Babesia microti strain RI chromosome III, complete genome.
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Piroplasmida; Babesiidae; Babesia.
Genome-wide diversity and gene expression profiling of Babesia microti isolates identify polymorphic genes that mediate host-pathogen interactions
Whole genome mapping and re-organization of the nuclear and mitochondrial genomes of Babesia microti isolates
Sequencing of the smallest Apicomplexan genome from the human pathogen Babesia microti
Submitted (13-JUN-2017) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (02-FEB-2012) Genoscope - Centre National de Sequencage : BP 191 91006 EVRY cedex - FRANCE (E-mail : seqref@genoscope.cns.fr - Web : www.genoscope.cns.fr)
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to LN871598.\nOn Jun 13, 2017 this sequence version replaced gi:829088320.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##
overlaps_old_locusTagID:BBM_III00010; overlaps_old_locusTagID:BBM_III00015
cytochrome c oxidase subunit 2, putative
conserved Plasmodium membrane protein, unknown function
DNA-directed RNA polymerase II subunit J
inner membrane complex protein 1f, putative (IMC1f)
conserved Plasmodium protein, unknown function
overlaps_old_locusTagID:BBM_III00095; overlaps_old_locusTagID:BBM_III00100
overlaps_old_locusTagID:BBM_III00130; overlaps_old_locusTagID:BBM_III00135
Ganglioside-induced differentiation-associated protein 2
Probable phospholipid-transporting ATPase DRS2
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4
overlaps_old_locusTagID:BBM_III00180; overlaps_old_locusTagID:BBM_III00185
overlaps_old_locusTagID:BBM_III00190; overlaps_old_locusTagID:BBM_III00195
Vacuolar protein sorting-associated protein 11 homolog
Set1/Ash2 histone methyltransferase complex subunit ASH2
DDX47, RRP3, ATP-dependent RNA helicase DDX47/RRP3
protein phosphatase 2 (formerly 2A), catalytic subunit
overlaps_old_locusTagID:BBM_III00280; overlaps_old_locusTagID:BBM_III00285
overlaps_old_locusTagID:BBM_III00290; overlaps_old_locusTagID:BBM_III00295
ATP synthase mitochondrial F1 complex assembly factor 1
overlaps_old_locusTagID:BBM_III00335; overlaps_old_locusTagID:BBM_III00340; overlaps_old_locusTagID:BBM_III00345
Transcription initiation factor TFIID subunit 5
overlaps_old_locusTagID:BBM_III00365; overlaps_old_locusTagID:BBM_III00370
Zinc finger A20 and AN1 domain-containing stress-associated protein 7
pantetheine-phosphate adenylyltransferase
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation
Trafficking protein particle complex subunit 5
UTP24, FCF1, U3 small nucleolar RNA-associated protein 24
Receptor homology region transmembrane domain-and RING domain-containing protein 5
overlaps_old_locusTagID:BBM_III00455; overlaps_old_locusTagID:BBM_III00460
Leu/Phe-tRNA protein transferase, putative
myosin light chain 1,myosin A tail domain interacting protein (MTIP)
overlaps_old_locusTagID:BBM_III00580; overlaps_old_locusTagID:BBM_III00585; overlaps_old_locusTagID:BBM_III00590
overlaps_old_locusTagID:BBM_III00630; overlaps_old_locusTagID:BBM_III00635
U6 snRNA-associated Sm-like protein LSm6
Signal recognition particle receptor subunit beta
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Probable dual-specificity RNA methyltransferase RlmN 2
ATP-binding cassette, sub-family F, member 3
tRNA synthetase class II core domain (G H P S and T)
U6 snRNA-associated Sm-like protein LSm1, putative (LSM1)
overlaps_old_locusTagID:BBM_III00705; overlaps_old_locusTagID:BBM_III00710
RRS1, regulator of ribosome biosynthesis
Mitochondrial import inner membrane translocase subunit TIM44
overlaps_old_locusTagID:BBM_III00750; overlaps_old_locusTagID:BBM_III00755
