Rhizobium binae strain BLR195 plasmid p3, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
Comparative genomic analysis of Rhizobium strains in Lentils
Submitted (09-MAR-2021) Department of Plant Pathology, Zhejiang University, Yuhangtang, Hangzhou, Zhejiang 310058, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP071607.1.\nBacteria and source DNA available from UC Davis Douglas Cook Lab.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SPAdes v. 3.14\nAssembly Name :: Rhizobium_binae_BLR195\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 300.0x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/08/2023 03:08:10\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,840\nCDSs (total) :: 6,776\nGenes (coding) :: 6,500\nCDSs (with protein) :: 6,500\nGenes (RNA) :: 64\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 51\nncRNAs :: 4\nPseudo Genes (total) :: 276\nCDSs (without protein) :: 276\nPseudo Genes (ambiguous residues) :: 0 of 276\nPseudo Genes (frameshifted) :: 176 of 276\nPseudo Genes (incomplete) :: 178 of 276\nPseudo Genes (internal stop) :: 39 of 276\nPseudo Genes (multiple problems) :: 104 of 276\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_012555375.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007628179.1
COORDINATES: similar to AA sequence:RefSeq:WP_017996850.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654579.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736793.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246224.1
COORDINATES: similar to AA sequence:RefSeq:WP_007628184.1
COORDINATES: similar to AA sequence:RefSeq:WP_003575194.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_003553464.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968553.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006878 - cellular copper ion homeostasis [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
Cu(I)-responsive transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011654772.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003548308.1
GO:0047470 - (1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity [Evidence IEA]
GO:0005992 - trehalose biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003548310.1
GO:0009274 - peptidoglycan-based cell wall [Evidence IEA]
GO:0003824 - catalytic activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016736498.1
COORDINATES: similar to AA sequence:RefSeq:WP_018071573.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: similar to AA sequence:RefSeq:WP_012763567.1
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003575209.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957788.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018494447.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003548324.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957791.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_003548350.1
COORDINATES: similar to AA sequence:RefSeq:WP_020052908.1
COORDINATES: similar to AA sequence:RefSeq:WP_012763461.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563528.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016557551.1
COORDINATES: similar to AA sequence:RefSeq:WP_018236701.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015886741.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018236699.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015886739.1
COORDINATES: similar to AA sequence:RefSeq:WP_018236697.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004672703.1
PAS domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_003539912.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_004679729.1
COORDINATES: similar to AA sequence:RefSeq:WP_012763555.1
GO:0009486 - cytochrome bo3 ubiquinol oxidase activity [Evidence IEA]
GO:0015990 - electron transport coupled proton transport [Evidence IEA]
cytochrome o ubiquinol oxidase subunit IV
COORDINATES: similar to AA sequence:RefSeq:WP_016557555.1
cytochrome o ubiquinol oxidase subunit III
COORDINATES: similar to AA sequence:RefSeq:WP_012763554.1
cytochrome o ubiquinol oxidase subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_011654798.1
COORDINATES: similar to AA sequence:RefSeq:WP_003575233.1
COORDINATES: similar to AA sequence:RefSeq:WP_004679740.1
COORDINATES: similar to AA sequence:RefSeq:WP_014857614.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018324899.1
COORDINATES: similar to AA sequence:RefSeq:WP_018324900.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
saccharopine dehydrogenase NADP-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018494426.1
GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: protein motif:HMM:NF012376.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004679746.1
GO:0030551 - cyclic nucleotide binding [Evidence IEA]
cyclic nucleotide-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018071539.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736517.1
GO:0016758 - hexosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004679752.1
COORDINATES: similar to AA sequence:RefSeq:WP_018482599.1
