Rhizobium binae strain BLR195 plasmid p1, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
Comparative genomic analysis of Rhizobium strains in Lentils
Submitted (09-MAR-2021) Department of Plant Pathology, Zhejiang University, Yuhangtang, Hangzhou, Zhejiang 310058, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP071605.1.\nBacteria and source DNA available from UC Davis Douglas Cook Lab.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SPAdes v. 3.14\nAssembly Name :: Rhizobium_binae_BLR195\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 300.0x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/08/2023 03:08:10\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,840\nCDSs (total) :: 6,776\nGenes (coding) :: 6,500\nCDSs (with protein) :: 6,500\nGenes (RNA) :: 64\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 51\nncRNAs :: 4\nPseudo Genes (total) :: 276\nCDSs (without protein) :: 276\nPseudo Genes (ambiguous residues) :: 0 of 276\nPseudo Genes (frameshifted) :: 176 of 276\nPseudo Genes (incomplete) :: 178 of 276\nPseudo Genes (internal stop) :: 39 of 276\nPseudo Genes (multiple problems) :: 104 of 276\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_007767651.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018480647.1
COORDINATES: similar to AA sequence:RefSeq:WP_012489922.1
COORDINATES: similar to AA sequence:RefSeq:WP_004679084.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008532531.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012489921.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018116605.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012489919.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_018243242.1
COORDINATES: similar to AA sequence:RefSeq:WP_017991309.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018073139.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047075.1
COORDINATES: similar to AA sequence:RefSeq:WP_012556265.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018444854.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_018073143.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004673711.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017996258.1
GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0033286 - ATPase-coupled ectoine transmembrane transporter activity [Evidence IEA]; GO:0033288 - ATPase-coupled hydroxyectoine transmembrane transporter activity [Evidence IEA]
GO:0051470 - ectoine transport [Evidence IEA]; GO:0033308 - hydroxyectoine transport [Evidence IEA]
ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA
COORDINATES: similar to AA sequence:RefSeq:WP_018480609.1
GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0033286 - ATPase-coupled ectoine transmembrane transporter activity [Evidence IEA]; GO:0033288 - ATPase-coupled hydroxyectoine transmembrane transporter activity [Evidence IEA]; GO:0033294 - ectoine binding [Evidence IEA]; GO:0033295 - hydroxyectoine binding [Evidence IEA]
ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB
COORDINATES: similar to AA sequence:RefSeq:WP_018444849.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0033286 - ATPase-coupled ectoine transmembrane transporter activity [Evidence IEA]; GO:0033288 - ATPase-coupled hydroxyectoine transmembrane transporter activity [Evidence IEA]
ectoine/hydroxyectoine ABC transporter permease subunit EhuC
COORDINATES: similar to AA sequence:RefSeq:WP_012556277.1
ectoine/hydroxyectoine ABC transporter permease subunit EhuD
COORDINATES: similar to AA sequence:RefSeq:WP_003550193.1
GO:0042400 - ectoine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017996255.1
hydroxyectoine utilization dehydratase EutB
COORDINATES: similar to AA sequence:RefSeq:WP_012755556.1
COORDINATES: similar to AA sequence:RefSeq:WP_010975302.1
DoeA (degradation of ectoine A) is also called EutD (ectoine utilization D); Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012755558.1
N(2)-acetyl-L-2,4-diaminobutanoate deacetylase DoeB
COORDINATES: similar to AA sequence:RefSeq:WP_003572516.1
COORDINATES: similar to AA sequence:RefSeq:WP_003550256.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_003550259.1
GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011750918.1
COORDINATES: similar to AA sequence:RefSeq:WP_003550261.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009449902.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018493366.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018480592.1
TetR/AcrR family transcriptional regulator