MMS19 nucleotide excision repair protein homolog
BmGPI11, Conserved protein, unknown function
2-oxoisovalerate dehydrogenase E1 component, beta subunit
overlaps_old_locusTagID:BBM_III00775; overlaps_old_locusTagID:BBM_III00780
BmGPI12, BMN1 family, BMN1-9, BmSA1 orthologue
Cofilin/actin-depolymerizing factor homolog 1
Mitochondrial import inner membrane translocase subunit Tim10
overlaps_old_locusTagID:BBM_III00865; overlaps_old_locusTagID:BBM_III00870
overlaps_old_locusTagID:BBM_III00900; overlaps_old_locusTagID:BBM_III00905
Histidine phosphatase superfamily (branch 2)
overlaps_old_locusTagID:BBM_III00915; overlaps_old_locusTagID:BBM_III00920
Probable ATP-dependent RNA helicase DHR1
overlaps_old_locusTagID:BBM_III00950; overlaps_old_locusTagID:BBM_III00955
Eukaryotic translation initiation factor eIF2A
Phosphoenolpyruvate/phosphate translocator 2 chloroplastic
peripheral plastid protein 1, putative (PPP1)
minichromosome maintenance protein 5 (cell division control protein)
mitochondrial ribosomal protein S18 precursor, putative
DNA-directed RNA polymerase III subunit C34
overlaps_old_locusTagID:BBM_III01150; overlaps_old_locusTagID:BBM_III01155
overlaps_old_locusTagID:BBM_III01160; overlaps_old_locusTagID:BBM_III01165
LEM3 (ligand-effect modulator 3) family / CDC50 family
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
tRNA (guanine(10)-N2)-methyltransferase homolog
overlaps_old_locusTagID:BBM_III01215; overlaps_old_locusTagID:BBM_III01220
transcription initiation factor TFIID TATA-box-binding protein
overlaps_old_locusTagID:BBM_III01275; overlaps_old_locusTagID:BBM_III01280
CCR4-NOT transcription complex subunit 1
overlaps_old_locusTagID:BBM_III01305; overlaps_old_locusTagID:BBM_III01310; overlaps_old_locusTagID:BBM_III01315
TVP38/TMEM64 family membrane protein slr0305
DNA topoisomerase VI, b subunit, putative
MFS transporter, SP family, sugar:H+ symporter
transcription initiation factor TFIIE alpha subunit
overlaps_old_locusTagID:BBM_III01355; overlaps_old_locusTagID:BBM_III01360
overlaps_old_locusTagID:BBM_III01385; overlaps_old_locusTagID:BBM_III01390
translation initiation factor eIF-3 subunit 2
transcription initiation factor IIA subunit 1, putative
overlaps_old_locusTagID:BBM_III01420; overlaps_old_locusTagID:BBM_III01425
Cytochrome c oxidase assembly protein COX19
ATPase family associated with various cellular activities (AAA)
Tat binding protein 1(TBP-1)-interacting protein, putative
pre-mRNA 3' end processing protein WDR33
overlaps_old_locusTagID:BBM_III01550; overlaps_old_locusTagID:BBM_III01555
Probable serine/threonine-protein kinase fhkD
ADP-ribosylation factor GTPase-activating protein 2/3
peptidyl-prolyl isomerase H (cyclophilin H)
transcription factor with AP2 domain(s) (ApiAP2)
mitochondrial ribosomal protein L23 precursor, putative
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
overlaps_old_locusTagID:BBM_III01635; overlaps_old_locusTagID:BBM_III01640
ubiquitin fusion degradation protein 1 (UFD1)
overlaps_old_locusTagID:BBM_III01655; overlaps_old_locusTagID:BBM_III01660
Probable protein tyrosine phosphatase type IVA A
overlaps_old_locusTagID:BBM_III01665; overlaps_old_locusTagID:BBM_III01670; overlaps_old_locusTagID:BBM_III01675
BmGPI14, Conserved protein (piroplasmida)
inositol-1,4,5-trisphosphate 5-phosphatase
overlaps_old_locusTagID:BBM_III01740; overlaps_old_locusTagID:BBM_III01745
overlaps_old_locusTagID:BBM_III01770; overlaps_old_locusTagID:BBM_III01775
UTP13, TBL3, U3 small nucleolar RNA-associated protein 13
overlaps_old_locusTagID:BBM_III01810; overlaps_old_locusTagID:BBM_III01815