COORDINATES: similar to AA sequence:RefSeq:WP_012490432.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003595069.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246262.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003548396.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003553531.1
adenylate/guanylate cyclase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011654809.1
COORDINATES: similar to AA sequence:RefSeq:WP_008531626.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246267.1
COORDINATES: similar to AA sequence:RefSeq:WP_012757393.1
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018246270.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957823.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018071515.1
GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018071514.1
COORDINATES: similar to AA sequence:RefSeq:WP_018448801.1
COORDINATES: similar to AA sequence:RefSeq:WP_004672843.1
COORDINATES: similar to AA sequence:RefSeq:WP_018071511.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246277.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968222.1
COORDINATES: similar to AA sequence:RefSeq:WP_003590787.1
COORDINATES: similar to AA sequence:RefSeq:WP_012490440.1
COORDINATES: similar to AA sequence:RefSeq:WP_008533726.1
ankyrin repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017991890.1
COORDINATES: similar to AA sequence:RefSeq:WP_018517801.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555322.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020052941.1
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012490445.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427911.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736531.1
COORDINATES: similar to AA sequence:RefSeq:WP_018494398.1
GO:0047472 - 3-carboxy-cis,cis-muconate cycloisomerase activity [Evidence IEA]
3-carboxy-cis,cis-muconate cycloisomerase
COORDINATES: similar to AA sequence:RefSeq:WP_020052958.1
GO:0018578 - protocatechuate 3,4-dioxygenase activity [Evidence IEA]
GO:0046278 - 3,4-dihydroxybenzoate metabolic process [Evidence IEA]
protocatechuate 3,4-dioxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_003563421.1
protocatechuate 3,4-dioxygenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_007627333.1
GO:0047575 - 4-carboxymuconolactone decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003548464.1
GO:0047570 - 3-oxoadipate enol-lactonase activity [Evidence IEA]
GO:0042952 - beta-ketoadipate pathway [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008531674.1
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific [Evidence IEA]
GO:0019619 - 3,4-dihydroxybenzoate catabolic process [Evidence IEA]; GO:0045893 - positive regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018448821.1
COORDINATES: similar to AA sequence:RefSeq:WP_012490455.1
COORDINATES: similar to AA sequence:RefSeq:WP_017991861.1
COORDINATES: similar to AA sequence:RefSeq:WP_015007184.1
COORDINATES: similar to AA sequence:RefSeq:WP_008531683.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548645.1
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004673855.1
COORDINATES: similar to AA sequence:RefSeq:WP_010973441.1
GO:0016153 - urocanate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011427929.1
GO:0050129 - N-formylglutamate deformylase activity [Evidence IEA]
GO:0019557 - histidine catabolic process to glutamate and formate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011652356.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
diaminohydroxyphosphoribosylaminopyrimidine deaminase
COORDINATES: similar to AA sequence:RefSeq:WP_008531694.1
GO:0004397 - histidine ammonia-lyase activity [Evidence IEA]
GO:0006548 - histidine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018448832.1
GO:0050480 - imidazolonepropionase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003563391.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008531697.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427934.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427935.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012555285.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015837 - amine transport [Evidence IEA]
The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007795665.1
COORDINATES: similar to AA sequence:RefSeq:WP_007536094.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012490477.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736560.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555279.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563356.1
mechanosensitive ion channel family protein
COORDINATES: protein motif:HMM:NF024110.2
COORDINATES: similar to AA sequence:RefSeq:WP_019858718.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563350.1
COORDINATES: similar to AA sequence:RefSeq:WP_010006063.1
