Babesia microti strain RI chromosome IV, complete genome.
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Piroplasmida; Babesiidae; Babesia.
Genome-wide diversity and gene expression profiling of Babesia microti isolates identify polymorphic genes that mediate host-pathogen interactions
Whole genome mapping and re-organization of the nuclear and mitochondrial genomes of Babesia microti isolates
Sequencing of the smallest Apicomplexan genome from the human pathogen Babesia microti
Submitted (13-JUN-2017) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (02-FEB-2012) Genoscope - Centre National de Sequencage : BP 191 91006 EVRY cedex - FRANCE (E-mail : seqref@genoscope.cns.fr - Web : www.genoscope.cns.fr)
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to LN871599.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##
asparagine synthase (glutamine-hydrolysing)
overlaps_old_locusTagID:BBM_III04905; overlaps_old_locusTagID:BBM_III04910
overlaps_old_locusTagID:BBM_III04920; overlaps_old_locusTagID:BBM_III04925
conserved Plasmodium protein, unknown function
overlaps_old_locusTagID:BBM_III04975; overlaps_old_locusTagID:BBM_III04980
overlaps_old_locusTagID:BBM_III04995; overlaps_old_locusTagID:BBM_III05000
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
overlaps_old_locusTagID:BBM_III05005; overlaps_old_locusTagID:BBM_III05010
overlaps_old_locusTagID:BBM_III05010; overlaps_old_locusTagID:BBM_III05015
Squamous cell carcinoma antigen recognized by T-cells 3
DNA-directed RNA polymerase II subunit E
cleavage and polyadenylation specificity factor subunit 4
mitochondrial ribosomal protein S17 precursor, putative
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
overlaps_old_locusTagID:BBM_III05095; overlaps_old_locusTagID:BBM_III05100; overlaps_old_locusTagID:BBM_III05105
glycosylphosphatidylinositol anchor attachment 1 protein, putative (GPAA1)
4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis
overlaps_old_locusTagID:BBM_III05155; overlaps_old_locusTagID:BBM_III05160
Mitochondrial import inner membrane translocase subunit tim22
Uncharacterized methyltransferase C3B9.04 mitochondrial
overlaps_old_locusTagID:BBM_III05165; overlaps_old_locusTagID:BBM_III05170
pre-mRNA-splicing factor CWF18, putative
overlaps_old_locusTagID:BBM_III05245; overlaps_old_locusTagID:BBM_III05250
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
Ubiquitin carboxyl-terminal hydrolase 25
GDA1/CD39 (nucleoside phosphatase) family
Regulator of chromosome condensation (RCC1) repeat
protein transport protein SFT2, putative
overlaps_old_locusTagID:BBM_III05285; overlaps_old_locusTagID:BBM_III05290
conserved Plasmodium membrane protein, unknown function
glideosome associated protein with multiple membrane spans 1 (GAPM1)
vacuolar ATP synthase subunit g, putative
overlaps_old_locusTagID:BBM_III05325; overlaps_old_locusTagID:BBM_III05330
Vacuolar protein sorting-associated protein 13A
overlaps_old_locusTagID:BBM_III05355; overlaps_old_locusTagID:BBM_III05360
mitochondrial ribosomal protein L49 precursor, putative
ERB1, BOP1, ribosome biogenesis protein ERB1
cytochrome c oxidase subunit XV assembly protein
overlaps_old_locusTagID:BBM_III05515; overlaps_old_locusTagID:BBM_III05520
mitochondrial acidic protein MAM33, putative
UTP7, WDR46, U3 small nucleolar RNA-associated protein 7
Serine/threonine-protein phosphatase 4 regulatory subunit 3
F-type H+-transporting ATPase subunit alpha
overlaps_old_locusTagID:BBM_III05610; overlaps_old_locusTagID:BBM_III05615
Vacuolar protein sorting-associated protein 45
overlaps_old_locusTagID:BBM_III05645; overlaps_old_locusTagID:BBM_III05650
