Providencia sneebia DSM 19967 plasmid pPSN1, whole genome shotgun sequence.
type: Entry
definition: Providencia sneebia DSM 19967 plasmid pPSN1, whole genome shotgun sequence.
sequence version: NZ_CM001853.1
sequence date: 2023-05-14
sequence: sequence
division: CON
label: NZ_CM001853.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02428955
keyword: WGS
keyword: RefSeq
source: Providencia sneebia DSM 19967
organism: Providencia sneebia DSM 19967
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Morganellaceae; Providencia.
reference: 1
references: 23145767
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM001853.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SeqMan v. 8\nGenome Coverage :: 30.0x\nSequencing Technology :: 454\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/14/2023 09:46:31\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,240\nCDSs (total) :: 3,168\nGenes (coding) :: 2,964\nCDSs (with protein) :: 2,964\nGenes (RNA) :: 72\nrRNAs :: 5, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 1, 1 (5S, 16S, 23S)\ntRNAs :: 58\nncRNAs :: 7\nPseudo Genes (total) :: 204\nCDSs (without protein) :: 204\nPseudo Genes (ambiguous residues) :: 0 of 204\nPseudo Genes (frameshifted) :: 86 of 204\nPseudo Genes (incomplete) :: 126 of 204\nPseudo Genes (internal stop) :: 14 of 204\nPseudo Genes (multiple problems) :: 19 of 204\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 10787
topology: circular
so has quality: SO_0000988
location: 1..10787
location: region:1-10787:1
RO_0002162: 1141660

NZ_CM001853
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02428955
type: BioSample
SIO_000068: biosample

1
title: Comparative genomics of bacteria in the genus Providencia isolated from wild Drosophila melanogaster
author: Galac, M.R.
author: Lazzaro, B.P.
journal: BMC Genomics 13, 612 (2012)
pubmed: 23145767
comments: Publication Status: Online-Only

23145767
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Galac, M.R.
author: Lazzaro, B.P.
journal: Submitted (08-JUN-2012) Field of Genetics & Development, Cornell University, 3125 Comstock Hall, Ithaca, NY 14850, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10787:1
position: 10787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-10787:1:source
so part of: sequence
organism: Providencia sneebia DSM 19967
mol type: genomic DNA
strain: DSM 19967
isolation source: wild caught Drosophila melanogaster hemolymph
host: Drosophila melanogaster
culture collection: DSM:19967
type material: type strain of Providencia sneebia
plasmid: pPSN1
country: USA: State College, PA
collection date: 1999

1141660
type: Taxonomy
SIO_000068: taxonomy

OO7_RS15975
type: Gene
subclass of: SO_0000704
RO_0002162: 1141660
locus tag: OO7_RS15975
old locus tag: OO7_16305
so part of: sequence
location: join(10103..10787,1..53)
location: region:1-10787:1
so has part: feature:10103-10787:1:exon
so has part: feature:1-53:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:10103-10787:1:exon

position:10103:1
position: 10103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-53:1:exon

position:53:1
position: 53
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OO7_RS15975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1141660
locus tag: OO7_RS15975
old locus tag: OO7_16305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001281399.1
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: replication initiation protein
translation: MSELIAYKSNALIEASYKLTLQEQRLLLMCIGKLNPQDQAPQKAFKITSGDFYLAFPDMGKSNAERHLKEAIDKLADRWIYIQNNNERRRIRWIQEEAEYFDGEGKIEIVFADSIMPYLTQLQGQFTKIVIKNVSTLKSVYSIRLYELLMQFKVIGDRLISIDDFRSMLGLDEKKYATFKSLNQWVIKPAIKELNQKSNLSVSVDTVKKGRSVFALHFHFKEDQQIKMMLEDWLWLWYQSVRQQD
SIO_010081: OO7_RS15975
subclass of: SO_0000673
so part of: OO7_RS15975
location: join(10103..10787,1..53)
location: region:1-10787:1
so has part: feature:10103-10787:1:exon
so has part: feature:1-53:1:exon

WP_282553640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10103-10787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-53:1:exon

OO7_RS15980
type: Gene
subclass of: SO_0000704
RO_0002162: 1141660
locus tag: OO7_RS15980
old locus tag: OO7_16245
so part of: sequence
location: 17..445
location: region:17-445:1
so has part: feature:17-445:1:exon
subclass of: SO_0000010

position:17:1
position: 17
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445:1
position: 445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17-445:1:exon

