Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence.
Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia group; Massilia.
The complete genome of Massilia putida, a heavy metal resistant bacterium from wolfram mine tailing
Submitted (03-JAN-2017) State Key Laboratory of Applied Microbiology Southern China, Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Guangdong Open Laboratory of Applied Microbiology, Jiangnan University Guangdong Institute of Microbiology, No 100 Xialiezhong Road, Guangzhou, Guangdong 510070, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP019037.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 2.3.0\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 160.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/07/2022 05:00:46\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,712\nCDSs (total) :: 6,600\nGenes (coding) :: 6,437\nCDSs (with protein) :: 6,437\nGenes (RNA) :: 112\nrRNAs :: 7, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 7, 7, 7 (5S, 16S, 23S)\ntRNAs :: 87\nncRNAs :: 4\nPseudo Genes (total) :: 163\nCDSs (without protein) :: 163\nPseudo Genes (ambiguous residues) :: 0 of 163\nPseudo Genes (frameshifted) :: 55 of 163\nPseudo Genes (incomplete) :: 118 of 163\nPseudo Genes (internal stop) :: 14 of 163\nPseudo Genes (multiple problems) :: 22 of 163\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_008922539.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018438794.1
COORDINATES: similar to AA sequence:RefSeq:WP_006760938.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405244.1
COORDINATES: similar to AA sequence:RefSeq:WP_006760936.1
COORDINATES: similar to AA sequence:RefSeq:WP_006752565.1
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
GO:0019632 - shikimate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012405247.1
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010464562.1
COORDINATES: similar to AA sequence:RefSeq:WP_003112679.1
sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011801550.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020656413.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019651930.1
COORDINATES: similar to AA sequence:RefSeq:WP_020656418.1
COORDINATES: similar to AA sequence:RefSeq:WP_004260011.1
COORDINATES: similar to AA sequence:RefSeq:WP_020656420.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_006296207.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019142468.1
3-keto-5-aminohexanoate cleavage protein
COORDINATES: similar to AA sequence:RefSeq:WP_020656289.1
bifunctional diguanylate cyclase/phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_020650109.1
GO:0070403 - NAD+ binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
fatty acid oxidation complex subunit alpha FadB
COORDINATES: protein motif:HMM:NF012596.2
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011546253.1
GO:0016034 - maleylacetoacetate isomerase activity [Evidence IEA]
GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]; GO:0006572 - tyrosine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019590.2
COORDINATES: similar to AA sequence:RefSeq:WP_012338757.1
COORDINATES: similar to AA sequence:RefSeq:WP_007739803.1
COORDINATES: protein motif:HMM:NF024938.2
COORDINATES: similar to AA sequence:RefSeq:WP_011236597.1
COORDINATES: similar to AA sequence:RefSeq:WP_011766152.1
fumarylacetoacetate hydrolase family protein
COORDINATES: protein motif:HMM:NF014757.2
GO:0070403 - NAD+ binding [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017524148.1
crotonase/enoyl-CoA hydratase family protein
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: protein motif:HMM:NF012656.2
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006218219.1
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017450415.1
COORDINATES: protein motif:HMM:NF025008.2
COORDINATES: similar to AA sequence:RefSeq:WP_019051771.1
COORDINATES: similar to AA sequence:RefSeq:WP_016492768.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020296345.1
COORDINATES: similar to AA sequence:RefSeq:WP_016492783.1
COORDINATES: similar to AA sequence:RefSeq:WP_003051302.1
COORDINATES: similar to AA sequence:RefSeq:WP_016492780.1
COORDINATES: similar to AA sequence:RefSeq:WP_008919843.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016492698.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016492769.1
COORDINATES: similar to AA sequence:RefSeq:WP_016492770.1
COORDINATES: similar to AA sequence:RefSeq:WP_008370398.1
COORDINATES: similar to AA sequence:RefSeq:WP_013722941.1
COORDINATES: similar to AA sequence:RefSeq:WP_004212350.1