overlaps_old_locusTagID:BBM_III05685; overlaps_old_locusTagID:BBM_III05690
Uncharacterized conserved protein (DUF2042)
Probable nicotinate-nucleotide adenylyltransferase
chromosome transmission fidelity protein 1
overlaps_old_locusTagID:BBM_III05725; overlaps_old_locusTagID:BBM_III05730
overlaps_old_locusTagID:BBM_III05730; overlaps_old_locusTagID:BBM_III05735
geranylgeranyl transferase type-2 subunit beta
overlaps_old_locusTagID:BBM_III05740; overlaps_old_locusTagID:BBM_III05745
overlaps_old_locusTagID:BBM_III05745; overlaps_old_locusTagID:BBM_III05750
apicoplast conserved ycf19 protein precursor, unknown function
overlaps_old_locusTagID:BBM_III05755; overlaps_old_locusTagID:BBM_III05760
overlaps_old_locusTagID:BBM_III05765; overlaps_old_locusTagID:BBM_III05770
tRNA nucleotidyltransferase (CCA-adding enzyme)
U6 snRNA-associated Sm-like protein LSm4
overlaps_old_locusTagID:BBM_III05835; overlaps_old_locusTagID:BBM_III05840
overlaps_old_locusTagID:BBM_III05840; overlaps_old_locusTagID:BBM_III05845
overlaps_old_locusTagID:BBM_III05855; overlaps_old_locusTagID:BBM_III05860
overlaps_old_locusTagID:BBM_III05860; overlaps_old_locusTagID:BBM_III05865
overlaps_old_locusTagID:BBM_III05875; overlaps_old_locusTagID:BBM_III05880
ribonucleoside-diphosphate reductase subunit M1
2-oxoisovalerate dehydrogenase E1 component, alpha subunit
mitochondrial ribosomal protein S35 precursor, putative
overlaps_old_locusTagID:BBM_III05930; overlaps_old_locusTagID:BBM_III05935
survival motor neuron-like protein (SMN)
ubiquitin-protein ligase, putative (HRD3)
Alpha/beta hydrolase domain-containing protein 17C
Tetratricopeptide repeat protein 4 homolog
overlaps_old_locusTagID:BBM_III06030; overlaps_old_locusTagID:BBM_III06035; overlaps_old_locusTagID:BBM_III06040
transformation/transcription domain-associated protein
overlaps_old_locusTagID:BBM_III06105; overlaps_old_locusTagID:BBM_III06110
overlaps_old_locusTagID:BBM_III06125; overlaps_old_locusTagID:BBM_III06130
overlaps_old_locusTagID:BBM_III06135; overlaps_old_locusTagID:BBM_III06140
endoplasmic reticulum-resident calcium binding protein (ERC)
DNA-directed RNA polymerase III subunit C1
phosphatidylinositol N-acetylglucosaminyltransferase subunit P, putative
overlaps_old_locusTagID:BBM_III06270; overlaps_old_locusTagID:BBM_III06275
chromosome transmission fidelity protein 18
sphingomyelin synthase 2, putative (SMS2)
photosensitized INA-labeled protein 1, PhIL1, putative
cleavage and polyadenylation specificity factor subunit 5
phenylalanyl-tRNA synthetase alpha chain
double-strand break repair protein MRE11
N-acetylglucosaminylphosphatidylinositol deacetylase
RRP1, ribosomal RNA-processing protein 1
mitochondrial ribosomal protein L46 precursor, putative
overlaps_old_locusTagID:BBM_III06410; overlaps_old_locusTagID:BBM_III06415
Short-chain dehydrogenase TIC 32 chloroplastic
nascent polypeptide-associated complex subunit alpha
signal recognition particle subunit SRP68
overlaps_old_locusTagID:BBM_III06485; overlaps_old_locusTagID:BBM_III06490
ATP-binding cassette, sub-family E, member 1
apicoplast ribosomal protein S10 precursor, putative
mitochondrial ribosomal protein L21 precursor, putative
V-type H+-transporting ATPase 21kDa proteolipid subunit
SPB1, FTSJ3, AdoMet-dependent rRNA methyltransferase SPB1
transcription initiation factor TFIIH subunit H3
DDX18, HAS1, ATP-dependent RNA helicase DDX18/HAS1
Plasmodium falciparum domain of unknown function (CPW_WPC)
secreted ookinete protein, putative (PSOP6)
overlaps_old_locusTagID:BBM_III06660; overlaps_old_locusTagID:BBM_III06665
histone-lysine N-methyltransferase SETD2
Ribosome biogenesis protein WDR12 homolog
Ribosomal RNA large subunit methyltransferase K/L