OO7_RS15980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1141660
locus tag: OO7_RS15980
old locus tag: OO7_16245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006816427.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: entry exclusion protein 1
translation: MALVSISEAARLTGKARSTLHKYINQGKLSTTTDKNTGSKSIETSELIRVFGEISNSTTTCSDSVTHVSKQQQETSNDTQLLQTKLQLLEQENAHLKAEKELLSKNLDDIRQAMLLIESKLPTTPEPVAPASTKKPWQFWKK
SIO_010081: OO7_RS15980
subclass of: SO_0000673
so part of: OO7_RS15980
location: 17..445
location: region:17-445:1
so has part: feature:17-445:1:exon

WP_043892931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17-445:1:exon

OO7_RS15985
type: Gene
subclass of: SO_0000704
RO_0002162: 1141660
locus tag: OO7_RS15985
old locus tag: OO7_16250
so part of: sequence
location: 759..1154
location: region:759-1154:1
so has part: feature:759-1154:1:exon
subclass of: SO_0000010

position:759:1
position: 759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1154:1
position: 1154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:759-1154:1:exon

OO7_RS15985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1141660
locus tag: OO7_RS15985
old locus tag: OO7_16250
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKHQIIMRIIGSKQGLITKDLSNSKNDAVLINSIGYSREKDENGTPILRLTIDKDLDHSTEFIFDAIKNDEKVDMTIKYFIEGEEPSIINYSNVIIDRIQSLFCAEGFNFDDNLAIRQGKPYELIQLISYN
SIO_010081: OO7_RS15985
subclass of: SO_0000673
so part of: OO7_RS15985
location: 759..1154
location: region:759-1154:1
so has part: feature:759-1154:1:exon

WP_008916976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:759-1154:1:exon

OO7_RS15995
type: Gene
subclass of: SO_0000704
RO_0002162: 1141660
locus tag: OO7_RS15995
old locus tag: OO7_16260
so part of: sequence
location: complement(1543..2514)
location: region:1543-2514:-1
so has part: feature:1543-2514:-1:exon
subclass of: SO_0000010

position:1543:-1
position: 1543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2514:-1
position: 2514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1543-2514:-1:exon

OO7_RS15995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1141660
locus tag: OO7_RS15995
old locus tag: OO7_16260
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MFSSPEETFEWYANELRKISELSARYFLDDPYCKQGYRSEINEVIRLIRADFNIALYNNNARHQRIDGTRDWVKENIGSTGNWPDIYKYTEEIKLEFESEKSAYSALRKSSKELYNATRSYFGEGWAFYSDKTGDILGGVLQTAAGFFTYRVGSTIKSVPMKGAGFSGMIIGLGKAHQGVSDIVYEFTDSEINMGDNFAILGIEKGVNLFGGDKATAKKVYYDLDFVTSLYMGFAAYKVVDPIKRTQIRRLPTETPQGLKRVTFFEKYFPDNVGFRIVRWTNENFKRKLTSTNKLLLLASAGSSIQKLRLVLEQYEKKEWTSI
SIO_010081: OO7_RS15995
subclass of: SO_0000673
so part of: OO7_RS15995
location: complement(1543..2514)
location: region:1543-2514:-1
so has part: feature:1543-2514:-1:exon

WP_282553641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1543-2514:-1:exon

OO7_RS16000
type: Gene
subclass of: SO_0000704
RO_0002162: 1141660
locus tag: OO7_RS16000
old locus tag: OO7_16265
so part of: sequence
location: complement(2514..2993)
location: region:2514-2993:-1
so has part: feature:2514-2993:-1:exon
subclass of: SO_0000010

position:2993:-1
position: 2993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2514-2993:-1:exon

OO7_RS16000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1141660
locus tag: OO7_RS16000
old locus tag: OO7_16265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004243590.1
GO process: GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: Hcp family type VI secretion system effector
translation: MANIIYLTLEGNKQGLISKGCSTIDSIGNKYQKGHENEILIHELSSNLSMHQNVSFQPISIRKPIDKSSPLLSQALTSSEILTCDFAFYRTSMNGGLELYYKIKLTEASIVDLNCFYPNSITHNQAQPEESVSFRFKSVTWEHVIAGTSTYSIWEERSF
SIO_010081: OO7_RS16000
subclass of: SO_0000673
so part of: OO7_RS16000
location: complement(2514..2993)
location: region:2514-2993:-1
so has part: feature:2514-2993:-1:exon

WP_008916979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2514-2993:-1:exon

OO7_RS16995
type: Gene
subclass of: SO_0000704
RO_0002162: 1141660
locus tag: OO7_RS16995
old locus tag: OO7_16270
so part of: sequence
location: complement(3152..3322)
location: region:3152-3322:-1
so has part: feature:3152-3322:-1:exon
subclass of: SO_0000010

position:3152:-1
position: 3152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3322:-1
position: 3322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3152-3322:-1:exon

