Mycoplasmopsis maculosa strain NCTC10168 chromosome 1.
Mycoplasmopsis maculosa (Mycoplasma maculosum)
Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasmopsis.
Submitted (24-JAN-2019) WTSI, Pathogen Informatics, Wellcome Trust Sanger Institute, CB10 1SA, United Kingdom
REFSEQ INFORMATION: The reference sequence is identical to\nLR215037.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/13/2022 06:01:49\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 786\nCDSs (total) :: 745\nGenes (coding) :: 738\nCDSs (with protein) :: 738\nGenes (RNA) :: 41\nrRNAs :: 2, 1, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 1, 2 (5S, 16S, 23S)\ntRNAs :: 33\nncRNAs :: 3\nPseudo Genes (total) :: 7\nCDSs (without protein) :: 7\nPseudo Genes (ambiguous residues) :: 0 of 7\nPseudo Genes (frameshifted) :: 3 of 7\nPseudo Genes (incomplete) :: 3 of 7\nPseudo Genes (internal stop) :: 1 of 7\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##
COORDINATES: similar to AA sequence:RefSeq:WP_004421517.1
incomplete; too short partial abutting assembly gap; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013455910.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004023844.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013456355.1
COORDINATES: similar to AA sequence:RefSeq:WP_013954940.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_006608891.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511257.1
COORDINATES: protein motif:HMM:TIGR02012.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013456566.1
COORDINATES: similar to AA sequence:RefSeq:WP_013456552.1
COORDINATES: similar to AA sequence:RefSeq:WP_013354782.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004795358.1
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014829963.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011283777.1
COORDINATES: similar to AA sequence:RefSeq:WP_020003153.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000124453.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004795370.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011283773.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004023953.1
COORDINATES: similar to AA sequence:RefSeq:WP_013456156.1
COORDINATES: similar to AA sequence:RefSeq:WP_004417011.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004023950.1
COORDINATES: similar to AA sequence:RefSeq:WP_011949698.1
COORDINATES: similar to AA sequence:RefSeq:WP_004023948.1
COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1
COORDINATES: similar to AA sequence:RefSeq:WP_004023946.1
COORDINATES: similar to AA sequence:RefSeq:WP_013455947.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004023944.1
COORDINATES: similar to AA sequence:RefSeq:WP_013354764.1
COORDINATES: similar to AA sequence:RefSeq:WP_013456526.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: protein motif:HMM:NF015210.2
COORDINATES: similar to AA sequence:RefSeq:WP_006886397.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006608630.1
COORDINATES: similar to AA sequence:RefSeq:WP_004023937.1
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011283714.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004025773.1
COORDINATES: similar to AA sequence:RefSeq:WP_015286921.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794370.1
COORDINATES: similar to AA sequence:RefSeq:WP_004023932.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_013456394.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013022148.1
GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
energy-coupling factor transporter ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_011949683.1
COORDINATES: similar to AA sequence:RefSeq:WP_006608620.1
energy-coupling factor transporter transmembrane component T
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF018367.2
COORDINATES: protein motif:HMM:NF012235.2
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF012738.2
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013954806.1
COORDINATES: similar to AA sequence:RefSeq:WP_013456276.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004024497.1
COORDINATES: similar to AA sequence:RefSeq:WP_015510845.1
COORDINATES: protein motif:HMM:TIGR01145.1
COORDINATES: similar to AA sequence:RefSeq:WP_011949525.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004419585.1
COORDINATES: similar to AA sequence:RefSeq:WP_013354467.1
COORDINATES: protein motif:HMM:NF015834.2
COORDINATES: similar to AA sequence:RefSeq:WP_004796663.1
COORDINATES: similar to AA sequence:RefSeq:WP_006608738.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010925511.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF019976.2
nuclease-related domain-containing protein
COORDINATES: protein motif:HMM:NF013980.2
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_004024466.1
COORDINATES: similar to AA sequence:RefSeq:WP_004024467.1
COORDINATES: similar to AA sequence:RefSeq:WP_013456083.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008973 - phosphopentomutase activity [Evidence IEA]
GO:0043094 - cellular metabolic compound salvage [Evidence IEA]; GO:0009117 - nucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004024435.1
GO:0043937 - regulation of sporulation [Evidence IEA]
COORDINATES: protein motif:HMM:NF017911.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00011
COORDINATES: similar to AA sequence:RefSeq:WP_013456157.1
COORDINATES: similar to AA sequence:RefSeq:WP_000079988.1
COORDINATES: similar to AA sequence:RefSeq:WP_013526974.1
COORDINATES: protein motif:HMM:NF016116.2