ubiquinone biosynthesis methyltransferase
Putative histone-lysine N-methyltransferase 1
overlaps_old_locusTagID:BBM_III06695; overlaps_old_locusTagID:BBM_III06700
glideosome associated protein with multiple membrane spans 3 (GAPM3)
rlmN, ribosomal RNA large subunit methyltransferase N
NOP1, FBL, rRNA 2'-O-methyltransferase fibrillarin
overlaps_old_locusTagID:BBM_III06750; overlaps_old_locusTagID:BBM_III06755
overlaps_old_locusTagID:BBM_III06775; overlaps_old_locusTagID:BBM_III06780
regulator of telomere elongation helicase 1
Vacuolar protein sorting-associated protein 26
overlaps_old_locusTagID:BBM_III06825; overlaps_old_locusTagID:BBM_III06830
overlaps_old_locusTagID:BBM_III06860; overlaps_old_locusTagID:BBM_III06865
ubiquitin carboxyl-terminal hydrolase 14
overlaps_old_locusTagID:BBM_III06875; overlaps_old_locusTagID:BBM_III06880
Germinal-center associated nuclear protein
U1 small nuclear ribonucleoprotein C, putative
ribosome maturation factor RimM, putative (RimM)
translation initiation factor eIF-3 subunit 8
mitochondrial large subunit ribosomal protein, putative
geranylgeranyl transferase type-2 subunit alpha
Histone H3-like centromeric protein CSE4
overlaps_old_locusTagID:BBM_III07080; overlaps_old_locusTagID:BBM_III07085
Mitochondrial ribosome-associated GTPase 1
overlaps_old_locusTagID:BBM_III07095; overlaps_old_locusTagID:BBM_III07100
Alpha/beta hydrolase domain-containing protein 17B
MAK21, NOC1, CEBPZ, ribosome biogenesis protein MAK21
vacuolar protein-sorting-associated protein 4
peptidyl-prolyl cis-trans isomerase-like 3
guanine nucleotide-exchange factor SEC12 (SEC12)
overlaps_old_locusTagID:BBM_III07175; overlaps_old_locusTagID:BBM_III07180; overlaps_old_locusTagID:BBM_III07185
cytochrome c oxidase subunit 6B, putative (COX6B)
RRP8, ribosomal RNA-processing protein 8
transcription factor with AP2 domain(s), putative (ApiAP2)
replication factor A protein 3, putative (RPA3)
Transcription factor/nuclear export subunit protein 2
overlaps_old_locusTagID:BBM_III07375; overlaps_old_locusTagID:BBM_III07380
glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
overlaps_old_locusTagID:BBM_III07395; overlaps_old_locusTagID:BBM_III07400
overlaps_old_locusTagID:BBM_III07450; overlaps_old_locusTagID:BBM_III07455
overlaps_old_locusTagID:BBM_III07460; overlaps_old_locusTagID:BBM_III07462
sporozoite invasion-associated protein 1 (SIAP1)
overlaps_old_locusTagID:BBM_III07470; overlaps_old_locusTagID:BBM_III07475
RNA recognition motif. (a.k.a. RRM RBD or RNP domain)
Epidermal growth factor receptor substrate 15-like 1
overlaps_old_locusTagID:BBM_III07525; overlaps_old_locusTagID:BBM_III07530
N1-15 protein, maltese-cross seroactive antigen
overlaps_old_locusTagID:BBM_III07540; overlaps_old_locusTagID:BBM_III07545
overlaps_old_locusTagID:BBM_III07560; overlaps_old_locusTagID:BBM_III07565
Probable ribosome biogenesis protein RLP24
RCL1, RNA 3'-terminal phosphate cyclase-like protein
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
protein phosphatase 3, catalytic subunit
Iron-sulfur assembly protein IscA-like 2 mitochondrial
overlaps_old_locusTagID:BBM_III07630; overlaps_old_locusTagID:BBM_III07635
succinate dehydrogenase (ubiquinone) flavoprotein subunit
overlaps_old_locusTagID:BBM_III07665; overlaps_old_locusTagID:BBM_III07670
overlaps_old_locusTagID:BBM_III07685; overlaps_old_locusTagID:BBM_III07690
translation initiation factor eIF-3 subunit 6
overlaps_old_locusTagID:BBM_III07730; overlaps_old_locusTagID:BBM_III07735
overlaps_old_locusTagID:BBM_III07750; overlaps_old_locusTagID:BBM_III07755
overlaps_old_locusTagID:BBM_III07750; overlaps_old_locusTagID:BBM_III07755; overlaps_old_locusTagID:BBM_III07760
