Babesia microti strain RI chromosome II, complete genome.
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Piroplasmida; Babesiidae; Babesia.
Genome-wide diversity and gene expression profiling of Babesia microti isolates identify polymorphic genes that mediate host-pathogen interactions
Whole genome mapping and re-organization of the nuclear and mitochondrial genomes of Babesia microti isolates
Sequencing of the smallest Apicomplexan genome from the human pathogen Babesia microti
Submitted (13-JUN-2017) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (02-FEB-2012) Genoscope - Centre National de Sequencage : BP 191 91006 EVRY cedex - FRANCE (E-mail : seqref@genoscope.cns.fr - Web : www.genoscope.cns.fr)
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to FO082872.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##
overlaps_old_locusTagID:BBM_II00015; overlaps_old_locusTagID:BBM_II00020; overlaps_old_locusTagID:BBM_II00025
Probable ATP-dependent RNA helicase DHX35
50S ribosomal protein L22, mitochondrial, putative
Domain of Kin17 curved DNA-binding protein
cytochrome c oxidase subunit XI assembly protein
conserved Plasmodium protein, unknown function
overlaps_old_locusTagID:BBM_II00080; overlaps_old_locusTagID:BBM_II00085
Ribosomal RNA small subunit methyltransferase H
overlaps_old_locusTagID:BBM_II00095; overlaps_old_locusTagID:BBM_II00100
UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase
Structural maintenance of chromosomes protein 6A
overlaps_old_locusTagID:BBM_II00115; overlaps_old_locusTagID:BBM_II00120
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
DNA-directed RNA polymerase subunit alpha
overlaps_old_locusTagID:BBM_II00155; overlaps_old_locusTagID:BBM_II00160
overlaps_old_locusTagID:BBM_II00170; overlaps_old_locusTagID:BBM_II00175
overlaps_old_locusTagID:BBM_II00220; overlaps_old_locusTagID:BBM_II00225
Mitochondrial ribosomal death-associated protein 3
overlaps_old_locusTagID:BBM_II00230; overlaps_old_locusTagID:BBM_II00235
MPP10, U3 small nucleolar RNA-associated protein MPP10
conserved Plasmodium membrane protein, unknown function
signal recognition particle subunit SRP19
overlaps_old_locusTagID:BBM_II00325; overlaps_old_locusTagID:BBM_II00330
translation initiation factor eIF-2B epsilon subunit
Probable geranylgeranyl transferase type-2 subunit beta
peroxiredoxin Q/BCP/ antioxidant, AhpC/TSA family
N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D
UTP11, U3 small nucleolar RNA-associated protein 11
Glucose-induced degradation protein 8 homolog
U3 small nucleolar RNA-associated protein 5
nitrogen fixation protein NifU and related proteins
F-type H+-transporting ATPase subunit gamma
overlaps_old_locusTagID:BBM_II00490; overlaps_old_locusTagID:BBM_II00495
overlaps_old_locusTagID:BBM_II00505; overlaps_old_locusTagID:BBM_II00510
overlaps_old_locusTagID:BBM_II00515; overlaps_old_locusTagID:BBM_II00520
succinate dehydrogenase (ubiquinone) iron-sulfur protein
Probable peptide chain release factor C12orf65 mitochondrial
vacuolar protein sorting-associated protein 3, putative (VPS3)
tetratricopeptide repeat family protein, putative
glycerol-3-phosphate O-acyltransferase / dihydroxyacetone phosphate
overlaps_old_locusTagID:BBM_II00565; overlaps_old_locusTagID:BBM_II00570
Methyltransferase-like protein 17 mitochondrial
DNA-directed RNA polymerase II subunit G
overlaps_old_locusTagID:BBM_II00585; overlaps_old_locusTagID:BBM_II00590
WDSOF1, WD repeat and SOF domain-containing protein 1
cell-traversal protein for ookinetes and sporozoites
DNA-directed RNA polymerase II subunit H
translation initiation factor eIF-3 subunit 10
RRP5, PDCD11, rRNA biogenesis protein RRP5
zinc finger (CCCH type) protein, putative
UTP21, WDR36, U3 small nucleolar RNA-associated protein 21
microtubule and actin binding protein, putative
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide)
MATH and LRR domain-containing protein PFE0570w
histone-lysine N-methyltransferase SETD8