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_018245715.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018444825.1
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012556295.1
COORDINATES: similar to AA sequence:RefSeq:WP_018480586.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016735721.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016735720.1
COORDINATES: similar to AA sequence:RefSeq:WP_018493374.1
COORDINATES: similar to AA sequence:RefSeq:WP_017956570.1
COORDINATES: similar to AA sequence:RefSeq:WP_012489892.1
COORDINATES: similar to AA sequence:RefSeq:WP_004673664.1
COORDINATES: similar to AA sequence:RefSeq:WP_008536871.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_041684032.1
COORDINATES: protein motif:HMM:NF019581.2
COORDINATES: similar to AA sequence:RefSeq:WP_003567832.1
COORDINATES: similar to AA sequence:RefSeq:WP_003567834.1
COORDINATES: similar to AA sequence:RefSeq:WP_003568544.1
COORDINATES: similar to AA sequence:RefSeq:WP_010914479.1
COORDINATES: similar to AA sequence:RefSeq:WP_003567839.1
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003567841.1
GO:0016787 - hydrolase activity [Evidence IEA]
isochorismatase family cysteine hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_015342281.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010914462.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015342279.1
COORDINATES: similar to AA sequence:RefSeq:WP_015342278.1
COORDINATES: similar to AA sequence:RefSeq:WP_015342277.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015342276.1
COORDINATES: similar to AA sequence:RefSeq:WP_015342275.1
COORDINATES: similar to AA sequence:RefSeq:WP_010911253.1
COORDINATES: similar to AA sequence:RefSeq:WP_015342273.1
COORDINATES: similar to AA sequence:RefSeq:WP_003551439.1
COORDINATES: protein motif:HMM:NF025079.2
COORDINATES: similar to AA sequence:RefSeq:WP_009673329.1
COORDINATES: protein motif:HMM:NF012707.2
COORDINATES: protein motif:HMM:NF005559.1
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: protein motif:HMM:NF013086.2
COORDINATES: similar to AA sequence:RefSeq:WP_020048036.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008123497.1
glycine betaine/L-proline ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011974853.1
proline/glycine betaine ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_011649278.1
COORDINATES: similar to AA sequence:RefSeq:WP_018238093.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015342287.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors [Evidence IEA]
GMC family oxidoreductase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018238095.1
COORDINATES: similar to AA sequence:RefSeq:WP_008968896.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008964182.1
GO:0003824 - catalytic activity [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017525428.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF016200.2
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015445.2
TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008493731.1
COORDINATES: similar to AA sequence:RefSeq:WP_008968084.1
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase
COORDINATES: similar to AA sequence:RefSeq:WP_018494336.1
COORDINATES: similar to AA sequence:RefSeq:WP_018494335.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007773169.1
COORDINATES: similar to AA sequence:RefSeq:WP_014331348.1
COORDINATES: similar to AA sequence:RefSeq:WP_008523093.1
4-hydroxyphenylacetate 3-hydroxylase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003577054.1
COORDINATES: similar to AA sequence:RefSeq:WP_006191520.1
COORDINATES: similar to AA sequence:RefSeq:WP_018073574.1
COORDINATES: similar to AA sequence:RefSeq:WP_008523102.1
COORDINATES: similar to AA sequence:RefSeq:WP_015888070.1
Tm-1-like ATP-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012555511.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008523106.1
COORDINATES: similar to AA sequence:RefSeq:WP_004687624.1
COORDINATES: similar to AA sequence:RefSeq:WP_008523120.1
COORDINATES: similar to AA sequence:RefSeq:WP_015342796.1
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_006150636.1
GO:0018480 - 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity [Evidence IEA]
GO:1901023 - 4-hydroxyphenylacetate catabolic process [Evidence IEA]
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_002967138.1
GO:0008687 - 3,4-dihydroxyphenylacetate 2,3-dioxygenase activity [Evidence IEA]
3,4-dihydroxyphenylacetate 2,3-dioxygenase
COORDINATES: similar to AA sequence:RefSeq:WP_018013119.1