DUSP12, YVH1, dual specificity phosphatase 12
overlaps_old_locusTagID:BBM_III07775; overlaps_old_locusTagID:BBM_III07780; overlaps_old_locusTagID:BBM_III07785
overlaps_old_locusTagID:BBM_III07790; overlaps_old_locusTagID:BBM_III07795; overlaps_old_locusTagID:BBM_III07800
BmGPI19, Sexual stage antigen, Pfam s48/45
Eukaryotic translation initiation factor eIF2A
overlaps_old_locusTagID:BBM_III07825; overlaps_old_locusTagID:BBM_III07830
overlaps_old_locusTagID:BBM_III07835; overlaps_old_locusTagID:BBM_III07840
overlaps_old_locusTagID:BBM_III07860; overlaps_old_locusTagID:BBM_III07865
overlaps_old_locusTagID:BBM_III07930; overlaps_old_locusTagID:BBM_III07935
CCAAT-box DNA binding protein subunit B-CBFD_NFYB_HMF
ubiquitin activating enzyme (E1) subunit Aos1, putative (AOS1)
mitochondrial ribosomal protein S14 precursor, putative
overlaps_old_locusTagID:BBM_III08025; overlaps_old_locusTagID:BBM_III08030
peptide chain release factor eRF subunit 1
overlaps_old_locusTagID:BBM_III08080; overlaps_old_locusTagID:BBM_III08085
overlaps_old_locusTagID:BBM_III08095; overlaps_old_locusTagID:BBM_III08100
overlaps_old_locusTagID:BBM_III08105; overlaps_old_locusTagID:BBM_III08110
origin recognition complex subunit 5 (ORC5)
overlaps_old_locusTagID:BBM_III08115; overlaps_old_locusTagID:BBM_III08120
DNA-directed RNA Polymerase III subunit C5
UTP18, U3 small nucleolar RNA-associated protein 18
overlaps_old_locusTagID:BBM_III08185; overlaps_old_locusTagID:BBM_III08195
overlaps_old_locusTagID:BBM_III08205; overlaps_old_locusTagID:BBM_III08210
overlaps_old_locusTagID:BBM_III08225; overlaps_old_locusTagID:BBM_III08230
cysteine-rich PDZ-binding protein, putative (CRIPT)
overlaps_old_locusTagID:BBM_III08265; overlaps_old_locusTagID:BBM_III08270
guanine nucleotide-binding protein subunit beta-2-like 1 protein
overlaps_old_locusTagID:BBM_III08290; overlaps_old_locusTagID:BBM_III08295
phosducin-like protein, putative (PhLP3)
overlaps_old_locusTagID:BBM_III08350; overlaps_old_locusTagID:BBM_III08355
overlaps_old_locusTagID:BBM_III08365; overlaps_old_locusTagID:BBM_III08370
nitric oxide synthase-interacting protein
translation initiation factor eIF-3 subunit 9
overlaps_old_locusTagID:BBM_III08430; overlaps_old_locusTagID:BBM_III08435; overlaps_old_locusTagID:BBM_III08440
overlaps_old_locusTagID:BBM_III08440; overlaps_old_locusTagID:BBM_III08445; overlaps_old_locusTagID:BBM_III08450
p21-activated protein kinase-interacting protein 1-like
PfCRT orthologue, Chloroquine resistant transport gene
Archease protein family (MTH1598/TM1083)
apicoplast ribosomal protein L15 precursor, putative
overlaps_old_locusTagID:BBM_III08555; overlaps_old_locusTagID:BBM_III08560
RNA pseudouridylate synthase domain-containing protein 1
overlaps_old_locusTagID:BBM_III08580; overlaps_old_locusTagID:BBM_III08585
Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical]
U6 snRNA-associated Sm-like protein LSm2
overlaps_old_locusTagID:BBM_III08625; overlaps_old_locusTagID:BBM_III08630
thrombospondin-related anonymous protein
overlaps_old_locusTagID:BBM_III08650; overlaps_old_locusTagID:BBM_III08655
V-type H+-transporting ATPase 16kDa proteolipid subunit
secreted ookinete protein, putative (PSOP13)
overlaps_old_locusTagID:BBM_III08705; overlaps_old_locusTagID:BBM_III08710
DNA-directed RNA Polymerase II subunit L
overlaps_old_locusTagID:BBM_III08785; overlaps_old_locusTagID:BBM_III08790
overlaps_old_locusTagID:BBM_III08815; overlaps_old_locusTagID:BBM_III08820
apicoplast import protein Tic20, putative (TIC20)
F-type H+-transporting ATPase subunit delta
overlaps_old_locusTagID:BBM_III08835; overlaps_old_locusTagID:BBM_III08840