COORDINATES: similar to AA sequence:RefSeq:WP_020053007.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011654990.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003595176.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018483013.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654993.1
COORDINATES: similar to AA sequence:RefSeq:WP_020486265.1
COORDINATES: similar to AA sequence:RefSeq:WP_018483016.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957905.1
COORDINATES: similar to AA sequence:RefSeq:WP_018497059.1
COORDINATES: similar to AA sequence:RefSeq:WP_018859795.1
GO:0008171 - O-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007690709.1
COORDINATES: protein motif:HMM:TIGR00254.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018493549.1
COORDINATES: similar to AA sequence:RefSeq:WP_018481153.1
COORDINATES: similar to AA sequence:RefSeq:WP_011655001.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736591.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736592.1
COORDINATES: similar to AA sequence:RefSeq:WP_004669704.1
GO:0009190 - cyclic nucleotide biosynthetic process [Evidence IEA]; GO:0035556 - intracellular signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011428013.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010474295.1
COORDINATES: protein motif:HMM:NF018294.2
COORDINATES: similar to AA sequence:RefSeq:WP_011428015.1
COORDINATES: similar to AA sequence:RefSeq:WP_017996527.1
COORDINATES: protein motif:HMM:NF017267.2
COORDINATES: similar to AA sequence:RefSeq:WP_003517424.1
COORDINATES: similar to AA sequence:RefSeq:WP_018068496.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012490530.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555260.1
COORDINATES: similar to AA sequence:RefSeq:WP_020053049.1
COORDINATES: similar to AA sequence:RefSeq:WP_018448475.1
COORDINATES: similar to AA sequence:RefSeq:WP_018071047.1
COORDINATES: similar to AA sequence:RefSeq:WP_020053052.1
COORDINATES: similar to AA sequence:RefSeq:WP_003594487.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012555254.1
COORDINATES: similar to AA sequence:RefSeq:WP_003594495.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018497112.1
IclR family transcriptional regulator C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003519796.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003564086.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548916.1
GO:0019619 - 3,4-dihydroxybenzoate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017957941.1
transglutaminase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018071055.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020053071.1
COORDINATES: similar to AA sequence:RefSeq:WP_018494996.1
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012763534.1
GO:0006885 - regulation of pH [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012763320.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_020053077.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018448493.1
COORDINATES: similar to AA sequence:RefSeq:WP_018071060.1
COORDINATES: similar to AA sequence:RefSeq:WP_003574656.1
GO:0043295 - glutathione binding [Evidence IEA]
GO:0006749 - glutathione metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003526554.1
COORDINATES: similar to AA sequence:RefSeq:WP_011426236.1
COORDINATES: similar to AA sequence:RefSeq:WP_018484598.1
3-deoxy-manno-octulosonate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011428066.1
COORDINATES: similar to AA sequence:RefSeq:WP_018448497.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020493447.1
COORDINATES: similar to AA sequence:RefSeq:WP_017992129.1
COORDINATES: similar to AA sequence:RefSeq:WP_012763312.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736630.1
This protein belongs to the uracil DNA glycosylase superfamily, members of which act in excision repair of DNA. However, it belongs more specifically to UdgX branch, whose founding member was found to bind uracil in DNA (where it does not belong), without cleaving it, appears to promote DNA repair by a pathway involving RecA, rather than base excision; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018448506.1
phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017957956.1
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011428096.1
COORDINATES: similar to AA sequence:RefSeq:WP_018071088.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_003564056.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246492.1
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003574686.1
COORDINATES: similar to AA sequence:RefSeq:WP_015343031.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017996489.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_016736646.1
GO:0045027 - DNA end binding [Evidence IEA]
GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011428104.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736648.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003910 - DNA ligase (ATP) activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016736649.1
COORDINATES: similar to AA sequence:RefSeq:WP_003594552.1
GO:0045148 - tripeptide aminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018071096.1
