Rhizobium binae strain BLR195 plasmid p2, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
Comparative genomic analysis of Rhizobium strains in Lentils
Submitted (09-MAR-2021) Department of Plant Pathology, Zhejiang University, Yuhangtang, Hangzhou, Zhejiang 310058, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP071606.1.\nBacteria and source DNA available from UC Davis Douglas Cook Lab.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SPAdes v. 3.14\nAssembly Name :: Rhizobium_binae_BLR195\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 300.0x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/08/2023 03:08:10\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,840\nCDSs (total) :: 6,776\nGenes (coding) :: 6,500\nCDSs (with protein) :: 6,500\nGenes (RNA) :: 64\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 51\nncRNAs :: 4\nPseudo Genes (total) :: 276\nCDSs (without protein) :: 276\nPseudo Genes (ambiguous residues) :: 0 of 276\nPseudo Genes (frameshifted) :: 176 of 276\nPseudo Genes (incomplete) :: 178 of 276\nPseudo Genes (internal stop) :: 39 of 276\nPseudo Genes (multiple problems) :: 104 of 276\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_003538323.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018071683.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427859.1
COORDINATES: similar to AA sequence:RefSeq:WP_008530136.1
GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_008530137.1
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_016736945.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009585108.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008530167.1
COORDINATES: similar to AA sequence:RefSeq:WP_018446100.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011982997.1
GO:0004803 - transposase activity [Evidence IEA]
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003603269.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007604901.1
COORDINATES: similar to AA sequence:RefSeq:WP_018116988.1
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021391.2
COORDINATES: similar to AA sequence:RefSeq:WP_018114027.1
COORDINATES: similar to AA sequence:RefSeq:WP_013631025.1
COORDINATES: protein motif:HMM:NF013117.2
GO:0055085 - transmembrane transport [Evidence IEA]
mechanosensitive ion channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007531949.1
COORDINATES: similar to AA sequence:RefSeq:WP_018482982.1
COORDINATES: similar to AA sequence:RefSeq:WP_012556010.1
COORDINATES: similar to AA sequence:RefSeq:WP_020053015.1
COORDINATES: similar to AA sequence:RefSeq:WP_018071799.1
GO:0009436 - glyoxylate catabolic process [Evidence IEA]; GO:0071704 - organic substance metabolic process [Evidence IEA]
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003555614.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011654304.1
GO:0004560 - alpha-L-fucosidase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003538646.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0000976 - transcription cis-regulatory region binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]; GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_003538644.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018494001.1
COORDINATES: similar to AA sequence:RefSeq:WP_018449184.1
COORDINATES: similar to AA sequence:RefSeq:WP_018449183.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011654309.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003572412.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736889.1
COORDINATES: similar to AA sequence:RefSeq:WP_003538635.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654313.1
COORDINATES: similar to AA sequence:RefSeq:WP_017992483.1
COORDINATES: similar to AA sequence:RefSeq:WP_018483041.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011427683.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007634835.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017997672.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555452.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
efflux transporter outer membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018493990.1
GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003538619.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017958363.1
acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012555455.1
carboxyl transferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004675898.1
COORDINATES: similar to AA sequence:RefSeq:WP_007634817.1
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_017992472.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555459.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736874.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591698.1
GO:0003985 - acetyl-CoA C-acetyltransferase activity [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012092549.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020047940.1
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_018071836.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_007634806.1
