Cutibacterium acnes HL096PA1 plasmid unnamed, complete sequence.
Bacteria; Actinomycetota; Actinomycetes; Propionibacteriales; Propionibacteriaceae; Cutibacterium.
Propionibacterium acnes strain populations in the human skin microbiome associated with acne
Submitted (01-FEB-2012) Molecular and Medical Pharmacology, University of California, Los angeles, 570 Westwood Plaza, Californica NanoSystem Institute 4339, Los Angeles, CA 90095, USA, Los Angeles, CA 90095, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP003294.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/19/2022 12:09:08\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,513\nCDSs (total) :: 2,455\nGenes (coding) :: 2,396\nCDSs (with protein) :: 2,396\nGenes (RNA) :: 58\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 45\nncRNAs :: 4\nPseudo Genes (total) :: 59\nCDSs (without protein) :: 59\nPseudo Genes (ambiguous residues) :: 0 of 59\nPseudo Genes (frameshifted) :: 26 of 59\nPseudo Genes (incomplete) :: 23 of 59\nPseudo Genes (internal stop) :: 15 of 59\nPseudo Genes (multiple problems) :: 3 of 59\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_002534191.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002520162.1
COORDINATES: similar to AA sequence:RefSeq:WP_007434368.1
COORDINATES: similar to AA sequence:RefSeq:WP_002520160.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_002532399.1
COORDINATES: similar to AA sequence:RefSeq:WP_002520158.1
COORDINATES: similar to AA sequence:RefSeq:WP_002520157.1
COORDINATES: similar to AA sequence:RefSeq:WP_002513427.1
COORDINATES: similar to AA sequence:RefSeq:WP_002526336.1
COORDINATES: similar to AA sequence:RefSeq:WP_002520148.1
COORDINATES: similar to AA sequence:RefSeq:WP_002520147.1
COORDINATES: similar to AA sequence:RefSeq:WP_002542723.1
COORDINATES: similar to AA sequence:RefSeq:WP_002518875.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002516565.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002537985.1
COORDINATES: similar to AA sequence:RefSeq:WP_002526524.1
COORDINATES: similar to AA sequence:RefSeq:WP_002526525.1
COORDINATES: similar to AA sequence:RefSeq:WP_002520141.1
COORDINATES: similar to AA sequence:RefSeq:WP_002526528.1
COORDINATES: similar to AA sequence:RefSeq:WP_002521512.1
COORDINATES: similar to AA sequence:RefSeq:WP_003527274.1
COORDINATES: similar to AA sequence:RefSeq:WP_002520137.1
COORDINATES: similar to AA sequence:RefSeq:WP_002532349.1
COORDINATES: similar to AA sequence:RefSeq:WP_002546247.1
COORDINATES: similar to AA sequence:RefSeq:WP_002520135.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002532345.1
COORDINATES: similar to AA sequence:RefSeq:WP_002550898.1
COORDINATES: similar to AA sequence:RefSeq:WP_002550899.1
COORDINATES: similar to AA sequence:RefSeq:WP_002524266.1
COORDINATES: similar to AA sequence:RefSeq:WP_002520130.1
COORDINATES: similar to AA sequence:RefSeq:WP_002518485.1
COORDINATES: similar to AA sequence:RefSeq:WP_002517038.1
COORDINATES: similar to AA sequence:RefSeq:WP_002543540.1
COORDINATES: similar to AA sequence:RefSeq:WP_002540507.1
COORDINATES: similar to AA sequence:RefSeq:WP_002523333.1
COORDINATES: similar to AA sequence:RefSeq:WP_002542651.1
COORDINATES: similar to AA sequence:RefSeq:WP_002520126.1
COORDINATES: similar to AA sequence:RefSeq:WP_003527342.1
COORDINATES: similar to AA sequence:RefSeq:WP_002522438.1
COORDINATES: similar to AA sequence:RefSeq:WP_002546271.1
type II secretion system F family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002519233.1
COORDINATES: similar to AA sequence:RefSeq:WP_002543755.1
COORDINATES: similar to AA sequence:RefSeq:WP_003527363.1
COORDINATES: similar to AA sequence:RefSeq:WP_015588742.1
TadE/TadG family type IV pilus assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_002525177.1
COORDINATES: similar to AA sequence:RefSeq:WP_002543756.1
LysM peptidoglycan-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002520574.1
COORDINATES: similar to AA sequence:RefSeq:WP_002542711.1
COORDINATES: similar to AA sequence:RefSeq:WP_002543254.1
COORDINATES: similar to AA sequence:RefSeq:WP_002519455.1
COORDINATES: similar to AA sequence:RefSeq:WP_002543484.1
COORDINATES: similar to AA sequence:RefSeq:WP_002524326.1
COORDINATES: similar to AA sequence:RefSeq:WP_002550419.1
COORDINATES: similar to AA sequence:RefSeq:WP_002523318.1
COORDINATES: similar to AA sequence:RefSeq:WP_002518861.1
COORDINATES: similar to AA sequence:RefSeq:WP_002532402.1
COORDINATES: similar to AA sequence:RefSeq:WP_002518863.1
COORDINATES: similar to AA sequence:RefSeq:WP_002518864.1
COORDINATES: similar to AA sequence:RefSeq:WP_002518866.1
COORDINATES: similar to AA sequence:RefSeq:WP_002534188.1
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: similar to AA sequence:RefSeq:WP_002542520.1
COORDINATES: similar to AA sequence:RefSeq:WP_002520285.1
COORDINATES: similar to AA sequence:RefSeq:WP_015588626.1
COORDINATES: similar to AA sequence:RefSeq:WP_002550421.1