COORDINATES: protein motif:HMM:NF017652.2
GO:0016740 - transferase activity [Evidence IEA]
GO:0019475 - L-lysine catabolic process to acetate [Evidence IEA]
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: similar to AA sequence:RefSeq:WP_018637886.1
COORDINATES: similar to AA sequence:RefSeq:WP_016492732.1
COORDINATES: similar to AA sequence:RefSeq:WP_011604706.1
COORDINATES: protein motif:HMM:NF037007.2
COORDINATES: protein motif:HMM:NF012363.2
COORDINATES: similar to AA sequence:RefSeq:WP_011951893.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: protein motif:HMM:NF024212.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012334.2
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_018501837.1
COORDINATES: similar to AA sequence:RefSeq:WP_016492727.1
COORDINATES: similar to AA sequence:RefSeq:WP_019700229.1
COORDINATES: similar to AA sequence:RefSeq:WP_008374222.1
COORDINATES: similar to AA sequence:RefSeq:WP_016492774.1
class I adenylate-forming enzyme family protein
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: similar to AA sequence:RefSeq:WP_011381709.1
GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO:0042559 - pteridine-containing compound biosynthetic process [Evidence IEA]; GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019874798.1
COORDINATES: similar to AA sequence:RefSeq:WP_008374217.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976716.1
MaoC/PaaZ C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013958912.1
MaoC family dehydratase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008370382.1
COORDINATES: similar to AA sequence:RefSeq:WP_008370383.1
COORDINATES: similar to AA sequence:RefSeq:WP_008919844.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008370402.1
COORDINATES: similar to AA sequence:RefSeq:WP_013425385.1
COORDINATES: similar to AA sequence:RefSeq:WP_017875079.1
electron transfer flavoprotein-ubiquinone oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_004521353.1
acetyl-CoA C-acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_076612006.1
GO:0015074 - DNA integration [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003112650.1
GO:0007165 - signal transduction [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024140.2
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
MCP four helix bundle domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020653145.1
DDE-type integrase/transposase/recombinase
COORDINATES: similar to AA sequence:RefSeq:WP_014145067.1
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
branched-chain amino acid aminotransferase
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: protein motif:HMM:NF013736.2
COORDINATES: similar to AA sequence:RefSeq:WP_017875988.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008986 - pyruvate, water dikinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012079334.1
COORDINATES: similar to AA sequence:RefSeq:WP_019139813.1
COORDINATES: similar to AA sequence:RefSeq:WP_020657056.1
acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_020654401.1
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003100387.1
COORDINATES: similar to AA sequence:RefSeq:WP_006464589.1
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: similar to AA sequence:RefSeq:WP_012285975.1
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: similar to AA sequence:RefSeq:WP_005666879.1
COORDINATES: similar to AA sequence:RefSeq:WP_020798205.1
COORDINATES: similar to AA sequence:RefSeq:WP_018990572.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666884.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666886.1
COORDINATES: similar to AA sequence:RefSeq:WP_020798227.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666890.1
COORDINATES: similar to AA sequence:RefSeq:WP_003288949.1
COORDINATES: similar to AA sequence:RefSeq:WP_012285945.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005666895.1
COORDINATES: similar to AA sequence:RefSeq:WP_007942569.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666900.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666903.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666906.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005666907.1
COORDINATES: similar to AA sequence:RefSeq:WP_018990585.1
COORDINATES: similar to AA sequence:RefSeq:WP_007943812.1
COORDINATES: similar to AA sequence:RefSeq:WP_020296375.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666915.1
COORDINATES: similar to AA sequence:RefSeq:WP_003244809.1
COORDINATES: similar to AA sequence:RefSeq:WP_004350299.1