GO:0006096 - glycolytic process [Evidence IEA]
dihydrolipoamide acetyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011427700.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_052642687.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012556082.1
GO:0030551 - cyclic nucleotide binding [Evidence IEA]; GO:0005216 - monoatomic ion channel activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010971862.1
GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007601084.1
COORDINATES: similar to AA sequence:RefSeq:WP_012755245.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017967809.1
cupredoxin family copper-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_010012323.1
COORDINATES: similar to AA sequence:RefSeq:WP_003575645.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428451.1
4-oxalocrotonate tautomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015242233.1
COORDINATES: similar to AA sequence:RefSeq:WP_013530651.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012755513.1
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004677572.1
COORDINATES: similar to AA sequence:RefSeq:WP_003569295.1
COORDINATES: similar to AA sequence:RefSeq:WP_018241355.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555469.1
COORDINATES: similar to AA sequence:RefSeq:WP_003569266.1
COORDINATES: similar to AA sequence:RefSeq:WP_018480345.1
COORDINATES: similar to AA sequence:RefSeq:WP_004677559.1
type II secretion system F family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003578197.1
COORDINATES: similar to AA sequence:RefSeq:WP_018447343.1
COORDINATES: similar to AA sequence:RefSeq:WP_018480341.1
GO:0016746 - acyltransferase activity [Evidence IEA]; GO:0071972 - peptidoglycan L,D-transpeptidase activity [Evidence IEA]
GO:0018104 - peptidoglycan-protein cross-linking [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017967658.1
COORDINATES: similar to AA sequence:RefSeq:WP_017967657.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428163.1
TadE/TadG family type IV pilus assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_018241344.1
COORDINATES: similar to AA sequence:RefSeq:WP_003569284.1
COORDINATES: similar to AA sequence:RefSeq:WP_004677542.1
type II and III secretion system protein family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003578181.1
COORDINATES: similar to AA sequence:RefSeq:WP_017967651.1
COORDINATES: similar to AA sequence:RefSeq:WP_018480332.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008532143.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427704.1
COORDINATES: similar to AA sequence:RefSeq:WP_003572568.1
sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB
COORDINATES: similar to AA sequence:RefSeq:WP_007635059.1
sn-glycerol-3-phosphate ABC transporter permease UgpA
COORDINATES: similar to AA sequence:RefSeq:WP_018480638.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015794 - glycerol-3-phosphate transmembrane transport [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter permease UgpE
COORDINATES: similar to AA sequence:RefSeq:WP_011649640.1
sn-glycerol-3-phosphate import ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_003562579.1
glycerophosphoryl diester phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_011427710.1
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011427711.1
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003538561.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047907.1
GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020047908.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427714.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427715.1
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003538570.1
COORDINATES: similar to AA sequence:RefSeq:WP_008532561.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006749 - glutathione metabolic process [Evidence IEA]
glutathione S-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010024168.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
aromatic ring-hydroxylating dioxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011427719.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007825575.1
COORDINATES: similar to AA sequence:RefSeq:WP_018483874.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654338.1
COORDINATES: similar to AA sequence:RefSeq:WP_003572374.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007691087.1
COORDINATES: similar to AA sequence:RefSeq:WP_011970376.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010967848.1
COORDINATES: similar to AA sequence:RefSeq:WP_010967847.1
COORDINATES: similar to AA sequence:RefSeq:WP_018068201.1
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007386868.1
COORDINATES: similar to AA sequence:RefSeq:WP_015747277.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008258709.1
COORDINATES: similar to AA sequence:RefSeq:WP_011969411.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020514087.1
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: similar to AA sequence:RefSeq:WP_020174640.1