lipoprotein 17-related variable surface protein
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013526996.1
transcription antitermination protein NusB
COORDINATES: similar to AA sequence:RefSeq:WP_004794253.1
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_004796181.1
COORDINATES: protein motif:HMM:NF019036.2
COORDINATES: similar to AA sequence:RefSeq:WP_005684032.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511263.1
COORDINATES: similar to AA sequence:RefSeq:WP_013022126.1
COORDINATES: similar to AA sequence:RefSeq:WP_006608776.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004418918.1
COORDINATES: similar to AA sequence:RefSeq:WP_013354952.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013954702.1
COORDINATES: protein motif:HMM:NF016109.2
COORDINATES: similar to AA sequence:RefSeq:WP_015287303.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004024457.1
COORDINATES: protein motif:HMM:NF018028.2
COORDINATES: similar to AA sequence:RefSeq:WP_006886794.1
COORDINATES: protein motif:HMM:NF014679.2
COORDINATES: similar to AA sequence:RefSeq:WP_004796478.1
COORDINATES: similar to AA sequence:RefSeq:WP_013354611.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794720.1
COORDINATES: similar to AA sequence:RefSeq:WP_004418869.1
GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IEA]
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013354479.1
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794806.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886834.1
GO:0015267 - channel activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00401.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: similar to AA sequence:RefSeq:WP_013301991.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011949458.1
GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF019371.2
COORDINATES: protein motif:HMM:NF024098.2
COORDINATES: protein motif:HMM:NF014177.2
GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0032775 - DNA methylation on adenine [Evidence IEA]
COORDINATES: protein motif:HMM:NF013068.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF025612.2
COORDINATES: protein motif:HMM:NF025035.2
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR04526.1
GO:0005515 - protein binding [Evidence IEA]
putative immunoglobulin-blocking virulence protein
COORDINATES: protein motif:HMM:NF013860.2
COORDINATES: similar to AA sequence:RefSeq:WP_006608713.1
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794616.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0043096 - purine nucleobase salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004419279.1
GO:0016154 - pyrimidine-nucleoside phosphorylase activity [Evidence IEA]
GO:0006213 - pyrimidine nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013954918.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004023797.1
GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsY
COORDINATES: similar to AA sequence:RefSeq:WP_011949555.1
COORDINATES: similar to AA sequence:RefSeq:WP_013456043.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011264928.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF033817.2
COORDINATES: protein motif:HMM:NF014871.2
GO:0009166 - nucleotide catabolic process [Evidence IEA]
5'-nucleotidase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013622.2
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: similar to AA sequence:RefSeq:WP_013954789.1
COORDINATES: protein motif:HMM:NF012398.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013456233.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013054454.1
DNA integrity scanning protein DisA nucleotide-binding domain protein
COORDINATES: similar to AA sequence:RefSeq:WP_004024420.1
Nif3-like dinuclear metal center hexameric protein
COORDINATES: similar to AA sequence:RefSeq:WP_013954706.1
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004418961.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011949493.1
GO:0003676 - nucleic acid binding [Evidence IEA]
S1 RNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012562.2
COORDINATES: similar to AA sequence:RefSeq:WP_013021982.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0019104 - DNA N-glycosylase activity [Evidence IEA]; GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
COORDINATES: similar to AA sequence:RefSeq:WP_013456303.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO:0051302 - regulation of cell division [Evidence IEA]
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: similar to AA sequence:RefSeq:WP_011949546.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: protein motif:HMM:NF012320.2
COORDINATES: similar to AA sequence:RefSeq:WP_013354659.1
16S rRNA (uracil(1498)-N(3))-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013022033.1
COORDINATES: protein motif:HMM:TIGR00621.2
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013456196.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013354612.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: protein motif:HMM:NF040179.1
COORDINATES: similar to AA sequence:RefSeq:WP_013354650.1
COORDINATES: similar to AA sequence:RefSeq:WP_006608557.1
COORDINATES: similar to AA sequence:RefSeq:WP_006608558.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006608559.1
COORDINATES: similar to AA sequence:RefSeq:WP_013527006.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013022085.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004419695.1
GO:0015444 - P-type magnesium transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011949713.1