COORDINATES: similar to AA sequence:RefSeq:WP_003553934.1
sulfate/molybdate ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018497142.1
GO:0015419 - ABC-type sulfate transporter activity [Evidence IEA]
GO:0008272 - sulfate transport [Evidence IEA]
sulfate ABC transporter permease subunit CysW
COORDINATES: similar to AA sequence:RefSeq:WP_008531845.1
sulfate ABC transporter permease subunit CysT
COORDINATES: similar to AA sequence:RefSeq:WP_012490583.1
sulfate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003594564.1
COORDINATES: similar to AA sequence:RefSeq:WP_003564034.1
COORDINATES: similar to AA sequence:RefSeq:WP_007627529.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018071104.1
COORDINATES: similar to AA sequence:RefSeq:WP_020052649.1
GO:0008556 - P-type potassium transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
potassium-transporting ATPase subunit KdpC
COORDINATES: similar to AA sequence:RefSeq:WP_018448527.1
GO:0031004 - potassium ion-transporting ATPase complex [Evidence IEA]
potassium-transporting ATPase subunit KdpB
COORDINATES: similar to AA sequence:RefSeq:WP_011655123.1
potassium-transporting ATPase subunit KdpA
COORDINATES: similar to AA sequence:RefSeq:WP_003594574.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428121.1
COORDINATES: similar to AA sequence:RefSeq:WP_018448530.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968360.1
COORDINATES: similar to AA sequence:RefSeq:WP_003564015.1
GO:0045454 - cell redox homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003553906.1
COORDINATES: similar to AA sequence:RefSeq:WP_004678069.1
COORDINATES: similar to AA sequence:RefSeq:WP_008531876.1
COORDINATES: similar to AA sequence:RefSeq:WP_007627569.1
COORDINATES: similar to AA sequence:RefSeq:WP_018068989.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968366.1
COORDINATES: similar to AA sequence:RefSeq:WP_004678060.1
COORDINATES: similar to AA sequence:RefSeq:WP_020397477.1
COORDINATES: similar to AA sequence:RefSeq:WP_012067080.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_018246524.1
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018483418.1
COORDINATES: similar to AA sequence:RefSeq:WP_017958013.1
GO:0008442 - 3-hydroxyisobutyrate dehydrogenase activity [Evidence IEA]
GO:0006574 - valine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012555188.1
COORDINATES: similar to AA sequence:RefSeq:WP_007627584.1
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018896525.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019200 - carbohydrate kinase activity [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003547822.1
GO:0016857 - racemase and epimerase activity, acting on carbohydrates and derivatives [Evidence IEA]
GO:0019301 - rhamnose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003547824.1
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003547826.1
COORDINATES: similar to AA sequence:RefSeq:WP_020487095.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009363822.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0033296 - rhamnose binding [Evidence IEA]; GO:0015153 - rhamnose transmembrane transporter activity [Evidence IEA]
GO:0015762 - rhamnose transmembrane transport [Evidence IEA]
rhamnose ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011655152.1
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_003563981.1
bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_018246535.1
GO:0008740 - L-rhamnose isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003547836.1
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003547838.1
COORDINATES: similar to AA sequence:RefSeq:WP_003574767.1
GO:0019213 - deacetylase activity [Evidence IEA]; GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
amidohydrolase/deacetylase family metallohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_008531919.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555172.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563963.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555169.1
COORDINATES: similar to AA sequence:RefSeq:WP_004675829.1
COORDINATES: similar to AA sequence:RefSeq:WP_003547852.1
COORDINATES: similar to AA sequence:RefSeq:WP_004675827.1
COORDINATES: similar to AA sequence:RefSeq:WP_011655162.1
COORDINATES: similar to AA sequence:RefSeq:WP_012763256.1
COORDINATES: similar to AA sequence:RefSeq:WP_018448561.1
COORDINATES: similar to AA sequence:RefSeq:WP_017958041.1
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003594646.1
COORDINATES: similar to AA sequence:RefSeq:WP_004669097.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736693.1
COORDINATES: similar to AA sequence:RefSeq:WP_020052695.1
COORDINATES: similar to AA sequence:RefSeq:WP_003547872.1
COORDINATES: similar to AA sequence:RefSeq:WP_003574806.1
COORDINATES: similar to AA sequence:RefSeq:WP_012490631.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428184.1
COORDINATES: similar to AA sequence:RefSeq:WP_020052701.1