COORDINATES: similar to AA sequence:RefSeq:WP_020174639.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
This protein belongs to a clade of uncharacterized proteins related to peroxidases such as the alkylhydroperoxidase AhpD; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012428956.1
COORDINATES: protein motif:HMM:NF024092.2
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003541111.1
COORDINATES: similar to AA sequence:RefSeq:WP_011746677.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007751015.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007413339.1
COORDINATES: similar to AA sequence:RefSeq:WP_018182348.1
COORDINATES: similar to AA sequence:RefSeq:WP_008973086.1
COORDINATES: similar to AA sequence:RefSeq:WP_013958579.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611472.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003592087.1
COORDINATES: similar to AA sequence:RefSeq:WP_015342125.1
COORDINATES: similar to AA sequence:RefSeq:WP_017992360.1
COORDINATES: similar to AA sequence:RefSeq:WP_017992361.1
COORDINATES: similar to AA sequence:RefSeq:WP_020052537.1
COORDINATES: protein motif:HMM:NF001419.0
GO:0047134 - protein-disulfide reductase (NAD(P)) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024498.2
COORDINATES: similar to AA sequence:RefSeq:WP_019965798.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007535635.1
COORDINATES: similar to AA sequence:RefSeq:WP_019140267.1
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020052533.1
COORDINATES: similar to AA sequence:RefSeq:WP_018096020.1
COORDINATES: similar to AA sequence:RefSeq:WP_003549373.1
COORDINATES: similar to AA sequence:RefSeq:WP_003549375.1
COORDINATES: similar to AA sequence:RefSeq:WP_003566929.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_018069725.1
COORDINATES: similar to AA sequence:RefSeq:WP_018069726.1
COORDINATES: similar to AA sequence:RefSeq:WP_018069727.1
ferric reductase-like transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018069728.1
COORDINATES: similar to AA sequence:RefSeq:WP_018069729.1
COORDINATES: protein motif:HMM:NF015608.2
COORDINATES: similar to AA sequence:RefSeq:WP_010188292.1
COORDINATES: similar to AA sequence:RefSeq:WP_010875223.1
COORDINATES: protein motif:HMM:NF017528.2
COORDINATES: similar to AA sequence:RefSeq:WP_004126148.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018069738.1
COORDINATES: similar to AA sequence:RefSeq:WP_012114957.1
glutathione S-transferase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000920559.1
COORDINATES: similar to AA sequence:RefSeq:WP_013521172.1
COORDINATES: similar to AA sequence:RefSeq:WP_012427026.1
COORDINATES: similar to AA sequence:RefSeq:WP_008917044.1
COORDINATES: similar to AA sequence:RefSeq:WP_018069676.1
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_003549388.1
COORDINATES: similar to AA sequence:RefSeq:WP_017992370.1
COORDINATES: similar to AA sequence:RefSeq:WP_007627151.1
COORDINATES: similar to AA sequence:RefSeq:WP_015918253.1
tripartite tricarboxylate transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_015918252.1
tripartite tricarboxylate transporter TctB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009493860.1
GO:0042597 - periplasmic space [Evidence IEA]
tripartite tricarboxylate transporter substrate binding protein
COORDINATES: protein motif:HMM:NF024772.2
GO:0140359 - ABC-type transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017454263.1
COORDINATES: similar to AA sequence:RefSeq:WP_012321062.1
SMP-30/gluconolactonase/LRE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011085063.1
COORDINATES: similar to AA sequence:RefSeq:WP_010452941.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007565222.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013368483.1
COORDINATES: similar to AA sequence:RefSeq:WP_015918248.1
COORDINATES: protein motif:HMM:NF015431.2
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003575527.1
GO:0003676 - nucleic acid binding [Evidence IEA]
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
OB-fold nucleic acid binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018449322.1
COORDINATES: similar to AA sequence:RefSeq:WP_016737104.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012759963.1
COORDINATES: similar to AA sequence:RefSeq:WP_016733055.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003568614.1
COORDINATES: similar to AA sequence:RefSeq:WP_007628989.1
COORDINATES: similar to AA sequence:RefSeq:WP_003568617.1
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006727812.1
COORDINATES: similar to AA sequence:RefSeq:WP_003568623.1
COORDINATES: similar to AA sequence:RefSeq:WP_004677182.1
COORDINATES: similar to AA sequence:RefSeq:WP_008965949.1
COORDINATES: similar to AA sequence:RefSeq:WP_012559511.1
COORDINATES: similar to AA sequence:RefSeq:WP_004677178.1
COORDINATES: similar to AA sequence:RefSeq:WP_008525409.1
COORDINATES: similar to AA sequence:RefSeq:WP_018483106.1
GO:0003867 - 4-aminobutyrate transaminase activity [Evidence IEA]
GO:0009448 - gamma-aminobutyric acid metabolic process [Evidence IEA]