GO:0009013 - succinate-semialdehyde dehydrogenase [NAD(P)+] activity [Evidence IEA]
GO:0009450 - gamma-aminobutyric acid catabolic process [Evidence IEA]
NADP-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_003577038.1
COORDINATES: similar to AA sequence:RefSeq:WP_003577036.1
GO:0018817 - 2-oxo-hept-3-ene-1,7-dioate hydratase activity [Evidence IEA]
2-oxo-hepta-3-ene-1,7-dioic acid hydratase
COORDINATES: similar to AA sequence:RefSeq:WP_002975851.1
GO:0018802 - 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020397626.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_005977065.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555533.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555534.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
homoprotocatechuate degradation operon regulator HpaR
COORDINATES: similar to AA sequence:RefSeq:WP_003568393.1
COORDINATES: protein motif:HMM:NF021622.2
COORDINATES: similar to AA sequence:RefSeq:WP_010008226.1
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012453748.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736028.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015917740.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736030.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016736031.1
COORDINATES: similar to AA sequence:RefSeq:WP_007791748.1
COORDINATES: similar to AA sequence:RefSeq:WP_018857889.1
COORDINATES: similar to AA sequence:RefSeq:WP_018857888.1
COORDINATES: similar to AA sequence:RefSeq:WP_007537123.1
COORDINATES: similar to AA sequence:RefSeq:WP_015342457.1
COORDINATES: similar to AA sequence:RefSeq:WP_007791730.1
COORDINATES: similar to AA sequence:RefSeq:WP_018857883.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736039.1
GO:0016020 - membrane [Evidence IEA]; GO:0042597 - periplasmic space [Evidence IEA]
GO:0015159 - polysaccharide transmembrane transporter activity [Evidence IEA]
polysaccharide biosynthesis/export family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016736041.1
COORDINATES: similar to AA sequence:RefSeq:WP_007791711.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016736043.1
COORDINATES: similar to AA sequence:RefSeq:WP_007537140.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007803047.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020051287.1
GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_012485564.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004625510.1
COORDINATES: protein motif:HMM:NF019928.2
COORDINATES: similar to AA sequence:RefSeq:WP_008876742.1
COORDINATES: similar to AA sequence:RefSeq:WP_018856018.1
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003589828.1
COORDINATES: similar to AA sequence:RefSeq:WP_018517816.1
COORDINATES: similar to AA sequence:RefSeq:WP_003542596.1
COORDINATES: similar to AA sequence:RefSeq:WP_020051456.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003582785.1
COORDINATES: similar to AA sequence:RefSeq:WP_003582783.1
COORDINATES: similar to AA sequence:RefSeq:WP_003589836.1
COORDINATES: similar to AA sequence:RefSeq:WP_007533325.1
COORDINATES: similar to AA sequence:RefSeq:WP_017995961.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047390.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047391.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047392.1
putative DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003550435.1
COORDINATES: similar to AA sequence:RefSeq:WP_003538746.1
COORDINATES: protein motif:HMM:NF040453.1
COORDINATES: similar to AA sequence:RefSeq:WP_018096595.1
COORDINATES: similar to AA sequence:RefSeq:WP_003547710.1
invasion associated locus B family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003547714.1
COORDINATES: similar to AA sequence:RefSeq:WP_043765841.1
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003547708.1
COORDINATES: similar to AA sequence:RefSeq:WP_018899363.1
COORDINATES: similar to AA sequence:RefSeq:WP_003547693.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760182.1
COORDINATES: similar to AA sequence:RefSeq:WP_003547702.1
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003550441.1
GO:0008725 - DNA-3-methyladenine glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016558157.1
lysylphosphatidylglycerol synthase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014989244.1
COORDINATES: protein motif:HMM:NF017528.2
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_014761245.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008382594.1
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003550141.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047105.1