transcription initiation factor TFIID subunit 10, putative (TAF10)
Developmentally-regulated GTP-binding protein 1
tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like
Phosphatidylinositol 4-phosphate 5-kinase 3
Translationally controlled tumour protein
Thioredoxin domain, FAS-associated factor 2
overlaps_old_locusTagID:BBM_II00855; overlaps_old_locusTagID:BBM_II00860
overlaps_old_locusTagID:BBM_II00870; overlaps_old_locusTagID:BBM_II00875
overlaps_old_locusTagID:BBM_II00885; overlaps_old_locusTagID:BBM_II00890
Trafficking protein particle complex subunit 3
BmGPI6, Conserved protein, unknown function
holo-(acyl-carrier protein) synthase, putative
Transcription initiation factor TFIID subunit 1
transmembrane emp24 domain-containing protein, putative
ubiquitin carboxyl-terminal hydrolase 5/13
overlaps_old_locusTagID:BBM_II00955; overlaps_old_locusTagID:BBM_II00960; overlaps_old_locusTagID:BBM_II00965
translation initiation factor eIF-3 subunit 4
overlaps_old_locusTagID:BBM_II00995; overlaps_old_locusTagID:BBM_II01000
glycerol-3-phosphate dehydrogenase (NAD+)
SDO1, SBDS, ribosome maturation protein SDO1
CCR4-NOT transcription complex subunit 4
translation initiation factor eIF-2 gamma subunit
actin-related protein 6, Plant like. ALP2
overlaps_old_locusTagID:BBM_II01140; overlaps_old_locusTagID:BBM_II01145
NAN1, UTP17, WDR75, NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
xeroderma pigmentosum group C-complementing protein
Protein transport protein Sec24-like At3g07100
F-type H+-transporting ATPase subunit beta
Acidic leucine-rich nuclear phosphoprotein 32-related protein
overlaps_old_locusTagID:BBM_II01340; overlaps_old_locusTagID:BBM_II01345
overlaps_old_locusTagID:BBM_II01365; overlaps_old_locusTagID:BBM_II01370
mitochondrial ribosomal protein S15 precursor, putative
Tetratricopeptide repeat protein 27 homolog
overlaps_old_locusTagID:BBM_II01390; overlaps_old_locusTagID:BBM_II01395
microsomal signal peptidase protein, putative (SPC1)
overlaps_old_locusTagID:BBM_II01405; overlaps_old_locusTagID:BBM_II01410
overlaps_old_locusTagID:BBM_II01435; overlaps_old_locusTagID:BBM_II01440
cysteine repeat modular protein 3 (CRMP3)
RNA polymerase III transcription factor (TF)IIIC subunit
overlaps_old_locusTagID:BBM_II01470; overlaps_old_locusTagID:BBM_II01475
overlaps_old_locusTagID:BBM_II01480; overlaps_old_locusTagID:BBM_II01485
overlaps_old_locusTagID:BBM_II01495; overlaps_old_locusTagID:BBM_II01500
Peptidyl-tRNA hydrolase ICT1 mitochondrial
overlaps_old_locusTagID:BBM_II01545; overlaps_old_locusTagID:BBM_II01550
RNA recognition motif. (a.k.a. RRM RBD or RNP domain)
DNA-directed RNA polymerase III subunit C2
protein farnesyltransferase/geranylgeranyltransferase type-1 subunit
overlaps_old_locusTagID:BBM_II01615; overlaps_old_locusTagID:BBM_II01620
U6 snRNA-associated Sm-like protein LSm7
mitochondrial import inner membrane translocase subunit TIM13, putative (TIM13)
overlaps_old_locusTagID:BBM_II01680; overlaps_old_locusTagID:BBM_II01685
Histone-lysine N-methyltransferase ATXR2
ATPase family AAA domain-containing protein 3
Histidine protein methyltransferase 1 homolog
26S proteasome non-ATPase regulatory subunit 10
Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2
overlaps_old_locusTagID:BBM_II01780; overlaps_old_locusTagID:BBM_II01785
cyclase-associated protein, putative (CAP)
overlaps_old_locusTagID:BBM_II01800; overlaps_old_locusTagID:BBM_II01805
overlaps_old_locusTagID:BBM_II01810; overlaps_old_locusTagID:BBM_II01815
overlaps_old_locusTagID:BBM_II01840; overlaps_old_locusTagID:BBM_II01845
orthologous to PfMRP, ABC transporter protein involved in chloroquine and quinine resistance
Iron only hydrogenase large subunit C-terminal domain
overlaps_old_locusTagID:BBM_II01905; overlaps_old_locusTagID:BBM_II01906
overlaps_old_locusTagID:BBM_II01965; overlaps_old_locusTagID:BBM_II01970
armadillo-domain containing rhoptry protein (ARO)