protein farnesyltransferase subunit beta
overlaps_old_locusTagID:BBM_III08900; overlaps_old_locusTagID:BBM_III08905
overlaps_old_locusTagID:BBM_III08920; overlaps_old_locusTagID:BBM_III08925
structure-specific recognition protein 1
overlaps_old_locusTagID:BBM_III08950; overlaps_old_locusTagID:BBM_III08955
overlaps_old_locusTagID:BBM_III08970; overlaps_old_locusTagID:BBM_III08975
overlaps_old_locusTagID:BBM_III08985; overlaps_old_locusTagID:BBM_III08990
vacuolar membrane protein-related, putative
DNA-directed RNA polymerase, mitochondrial
overlaps_old_locusTagID:BBM_III09005; overlaps_old_locusTagID:BBM_III09015
overlaps_old_locusTagID:BBM_III09025; overlaps_old_locusTagID:BBM_III09030
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
overlaps_old_locusTagID:BBM_III09055; overlaps_old_locusTagID:BBM_III09060
transcription initiation factor TFIIH subunit H4
mediator of RNA polymerase II transcription subunit 7, putative (MED7)
overlaps_old_locusTagID:BBM_III09085; overlaps_old_locusTagID:BBM_III09090
protein transport protein SEC61 subunit beta (Sec61-beta)
overlaps_old_locusTagID:BBM_III09100; overlaps_old_locusTagID:BBM_III09105
Ferredoxin--NADP reductase chloroplastic
POP4, RPP29, ribonuclease P protein subunit POP4
DNA methyltransferase 1-associated protein 1
overlaps_old_locusTagID:BBM_III09260; overlaps_old_locusTagID:BBM_III09270
NifU-like scaffold protein, putative (NifU)
overlaps_old_locusTagID:BBM_III09280; overlaps_old_locusTagID:BBM_III09285
overlaps_old_locusTagID:BBM_III09300; overlaps_old_locusTagID:BBM_III09305
diphthamide biosynthesis enzyme Dph1/Dph2 domain
ubiquinol-cytochrome c reductase iron-sulfur subunit
overlaps_old_locusTagID:BBM_III09330; overlaps_old_locusTagID:BBM_III09335
G patch domain-containing protein 1 homolog
peptidyl-prolyl cis-trans isomerase SDCCAG10
overlaps_old_locusTagID:BBM_III09390; overlaps_old_locusTagID:BBM_III09395
overlaps_old_locusTagID:BBM_III09395; overlaps_old_locusTagID:BBM_III09400
mitochondrial carrier protein, MC family
Thioredoxin domain-containing protein 9 homolog
overlaps_old_locusTagID:BBM_III09500; overlaps_old_locusTagID:BBM_III09505
overlaps_old_locusTagID:BBM_III09515; overlaps_old_locusTagID:BBM_III09520
Sorting and assembly machinery component 50 homolog A
signal peptidase, endoplasmic reticulum-type
overlaps_old_locusTagID:BBM_III09587; overlaps_old_locusTagID:BBM_III09590
overlaps_old_locusTagID:BBM_III09610; overlaps_old_locusTagID:BBM_III09615
overlaps_old_locusTagID:BBM_III09630; overlaps_old_locusTagID:BBM_III09635
POP1, ribonuclease P/MRP protein subunit POP1
translation initiation factor eIF-3 subunit 7
mediator of replication checkpoint protein 1
overlaps_old_locusTagID:BBM_III09670; overlaps_old_locusTagID:BBM_III09675
nucleoside diphosphate hydrolase, putative
solute carrier family 39 (zinc transporter)
overlaps_old_locusTagID:BBM_III09730; overlaps_old_locusTagID:BBM_III09735
Putative transcription elongation factor SPT5 homolog 1
mitochondrial import receptor subunit TOM40
overlaps_old_locusTagID:BBM_III09775; overlaps_old_locusTagID:BBM_III09780
Multifunctional tryptophan biosynthesis protein
overlaps_old_locusTagID:BBM_III09835; overlaps_old_locusTagID:BBM_III09840
protein phosphatase 2 (formerly 2A), regulatory subunit B'
overlaps_old_locusTagID:BBM_III09850; overlaps_old_locusTagID:BBM_III09855
overlaps_old_locusTagID:BBM_III09855; overlaps_old_locusTagID:BBM_III09860
CDGSH iron-sulfur domain-containing protein, putative
overlaps_old_locusTagID:BBM_III09895; overlaps_old_locusTagID:BBM_III09900; overlaps_old_locusTagID:BBM_III09905
stripes inner membrane complex protein, putative (SIP)