(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
CDGSH iron-sulfur domain-containing protein 3 mitochondrial
Vacuolar sorting protein 9 (VPS9) domain
overlaps_old_locusTagID:BBM_III01835; overlaps_old_locusTagID:BBM_III01840
RRB1, GRWD1, ribosome assembly protein RRB1
phosphoinositide-binding protein, putative
overlaps_old_locusTagID:BBM_III01850; overlaps_old_locusTagID:BBM_III01855
Zinc finger CCCH domain-containing protein 11
translation initiation factor eIF-2 beta subunit
overlaps_old_locusTagID:BBM_III01875; overlaps_old_locusTagID:BBM_III01880
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
overlaps_old_locusTagID:BBM_III01890; overlaps_old_locusTagID:BBM_III01895
PUF6, pumilio homology domain family member 6
overlaps_old_locusTagID:BBM_III01925; overlaps_old_locusTagID:BBM_III01930
Vacuolar protein 14 C-terminal Fig4p binding
overlaps_old_locusTagID:BBM_III01940; overlaps_old_locusTagID:BBM_III01945
Phosphorylated CTD interacting factor 1 WW domain
overlaps_old_locusTagID:BBM_III01965; overlaps_old_locusTagID:BBM_III01970
TAF9, FAP7, transcription initiation factor TFIID subunit 9 / adenylate kinase
DNA-directed RNA polymerase II subunit I
Mitochondrial FAD-linked sulfhydryl oxidase ERV1
overlaps_old_locusTagID:BBM_III02005; overlaps_old_locusTagID:BBM_III02010
phosphatidate cytidylyltransferase, putative
overlaps_old_locusTagID:BBM_III02030; overlaps_old_locusTagID:BBM_III02035
overlaps_old_locusTagID:BBM_III02035; overlaps_old_locusTagID:BBM_III02040
1-phosphatidylinositol-4-phosphate 5-kinase
overlaps_old_locusTagID:BBM_III02070; overlaps_old_locusTagID:BBM_III02075
overlaps_old_locusTagID:BBM_III02090; overlaps_old_locusTagID:BBM_III02095; overlaps_old_locusTagID:BBM_III02100
Ubiquinone biosynthesis O-methyltransferase
Probable 39S ribosomal protein L24 mitochondrial
cyclin dependent kinase binding protein, putative
PHD finger-like domain-containing protein 5A
overlaps_old_locusTagID:BBM_III02175; overlaps_old_locusTagID:BBM_III02180
overlaps_old_locusTagID:BBM_III02190; overlaps_old_locusTagID:BBM_III02195
Probable E3 ubiquitin-protein ligase HERC1
overlaps_old_locusTagID:BBM_III02215; overlaps_old_locusTagID:BBM_III02220
ribonucleoside-diphosphate reductase subunit M2
cop-coated vesicle membrane protein p24 precursor, putative
protein phosphatase 1, catalytic subunit
overlaps_old_locusTagID:BBM_III02265; overlaps_old_locusTagID:BBM_III02270
Proteasomal ubiquitin receptor ADRM1 homolog
overlaps_old_locusTagID:BBM_III02280; overlaps_old_locusTagID:BBM_III02285
overlaps_old_locusTagID:BBM_III02290; overlaps_old_locusTagID:BBM0_02292; overlaps_old_locusTagID:BBM_III02295
overlaps_old_locusTagID:BBM_III02315; overlaps_old_locusTagID:BBM_III02320
overlaps_old_locusTagID:BBM_III02320; overlaps_old_locusTagID:BBM_III02325
DNA-directed RNA polymerase II subunit RPB4
DNA-directed RNA polymerase II subunit D
Small nuclear ribonucleoprotein-associated protein B
overlaps_old_locusTagID:BBM_III02365; overlaps_old_locusTagID:BBM_III02370
overlaps_old_locusTagID:BBM_III02370; overlaps_old_locusTagID:BBM_III02375
overlaps_old_locusTagID:BBM_III02400; overlaps_old_locusTagID:BBM_III02405
overlaps_old_locusTagID:BBM_III02465; overlaps_old_locusTagID:BBM_III02470
mitochondrial ribosomal protein L28 precursor, putative
secreted ookinete protein, putative (PSOP17)
overlaps_old_locusTagID:BBM_III02620; overlaps_old_locusTagID:BBM_III02625
overlaps_old_locusTagID:BBM_III02690; overlaps_old_locusTagID:BBM_III02695
Eukaryotic translation initiation factor 4G
BmGPI15, Sexual stage antigen, Pfam s48/45
mitochondrial ATP synthase F1, epsilon subunit, putative
overlaps_old_locusTagID:BBM_III02745; overlaps_old_locusTagID:BBM_III02750