COORDINATES: similar to AA sequence:RefSeq:WP_003562595.1
COORDINATES: similar to AA sequence:RefSeq:WP_011648807.1
COORDINATES: similar to AA sequence:RefSeq:WP_018480644.1
COORDINATES: similar to AA sequence:RefSeq:WP_018480645.1
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012555652.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003591965.1
COORDINATES: similar to AA sequence:RefSeq:WP_004680339.1
COORDINATES: similar to AA sequence:RefSeq:WP_012489700.1
GO:0016020 - membrane [Evidence IEA]; GO:1902495 - transmembrane transporter complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004680341.1
COORDINATES: similar to AA sequence:RefSeq:WP_017270164.1
COORDINATES: similar to AA sequence:RefSeq:WP_018516760.1
COORDINATES: similar to AA sequence:RefSeq:WP_015888092.1
COORDINATES: similar to AA sequence:RefSeq:WP_017967623.1
COORDINATES: similar to AA sequence:RefSeq:WP_004680348.1
COORDINATES: similar to AA sequence:RefSeq:WP_007822071.1
COORDINATES: similar to AA sequence:RefSeq:WP_004680351.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0000976 - transcription cis-regulatory region binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]; GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015343487.1
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016735430.1
COORDINATES: similar to AA sequence:RefSeq:WP_012489662.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735428.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735427.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735426.1
COORDINATES: similar to AA sequence:RefSeq:WP_004674013.1
COORDINATES: similar to AA sequence:RefSeq:WP_012489657.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011428389.1
GO:0004673 - protein histidine kinase activity [Evidence IEA]
HWE histidine kinase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012489655.1
COORDINATES: similar to AA sequence:RefSeq:WP_004674016.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555793.1
COORDINATES: similar to AA sequence:RefSeq:WP_014331408.1
COORDINATES: similar to AA sequence:RefSeq:WP_011649167.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735410.1
sialic acid TRAP transporter substrate-binding protein SiaP
COORDINATES: similar to AA sequence:RefSeq:WP_007635760.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008532689.1
GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011428376.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735402.1
COORDINATES: similar to AA sequence:RefSeq:WP_012489640.1
COORDINATES: similar to AA sequence:RefSeq:WP_003554647.1
COORDINATES: similar to AA sequence:RefSeq:WP_012489637.1
COORDINATES: similar to AA sequence:RefSeq:WP_018485768.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003575576.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_011652536.1
COORDINATES: similar to AA sequence:RefSeq:WP_004671170.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957129.1
COORDINATES: similar to AA sequence:RefSeq:WP_003551469.1
COORDINATES: similar to AA sequence:RefSeq:WP_018901392.1
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004671159.1
COORDINATES: similar to AA sequence:RefSeq:WP_012755297.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735384.1
COORDINATES: similar to AA sequence:RefSeq:WP_004671153.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735382.1
COORDINATES: similar to AA sequence:RefSeq:WP_003562285.1
COORDINATES: similar to AA sequence:RefSeq:WP_008532720.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735380.1
COORDINATES: similar to AA sequence:RefSeq:WP_012489623.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735378.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654579.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735377.1
COORDINATES: similar to AA sequence:RefSeq:WP_012489620.1
COORDINATES: similar to AA sequence:RefSeq:WP_003592040.1
YihY/virulence factor BrkB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018493481.1
GO:0019346 - transsulfuration [Evidence IEA]
cystathionine gamma-synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011649141.1
GO:0016746 - acyltransferase activity [Evidence IEA]
GO:0006635 - fatty acid beta-oxidation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012555697.1
COORDINATES: similar to AA sequence:RefSeq:WP_008532749.1
COORDINATES: similar to AA sequence:RefSeq:WP_012489611.1