COORDINATES: similar to AA sequence:RefSeq:WP_020052702.1
COORDINATES: similar to AA sequence:RefSeq:WP_011655175.1
COORDINATES: similar to AA sequence:RefSeq:WP_018495201.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428189.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_003547890.1
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018246564.1
GO:0004417 - hydroxyethylthiazole kinase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_018483448.1
invasion associated locus B family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018246566.1
GO:0046930 - pore complex [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
GO:0006811 - monoatomic ion transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]
ShlB/FhaC/HecB family hemolysin secretion/activation protein
COORDINATES: similar to AA sequence:RefSeq:WP_003563922.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968406.1
COORDINATES: protein motif:HMM:NF013677.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008491906.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_011053350.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003547934.1
COORDINATES: similar to AA sequence:RefSeq:WP_007811349.1
COORDINATES: similar to AA sequence:RefSeq:WP_011970376.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612330.1
COORDINATES: similar to AA sequence:RefSeq:WP_004672413.1
COORDINATES: similar to AA sequence:RefSeq:WP_018448592.1
COORDINATES: similar to AA sequence:RefSeq:WP_008531968.1
COORDINATES: similar to AA sequence:RefSeq:WP_018448594.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968418.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_003574839.1
COORDINATES: similar to AA sequence:RefSeq:WP_018495184.1
GO:0004037 - allantoicase activity [Evidence IEA]; GO:0071522 - ureidoglycine aminohydrolase activity [Evidence IEA]
GO:0010136 - ureide catabolic process [Evidence IEA]
bifunctional allantoicase/(S)-ureidoglycine aminohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_003574842.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736710.1
COORDINATES: similar to AA sequence:RefSeq:WP_003594680.1
GO:0015171 - amino acid transmembrane transporter activity [Evidence IEA]
GO:0006865 - amino acid transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012555127.1
COORDINATES: similar to AA sequence:RefSeq:WP_004672424.1
GO:0008797 - aspartate ammonia-lyase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018496104.1
COORDINATES: similar to AA sequence:RefSeq:WP_003574853.1
COORDINATES: similar to AA sequence:RefSeq:WP_007537284.1
COORDINATES: similar to AA sequence:RefSeq:WP_007826659.1
COORDINATES: similar to AA sequence:RefSeq:WP_003576343.1
COORDINATES: similar to AA sequence:RefSeq:WP_018855620.1
isochorismatase family cysteine hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_007537276.1
COORDINATES: similar to AA sequence:RefSeq:WP_017992578.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654375.1
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016735446.1
COORDINATES: similar to AA sequence:RefSeq:WP_008535662.1
COORDINATES: similar to AA sequence:RefSeq:WP_017956501.1
aromatic acid/H+ symport family MFS transporter
COORDINATES: similar to AA sequence:RefSeq:WP_003594732.1
COORDINATES: similar to AA sequence:RefSeq:WP_018480284.1
COORDINATES: similar to AA sequence:RefSeq:WP_003550799.1
COORDINATES: similar to AA sequence:RefSeq:WP_011594776.1
COORDINATES: similar to AA sequence:RefSeq:WP_020046994.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0018506 - maleylacetate reductase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017967613.1
COORDINATES: similar to AA sequence:RefSeq:WP_020046996.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012490657.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012555661.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736717.1
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_016736718.1
COORDINATES: similar to AA sequence:RefSeq:WP_017275111.1
COORDINATES: similar to AA sequence:RefSeq:WP_018209289.1
COORDINATES: similar to AA sequence:RefSeq:WP_018446427.1
COORDINATES: similar to AA sequence:RefSeq:WP_007814614.1
ABC transporter ATP-binding protein/permease
COORDINATES: protein motif:HMM:NF024304.2
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018246456.1
COORDINATES: similar to AA sequence:RefSeq:WP_014892364.1
GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018494587.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008986 - pyruvate, water dikinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018494585.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004340 - glucokinase activity [Evidence IEA]; GO:0005536 - glucose binding [Evidence IEA]
GO:0051156 - glucose 6-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018115841.1
COORDINATES: similar to AA sequence:RefSeq:WP_004672431.1
COORDINATES: similar to AA sequence:RefSeq:WP_017996951.1
COORDINATES: similar to AA sequence:RefSeq:WP_003547968.1