OO7_RS16995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1141660
locus tag: OO7_RS16995
old locus tag: OO7_16270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005074609.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MSKSPIGTTGTTGQKCPESGVWKVVGTPSTTAPIAKGNTFPPYDNKAVTWQLIQYA
SIO_010081: OO7_RS16995
subclass of: SO_0000673
so part of: OO7_RS16995
location: complement(3152..3322)
location: region:3152-3322:-1
so has part: feature:3152-3322:-1:exon

WP_008916980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3152-3322:-1:exon

OO7_RS16005
type: Gene
subclass of: SO_0000704
RO_0002162: 1141660
locus tag: OO7_RS16005
old locus tag: OO7_16275
so part of: sequence
location: 3846..4130
location: region:3846-4130:1
so has part: feature:3846-4130:1:exon
subclass of: SO_0000010

position:3846:1
position: 3846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4130:1
position: 4130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3846-4130:1:exon

OO7_RS16005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1141660
locus tag: OO7_RS16005
old locus tag: OO7_16275
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MSVKSKGACPFCNEQIVPIIVEENSIRRDKCQCPECSGIVYVCRSPGCNNYTKGGDFWDDELCPSCTDGISGNVKGVAVISAVGLLFSAFQKKD
SIO_010081: OO7_RS16005
subclass of: SO_0000673
so part of: OO7_RS16005
location: 3846..4130
location: region:3846-4130:1
so has part: feature:3846-4130:1:exon

WP_008916981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3846-4130:1:exon

OO7_RS16010
type: Gene
subclass of: SO_0000704
RO_0002162: 1141660
locus tag: OO7_RS16010
old locus tag: OO7_16280
so part of: sequence
location: 4233..4535
location: region:4233-4535:1
so has part: feature:4233-4535:1:exon
subclass of: SO_0000010

position:4233:1
position: 4233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4535:1
position: 4535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4233-4535:1:exon

OO7_RS16010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1141660
locus tag: OO7_RS16010
old locus tag: OO7_16280
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MSKSDRKFVNLSQDHELEDWLYRNKFSKKEENLNELIEIINNNVKDGNTSDNITWEELDSALKNNRDWFISLVAVGEWFLGSYKTHYVKRESLVPKTARL
SIO_010081: OO7_RS16010
subclass of: SO_0000673
so part of: OO7_RS16010
location: 4233..4535
location: region:4233-4535:1
so has part: feature:4233-4535:1:exon

WP_282553642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4233-4535:1:exon

OO7_RS16015
type: Gene
subclass of: SO_0000704
RO_0002162: 1141660
gene: dcm
locus tag: OO7_RS16015
old locus tag: OO7_16285
so part of: sequence
location: complement(4890..5888)
location: region:4890-5888:-1
so has part: feature:4890-5888:-1:exon
subclass of: SO_0000010

position:4890:-1
position: 4890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5888:-1
position: 5888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4890-5888:-1:exon

OO7_RS16015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1141660
gene: dcm
locus tag: OO7_RS16015
old locus tag: OO7_16285
EC number: 2.1.1.37
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000734157.1
GO function: GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: DNA (cytosine-5-)-methyltransferase
translation: MSKLKAVSLFCGCGGTDVGLKGDFQFLGQHYASNDIDIIFANDIEPKAIEILEKNFTCPTFVGDIKQLDHSLIPEHDLLTGGFPCQSFSIVAQNPPRLGIKDEKGELFFEMCKVLKEKKPSVFIAENVKGILSANNKKAFPLILEEFKKSGYHVTWKLLNSVDFGVPQKRERVFIVGFKSESHFNNFKFPILNNIKKATLADVIFPECDIDAKYYFSERAVQGLLNSNKKMNKGRAQDVDQPCNTVGAHLAKVSLNSTDPVLCIDGKYRRFTPREVARIQSFPDSFKLVGSDSSQYKALGNAIPPVMFWHLVQEIKIALNIDITPLKKVVWF
SIO_010081: OO7_RS16015
subclass of: SO_0000673
so part of: OO7_RS16015
location: complement(4890..5888)
location: region:4890-5888:-1
so has part: feature:4890-5888:-1:exon

WP_282553643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4890-5888:-1:exon

OO7_RS16020
type: Gene
subclass of: SO_0000704
RO_0002162: 1141660
locus tag: OO7_RS16020
old locus tag: OO7_16290
so part of: sequence
location: complement(5881..7221)
location: region:5881-7221:-1
so has part: feature:5881-7221:-1:exon
subclass of: SO_0000010

position:5881:-1
position: 5881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7221:-1
position: 7221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5881-7221:-1:exon