4-aminobutyrate--2-oxoglutarate transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_018494542.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: protein motif:HMM:NF024297.2
COORDINATES: similar to AA sequence:RefSeq:WP_013166382.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011651618.1
COORDINATES: similar to AA sequence:RefSeq:WP_003517406.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012649951.1
type II toxin-antitoxin system VapB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_018431454.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_018516741.1
ArdC-like ssDNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007425104.1
COORDINATES: similar to AA sequence:RefSeq:WP_011970281.1
COORDINATES: similar to AA sequence:RefSeq:WP_015341881.1
COORDINATES: similar to AA sequence:RefSeq:WP_013917077.1
COORDINATES: similar to AA sequence:RefSeq:WP_007814098.1
COORDINATES: similar to AA sequence:RefSeq:WP_011397063.1
COORDINATES: similar to AA sequence:RefSeq:WP_015914898.1
COORDINATES: similar to AA sequence:RefSeq:WP_018495316.1
GO:0008725 - DNA-3-methyladenine glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011427433.1
zincin-like metallopeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014762706.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654735.1
COORDINATES: similar to AA sequence:RefSeq:WP_018070204.1
COORDINATES: similar to AA sequence:RefSeq:WP_011426157.1
COORDINATES: similar to AA sequence:RefSeq:WP_003586730.1
COORDINATES: similar to AA sequence:RefSeq:WP_028755357.1
COORDINATES: similar to AA sequence:RefSeq:WP_012222260.1
COORDINATES: similar to AA sequence:RefSeq:WP_015886660.1
COORDINATES: similar to AA sequence:RefSeq:WP_016446673.1
COORDINATES: similar to AA sequence:RefSeq:WP_011650726.1
COORDINATES: similar to AA sequence:RefSeq:WP_018245623.1
GO:0003824 - catalytic activity [Evidence IEA]
sugar phosphate isomerase/epimerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007633119.1
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018245625.1
COORDINATES: similar to AA sequence:RefSeq:WP_007633117.1
COORDINATES: similar to AA sequence:RefSeq:WP_007633116.1
COORDINATES: similar to AA sequence:RefSeq:WP_007633115.1
COORDINATES: similar to AA sequence:RefSeq:WP_020048729.1
COORDINATES: similar to AA sequence:RefSeq:WP_020048728.1
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012556039.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016646 - oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020052757.1
COORDINATES: similar to AA sequence:RefSeq:WP_018483488.1
GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011655216.1
COORDINATES: similar to AA sequence:RefSeq:WP_020052754.1
COORDINATES: similar to AA sequence:RefSeq:WP_004125441.1
COORDINATES: similar to AA sequence:RefSeq:WP_018448625.1
COORDINATES: similar to AA sequence:RefSeq:WP_013844789.1
COORDINATES: similar to AA sequence:RefSeq:WP_012763215.1
COORDINATES: similar to AA sequence:RefSeq:WP_003547969.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612098.1
COORDINATES: similar to AA sequence:RefSeq:WP_008133307.1
COORDINATES: similar to AA sequence:RefSeq:WP_015685516.1
COORDINATES: similar to AA sequence:RefSeq:WP_015685517.1
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: similar to AA sequence:RefSeq:WP_012650112.1
COORDINATES: similar to AA sequence:RefSeq:WP_006312512.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007694158.1
COORDINATES: similar to AA sequence:RefSeq:WP_006312510.1
COORDINATES: protein motif:HMM:NF012928.2
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase family protein
COORDINATES: protein motif:HMM:NF014757.2
GO:0070403 - NAD+ binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003575442.1
COORDINATES: similar to AA sequence:RefSeq:WP_003547714.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760193.1
COORDINATES: similar to AA sequence:RefSeq:WP_017991110.1
COORDINATES: similar to AA sequence:RefSeq:WP_018899638.1
invasion associated locus B family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018096595.1
COORDINATES: similar to AA sequence:RefSeq:WP_003538746.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760477.1
GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_020070492.1
COORDINATES: similar to AA sequence:RefSeq:WP_008344843.1
gluconate 2-dehydrogenase subunit 3 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008388082.1
COORDINATES: similar to AA sequence:RefSeq:WP_013590522.1
COORDINATES: similar to AA sequence:RefSeq:WP_006049883.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
thiamine pyrophosphate-requiring protein
COORDINATES: similar to AA sequence:RefSeq:WP_016554419.1
COORDINATES: similar to AA sequence:RefSeq:WP_011565675.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760561.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012760560.1
4Fe-4S dicluster domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012760559.1