COORDINATES: similar to AA sequence:RefSeq:WP_012490663.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428221.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008531281.1
COORDINATES: similar to AA sequence:RefSeq:WP_018097033.1
COORDINATES: similar to AA sequence:RefSeq:WP_004672440.1
COORDINATES: similar to AA sequence:RefSeq:WP_007627909.1
COORDINATES: similar to AA sequence:RefSeq:WP_004126148.1
COORDINATES: protein motif:HMM:NF017528.2
COORDINATES: similar to AA sequence:RefSeq:WP_010875223.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611472.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013798.2
COORDINATES: similar to AA sequence:RefSeq:WP_017996936.1
COORDINATES: similar to AA sequence:RefSeq:WP_012490674.1
COORDINATES: similar to AA sequence:RefSeq:WP_020052773.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968440.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968441.1
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018448642.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736732.1
COORDINATES: similar to AA sequence:RefSeq:WP_018071224.1
COORDINATES: similar to AA sequence:RefSeq:WP_020052779.1
GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020052780.1
COORDINATES: similar to AA sequence:RefSeq:WP_003594816.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548045.1
COORDINATES: similar to AA sequence:RefSeq:WP_018071234.1
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016736737.1
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
DHA2 family efflux MFS transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_017957687.1
COORDINATES: similar to AA sequence:RefSeq:WP_012490687.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968455.1
GO:0008678 - 2-deoxy-D-gluconate 3-dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0000272 - polysaccharide catabolic process [Evidence IEA]
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD
COORDINATES: similar to AA sequence:RefSeq:WP_011428253.1
GO:0008697 - 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity [Evidence IEA]
GO:0045490 - pectin catabolic process [Evidence IEA]
5-dehydro-4-deoxy-D-glucuronate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_015342994.1
COORDINATES: similar to AA sequence:RefSeq:WP_018486503.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957697.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003550946.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428260.1
GO:0032955 - regulation of division septum assembly [Evidence IEA]
cell division topological specificity factor MinE
COORDINATES: similar to AA sequence:RefSeq:WP_003506498.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0000918 - division septum site selection [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003548119.1
GO:0004857 - enzyme inhibitor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004674693.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548153.1
glycine cleavage T C-terminal barrel domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013844528.1
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007788007.1
heavy-metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011655076.1
COORDINATES: similar to AA sequence:RefSeq:WP_010975861.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011655074.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555224.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020049956.1
four-helix bundle copper-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017960478.1
COORDINATES: similar to AA sequence:RefSeq:WP_003539705.1
COORDINATES: similar to AA sequence:RefSeq:WP_020049953.1
GO:0009055 - electron transfer activity [Evidence IEA]
cytochrome b/b6 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007787999.1
COORDINATES: similar to AA sequence:RefSeq:WP_018069533.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563683.1
COORDINATES: similar to AA sequence:RefSeq:WP_017960473.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017960472.1
COORDINATES: similar to AA sequence:RefSeq:WP_003539697.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
plastocyanin/azurin family copper-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_020049947.1
COORDINATES: similar to AA sequence:RefSeq:WP_017988349.1
COORDINATES: similar to AA sequence:RefSeq:WP_003539562.1
COORDINATES: similar to AA sequence:RefSeq:WP_003539560.1
GO:0005509 - calcium ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011651514.1
COORDINATES: similar to AA sequence:RefSeq:WP_011651513.1
GO:0008168 - methyltransferase activity [Evidence IEA]
isoprenylcysteine carboxylmethyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007532077.1
COORDINATES: similar to AA sequence:RefSeq:WP_003539555.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
multicopper oxidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011651510.1
COORDINATES: similar to AA sequence:RefSeq:WP_018484808.1
COORDINATES: similar to AA sequence:RefSeq:WP_008531423.1