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018071263.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004674075.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016735365.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735364.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012755206.1
COORDINATES: similar to AA sequence:RefSeq:WP_041684052.1
GO:0004096 - catalase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004674065.1
hydrogen peroxide-inducible genes activator
COORDINATES: similar to AA sequence:RefSeq:WP_016735359.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007635916.1
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016735357.1
COORDINATES: similar to AA sequence:RefSeq:WP_007635911.1
COORDINATES: similar to AA sequence:RefSeq:WP_007635909.1
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003571675.1
COORDINATES: similar to AA sequence:RefSeq:WP_004674049.1
COORDINATES: similar to AA sequence:RefSeq:WP_008532785.1
COORDINATES: similar to AA sequence:RefSeq:WP_018516913.1
COORDINATES: similar to AA sequence:RefSeq:WP_012755200.1
GO:0016853 - isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003562326.1
COORDINATES: similar to AA sequence:RefSeq:WP_018245496.1
COORDINATES: similar to AA sequence:RefSeq:WP_003571662.1
COORDINATES: similar to AA sequence:RefSeq:WP_003550504.1
COORDINATES: similar to AA sequence:RefSeq:WP_003576911.1
COORDINATES: similar to AA sequence:RefSeq:WP_018071277.1
COORDINATES: similar to AA sequence:RefSeq:WP_012758359.1
COORDINATES: similar to AA sequence:RefSeq:WP_018859460.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047468.1
GO:0004559 - alpha-mannosidase activity [Evidence IEA]
GO:0006013 - mannose metabolic process [Evidence IEA]
glycoside hydrolase family 38 C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018071281.1
GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003575537.1
COORDINATES: similar to AA sequence:RefSeq:WP_018448923.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555761.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428778.1
glycoside hydrolase family 3 C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016735982.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735981.1
COORDINATES: similar to AA sequence:RefSeq:WP_018516895.1
GO:0042834 - peptidoglycan binding [Evidence IEA]; GO:0015288 - porin activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017967731.1
GO:0016746 - acyltransferase activity [Evidence IEA]; GO:0071972 - peptidoglycan L,D-transpeptidase activity [Evidence IEA]
GO:0018104 - peptidoglycan-protein cross-linking [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017988738.1
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF017946.2
COORDINATES: similar to AA sequence:RefSeq:WP_003550556.1
GO:0019867 - outer membrane [Evidence IEA]
GO:0015343 - siderophore-iron transmembrane transporter activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016735975.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0008199 - ferric iron binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0033214 - siderophore-dependent iron import into cell [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016735974.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555774.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428770.1
Fe(3+)-hydroxamate ABC transporter permease FhuB
COORDINATES: similar to AA sequence:RefSeq:WP_016735971.1
iron-siderophore ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012555777.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012490158.1
COORDINATES: similar to AA sequence:RefSeq:WP_007635776.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957383.1
GO:0015297 - antiporter activity [Evidence IEA]; GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003550567.1
COORDINATES: similar to AA sequence:RefSeq:WP_003568684.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735964.1
COORDINATES: similar to AA sequence:RefSeq:WP_003550570.1
COORDINATES: similar to AA sequence:RefSeq:WP_011649087.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: similar to AA sequence:RefSeq:WP_006699924.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016735961.1
GO:0015414 - ABC-type nitrate transporter activity [Evidence IEA]
GO:0015706 - nitrate transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012555545.1
CmpA/NrtA family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011428756.1
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
HAMP domain-containing methyl-accepting chemotaxis protein
COORDINATES: similar to AA sequence:RefSeq:WP_011428755.1
COORDINATES: similar to AA sequence:RefSeq:WP_007635752.1