COORDINATES: similar to AA sequence:RefSeq:WP_003244720.1
COORDINATES: similar to AA sequence:RefSeq:WP_011301945.1
indolepyruvate ferredoxin oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005668874.1
COORDINATES: similar to AA sequence:RefSeq:WP_012761570.1
COORDINATES: similar to AA sequence:RefSeq:WP_003288971.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666929.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666930.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666932.1
COORDINATES: similar to AA sequence:RefSeq:WP_014338815.1
COORDINATES: similar to AA sequence:RefSeq:WP_013752686.1
COORDINATES: similar to AA sequence:RefSeq:WP_020798211.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666939.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666940.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666941.1
COORDINATES: similar to AA sequence:RefSeq:WP_018990619.1
COORDINATES: similar to AA sequence:RefSeq:WP_007942493.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666950.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666952.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666954.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666956.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666958.1
COORDINATES: similar to AA sequence:RefSeq:WP_020296333.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666961.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666963.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666965.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666967.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666968.1
COORDINATES: similar to AA sequence:RefSeq:WP_011493797.1
COORDINATES: similar to AA sequence:RefSeq:WP_020798230.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666975.1
COORDINATES: similar to AA sequence:RefSeq:WP_020798269.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005666981.1
COORDINATES: similar to AA sequence:RefSeq:WP_011285818.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666984.1
GO:0019380 - 3-phenylpropionate catabolic process [Evidence IEA]
3-phenylpropionate/cinnamic acid dioxygenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_005666985.1
aromatic ring-hydroxylating dioxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_005666986.1
COORDINATES: similar to AA sequence:RefSeq:WP_005666987.1
COORDINATES: similar to AA sequence:RefSeq:WP_011803385.1
COORDINATES: similar to AA sequence:RefSeq:WP_008448901.1
COORDINATES: similar to AA sequence:RefSeq:WP_017877429.1
COORDINATES: protein motif:HMM:TIGR00254.1
COORDINATES: similar to AA sequence:RefSeq:WP_008330325.1
GO:0046421 - methylisocitrate lyase activity [Evidence IEA]
GO:0019629 - propionate catabolic process, 2-methylcitrate cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014007509.1
GO:0050440 - 2-methylcitrate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018437205.1
GO:0047456 - 2-methylisocitrate dehydratase activity [Evidence IEA]
Fe/S-dependent 2-methylisocitrate dehydratase AcnD
COORDINATES: similar to AA sequence:RefSeq:WP_017776011.1
2-methylaconitate cis-trans isomerase PrpF
COORDINATES: protein motif:HMM:NF024996.2
COORDINATES: similar to AA sequence:RefSeq:WP_018433651.1
COORDINATES: similar to AA sequence:RefSeq:WP_013393833.1
COORDINATES: similar to AA sequence:RefSeq:WP_020798448.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha
COORDINATES: nucleotide motif:Rfam:14.4:RF00504
glycine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_019577534.1
COORDINATES: similar to AA sequence:RefSeq:WP_013959372.1
COORDINATES: protein motif:HMM:NF016777.2
COORDINATES: similar to AA sequence:RefSeq:WP_007943212.1
COORDINATES: similar to AA sequence:RefSeq:WP_018147729.1
COORDINATES: protein motif:HMM:NF036848.2
COORDINATES: similar to AA sequence:RefSeq:WP_018657171.1
COORDINATES: similar to AA sequence:RefSeq:WP_007943231.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007943234.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007943246.1
COORDINATES: similar to AA sequence:RefSeq:WP_019199811.1
COORDINATES: similar to AA sequence:RefSeq:WP_007943237.1
COORDINATES: similar to AA sequence:RefSeq:WP_012826813.1
COORDINATES: similar to AA sequence:RefSeq:WP_007943215.1
COORDINATES: similar to AA sequence:RefSeq:WP_011288085.1
COORDINATES: similar to AA sequence:RefSeq:WP_006575811.1
COORDINATES: similar to AA sequence:RefSeq:WP_019658400.1
COORDINATES: similar to AA sequence:RefSeq:WP_001189854.1
COORDINATES: similar to AA sequence:RefSeq:WP_018699780.1