COORDINATES: similar to AA sequence:RefSeq:WP_004421514.1
COORDINATES: protein motif:HMM:TIGR01847.1
COORDINATES: similar to AA sequence:RefSeq:WP_004416229.1
COORDINATES: protein motif:HMM:NF013212.2
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013354567.1
GO:0009408 - response to heat [Evidence IEA]
heat-inducible transcriptional repressor HrcA
COORDINATES: similar to AA sequence:RefSeq:WP_011949718.1
COORDINATES: similar to AA sequence:RefSeq:WP_011949719.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013354664.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054665.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013456279.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004421484.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004418894.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006608534.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013526966.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795903.1
COORDINATES: protein motif:HMM:NF024420.2
COORDINATES: protein motif:HMM:NF024866.2
COORDINATES: similar to AA sequence:RefSeq:WP_011949506.1
GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006608894.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004024486.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004024003.1
COORDINATES: protein motif:HMM:NF017509.2
COORDINATES: similar to AA sequence:RefSeq:WP_004795156.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054539.1
COORDINATES: similar to AA sequence:RefSeq:WP_011283211.1
COORDINATES: similar to AA sequence:RefSeq:WP_004420902.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: similar to AA sequence:RefSeq:WP_004023996.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795289.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005683761.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004418994.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886296.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013456577.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013022139.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004024415.1
COORDINATES: similar to AA sequence:RefSeq:WP_004024416.1
COORDINATES: protein motif:HMM:NF017518.2
COORDINATES: protein motif:HMM:NF014581.2
type IV secretory system conjugative DNA transfer family protein
COORDINATES: protein motif:HMM:NF019344.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024486.2
COORDINATES: protein motif:HMM:NF033563.0
COORDINATES: protein motif:HMM:NF021104.2
COORDINATES: protein motif:HMM:NF019348.2
COORDINATES: protein motif:HMM:TIGR00571.1
GO:0006306 - DNA methylation [Evidence IEA]
Dam family site-specific DNA-(adenine-N6)-methyltransferase
COORDINATES: protein motif:HMM:NF013540.2
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006608327.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013955076.1
COORDINATES: similar to AA sequence:RefSeq:WP_013955077.1
COORDINATES: similar to AA sequence:RefSeq:WP_010924910.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013022355.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013022356.1
COORDINATES: similar to AA sequence:RefSeq:WP_004024171.1
COORDINATES: similar to AA sequence:RefSeq:WP_013022358.1
COORDINATES: similar to AA sequence:RefSeq:WP_013354401.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886212.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: protein motif:HMM:NF019887.2
COORDINATES: similar to AA sequence:RefSeq:WP_015287276.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054578.1
COORDINATES: similar to AA sequence:RefSeq:WP_006608864.1
purine nucleoside phosphorylase DeoD-type
COORDINATES: protein motif:HMM:NF014680.2
COORDINATES: similar to AA sequence:RefSeq:WP_004024029.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886536.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_006608846.1
COORDINATES: similar to AA sequence:RefSeq:WP_011206165.1
type III restriction endonuclease subunit M
COORDINATES: similar to AA sequence:RefSeq:WP_004797145.1
COORDINATES: similar to AA sequence:RefSeq:WP_010321313.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013527010.1
COORDINATES: similar to AA sequence:RefSeq:WP_013456008.1
COORDINATES: similar to AA sequence:RefSeq:WP_013456071.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886920.1
COORDINATES: similar to AA sequence:RefSeq:WP_011949306.1
COORDINATES: similar to AA sequence:RefSeq:WP_013021792.1
COORDINATES: protein motif:HMM:NF036621.2
COORDINATES: similar to AA sequence:RefSeq:WP_013021742.1
COORDINATES: similar to AA sequence:RefSeq:WP_015287027.1
nicotinate-nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013021740.1
COORDINATES: similar to AA sequence:RefSeq:WP_006608586.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
iron-sulfur cluster assembly scaffold protein
COORDINATES: similar to AA sequence:RefSeq:WP_004420425.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_013527076.1
GO:0004177 - aminopeptidase activity [Evidence IEA]
GO:0030163 - protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011283450.1
COORDINATES: similar to AA sequence:RefSeq:WP_013526676.1
COORDINATES: similar to AA sequence:RefSeq:WP_013354368.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013456569.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_013054582.1
COORDINATES: similar to AA sequence:RefSeq:WP_013302427.1
COORDINATES: similar to AA sequence:RefSeq:WP_013354422.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013954595.1