COORDINATES: similar to AA sequence:RefSeq:WP_004672078.1
GO:0008784 - alanine racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011428741.1
GO:0008718 - D-amino-acid dehydrogenase activity [Evidence IEA]; GO:0071949 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0055130 - D-alanine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003575608.1
COORDINATES: similar to AA sequence:RefSeq:WP_007537361.1
COORDINATES: similar to AA sequence:RefSeq:WP_003592246.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003575612.1
COORDINATES: similar to AA sequence:RefSeq:WP_010014470.1
COORDINATES: similar to AA sequence:RefSeq:WP_017996029.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428728.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611539.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555753.1
COORDINATES: protein motif:HMM:NF012791.2
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018184210.1
GO:0042834 - peptidoglycan binding [Evidence IEA]; GO:0071972 - peptidoglycan L,D-transpeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018246456.1
COORDINATES: similar to AA sequence:RefSeq:WP_014857927.1
COORDINATES: similar to AA sequence:RefSeq:WP_011650876.1
COORDINATES: similar to AA sequence:RefSeq:WP_018095949.1
GO:0046677 - response to antibiotic [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003550967.1
COORDINATES: similar to AA sequence:RefSeq:WP_003550970.1
COORDINATES: similar to AA sequence:RefSeq:WP_012490354.1
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_020047386.1
COORDINATES: similar to AA sequence:RefSeq:WP_017996022.1
COORDINATES: similar to AA sequence:RefSeq:WP_012490352.1
COORDINATES: similar to AA sequence:RefSeq:WP_007535490.1
COORDINATES: similar to AA sequence:RefSeq:WP_018446974.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047381.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012755262.1
COORDINATES: similar to AA sequence:RefSeq:WP_018071428.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246052.1
COORDINATES: similar to AA sequence:RefSeq:WP_007635614.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047367.1
GO:0050269 - coniferyl-aldehyde dehydrogenase activity [Evidence IEA]
GO:0006081 - cellular aldehyde metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003592371.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017967588.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735925.1
COORDINATES: similar to AA sequence:RefSeq:WP_017967586.1
COORDINATES: similar to AA sequence:RefSeq:WP_012755273.1
COORDINATES: similar to AA sequence:RefSeq:WP_007800569.1
COORDINATES: similar to AA sequence:RefSeq:WP_018446956.1
pyrroline-5-carboxylate reductase dimerization domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016735920.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428712.1
COORDINATES: similar to AA sequence:RefSeq:WP_018446953.1
COORDINATES: similar to AA sequence:RefSeq:WP_017966359.1
GO:0009055 - electron transfer activity [Evidence IEA]
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003551028.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
electron transfer flavoprotein subunit alpha/FixB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008532168.1
GO:0047869 - dimethylpropiothetin dethiomethylase activity [Evidence IEA]
dimethylsulfonioproprionate lyase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007826120.1
GO:0004024 - alcohol dehydrogenase activity, zinc-dependent [Evidence IEA]; GO:0051903 - S-(hydroxymethyl)glutathione dehydrogenase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0009404 - toxin metabolic process [Evidence IEA]
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_011428707.1
GO:0018738 - S-formylglutathione hydrolase activity [Evidence IEA]
GO:0046292 - formaldehyde metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017956854.1
GO:0051907 - S-(hydroxymethyl)glutathione synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003575760.1
COORDINATES: similar to AA sequence:RefSeq:WP_003572922.1
GO:0016746 - acyltransferase activity [Evidence IEA]; GO:0120225 - coenzyme A binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011649313.1
Lrp/AsnC ligand binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018480226.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591125.1
GO:0003842 - 1-pyrroline-5-carboxylate dehydrogenase activity [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0004657 - proline dehydrogenase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_012490057.1