COORDINATES: similar to AA sequence:RefSeq:WP_018991365.1
COORDINATES: protein motif:HMM:TIGR00369.1
COORDINATES: similar to AA sequence:RefSeq:WP_004618797.1
COORDINATES: similar to AA sequence:RefSeq:WP_007944999.1
COORDINATES: similar to AA sequence:RefSeq:WP_015451951.1
COORDINATES: similar to AA sequence:RefSeq:WP_015451952.1
COORDINATES: similar to AA sequence:RefSeq:WP_008904445.1
COORDINATES: similar to AA sequence:RefSeq:WP_004343354.1
COORDINATES: similar to AA sequence:RefSeq:WP_007943228.1
COORDINATES: similar to AA sequence:RefSeq:WP_020650342.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0009374 - biotin binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004736 - pyruvate carboxylase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008445988.1
COORDINATES: similar to AA sequence:RefSeq:WP_011870495.1
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014591656.1
COORDINATES: protein motif:HMM:NF024989.2
COORDINATES: similar to AA sequence:RefSeq:WP_007945028.1
COORDINATES: similar to AA sequence:RefSeq:WP_007945029.1
COORDINATES: similar to AA sequence:RefSeq:WP_007943207.1
COORDINATES: protein motif:HMM:NF018662.2
COORDINATES: protein motif:HMM:NF018716.2
COORDINATES: protein motif:HMM:NF026220.2
COORDINATES: similar to AA sequence:RefSeq:WP_016492340.1
COORDINATES: similar to AA sequence:RefSeq:WP_011254935.1
COORDINATES: similar to AA sequence:RefSeq:WP_011254934.1
COORDINATES: similar to AA sequence:RefSeq:WP_007943252.1
phenylacetate--CoA ligase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004618819.1
COORDINATES: similar to AA sequence:RefSeq:WP_017450461.1
COORDINATES: similar to AA sequence:RefSeq:WP_008618800.1
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: similar to AA sequence:RefSeq:WP_007439141.1
COORDINATES: similar to AA sequence:RefSeq:WP_006157918.1
COORDINATES: protein motif:HMM:NF014910.2
COORDINATES: similar to AA sequence:RefSeq:WP_016492729.1
COORDINATES: similar to AA sequence:RefSeq:WP_016492728.1
COORDINATES: protein motif:HMM:NF013775.2
COORDINATES: protein motif:HMM:NF037008.2
COORDINATES: protein motif:HMM:NF025343.2
COORDINATES: protein motif:HMM:NF037150.2
COORDINATES: similar to AA sequence:RefSeq:WP_013209736.1
GO:0004803 - transposase activity [Evidence IEA]
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: similar to AA sequence:RefSeq:WP_017450477.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003417044.1
COORDINATES: protein motif:HMM:NF012296.2
GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013427098.1
COORDINATES: protein motif:HMM:NF022586.2
COORDINATES: protein motif:HMM:NF024744.2
COORDINATES: similar to AA sequence:RefSeq:WP_020566013.1
COORDINATES: similar to AA sequence:RefSeq:WP_013233788.1
COORDINATES: protein motif:HMM:NF013180.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611949.1
COORDINATES: protein motif:HMM:NF016491.2
COORDINATES: similar to AA sequence:RefSeq:WP_018245402.1
COORDINATES: protein motif:HMM:NF019608.2
VirB4 family type IV secretion system protein
COORDINATES: similar to AA sequence:RefSeq:WP_007878035.1
GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]
ribonucleotide-diphosphate reductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_013699954.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_076611469.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: nucleotide motif:Rfam:14.4:RF01497
AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611586.1
COORDINATES: similar to AA sequence:RefSeq:WP_058167704.1
COORDINATES: similar to AA sequence:RefSeq:WP_003290589.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611587.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076612094.1
COORDINATES: similar to AA sequence:RefSeq:WP_017450355.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050461.1
COORDINATES: similar to AA sequence:RefSeq:WP_013235661.1
COORDINATES: similar to AA sequence:RefSeq:WP_007733299.1
COORDINATES: similar to AA sequence:RefSeq:WP_007836230.1
COORDINATES: similar to AA sequence:RefSeq:WP_019576532.1
COORDINATES: protein motif:HMM:NF037660.2
LuxR C-terminal-related transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_005268741.1
COORDINATES: protein motif:HMM:NF019640.2
COORDINATES: similar to AA sequence:RefSeq:WP_008348783.1
COORDINATES: similar to AA sequence:RefSeq:WP_019572284.1
COORDINATES: similar to AA sequence:RefSeq:WP_002941000.1
COORDINATES: similar to AA sequence:RefSeq:WP_011236912.1
COORDINATES: similar to AA sequence:RefSeq:WP_015635866.1
COORDINATES: similar to AA sequence:RefSeq:WP_007836232.1