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: similar to AA sequence:RefSeq:WP_013021803.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013021802.1
GO:0008776 - acetate kinase activity [Evidence IEA]
GO:0006083 - acetate metabolic process [Evidence IEA]; GO:0006113 - fermentation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013354427.1
COORDINATES: similar to AA sequence:RefSeq:WP_006608792.1
bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_004419361.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013955031.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: similar to AA sequence:RefSeq:WP_015511029.1
COORDINATES: similar to AA sequence:RefSeq:WP_013456037.1
COORDINATES: similar to AA sequence:RefSeq:WP_004418943.1
COORDINATES: similar to AA sequence:RefSeq:WP_004023916.1
COORDINATES: protein motif:HMM:NF015276.2
COORDINATES: protein motif:HMM:NF012311.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014829889.1
GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013954658.1
tRNA1(Val) (adenine(37)-N6)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004024371.1
GO:0008997 - ribonuclease R activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013456572.1
COORDINATES: similar to AA sequence:RefSeq:WP_015287071.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004421170.1
protein phosphatase 2C domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015511003.1
COORDINATES: similar to AA sequence:RefSeq:WP_013021864.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: similar to AA sequence:RefSeq:WP_006608865.1
COORDINATES: similar to AA sequence:RefSeq:WP_013354947.1
COORDINATES: similar to AA sequence:RefSeq:WP_013021758.1
COORDINATES: similar to AA sequence:RefSeq:WP_013456243.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: similar to AA sequence:RefSeq:WP_006608841.1
GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013021754.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013354390.1
COORDINATES: similar to AA sequence:RefSeq:WP_006608342.1
tRNA (cytidine(34)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011949832.1
COORDINATES: similar to AA sequence:RefSeq:WP_004421452.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: similar to AA sequence:RefSeq:WP_011283759.1
COORDINATES: similar to AA sequence:RefSeq:WP_010924813.1
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: protein motif:HMM:TIGR00115.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013456485.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013354655.1
COORDINATES: protein motif:HMM:NF022525.2
COORDINATES: similar to AA sequence:RefSeq:WP_013354889.1
helix-hairpin-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013021853.1
GO:0016684 - oxidoreductase activity, acting on peroxide as acceptor [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: similar to AA sequence:RefSeq:WP_004421008.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: similar to AA sequence:RefSeq:WP_005683204.1
COORDINATES: similar to AA sequence:RefSeq:WP_013526681.1
aspartyl/glutamyl-tRNA amidotransferase subunit C
COORDINATES: similar to AA sequence:RefSeq:WP_013955070.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794236.1
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006608425.1
COORDINATES: similar to AA sequence:RefSeq:WP_006608424.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013302237.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: similar to AA sequence:RefSeq:WP_006608419.1
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_013526633.1
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013456169.1
COORDINATES: similar to AA sequence:RefSeq:WP_004420044.1
COORDINATES: protein motif:HMM:NF020118.2
transcription termination/antitermination protein NusA
COORDINATES: protein motif:HMM:NF036577.2
COORDINATES: protein motif:HMM:NF036772.2
COORDINATES: similar to AA sequence:RefSeq:WP_013527151.1
COORDINATES: similar to AA sequence:RefSeq:WP_013954648.1
COORDINATES: similar to AA sequence:RefSeq:WP_014579857.1
COORDINATES: similar to AA sequence:RefSeq:WP_013955060.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013456539.1
COORDINATES: similar to AA sequence:RefSeq:WP_013354418.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795273.1
DNA starvation/stationary phase protection protein
COORDINATES: similar to AA sequence:RefSeq:WP_013022332.1
COORDINATES: similar to AA sequence:RefSeq:WP_006608647.1
COORDINATES: protein motif:HMM:NF012372.2
COORDINATES: protein motif:HMM:NF024783.2
COORDINATES: similar to AA sequence:RefSeq:WP_013526678.1
COORDINATES: similar to AA sequence:RefSeq:WP_011387492.1
COORDINATES: similar to AA sequence:RefSeq:WP_011949826.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004420951.1
COORDINATES: similar to AA sequence:RefSeq:WP_004024105.1
GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO:0015703 - chromate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013355018.1
COORDINATES: similar to AA sequence:RefSeq:WP_020002866.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03639.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type II CRISPR-associated endonuclease Cas1
COORDINATES: protein motif:HMM:TIGR01865.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]
Cas9, originally named Csn1, is the large, multifunctional signature protein of type II CRISPR/Cas systems. It is well known even to general audiences because its RNA-guided endonuclease activity has made it a popular tool for custom editing of eukaryotic genomes; Derived by automated computational analysis using gene prediction method: Protein Homology.