COORDINATES: similar to AA sequence:RefSeq:WP_011649364.1
COORDINATES: similar to AA sequence:RefSeq:WP_003562931.1
COORDINATES: similar to AA sequence:RefSeq:WP_003549760.1
COORDINATES: similar to AA sequence:RefSeq:WP_018072919.1
COORDINATES: similar to AA sequence:RefSeq:WP_017269930.1
COORDINATES: similar to AA sequence:RefSeq:WP_012490052.1
COORDINATES: similar to AA sequence:RefSeq:WP_018493227.1
COORDINATES: similar to AA sequence:RefSeq:WP_017996400.1
COORDINATES: similar to AA sequence:RefSeq:WP_020465394.1
COORDINATES: similar to AA sequence:RefSeq:WP_018493230.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
four-carbon acid sugar kinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004678967.1
hydroxypyruvate isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018245982.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004678960.1
COORDINATES: similar to AA sequence:RefSeq:WP_004678957.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428649.1
GO:0018784 - (S)-2-haloacid dehalogenase activity [Evidence IEA]
GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011649380.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735884.1
COORDINATES: similar to AA sequence:RefSeq:WP_003549803.1
GO:0009027 - tartrate dehydrogenase activity [Evidence IEA]
GO:0046395 - carboxylic acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011649388.1
GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018445074.1
COORDINATES: similar to AA sequence:RefSeq:WP_010967971.1
COORDINATES: similar to AA sequence:RefSeq:WP_017264872.1
GO:0008777 - acetylornithine deacetylase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017956763.1
COORDINATES: similar to AA sequence:RefSeq:WP_012490033.1
COORDINATES: similar to AA sequence:RefSeq:WP_012490031.1
COORDINATES: similar to AA sequence:RefSeq:WP_003549825.1
COORDINATES: similar to AA sequence:RefSeq:WP_018072951.1
COORDINATES: similar to AA sequence:RefSeq:WP_012490028.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
FAD-binding and (Fe-S)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016735870.1
COORDINATES: similar to AA sequence:RefSeq:WP_018493252.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020047252.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0140662 - ATP-dependent protein folding chaperone [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018493255.1
COORDINATES: similar to AA sequence:RefSeq:WP_011649406.1
COORDINATES: similar to AA sequence:RefSeq:WP_017991464.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735865.1
COORDINATES: similar to AA sequence:RefSeq:WP_003551475.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016735864.1
COORDINATES: similar to AA sequence:RefSeq:WP_018445050.1
COORDINATES: similar to AA sequence:RefSeq:WP_017991460.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591168.1
COORDINATES: similar to AA sequence:RefSeq:WP_003572822.1
COORDINATES: similar to AA sequence:RefSeq:WP_016148983.1
COORDINATES: similar to AA sequence:RefSeq:WP_017996370.1
COORDINATES: similar to AA sequence:RefSeq:WP_003506013.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591174.1
COORDINATES: similar to AA sequence:RefSeq:WP_012490011.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012490010.1
COORDINATES: similar to AA sequence:RefSeq:WP_003549868.1
COORDINATES: similar to AA sequence:RefSeq:WP_017991452.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017996363.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018897937.1
COORDINATES: similar to AA sequence:RefSeq:WP_012490006.1
COORDINATES: similar to AA sequence:RefSeq:WP_003572796.1
COORDINATES: similar to AA sequence:RefSeq:WP_003572789.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0000976 - transcription cis-regulatory region binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011649432.1
COORDINATES: similar to AA sequence:RefSeq:WP_003549885.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591203.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047226.1
COORDINATES: similar to AA sequence:RefSeq:WP_010968886.1
COORDINATES: similar to AA sequence:RefSeq:WP_017991440.1
COORDINATES: similar to AA sequence:RefSeq:WP_017956725.1
COORDINATES: similar to AA sequence:RefSeq:WP_018245914.1
COORDINATES: similar to AA sequence:RefSeq:WP_018445027.1
COORDINATES: similar to AA sequence:RefSeq:WP_012755440.1
COORDINATES: similar to AA sequence:RefSeq:WP_004677420.1
COORDINATES: similar to AA sequence:RefSeq:WP_008532258.1
COORDINATES: similar to AA sequence:RefSeq:WP_003572770.1
COORDINATES: similar to AA sequence:RefSeq:WP_018493283.1
