Streptomyces phaeoluteigriseus strain Qhu-M197 plasmid unnamed2, complete sequence.
Bacteria; Actinomycetota; Actinomycetes; Kitasatosporales; Streptomycetaceae; Streptomyces; Streptomyces aurantiacus group.
Complete genome sequence of soil microorganisms Streptomyces sp. Qhu-M197 isolated from Alpine meadows habitats on the Tibetan Plateau
Submitted (15-JUN-2022) Faculty of Eco-Environmental Engineering, qinghaiuniversity, No. 251 Ningda Road, Chengbei District, Xining City, Qinghai Province 810000, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP099470.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Hifiasm v. v0.14; Circlator v. v1.5.5;\n Pilon v. v1.22\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 68.51291x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 07/05/2023 05:05:06\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 8,094\nCDSs (total) :: 8,000\nGenes (coding) :: 7,682\nCDSs (with protein) :: 7,682\nGenes (RNA) :: 94\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 73\nncRNAs :: 3\nPseudo Genes (total) :: 318\nCDSs (without protein) :: 318\nPseudo Genes (ambiguous residues) :: 0 of 318\nPseudo Genes (frameshifted) :: 146 of 318\nPseudo Genes (incomplete) :: 257 of 318\nPseudo Genes (internal stop) :: 34 of 318\nPseudo Genes (multiple problems) :: 101 of 318\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_006375028.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF015422.2
GO:0003676 - nucleic acid binding [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
helicase associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007387235.1
COORDINATES: similar to AA sequence:RefSeq:WP_007387234.1
COORDINATES: protein motif:HMM:NF022633.2
COORDINATES: similar to AA sequence:RefSeq:WP_020138204.1
COORDINATES: similar to AA sequence:RefSeq:WP_018565838.1
COORDINATES: similar to AA sequence:RefSeq:WP_010988964.1
COORDINATES: similar to AA sequence:RefSeq:WP_010049001.1
COORDINATES: similar to AA sequence:RefSeq:WP_006375039.1
TnsA-like heteromeric transposase endonuclease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011026768.1
frameshifted; incomplete; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.