type II CRISPR RNA-guided endonuclease Cas9
COORDINATES: similar to AA sequence:RefSeq:WP_004795978.1
COORDINATES: similar to AA sequence:RefSeq:WP_013526907.1
COORDINATES: similar to AA sequence:RefSeq:WP_013022276.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013955026.1
GO:0008233 - peptidase activity [Evidence IEA]
This family includes IgM or IgG-cleaving cysteine proteases; Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_013954704.1
COORDINATES: similar to AA sequence:RefSeq:WP_013955042.1
COORDINATES: similar to AA sequence:RefSeq:WP_013527162.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795204.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: protein motif:HMM:NF024575.2
catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004795199.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006608705.1
COORDINATES: similar to AA sequence:RefSeq:WP_013456226.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_013955048.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014829985.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: protein motif:HMM:TIGR00099.1
COORDINATES: similar to AA sequence:RefSeq:WP_011949846.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: protein motif:HMM:NF015736.2
COORDINATES: similar to AA sequence:RefSeq:WP_013456168.1
COORDINATES: similar to AA sequence:RefSeq:WP_004420672.1
COORDINATES: similar to AA sequence:RefSeq:WP_004024178.1
COORDINATES: similar to AA sequence:RefSeq:WP_004024179.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004024181.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024991.2
COORDINATES: similar to AA sequence:RefSeq:WP_004024183.1
chromosomal replication initiator protein DnaA
COORDINATES: similar to AA sequence:RefSeq:WP_013954487.1
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013354278.1
RNA-binding S4 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013021730.1
GO:0004071 - aspartate-ammonia ligase activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: similar to AA sequence:RefSeq:WP_011949242.1
GO:0017118 - lipoyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004026026.1
COORDINATES: protein motif:HMM:TIGR04313.1
COORDINATES: similar to AA sequence:RefSeq:WP_004024240.1
COORDINATES: similar to AA sequence:RefSeq:WP_006608397.1
GO:0004526 - ribonuclease P activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004024238.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796054.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015511213.1
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_020003208.1
COORDINATES: similar to AA sequence:RefSeq:WP_004024222.1
COORDINATES: similar to AA sequence:RefSeq:WP_013022118.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011949224.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_013021709.1
COORDINATES: protein motif:HMM:NF012210.0
COORDINATES: similar to AA sequence:RefSeq:WP_019269142.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004024216.1
COORDINATES: similar to AA sequence:RefSeq:WP_013456184.1
COORDINATES: similar to AA sequence:RefSeq:WP_013526733.1
COORDINATES: similar to AA sequence:RefSeq:WP_013729918.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794965.1
COORDINATES: protein motif:HMM:NF012413.2
COORDINATES: similar to AA sequence:RefSeq:WP_004024350.1
GO:0008168 - methyltransferase activity [Evidence IEA]
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: similar to AA sequence:RefSeq:WP_004420631.1
COORDINATES: similar to AA sequence:RefSeq:WP_013354281.1
COORDINATES: protein motif:HMM:NF016146.2
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011949358.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: similar to AA sequence:RefSeq:WP_005683925.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013456118.1
GO:0009340 - DNA topoisomerase IV complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886376.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886524.1
COORDINATES: similar to AA sequence:RefSeq:WP_004024347.1
COORDINATES: similar to AA sequence:RefSeq:WP_013456533.1
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013955000.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004024235.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_013021720.1
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: similar to AA sequence:RefSeq:WP_013354929.1
COORDINATES: similar to AA sequence:RefSeq:WP_005683949.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_013021717.1
NAD(P)-binding domain-containing protein
COORDINATES: protein motif:HMM:NF015714.2
COORDINATES: similar to AA sequence:RefSeq:WP_004795514.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004796081.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013354400.1
YihY/virulence factor BrkB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005683202.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004420660.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: similar to AA sequence:RefSeq:WP_011949355.1
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: similar to AA sequence:RefSeq:WP_013021731.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004024299.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004796985.1
COORDINATES: similar to AA sequence:RefSeq:WP_011949297.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794865.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]
GO:0008655 - pyrimidine-containing compound salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004421128.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