COORDINATES: similar to AA sequence:RefSeq:WP_012556183.1
COORDINATES: similar to AA sequence:RefSeq:WP_003575914.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047212.1
COORDINATES: similar to AA sequence:RefSeq:WP_018073004.1
COORDINATES: similar to AA sequence:RefSeq:WP_017996342.1
COORDINATES: similar to AA sequence:RefSeq:WP_017996341.1
COORDINATES: similar to AA sequence:RefSeq:WP_012755452.1
NCS1 family nucleobase:cation symporter-1
COORDINATES: similar to AA sequence:RefSeq:WP_018493292.1
COORDINATES: similar to AA sequence:RefSeq:WP_017991420.1
magnesium and cobalt transport protein CorA
COORDINATES: similar to AA sequence:RefSeq:WP_017956709.1
COORDINATES: similar to AA sequence:RefSeq:WP_018245898.1
COORDINATES: similar to AA sequence:RefSeq:WP_004676078.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004676079.1
alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_017991416.1
GO:0047471 - maltose alpha-D-glucosyltransferase activity [Evidence IEA]
GO:0005991 - trehalose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016735817.1
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004676082.1
GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003591274.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003572736.1
COORDINATES: similar to AA sequence:RefSeq:WP_004676084.1
COORDINATES: similar to AA sequence:RefSeq:WP_011649465.1
iron chelate uptake ABC transporter family permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018245891.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428574.1
COORDINATES: similar to AA sequence:RefSeq:WP_003575960.1
COORDINATES: similar to AA sequence:RefSeq:WP_018073026.1
COORDINATES: similar to AA sequence:RefSeq:WP_003575962.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047188.1
GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_008536988.1
GO:0051983 - regulation of chromosome segregation [Evidence IEA]
type II toxin-antitoxin system ParD family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_020047186.1
GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
GO:0005992 - trehalose biosynthetic process [Evidence IEA]
malto-oligosyltrehalose trehalohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_011428569.1
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017967433.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428568.1
COORDINATES: similar to AA sequence:RefSeq:WP_010975221.1
COORDINATES: similar to AA sequence:RefSeq:WP_004678167.1
COORDINATES: similar to AA sequence:RefSeq:WP_008532333.1
COORDINATES: similar to AA sequence:RefSeq:WP_003555376.1
COORDINATES: similar to AA sequence:RefSeq:WP_003549974.1
COORDINATES: similar to AA sequence:RefSeq:WP_003549975.1
COORDINATES: similar to AA sequence:RefSeq:WP_012755476.1
COORDINATES: similar to AA sequence:RefSeq:WP_003549982.1
COORDINATES: similar to AA sequence:RefSeq:WP_003549994.1
COORDINATES: similar to AA sequence:RefSeq:WP_012755479.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047175.1
COORDINATES: similar to AA sequence:RefSeq:WP_011649487.1
amino acid ABC transporter permease/ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007635198.1
COORDINATES: similar to AA sequence:RefSeq:WP_004678157.1
COORDINATES: similar to AA sequence:RefSeq:WP_003576004.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047171.1
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003576007.1
COORDINATES: similar to AA sequence:RefSeq:WP_018482467.1
COORDINATES: similar to AA sequence:RefSeq:WP_004678151.1
COORDINATES: similar to AA sequence:RefSeq:WP_018245863.1
COORDINATES: similar to AA sequence:RefSeq:WP_003550102.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428545.1
GO:0009436 - glyoxylate catabolic process [Evidence IEA]; GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012489934.1
SMP-30/gluconolactonase/LRE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004679126.1
COORDINATES: similar to AA sequence:RefSeq:WP_007635103.1
COORDINATES: similar to AA sequence:RefSeq:WP_003550107.1
COORDINATES: similar to AA sequence:RefSeq:WP_018493320.1
COORDINATES: similar to AA sequence:RefSeq:WP_003562630.1
COORDINATES: similar to AA sequence:RefSeq:WP_012556235.1
COORDINATES: similar to AA sequence:RefSeq:WP_003576053.1
COORDINATES: similar to AA sequence:RefSeq:WP_010973629.1
COORDINATES: similar to AA sequence:RefSeq:WP_008532505.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003576060.1
COORDINATES: similar to AA sequence:RefSeq:WP_008532508.1
LuxR C-terminal-related transcriptional regulator