OO7_RS16020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1141660
locus tag: OO7_RS16020
old locus tag: OO7_16290
inference: COORDINATES: protein motif:HMM:NF022996.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: DUF3883 domain-containing protein
translation: MYKIPTKFYQRLHHPRPRFKSNIENVLGYMSFSIAELDGETESVFKEKILSAINDFPGNEGVTLKTLNNWRTEITALFSMVNTKNNCNFATDLSKELANTTNLKEFFLRFISTFQYPGGFLKNNEIEKIIISDIHFHPLLWLACFYNSSAISEEDLYITDVEFCHCVLNDLRVTRDHEDISATIGRILYNRKNEVNYDTAGDIKRYALDILDYCVLAGLMLKDYKGKFFFRDDAKEFLSYFKDHAPIFKYYQKSHTLKQLESLKSEWIHFVNDSSKLLLKSFEEKISKKTSIPSDRLAFITKQIGDEGEALTLAHEKIWLSNNGRPDLAKLVSHMPTQFAVGYDVLSRELDSTMRHIEVKTTVSLKDFTVNRVHLTPNEWAAAESHRDRYFVYRLQLSDESYTLWIIQDPVGLYKQDRIKMVPRNGADIYFNENCYTQVELLRTYE
SIO_010081: OO7_RS16020
subclass of: SO_0000673
so part of: OO7_RS16020
location: complement(5881..7221)
location: region:5881-7221:-1
so has part: feature:5881-7221:-1:exon

WP_008916984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5881-7221:-1:exon

OO7_RS16025
type: Gene
subclass of: SO_0000704
RO_0002162: 1141660
locus tag: OO7_RS16025
old locus tag: OO7_16295
so part of: sequence
location: complement(7222..8283)
location: region:7222-8283:-1
so has part: feature:7222-8283:-1:exon
subclass of: SO_0000010

position:7222:-1
position: 7222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8283:-1
position: 8283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7222-8283:-1:exon

OO7_RS16025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1141660
locus tag: OO7_RS16025
old locus tag: OO7_16295
EC number: 2.1.1.37
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001185453.1
GO function: GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: DNA cytosine methyltransferase
translation: MPNVVDLFCGCGGLSYGFEQEGFKTVLGIDHDKAALKTFKLNHKDAKTILGDIREISNQQILDKLNGCSIDVVIGGPPCQGLSLSGPRKLEDPRNQLYLSFIRIVSLLNPKYVLIENVPGIISLFKGKIKDEIIKSLETLGYTVNFQVLKASEYGVPQHRRRVFFIGTKAMEKFDFPLPTHKEQEDLIFKKMISTYDALHDLPVLENELGETIQEYALPIQNAYQELMRFNSSHVLNHIAANHSEKVKETIKLVPPGKNYKALPEELKNSRNFNVAWTRFPDHAPSPTIDTGHRHHFHYYANRVPTVRECARLQSFPDRFEFIGNKTEQFRQVGNAVPPILAQALAKKILEKL
SIO_010081: OO7_RS16025
subclass of: SO_0000673
so part of: OO7_RS16025
location: complement(7222..8283)
location: region:7222-8283:-1
so has part: feature:7222-8283:-1:exon

WP_008916985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7222-8283:-1:exon

OO7_RS16030
type: Gene
subclass of: SO_0000704
RO_0002162: 1141660
locus tag: OO7_RS16030
old locus tag: OO7_16300
so part of: sequence
location: complement(8592..8969)
location: region:8592-8969:-1
so has part: feature:8592-8969:-1:exon
subclass of: SO_0000010

position:8592:-1
position: 8592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8969:-1
position: 8969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8592-8969:-1:exon

OO7_RS16030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1141660
locus tag: OO7_RS16030
old locus tag: OO7_16300
inference: COORDINATES: protein motif:HMM:NF017105.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: relaxosome protein TraM
translation: MPKQHIYLPQKTLDKIKSMVDERLNHGATHADANISKLCVEMINIGIRAFEYHQNKNKQPEPEIDKMKVMMESLLKTQLCVQNILEMQFSLQEIKEDSRYNFTEKKAEIIQATQSGLEPFYPSKK
SIO_010081: OO7_RS16030
subclass of: SO_0000673
so part of: OO7_RS16030
location: complement(8592..8969)
location: region:8592-8969:-1
so has part: feature:8592-8969:-1:exon

WP_008916986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8592-8969:-1:exon