NrfD/PsrC family molybdoenzyme membrane anchor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012760558.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760557.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760556.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760555.1
COORDINATES: similar to AA sequence:RefSeq:WP_014744995.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760553.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012760552.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760551.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760550.1
cytochrome C oxidase subunit IV family protein
COORDINATES: protein motif:HMM:NF013740.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:1905887 - autoinducer AI-2 transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013949457.1
COORDINATES: similar to AA sequence:RefSeq:WP_086558106.1
COORDINATES: similar to AA sequence:RefSeq:WP_011087945.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611960.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01497
AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_076612399.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003530441.1
type II toxin-antitoxin system HicB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_012556062.1
GO:0003729 - mRNA binding [Evidence IEA]
type II toxin-antitoxin system HicA family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_019565581.1
COORDINATES: similar to AA sequence:RefSeq:WP_003519380.1
COORDINATES: similar to AA sequence:RefSeq:WP_003551617.1
COORDINATES: similar to AA sequence:RefSeq:WP_018388804.1
COORDINATES: similar to AA sequence:RefSeq:WP_003113695.1
COORDINATES: similar to AA sequence:RefSeq:WP_015888177.1
COORDINATES: similar to AA sequence:RefSeq:WP_017991615.1
COORDINATES: similar to AA sequence:RefSeq:WP_018012584.1
GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]; GO:0050897 - cobalt ion binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: similar to AA sequence:RefSeq:WP_016557344.1
COORDINATES: similar to AA sequence:RefSeq:WP_018329363.1
COORDINATES: similar to AA sequence:RefSeq:WP_017265105.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555638.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428862.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
redox-sensitive transcriptional activator SoxR
COORDINATES: similar to AA sequence:RefSeq:WP_011428861.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428860.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_010968151.1
COORDINATES: similar to AA sequence:RefSeq:WP_017958375.1
COORDINATES: similar to AA sequence:RefSeq:WP_018482221.1
COORDINATES: similar to AA sequence:RefSeq:WP_017423245.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010695610.1
COORDINATES: protein motif:HMM:NF017832.2
COORDINATES: similar to AA sequence:RefSeq:WP_003576918.1
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_003592404.1
COORDINATES: similar to AA sequence:RefSeq:WP_004673403.1
COORDINATES: similar to AA sequence:RefSeq:WP_018446357.1
COORDINATES: similar to AA sequence:RefSeq:WP_016737445.1
transglycosylase SLT domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014857964.1
COORDINATES: similar to AA sequence:RefSeq:WP_007636187.1
COORDINATES: similar to AA sequence:RefSeq:WP_003576984.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427422.1
COORDINATES: similar to AA sequence:RefSeq:WP_008536871.1
COORDINATES: similar to AA sequence:RefSeq:WP_041684032.1
COORDINATES: similar to AA sequence:RefSeq:WP_018480414.1
COORDINATES: similar to AA sequence:RefSeq:WP_004677515.1
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018480416.1
COORDINATES: similar to AA sequence:RefSeq:WP_012755191.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428210.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_004677509.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736819.1
COORDINATES: similar to AA sequence:RefSeq:WP_007800779.1
COORDINATES: similar to AA sequence:RefSeq:WP_007800781.1
COORDINATES: similar to AA sequence:RefSeq:WP_004677493.1
COORDINATES: similar to AA sequence:RefSeq:WP_012559885.1
COORDINATES: similar to AA sequence:RefSeq:WP_004677489.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736809.1
COORDINATES: similar to AA sequence:RefSeq:WP_014532069.1
COORDINATES: similar to AA sequence:RefSeq:WP_020046916.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003562388.1
COORDINATES: similar to AA sequence:RefSeq:WP_004674651.1
COORDINATES: similar to AA sequence:RefSeq:WP_020046913.1
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018444720.1
COORDINATES: similar to AA sequence:RefSeq:WP_018480358.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736802.1
COORDINATES: similar to AA sequence:RefSeq:WP_004674430.1
COORDINATES: similar to AA sequence:RefSeq:WP_012759222.1
GO:0003870 - 5-aminolevulinate synthase activity [Evidence IEA]
GO:0006783 - heme biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011428795.1
COORDINATES: similar to AA sequence:RefSeq:WP_012756715.1
GO:0020037 - heme binding [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03142.1