drug/metabolite exporter, drug/metabolite transporter
overlaps_old_locusTagID:BBM_III02785; overlaps_old_locusTagID:BBM_III02790
overlaps_old_locusTagID:BBM_III02795; overlaps_old_locusTagID:BBM_III02800
overlaps_old_locusTagID:BBM_III02800; overlaps_old_locusTagID:BBM_III02805
overlaps_old_locusTagID:BBM_III02825; overlaps_old_locusTagID:BBM_III02830
overlaps_old_locusTagID:BBM_III02855; overlaps_old_locusTagID:BBM_III02860; overlaps_old_locusTagID:BBM_III02865
CCR4-NOT transcription complex subunit 7/8
overlaps_old_locusTagID:BBM_III02915; overlaps_old_locusTagID:BBM_III02920
male gamete fusion factor HAP2, putative (HAP2)
overlaps_old_locusTagID:BBM_III02930; overlaps_old_locusTagID:BBM_III02935
overlaps_old_locusTagID:BBM_III02965; overlaps_old_locusTagID:BBM_III02970
Eukaryotic translation initiation factor 3 subunit K
overlaps_old_locusTagID:BBM_III02970; overlaps_old_locusTagID:BBM_III02975; overlaps_old_locusTagID:BBM_III02980
Eukaryotic translation initiation factor 3 subunit H
overlaps_old_locusTagID:BBM_III03005; overlaps_old_locusTagID:BBM_III03010
Non-canonical poly(A) RNA polymerase PAPD7
overlaps_old_locusTagID:BBM_III03030; overlaps_old_locusTagID:BBM_III03035
trafficking protein particle complex subunit 6A, putative
overlaps_old_locusTagID:BBM_III03075; overlaps_old_locusTagID:BBM_III03080
overlaps_old_locusTagID:BBM_III03090; overlaps_old_locusTagID:BBM_III03095
U3 small nucleolar RNA-associated protein 4
GABA(A) receptor-associated protein (autophagy-related protein 8)
DNA-directed RNA polymerase III subunit C25
UTP25, DEF, U3 small nucleolar RNA-associated protein 25
DNAJA5, DnaJ homolog subfamily A member 5
RNA recognition motif. (a.k.a. RRM RBD or RNP domain)
overlaps_old_locusTagID:BBM_III03305; overlaps_old_locusTagID:BBM_III03310
mitochondrial ribosomal protein S5 precursor, putative
PHD and RING finger domain-containing protein 1
histone-lysine N-methyltransferase, H3 lysine-4 specific (SET10)
overlaps_old_locusTagID:BBM_III03370; overlaps_old_locusTagID:BBM_III03375
PAB-dependent poly(A)-specific ribonuclease subunit 2
diphthamide biosynthesis enzyme Dph1/Dph2 domain
Plasmodium falciparum domain of unknown function (CPW_WPC)
BmGPI17, Conserved protein, unknown function
NOP10, NOLA3, H/ACA ribonucleoprotein complex subunit 3
DNA mismatch repair protein MSH1 mitochondrial
trafficking protein particle complex subunit 1, putative (BET5)
Regulator of chromosome condensation (RCC1) repeat
ubiquitin-conjugating enzyme (huntingtin interacting protein 2)
mitochondrial import inner membrane translocase subunit TIM23, putative (TIM23)
overlaps_old_locusTagID:BBM_III03555; overlaps_old_locusTagID:BBM_III03560
UTP3, SAS10, U3 small nucleolar RNA-associated protein 3
Acyl-CoA-binding domain-containing protein 6
Putative MYST-like histone acetyltransferase 1
THO complex subunit 1 transcription elongation factor
Non-canonical poly(A) RNA polymerase PAPD5
overlaps_old_locusTagID:BBM_III03660; overlaps_old_locusTagID:BBM_III03665
glideosome associated protein with multiple membrane spans 2 (GAPM2)
EIF4A3, FAL1, ATP-dependent RNA helicase
Phosphatidylinositol-specific phospholipase C X domain
UTP14, U3 small nucleolar RNA-associated protein 14
Vacuolar protein sorting-associated protein 35B
actin-like protein homolog, ALP1 homolog
Mitochondrial import inner membrane translocase subunit Tim9
DNA repair and recombination protein RAD54 and RAD54-like protein
U6 snRNA-associated Sm-like protein LSm5
DNA-directed RNA polymerase I subunit A1
ADP-ribosylation factor GTPase-activating protein 1
peptidylprolyl isomerase domain and WD repeat-containing protein 1