overlaps_old_locusTagID:BBM_II01985; overlaps_old_locusTagID:BBM_II01990; overlaps_old_locusTagID:BBM_II01995
overlaps_old_locusTagID:BBM_II02000; overlaps_old_locusTagID:BBM_II02005
2-oxoglutarate dehydrogenase E1 component
Vacuolar protein sorting-associated protein 53 A
NHP2, NOLA2, H/ACA ribonucleoprotein complex subunit 2
AP2/ERF domain-containing protein PFD0985w
ATP-dependent Clp protease ATP-binding subunit ClpB
trafficking protein particle complex subunit 2-like protein, putative (TRAPPC2L)
Meiotic recombination protein DMC1 homolog
small heat shock protein HSP20, putative (HSP20)
overlaps_old_locusTagID:BBM_II02185; overlaps_old_locusTagID:BBM_II02190
ATP-dependent Clp protease, protease subunit
Folate-sensitive fragile site protein Fra10Ac1
overlaps_old_locusTagID:BBM_II02210; overlaps_old_locusTagID:BBM_II02215
overlaps_old_locusTagID:BBM_II02230; overlaps_old_locusTagID:BBM_II02235; overlaps_old_locusTagID:BBM_II02240
overlaps_old_locusTagID:BBM_II02250; overlaps_old_locusTagID:BBM_II02255
glutamate--cysteine ligase catalytic subunit
overlaps_old_locusTagID:BBM_II02275; overlaps_old_locusTagID:BBM_II02280
Alpha-ketoglutarate-dependent dioxygenase alkB
overlaps_old_locusTagID:BBM_II02285; overlaps_old_locusTagID:BBM_II02290
DNA-directed RNA polymerase II subunit C
overlaps_old_locusTagID:BBM_II02300; overlaps_old_locusTagID:BBM_II02305
UDP-GlcNAc:polypeptide alpha-N-acetylglucosaminyltransferase
Eukaryotic translation initiation factor 3 subunit F
V-type H+-transporting ATPase subunit AC39
overlaps_old_locusTagID:BBM_II02420; overlaps_old_locusTagID:BBM_II02425; overlaps_old_locusTagID:BBM_II02430
NIP7, 60S ribosome subunit biogenesis protein NIP7
overlaps_old_locusTagID:BBM_II02445; overlaps_old_locusTagID:BBM_II02450
transcription factor with AP2 domain(s) (ApiAP2)
overlaps_old_locusTagID:BBM_II02450; overlaps_old_locusTagID:BBM_II02455
overlaps_old_locusTagID:BBM_II02480; overlaps_old_locusTagID:BBM_II02485
overlaps_old_locusTagID:BBM_II02485; overlaps_old_locusTagID:BBM_II02490
Probable ubiquitin-conjugating enzyme E2 W
mitochondrial fission 1 protein, putative (FIS1)
P-loop containing nucleoside triphosphate hydrolase, putative
overlaps_old_locusTagID:BBM_II02580; overlaps_old_locusTagID:BBM_II02585
overlaps_old_locusTagID:BBM_II02605; overlaps_old_locusTagID:BBM_II02610
overlaps_old_locusTagID:BBM_II02615; overlaps_old_locusTagID:BBM_II02620
Hit-like protein involved in cell-cycle regulation
U4/U6 small nuclear ribonucleoprotein PRP31
overlaps_old_locusTagID:BBM_II02645; overlaps_old_locusTagID:BBM_II02650
overlaps_old_locusTagID:BBM_II02650; overlaps_old_locusTagID:BBM_II02655
overlaps_old_locusTagID:BBM_II02660; overlaps_old_locusTagID:BBM_II02665
1-deoxy-D-xylulose-5-phosphate reductoisomerase
overlaps_old_locusTagID:BBM_II02675; overlaps_old_locusTagID:BBM_II02680
high molecular weight rhoptry protein 2 (RhopH2)
overlaps_old_locusTagID:BBM_II02700; overlaps_old_locusTagID:BBM_II02705
transcription initiation factor TFIID subunit D6
overlaps_old_locusTagID:BBM_II02715; overlaps_old_locusTagID:BBM_II02720
solute carrier family 26 (sodium-independent sulfate anion transporter)
overlaps_old_locusTagID:BBM_II02735; overlaps_old_locusTagID:BBM_II02740
NOP2, ribosomal RNA methyltransferase Nop2
overlaps_old_locusTagID:BBM_II02770; overlaps_old_locusTagID:BBM_II02775
nuclear protein localization protein 4 homolog
overlaps_old_locusTagID:BBM_II02770; overlaps_old_locusTagID:BBM_II02775; overlaps_old_locusTagID:BBM_II02780
overlaps_old_locusTagID:BBM_II02775; overlaps_old_locusTagID:BBM_II02780
BmGPI8, Sexual stage antigen, Pfam s48/45
overlaps_old_locusTagID:BBM_II02815; overlaps_old_locusTagID:BBM_II02820
peptidyl-prolyl cis-trans isomerase-like 2
overlaps_old_locusTagID:BBM_II02845; overlaps_old_locusTagID:BBM_II02850
overlaps_old_locusTagID:BBM_II02860; overlaps_old_locusTagID:BBM_II02865
protein phosphatase 2 (formerly 2A), regulatory subunit A
DIM1, 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