GO:0051082 - unfolded protein binding [Evidence IEA]
c-type cytochrome biogenesis protein CcmI
COORDINATES: similar to AA sequence:RefSeq:WP_011654245.1
COORDINATES: similar to AA sequence:RefSeq:WP_017965701.1
GO:0008535 - respiratory chain complex IV assembly [Evidence IEA]
cbb3-type cytochrome oxidase assembly protein CcoS
COORDINATES: similar to AA sequence:RefSeq:WP_003568511.1
COORDINATES: similar to AA sequence:RefSeq:WP_011053472.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654242.1
GO:0003674 - molecular_function [Evidence IEA]
cytochrome c oxidase accessory protein CcoG
COORDINATES: similar to AA sequence:RefSeq:WP_003590892.1
COORDINATES: similar to AA sequence:RefSeq:WP_020048100.1
cytochrome-c oxidase, cbb3-type subunit III
COORDINATES: similar to AA sequence:RefSeq:WP_007795252.1
cbb3-type cytochrome c oxidase subunit 3
COORDINATES: similar to AA sequence:RefSeq:WP_016737483.1
cytochrome-c oxidase, cbb3-type subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_003549660.1
cytochrome-c oxidase, cbb3-type subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_003581460.1
COORDINATES: similar to AA sequence:RefSeq:WP_018494560.1
COORDINATES: similar to AA sequence:RefSeq:WP_016737107.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_076611992.1
DDE-type integrase/transposase/recombinase
COORDINATES: similar to AA sequence:RefSeq:WP_018448456.1
COORDINATES: similar to AA sequence:RefSeq:WP_018448455.1
COORDINATES: similar to AA sequence:RefSeq:WP_016556152.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246391.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246390.1
COORDINATES: similar to AA sequence:RefSeq:WP_011053474.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
oxygen-independent coproporphyrinogen III oxidase
COORDINATES: similar to AA sequence:RefSeq:WP_003581465.1
COORDINATES: similar to AA sequence:RefSeq:WP_003568473.1
COORDINATES: similar to AA sequence:RefSeq:WP_016737084.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019200 - carbohydrate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007635604.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0048029 - monosaccharide binding [Evidence IEA]
GO:0005996 - monosaccharide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007635605.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595545.1
COORDINATES: similar to AA sequence:RefSeq:WP_012560015.1
COORDINATES: similar to AA sequence:RefSeq:WP_008524000.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595542.1
COORDINATES: similar to AA sequence:RefSeq:WP_008505193.1
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018494589.1
COORDINATES: similar to AA sequence:RefSeq:WP_007823696.1
COORDINATES: similar to AA sequence:RefSeq:WP_016737076.1
COORDINATES: similar to AA sequence:RefSeq:WP_018494569.1
COORDINATES: similar to AA sequence:RefSeq:WP_008522834.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016737074.1
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003568472.1
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003579306.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004674662.1
COORDINATES: similar to AA sequence:RefSeq:WP_012558604.1
COORDINATES: similar to AA sequence:RefSeq:WP_010001356.1
COORDINATES: similar to AA sequence:RefSeq:WP_004674664.1
isochorismatase family cysteine hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_011427743.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427744.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007812009.1
GO:0018467 - formaldehyde dehydrogenase activity [Evidence IEA]
GO:0046292 - formaldehyde metabolic process [Evidence IEA]
formaldehyde dehydrogenase, glutathione-independent
COORDINATES: similar to AA sequence:RefSeq:WP_018246401.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555563.1
COORDINATES: similar to AA sequence:RefSeq:WP_016737065.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427750.1
COORDINATES: similar to AA sequence:RefSeq:WP_004674672.1
3-keto-5-aminohexanoate cleavage protein
COORDINATES: similar to AA sequence:RefSeq:WP_018496290.1
COORDINATES: similar to AA sequence:RefSeq:WP_004674674.1
COORDINATES: similar to AA sequence:RefSeq:WP_003538494.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654404.1
COORDINATES: similar to AA sequence:RefSeq:WP_007800110.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047867.1
COORDINATES: similar to AA sequence:RefSeq:WP_008529974.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047865.1
COORDINATES: similar to AA sequence:RefSeq:WP_003538486.1
COORDINATES: similar to AA sequence:RefSeq:WP_016737051.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591805.1
GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016737049.1
COORDINATES: similar to AA sequence:RefSeq:WP_003538478.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591812.1
COORDINATES: similar to AA sequence:RefSeq:WP_008529987.1
COORDINATES: similar to AA sequence:RefSeq:WP_003572268.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047854.1