cysteine peptidase family C39 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004421117.1
RpiB/LacA/LacB family sugar-phosphate isomerase
COORDINATES: protein motif:HMM:NF013828.2
COORDINATES: similar to AA sequence:RefSeq:WP_013022282.1
COORDINATES: similar to AA sequence:RefSeq:WP_014829984.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004795222.1
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013456518.1
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: similar to AA sequence:RefSeq:WP_004420225.1
GO:0006450 - regulation of translational fidelity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886740.1
LacI family DNA-binding transcriptional regulator
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
COORDINATES: similar to AA sequence:RefSeq:WP_013954543.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794503.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
class II fructose-1,6-bisphosphate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_004794800.1
COORDINATES: similar to AA sequence:RefSeq:WP_019269372.1
COORDINATES: similar to AA sequence:RefSeq:WP_004024446.1
COORDINATES: protein motif:HMM:NF022351.2
COORDINATES: similar to AA sequence:RefSeq:WP_015510731.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: similar to AA sequence:RefSeq:WP_013354325.1
COORDINATES: protein motif:HMM:NF011546.0
COORDINATES: similar to AA sequence:RefSeq:WP_004420208.1
COORDINATES: protein motif:HMM:NF024702.2
leucine-rich repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006608489.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004024017.1
COORDINATES: similar to AA sequence:RefSeq:WP_006608781.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0032549 - ribonucleoside binding [Evidence IEA]
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011283622.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
DNA-directed RNA polymerase subunit beta'
COORDINATES: protein motif:HMM:NF012730.2
GO:0006811 - ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012863.2
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013954986.1
COORDINATES: similar to AA sequence:RefSeq:WP_013354512.1
COORDINATES: similar to AA sequence:RefSeq:WP_013021989.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_013954828.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_004418904.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: similar to AA sequence:RefSeq:WP_004024476.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794172.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013456114.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054770.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01550.1
GO:0016301 - kinase activity [Evidence IEA]
type II toxin-antitoxin system death-on-curing family toxin
COORDINATES: protein motif:HMM:NF017885.2
COORDINATES: similar to AA sequence:RefSeq:WP_005683117.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013527083.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013354902.1
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013054125.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_013354904.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_004024432.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054686.1
COORDINATES: protein motif:HMM:TIGR00165.1
COORDINATES: similar to AA sequence:RefSeq:WP_011949590.1
COORDINATES: similar to AA sequence:RefSeq:WP_013456295.1
COORDINATES: similar to AA sequence:RefSeq:WP_014829900.1
COORDINATES: similar to AA sequence:RefSeq:WP_013021886.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011949416.1
COORDINATES: similar to AA sequence:RefSeq:WP_013954676.1
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_004795713.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: similar to AA sequence:RefSeq:WP_004024387.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013021877.1
COORDINATES: protein motif:HMM:NF005518.0
COORDINATES: similar to AA sequence:RefSeq:WP_004024390.1
COORDINATES: similar to AA sequence:RefSeq:WP_013456586.1
COORDINATES: similar to AA sequence:RefSeq:WP_011283326.1
COORDINATES: similar to AA sequence:RefSeq:WP_006608729.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015511093.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013421.2
COORDINATES: similar to AA sequence:RefSeq:WP_006886950.1
COORDINATES: similar to AA sequence:RefSeq:WP_012751846.1
COORDINATES: similar to AA sequence:RefSeq:WP_013954884.1
COORDINATES: similar to AA sequence:RefSeq:WP_004023890.1
COORDINATES: similar to AA sequence:RefSeq:WP_012498071.1
COORDINATES: similar to AA sequence:RefSeq:WP_004023888.1
COORDINATES: similar to AA sequence:RefSeq:WP_013526786.1
COORDINATES: protein motif:HMM:NF014068.2
COORDINATES: similar to AA sequence:RefSeq:WP_006608694.1
COORDINATES: similar to AA sequence:RefSeq:WP_013354483.1
COORDINATES: similar to AA sequence:RefSeq:WP_013021770.1
COORDINATES: similar to AA sequence:RefSeq:WP_004419016.1
COORDINATES: similar to AA sequence:RefSeq:WP_000994906.1
COORDINATES: protein motif:HMM:NF015709.2
COORDINATES: similar to AA sequence:RefSeq:WP_011949614.1
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: similar to AA sequence:RefSeq:WP_013022080.1
COORDINATES: similar to AA sequence:RefSeq:WP_013022079.1
COORDINATES: similar to AA sequence:RefSeq:WP_013022077.1
COORDINATES: similar to AA sequence:RefSeq:WP_004421519.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02191.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013954720.1