overlaps_old_locusTagID:BBM_III03905; overlaps_old_locusTagID:BBM_III03910
DDX31, DBP7, ATP-dependent RNA helicase DDX31/DBP7
nucleoporin NUP116/NSP116, putative (NUP116)
overlaps_old_locusTagID:BBM_III03945; overlaps_old_locusTagID:BBM_III03950
signal recognition particle subunit SRP9 (SRP9)
NMD3, nonsense-mediated mRNA decay protein 3
BRX1, BRIX1, ribosome biogenesis protein BRX1
rlmE, rrmJ, ftsJ, ribosomal RNA large subunit methyltransferase E
overlaps_old_locusTagID:BBM_III03970; overlaps_old_locusTagID:BBM_III03975
LisH domain-containing protein C29A3.03c
overlaps_old_locusTagID:BBM_III04025; overlaps_old_locusTagID:BBM_III04030
overlaps_old_locusTagID:BBM_III04035; overlaps_old_locusTagID:BBM_III04040
signal recognition particle subunit SRP54
overlaps_old_locusTagID:BBM_III04040; overlaps_old_locusTagID:BBM_III04045
translation initiation factor eIF-2 alpha subunit
tetratricopeptide repeat family protein, putative
overlaps_old_locusTagID:BBM_III04050; overlaps_old_locusTagID:BBM_III04055; overlaps_old_locusTagID:BBM_III04060
NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1
ubiquinol-cytochrome c reductase subunit 7
overlaps_old_locusTagID:BBM_III04120; overlaps_old_locusTagID:BBM_III04125
chromodomain-helicase-DNA-binding protein 1
overlaps_old_locusTagID:BBM_III04155; overlaps_old_locusTagID:BBM_III04160
overlaps_old_locusTagID:BBM_III04160; overlaps_old_locusTagID:BBM_III04165
overlaps_old_locusTagID:BBM_III04180; overlaps_old_locusTagID:BBM_III04185
overlaps_old_locusTagID:BBM_III04185; overlaps_old_locusTagID:BBM_III04190
overlaps_old_locusTagID:BBM_III04220; overlaps_old_locusTagID:BBM_III04225
overlaps_old_locusTagID:BBM_III04240; overlaps_old_locusTagID:BBM_III04245
Ubiquitin fusion degradation protein UFD1
overlaps_old_locusTagID:BBM_III04300; overlaps_old_locusTagID:BBM_III04305
5-3 exonuclease N-terminal resolvase-like domain
Uncharacterised protein family (UPF0041)
overlaps_old_locusTagID:BBM_III04360; overlaps_old_locusTagID:BBM_III04365
U1 small nuclear ribonucleoprotein 70 kDa
U1 small nuclear ribonucleoprotein 70kDa
overlaps_old_locusTagID:BBM_III04385; overlaps_old_locusTagID:BBM_III04390; overlaps_old_locusTagID:BBM_III04395
overlaps_old_locusTagID:BBM_III04390; overlaps_old_locusTagID:BBM_III04395
overlaps_old_locusTagID:BBM_III04440; overlaps_old_locusTagID:BBM_III04445
Serine/arginine repetitive matrix protein 2
overlaps_old_locusTagID:BBM_III04470; overlaps_old_locusTagID:BBM_III04475
overlaps_old_locusTagID:BBM_III04475; overlaps_old_locusTagID:BBM_III04480
Putative tRNA pseudouridine synthase Pus10
IMP4, U3 small nucleolar ribonucleoprotein protein IMP4
overlaps_old_locusTagID:BBM_III04535; overlaps_old_locusTagID:BBM_III04540
overlaps_old_locusTagID:BBM_III04555; overlaps_old_locusTagID:BBM_III04560
Eukaryotic translation initiation factor 3 subunit L
F-type H+-transporting ATPase oligomycin sensitivity conferral
overlaps_old_locusTagID:BBM_III04645; overlaps_old_locusTagID:BBM_III04650
transitional endoplasmic reticulum ATPase
overlaps_old_locusTagID:BBM_III04670; overlaps_old_locusTagID:BBM_III04675
Putative transferase CAF17 mitochondrial
overlaps_old_locusTagID:BBM_III04685; overlaps_old_locusTagID:BBM_III04690
Vacuolar protein sorting/targeting protein 10
overlaps_old_locusTagID:BBM_III04705; overlaps_old_locusTagID:BBM_III04710
protein phosphatase 3, regulatory subunit
overlaps_old_locusTagID:BBM_III04730; overlaps_old_locusTagID:BBM_III04735
Transcription factor IIIB 90 kDa subunit
protein transport protein SEC61 subunit gamma and related proteins
DNA-directed RNA polymerase II subunit A
asparagine synthase (glutamine-hydrolysing)