overlaps_old_locusTagID:BBM_II02880; overlaps_old_locusTagID:BBM_II02885
overlaps_old_locusTagID:BBM_II02910; overlaps_old_locusTagID:BBM_II02915
DNA-directed RNA polymerase III subunit C19
Vesicle-associated membrane protein-associated protein B
DNA-directed RNA Polymerase II subunit F
overlaps_old_locusTagID:BBM_II02975; overlaps_old_locusTagID:BBM_II02980
2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl)
overlaps_old_locusTagID:BBM_II02980; overlaps_old_locusTagID:BBM_II02985
inner membrane complex protein 1e, putative (IMC1e)
cytochrome c oxidase assembly protein, putative
mitochondrial ribosomal protein S6-2 precursor, putative
PWP2, UTP1, periodic tryptophan protein 2
overlaps_old_locusTagID:BBM_II03160; overlaps_old_locusTagID:BBM_II03165
overlaps_old_locusTagID:BBM_II03195; overlaps_old_locusTagID:BBM_II03200
overlaps_old_locusTagID:BBM_II03210; overlaps_old_locusTagID:BBM_II03215
overlaps_old_locusTagID:BBM_II03230; overlaps_old_locusTagID:BBM_II03235
mitochondrial inner membrane protease subunit 1
ATP-dependent Clp protease adaptor protein ClpS, putative
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
overlaps_old_locusTagID:BBM_II03315; overlaps_old_locusTagID:BBM_II03320
ubiquitin-like modifier-activating enzyme 5
Isocitrate/isopropylmalate dehydrogenase
Translation machinery-associated protein 22
signal recognition particle receptor subunit alpha
ethanolamine-phosphate cytidylyltransferase
overlaps_old_locusTagID:BBM_II03435; overlaps_old_locusTagID:BBM_II03440
Conserved hypothetical ATP binding protein
overlaps_old_locusTagID:BBM_II03450; overlaps_old_locusTagID:BBM_II03455
adenylyltransferase and sulfurtransferase
DHX15, PRP43, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43
overlaps_old_locusTagID:BBM_II03490; overlaps_old_locusTagID:BBM_II03495
Sugar efflux transporter for intercellular exchange
transcription factor with AP2 domain(s), putative (ApiAP2)
Putative 50S ribosomal protein L18 apicoplast
conserved membrane protein, unknown function
overlaps_old_locusTagID:BBM_II03580; overlaps_old_locusTagID:BBM_II03585
overlaps_old_locusTagID:BBM_II03590; overlaps_old_locusTagID:BBM_II03595
cyclin-dependent kinase regulatory subunit CKS1
overlaps_old_locusTagID:BBM_II03655; overlaps_old_locusTagID:BBM_II03660
overlaps_old_locusTagID:BBM_II03670; overlaps_old_locusTagID:BBM_II03675
Structural maintenance of chromosomes protein 5
mitochondrial ribosomal protein L37, putative
overlaps_old_locusTagID:BBM_II03715; overlaps_old_locusTagID:BBM_II03720
F-box and leucine-rich repeat protein GRR1
overlaps_old_locusTagID:BBM_II03775; overlaps_old_locusTagID:BBM_II03780
overlaps_old_locusTagID:BBM_II03790; overlaps_old_locusTagID:BBM_II03795
DNA-directed RNA polymerase III subunit C11
mitochondrial inner membrane TIM10 associated protein, putative
overlaps_old_locusTagID:BBM_II03825; overlaps_old_locusTagID:BBM_II03830
overlaps_old_locusTagID:BBM_II03845; overlaps_old_locusTagID:BBM_II03850
overlaps_old_locusTagID:BBM_II03900; overlaps_old_locusTagID:BBM_II03905
CDGSH iron-sulfur domain-containing protein, putative
DDX5, DBP2, ATP-dependent RNA helicase DDX5/DBP2
eRF1 methyltransferase catalytic subunit MTQ2
26S proteasome non-ATPase regulatory subunit 9
overlaps_old_locusTagID:BBM_II04010; overlaps_old_locusTagID:BBM_II04015
ribosomal protein L43, mitochondrial, putative
aspartate carbamoyltransferase catalytic subunit
overlaps_old_locusTagID:BBM_II04120; overlaps_old_locusTagID:BBM_II04125
UDP-N-acetylglucosamine pyrophosphorylase
U4/U6 small nuclear ribonucleoprotein PRP4
overlaps_old_locusTagID:BBM_II04190; overlaps_old_locusTagID:BBM_II04195
high mobility group protein B4, putative (HMGB4)
overlaps_old_locusTagID:BBM_II04200; overlaps_old_locusTagID:BBM_II04205
DDX54, DBP10, ATP-dependent RNA helicase DDX54/DBP10
BMN2 family, possible orthologue of N1-10-2
overlaps_old_locusTagID:BBM_II04275; overlaps_old_locusTagID:BBM_II04280