COORDINATES: similar to AA sequence:RefSeq:WP_011238854.1
COORDINATES: protein motif:HMM:NF024834.2
COORDINATES: protein motif:HMM:NF005559.1
COORDINATES: protein motif:HMM:NF016210.2
COORDINATES: similar to AA sequence:RefSeq:WP_020656642.1
COORDINATES: similar to AA sequence:RefSeq:WP_017522579.1
COORDINATES: similar to AA sequence:RefSeq:WP_007856613.1
COORDINATES: similar to AA sequence:RefSeq:WP_004991982.1
COORDINATES: similar to AA sequence:RefSeq:WP_011295985.1
COORDINATES: similar to AA sequence:RefSeq:WP_007739373.1
aromatic acid/H+ symport family MFS transporter
COORDINATES: similar to AA sequence:RefSeq:WP_007577212.1
COORDINATES: similar to AA sequence:RefSeq:WP_003263495.1
sensor domain-containing diguanylate cyclase
COORDINATES: similar to AA sequence:RefSeq:WP_007946150.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011356745.1
COORDINATES: similar to AA sequence:RefSeq:WP_005031413.1
COORDINATES: similar to AA sequence:RefSeq:WP_017522467.1
COORDINATES: similar to AA sequence:RefSeq:WP_016449650.1
COORDINATES: similar to AA sequence:RefSeq:WP_004991980.1
COORDINATES: similar to AA sequence:RefSeq:WP_016832649.1
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase
COORDINATES: similar to AA sequence:RefSeq:WP_020652250.1
COORDINATES: protein motif:HMM:TIGR02293.1
COORDINATES: protein motif:HMM:NF020387.2
COORDINATES: protein motif:HMM:NF012245.2
COORDINATES: similar to AA sequence:RefSeq:WP_013014801.1
SMP-30/gluconolactonase/LRE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020655780.1
COORDINATES: similar to AA sequence:RefSeq:WP_009684873.1
COORDINATES: similar to AA sequence:RefSeq:WP_003200366.1
COORDINATES: similar to AA sequence:RefSeq:WP_003409419.1
COORDINATES: similar to AA sequence:RefSeq:WP_010395645.1
COORDINATES: similar to AA sequence:RefSeq:WP_012114408.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
prolyl oligopeptidase family serine peptidase
COORDINATES: similar to AA sequence:RefSeq:WP_013014803.1
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011494027.1
COORDINATES: similar to AA sequence:RefSeq:WP_019586023.1
COORDINATES: similar to AA sequence:RefSeq:WP_008062408.1
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010446633.1
COORDINATES: similar to AA sequence:RefSeq:WP_018600362.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977496.1
COORDINATES: similar to AA sequence:RefSeq:WP_005670565.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017774894.1
COORDINATES: similar to AA sequence:RefSeq:WP_020655600.1
COORDINATES: similar to AA sequence:RefSeq:WP_020654726.1
COORDINATES: similar to AA sequence:RefSeq:WP_020654725.1
COORDINATES: similar to AA sequence:RefSeq:WP_008493734.1
COORDINATES: similar to AA sequence:RefSeq:WP_017232607.1
COORDINATES: protein motif:HMM:NF012312.2
COORDINATES: similar to AA sequence:RefSeq:WP_007436171.1
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: similar to AA sequence:RefSeq:WP_010926000.1
COORDINATES: protein motif:HMM:NF012935.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors [Evidence IEA]
GMC family oxidoreductase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013014792.1
COORDINATES: similar to AA sequence:RefSeq:WP_011694037.1
COORDINATES: similar to AA sequence:RefSeq:WP_045911956.1
COORDINATES: similar to AA sequence:RefSeq:WP_005669923.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611588.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_076611384.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017904102.1
COORDINATES: similar to AA sequence:RefSeq:WP_013212291.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00080
yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_020702976.1
COORDINATES: similar to AA sequence:RefSeq:WP_013691200.1
COORDINATES: similar to AA sequence:RefSeq:WP_003546569.1
metal/formaldehyde-sensitive transcriptional repressor
COORDINATES: similar to AA sequence:RefSeq:WP_012217754.1
COORDINATES: similar to AA sequence:RefSeq:WP_014900637.1
GO:0008324 - cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
CDF family Co(II)/Ni(II) efflux transporter DmeF
COORDINATES: similar to AA sequence:RefSeq:WP_020749007.1
COORDINATES: similar to AA sequence:RefSeq:WP_019140805.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636773.1
COORDINATES: similar to AA sequence:RefSeq:WP_011711650.1
COORDINATES: protein motif:HMM:NF013235.2
COORDINATES: protein motif:HMM:NF025001.2
COORDINATES: protein motif:HMM:TIGR00180.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_005667038.1
glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase