTESKDILISFLNALIYEGNSTIEDLEIINPNLPPKIQGFKDTYLDVKATLNDGTLVIIEMQVLNVQSFGKRVLFNATKTYAFQLQAGEGYRMLKPVIALTITDFEMFANRDKLISRFVYREKSEGWIYPDNDLELVFVELPKFTKELDQLETITDKWIYFIKFARSLTSIPENMDDIPELHRAFEIANQADLTPSELEDLERREMFIYDQQGAINLGREEEKRGIARNLLAQLNDEAIASATGLSLKAVEELRQEMSND
SIO_010081: NMG88_RS22015
subclass of: SO_0000673
so part of: NMG88_RS22015
location: 25080..25913
location: region:25080-25913:1
so has part: feature:25080-25913:1:exon

WP_042158750.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25080-25913:1:exon

NMG88_RS22020
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS22020
old locus tag: NO976_04396
pseudo: true
so part of: sequence
location: <26119..>26439
location: region:26119-26439:1
so has part: feature:26119-26439:1:exon
subclass of: SO_0000010

77290541
type: Gene
SIO_000068: ncbigene

position:26119:1
position: 26119
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:26439:1
position: 26439
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26119-26439:1:exon

NMG88_RS22020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS22020
old locus tag: NO976_04396
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012412053.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: NMG88_RS22020
subclass of: SO_0000673
so part of: NMG88_RS22020
location: <26119..>26439
location: region:26119-26439:1
so has part: feature:26119-26439:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26119-26439:1:exon

NMG88_RS22025
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS22025
pseudo: true
so part of: sequence
location: complement(26557..27263)
location: region:26557-27263:-1
so has part: feature:26557-27263:-1:exon
subclass of: SO_0000010

77290542
type: Gene
SIO_000068: ncbigene

position:26557:-1
position: 26557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27263:-1
position: 27263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26557-27263:-1:exon

NMG88_RS22025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS22025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_042152754.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: NMG88_RS22025
subclass of: SO_0000673
so part of: NMG88_RS22025
location: complement(26557..27263)
location: region:26557-27263:-1
so has part: feature:26557-27263:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26557-27263:-1:exon

NMG88_RS22030
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS22030
old locus tag: NO976_04399
so part of: sequence
location: complement(27323..29797)
location: region:27323-29797:-1
so has part: feature:27323-29797:-1:exon
subclass of: SO_0000010

77290543
type: Gene
SIO_000068: ncbigene

position:27323:-1
position: 27323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29797:-1
position: 29797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27323-29797:-1:exon

NMG88_RS22030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS22030
old locus tag: NO976_04399
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015163163.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helicase-related protein
translation: MSESAKPGSIVICRQRQWVVLPSDNSEVVRLRPLSGNEEQICGVFTRLGLENIEPAQFAPPNPDTIQNHTAAQLLMDATRLSLRSGAGPFRCLGRLSVRPRPYQLVPLLMALRLETVRLLIADDVGIGKTIEAGLIIRELLDRGEAKRMAVLCPPQLCDQWQRELKQKFHIDAVVVRSGTVSKLERGLPAGDSHIFSYYPHLIVSLDYVKSDRRRESFLVHCPDLVIVDEAHTCTHTGGERSTQQQRHQLVQKIAAKSNQHLILLTATPHSGIEASFLSLLGLLNPEFKQFSLDQLNEKQRIELARHFVQRRRVDVQQWLGNETPFPERVSQEKPYSLSKEYRQLFEAVYDFAWRLVKTAEETPLSHAQRRGRYWSALAILRCVMSSPAAAIATLSRQTEKYSVVEETTEDFDEELAATYVYDSTEQEQILDVAPTTIVEKGKQTFNDSQKRQLREFVILAKQLQGTNDRKLHQVKTLVKTLLQDGLNPIIWCRYIATAKYVAEALKELETKKTNLRVIAITGEQSEDEREIRLQELKNAPQRILVATDCLSEGINLQEHFTAAIHYDLPWNPNRLEQREGRIDRYGQTAPQVKCFLLYGQDNPIDGAVLQVLIRKAVEIHKSLGITVPVPMDSSTVQEAVFKSLFDRAAEVKQLTIFDLLDDLGSPLVEVHKNWDKAVEREKLNRTRFAQRAIKPEEVQQELIESDQILGSETDVAEFVKNACEKLSCSLVKQKKSWKLANIPLCVQPVLGDKSRLITFTSPAPEGVEYIGRNHPLVEGLARYILDRTYAGTLYIVCSKPANAANCSSICASNIKFRHKNYAD
SIO_010081: NMG88_RS22030
subclass of: SO_0000673
so part of: NMG88_RS22030
location: complement(27323..29797)
location: region:27323-29797:-1
so has part: feature:27323-29797:-1:exon

WP_254035871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27323-29797:-1:exon

NMG88_RS22035
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS22035
old locus tag: NO976_04400
so part of: sequence
location: 30144..30308
location: region:30144-30308:1
so has part: feature:30144-30308:1:exon
subclass of: SO_0000010

77290544
type: Gene
SIO_000068: ncbigene

position:30144:1
position: 30144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30308:1
position: 30308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30144-30308:1:exon

NMG88_RS22035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS22035
old locus tag: NO976_04400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015116112.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ssl1498 family light-harvesting-like protein
translation: MRTTNENGILNNYATEPKLYFAEYPSPEQQNRYALQASAAVLLLTSLLLIAFAA
SIO_010081: NMG88_RS22035
subclass of: SO_0000673
so part of: NMG88_RS22035
location: 30144..30308
location: region:30144-30308:1
so has part: feature:30144-30308:1:exon

WP_042158745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30144-30308:1:exon

NMG88_RS22040
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS22040
old locus tag: NO976_04401
so part of: sequence
location: complement(30366..30662)
location: region:30366-30662:-1
so has part: feature:30366-30662:-1:exon
subclass of: SO_0000010

77290545
type: Gene
SIO_000068: ncbigene

position:30366:-1
position: 30366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30662:-1
position: 30662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30366-30662:-1:exon

NMG88_RS22040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS22040
old locus tag: NO976_04401
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009546332.1
GO function: GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HNH endonuclease
translation: MSLNRYPDNWTELALAVKESANWQCQRCGRLCLKPGETLPDTLKRRAYVLQVHHWNLDPGDNRLENLVALCSSCHLAYHRRSRGNISPGQLSLNLKLS
SIO_010081: NMG88_RS22040
subclass of: SO_0000673
so part of: NMG88_RS22040
location: complement(30366..30662)
location: region:30366-30662:-1
so has part: feature:30366-30662:-1:exon

WP_042158747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30366-30662:-1:exon

NMG88_RS22045
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS22045
old locus tag: NO976_04403
so part of: sequence
location: 31684..35301
location: region:31684-35301:1
so has part: feature:31684-35301:1:exon
subclass of: SO_0000010

77290546
type: Gene
SIO_000068: ncbigene

position:31684:1
position: 31684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35301:1
position: 35301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31684-35301:1:exon

NMG88_RS22045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS22045
old locus tag: NO976_04403
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MITTDTTLKGKAMPQGGGYAIASSKRNPCPICEKTHGCKIADNLIMCLRGDSNWSIPGWKYLKPLRGGMGGLFGADSGERQEYRPEPKAAKPSNITPLTDEQLNNEARKILKQLGLTAKHREQLRGRGLTDAQIDSIGFKSVDRYQEFNLIPINPNFPGMGDKGTLANSGSGILIPIWNIKGLIIGFQLARDDRNPKYQWLWGSSDRRVSGELPLQFLKLNSSPDLNIIEGTQKPLPAAHLHNINVLGAGGVNWHGSPNELAAIINSGLFSRYILNPDAGSKANHHVMGGYRALYLFLKKLEISLYIRDWGQGDRPKSDKVDVDEITTETFNNARIISYIEWDNQVIDQGELSEEQWFNRFKLPELQNDLARIVKRFYSRVNQKNKSVKPEQNPEPKPVIIPEQKIECSAIVLWKPQKLISLPYTPGQLPTVEEWRQLGCPKIIFNNGERLALYGEAAERGFKITLDTTAAGHGKSFDSGLATLETFAIDPDDKENKARIFYLSPDHRNPTNATVEANYVDLEARHNGLNYDTDRTTALGKSHVIRAKNQNPDIPSNCPENQTFLTVAEMGLSAFGGKDSPICQSCPLLNQGCLFLENRRYTLTNERLIRADINSIHPSSDDILILDDLSIENTHQITVEINDVLMMVGKLQLRADHRLFKILRPILVEIYKGLLAVTTEKHKYGISHREVMKLMPSDDEINQLIWEHYSDDWLACDNVWGTPIYHYEMINGIPEATKVIGENFIAPSLIDLRNECYKLLENYAKFINGLQTPEEKQQAIKDNVIPPWLPALIDCLIGNKRINLRIDNGKLIITKLSKRHRNIIKSAGLSIALDATQNKRDYALSLGISLNEILEVSEVKQSTPNLHIHIIKGMGRGGKQRRDTMQERINVAINAIAKRHQGQNIGLIDHKSAVANYQDLGHKLGYWHKDTRGSNQFLNTQVMVSVGHPCPNLGQVAAEYQTLTGYFPTPDQRTGRYGGWVNRKIKAELIQDVGRLRAHLRPDEQLHSYLVADLDDDTISALRLAYPTATVIIEDIYDIAPGAASKGVQTERGIIEALWSSVKSGVVATIDDIAEQLGITKGGVSKNLKDRLGIGFREVKKSLLLLYRAINNKSKLSELDSDALYIALEYLPNVVRDFENGQITPADVVVEVVNTAKAYGNRQFRHILAATPIPILCKLLGAVLRFVPPQLLSEFIPISPHSETA
SIO_010081: NMG88_RS22045
subclass of: SO_0000673
so part of: NMG88_RS22045
location: 31684..35301
location: region:31684-35301:1
so has part: feature:31684-35301:1:exon

WP_254035872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31684-35301:1:exon

NMG88_RS22050
type: Gene
subclass of: SO_0000704
RO_0002162: 1160
locus tag: NMG88_RS22050
old locus tag: NO976_04404
pseudo: true
so part of: sequence
location: complement(35394..>37841)
location: region:35394-37841:-1
so has part: feature:35394-37841:-1:exon
subclass of: SO_0000010

77290547
type: Gene
SIO_000068: ncbigene

position:35394:-1
position: 35394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37841:-1
position: 37841
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35394-37841:-1:exon

NMG88_RS22050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1160
locus tag: NMG88_RS22050
old locus tag: NO976_04404
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: incomplete; too short partial abutting assembly gap; missing N-terminus; Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: NMG88_RS22050
subclass of: SO_0000673
so part of: NMG88_RS22050
location: complement(35394..>37841)
location: region:35394-37841:-1
so has part: feature:35394-37841:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35394-37841:-1:exon