COORDINATES: similar to AA sequence:RefSeq:WP_012763633.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548168.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968491.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012763631.1
TadE/TadG family type IV pilus assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_003563671.1
COORDINATES: similar to AA sequence:RefSeq:WP_007628064.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957727.1
COORDINATES: similar to AA sequence:RefSeq:WP_012763627.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548183.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548185.1
type II secretion system F family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018246161.1
COORDINATES: similar to AA sequence:RefSeq:WP_018448696.1
GO:0051219 - phosphoprotein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003559202.1
COORDINATES: similar to AA sequence:RefSeq:WP_015002482.1
GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011487360.1
COORDINATES: similar to AA sequence:RefSeq:WP_017992657.1
COORDINATES: similar to AA sequence:RefSeq:WP_007823816.1
COORDINATES: similar to AA sequence:RefSeq:WP_010970089.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246091.1
COORDINATES: similar to AA sequence:RefSeq:WP_010023496.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_012490509.1
COORDINATES: similar to AA sequence:RefSeq:WP_012336818.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011426596.1
COORDINATES: similar to AA sequence:RefSeq:WP_007599125.1
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: similar to AA sequence:RefSeq:WP_018246175.1
COORDINATES: similar to AA sequence:RefSeq:WP_004679742.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548196.1
COORDINATES: similar to AA sequence:RefSeq:WP_012763620.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548198.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011655313.1
COORDINATES: similar to AA sequence:RefSeq:WP_011655314.1
COORDINATES: similar to AA sequence:RefSeq:WP_020397511.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957884.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957883.1
COORDINATES: similar to AA sequence:RefSeq:WP_018243083.1
COORDINATES: similar to AA sequence:RefSeq:WP_017273362.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563614.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555403.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548209.1
GO:0098024 - virus tail, fiber [Evidence IEA]
GO:0046718 - viral entry into host cell [Evidence IEA]; GO:0019062 - virion attachment to host cell [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018482235.1
COORDINATES: similar to AA sequence:RefSeq:WP_018856432.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563609.1
COORDINATES: similar to AA sequence:RefSeq:WP_009364769.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968521.1
COORDINATES: similar to AA sequence:RefSeq:WP_017991976.1
COORDINATES: similar to AA sequence:RefSeq:WP_003577103.1
COORDINATES: similar to AA sequence:RefSeq:WP_003577104.1
COORDINATES: similar to AA sequence:RefSeq:WP_004680448.1
COORDINATES: similar to AA sequence:RefSeq:WP_018317889.1
COORDINATES: similar to AA sequence:RefSeq:WP_012763606.1
COORDINATES: similar to AA sequence:RefSeq:WP_017991975.1
COORDINATES: similar to AA sequence:RefSeq:WP_012490727.1
COORDINATES: similar to AA sequence:RefSeq:WP_020052850.1
COORDINATES: similar to AA sequence:RefSeq:WP_003575145.1
BTAD domain-containing putative transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_020397508.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_012763599.1
GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017968530.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020052864.1
COORDINATES: similar to AA sequence:RefSeq:WP_018448736.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_016736777.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736778.1
COORDINATES: similar to AA sequence:RefSeq:WP_017991957.1
COORDINATES: similar to AA sequence:RefSeq:WP_020052868.1
COORDINATES: similar to AA sequence:RefSeq:WP_020052869.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548270.1
GO:0046026 - precorrin-4 C11-methyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003563572.1
GO:0046025 - precorrin-6Y C5,15-methyltransferase (decarboxylating) activity [Evidence IEA]
GO:0046140 - corrin biosynthetic process [Evidence IEA]
precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE
COORDINATES: similar to AA sequence:RefSeq:WP_016736785.1
GO:0016994 - precorrin-6A reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011655351.1
COORDINATES: similar to AA sequence:RefSeq:WP_018482262.1
GO:0030788 - precorrin-2 C20-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020052875.1
GO:0016993 - precorrin-8X methylmutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012490745.1
GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen [Evidence IEA]
GO:0019250 - aerobic cobalamin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003575180.1
GO:0043819 - precorrin-6A synthase (deacetylating) activity [Evidence IEA]