COORDINATES: similar to AA sequence:RefSeq:WP_018486094.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046316 - gluconokinase activity [Evidence IEA]
GO:0046177 - D-gluconate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008529995.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007634472.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654420.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427775.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017958202.1
COORDINATES: protein motif:HMM:TIGR00254.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011654429.1
sodium:solute symporter family monocarboxylate transporter
COORDINATES: similar to AA sequence:RefSeq:WP_018517713.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555594.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654431.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591847.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_017968692.1
COORDINATES: similar to AA sequence:RefSeq:WP_004670794.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654435.1
GO:0015837 - amine transport [Evidence IEA]
The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018070680.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427789.1
homocysteine S-methyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018246862.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760657.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246864.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003572243.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427794.1
COORDINATES: similar to AA sequence:RefSeq:WP_008530030.1
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_017968703.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555604.1
GO:0047443 - 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity [Evidence IEA]
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase
COORDINATES: similar to AA sequence:RefSeq:WP_003555460.1
COORDINATES: similar to AA sequence:RefSeq:WP_003577717.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018449058.1
COORDINATES: similar to AA sequence:RefSeq:WP_007812555.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654452.1
COORDINATES: similar to AA sequence:RefSeq:WP_003577711.1
nitrogen assimilation transcriptional regulator NAC
COORDINATES: similar to AA sequence:RefSeq:WP_003572205.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003591879.1
GO:0017168 - 5-oxoprolinase (ATP-hydrolyzing) activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020047819.1
biotin-dependent carboxyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011654457.1
COORDINATES: similar to AA sequence:RefSeq:WP_003555448.1
COORDINATES: similar to AA sequence:RefSeq:WP_004670892.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011427818.1
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
COORDINATES: similar to AA sequence:RefSeq:WP_017958251.1
COORDINATES: similar to AA sequence:RefSeq:WP_018114407.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047812.1
COORDINATES: similar to AA sequence:RefSeq:WP_018486055.1
GO:0016853 - isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016736987.1
COORDINATES: similar to AA sequence:RefSeq:WP_003555441.1
COORDINATES: similar to AA sequence:RefSeq:WP_003538368.1
COORDINATES: similar to AA sequence:RefSeq:WP_003572169.1
COORDINATES: similar to AA sequence:RefSeq:WP_003538358.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760628.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO:0006793 - phosphorus metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011654469.1
aldo/keto reductase family oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_018449039.1
COORDINATES: similar to AA sequence:RefSeq:WP_007760989.1
COORDINATES: similar to AA sequence:RefSeq:WP_014857915.1
COORDINATES: similar to AA sequence:RefSeq:WP_003572153.1
COORDINATES: similar to AA sequence:RefSeq:WP_003572152.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016736976.1
COORDINATES: similar to AA sequence:RefSeq:WP_003555203.1
COORDINATES: similar to AA sequence:RefSeq:WP_004670944.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427836.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736970.1
COORDINATES: similar to AA sequence:RefSeq:WP_004670954.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015242730.1
TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016736967.1
COORDINATES: similar to AA sequence:RefSeq:WP_004670960.1
sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003538341.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654483.1
COORDINATES: similar to AA sequence:RefSeq:WP_007798827.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047783.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736962.1
COORDINATES: similar to AA sequence:RefSeq:WP_018496354.1
COORDINATES: similar to AA sequence:RefSeq:WP_018449025.1
GO:0004805 - trehalose-phosphatase activity [Evidence IEA]
GO:0005992 - trehalose biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018246921.1
COORDINATES: similar to AA sequence:RefSeq:WP_018071681.1