Melitaea cinxia chromosome 17, ilMelCinx1.1, whole genome shotgun sequence.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Nymphalidae; Nymphalinae; Melitaea.
The Glanville fritillary genome retains an ancient karyotype and reveals selective chromosomal fusions in Lepidoptera
REFSEQ INFORMATION: The reference sequence is identical to\nHG992226.1.\nAssembly name: ilMelCinx1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the WELLCOME SANGER INSTITUTE on\n2021/02/16.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: WELLCOME SANGER INSTITUTE\nAssembly Method :: SOAPdenovo v. 1.05; Newbler v. 2.6; MIP\n Scaffolder v. MARCH-2012\nAssembly Name :: MelCinx1.0\nLong Assembly Name :: Melitaea cinxia 1.0\nGenome Coverage :: 70.0x\nSequencing Technology :: Illumina; 454; SOLiD\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Melitaea cinxia Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00001
Derived by automated computational analysis using gene prediction method: Gnomon.
COORDINATES: polyA evidence [ECO:0006239]
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial
inhibitor of nuclear factor kappa-B kinase subunit epsilon
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 3% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 55% coverage of the annotated genomic feature by RNAseq alignments
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1
trafficking protein particle complex subunit 11
SAP30-binding protein, transcript variant X2
SAP30-binding protein, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
translin-associated factor X-interacting protein 1-like, transcript variant X1
translin-associated factor X-interacting protein 1-like
translin-associated factor X-interacting protein 1-like, transcript variant X3
translin-associated factor X-interacting protein 1-like, transcript variant X4
translin-associated factor X-interacting protein 1-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4, transcript variant X1
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4, transcript variant X2
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4
hormonally up-regulated neu tumor-associated kinase homolog A-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 24% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 87% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
COORDINATES: nucleotide motif:Rfam:12.0:RF00026
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
CCHC-type zinc finger nucleic acid binding protein, transcript variant X1
CCHC-type zinc finger nucleic acid binding protein, transcript variant X2
CCHC-type zinc finger nucleic acid binding protein, transcript variant X3
CCHC-type zinc finger nucleic acid binding protein
peptidylprolyl isomerase domain and WD repeat-containing protein 1
phospholipid-transporting ATPase ABCA3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
peroxisomal leader peptide-processing protease
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 62% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
RING finger and CHY zinc finger domain-containing protein 1
oxysterol-binding protein-related protein 9, transcript variant X1
oxysterol-binding protein-related protein 9
oxysterol-binding protein-related protein 9, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transfer RNA leucine (anticodon UAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
eukaryotic translation initiation factor 3 subunit J
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
mitochondrial potassium channel ATP-binding subunit
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
probable methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 37% coverage of the annotated genomic feature by RNAseq alignments
inactive selenide, water dikinase-like protein
chaetoglobosin A biosynthesis cluster protein C-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
bis(5'-nucleosyl)-tetraphosphatase [asymmetrical]
uncharacterized oxidoreductase YjmC-like
(2R)-3-sulfolactate dehydrogenase (NADP(+))-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 6% coverage of the annotated genomic feature by RNAseq alignments
transitional endoplasmic reticulum ATPase TER94
glutamate receptor ionotropic, NMDA 3A-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 2% coverage of the annotated genomic feature by RNAseq alignments
WD repeat-containing protein 91, transcript variant X1
WD repeat-containing protein 91, transcript variant X2
WD repeat-containing protein 91 isoform X1
WD repeat-containing protein 91 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
tyrosine-protein kinase receptor torso-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-like
phosphorylated adapter RNA export protein
chitooligosaccharidolytic beta-N-acetylglucosaminidase-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 45% coverage of the annotated genomic feature by RNAseq alignments
ankyrin repeat and LEM domain-containing protein 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123661723, transcript variant X2
uncharacterized LOC123661723, transcript variant X1
39S ribosomal protein L13, mitochondrial
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: leukotriene A-4 hydrolase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
28S ribosomal protein S17, mitochondrial
uncharacterized LOC123661517, transcript variant X2
uncharacterized LOC123661517, transcript variant X1
uncharacterized protein LOC123661517 isoform X2
uncharacterized protein LOC123661517 isoform X1
RNA polymerase II subunit A C-terminal domain phosphatase
high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
GPI ethanolamine phosphate transferase 2
peptidyl-prolyl cis-trans isomerase FKBP8-like
DNA replication complex GINS protein PSF3
X-ray repair cross-complementing protein 6
guanine nucleotide-binding protein G(o) subunit alpha, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
guanine nucleotide-binding protein G(o) subunit alpha, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
guanine nucleotide-binding protein G(o) subunit alpha isoform X3
guanine nucleotide-binding protein G(o) subunit alpha isoform X2
guanine nucleotide-binding protein G(o) subunit alpha, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
guanine nucleotide-binding protein G(o) subunit alpha isoform X1
THAP domain-containing protein 1-like, transcript variant X2
THAP domain-containing protein 1-like isoform X2
THAP domain-containing protein 1-like, transcript variant X1
THAP domain-containing protein 1-like isoform X1
cAMP-dependent protein kinase type II regulatory subunit
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
cilia- and flagella-associated protein 20-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
testis-specific serine/threonine-protein kinase 3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
ribonuclease kappa-like, transcript variant X1
ribonuclease kappa-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
pleckstrin homology domain-containing family F member 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
ejaculatory bulb-specific protein 3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 67 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: tyrosine-protein kinase hopscotch
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123661503, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
uncharacterized LOC123661503, transcript variant X1
microtubule-associated protein RP/EB family member 1
arrestin domain-containing protein F-like
uncharacterized LOC123661930, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
uncharacterized LOC123661930, transcript variant X1
eukaryotic translation elongation factor 1 epsilon-1
neuropeptide-like protein 31, transcript variant X2
probable H/ACA ribonucleoprotein complex subunit 1 isoform X2
protein FAM98B-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
protein FAM98B-like, transcript variant X1
neuropeptide-like protein 31, transcript variant X1
SH3 domain-containing protein C23A1.17-like
uncharacterized LOC123661537, transcript variant X2
uncharacterized LOC123661537, transcript variant X1
uncharacterized protein LOC123661537 isoform X2
uncharacterized protein LOC123661537 isoform X1
EF-hand domain-containing family member B-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
allergen Tha p 1-like, transcript variant X1
allergen Tha p 1-like, transcript variant X2
allergen Tha p 1-like, transcript variant X3
glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 22% coverage of the annotated genomic feature by RNAseq alignments
CREB-regulated transcription coactivator 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 38% coverage of the annotated genomic feature by RNAseq alignments
putative uncharacterized protein DDB_G0267716
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
coiled-coil domain-containing protein 112-like
tetratricopeptide repeat protein 19 homolog, mitochondrial
transmembrane protein adipocyte-associated 1 homolog, transcript variant X1
transmembrane protein adipocyte-associated 1 homolog, transcript variant X2
transmembrane protein adipocyte-associated 1 homolog isoform X1
transmembrane protein adipocyte-associated 1 homolog isoform X2
serine/threonine-protein kinase PRP4 homolog, transcript variant X1
serine/threonine-protein kinase PRP4 homolog, transcript variant X2
serine/threonine-protein kinase PRP4 homolog, transcript variant X7
serine/threonine-protein kinase PRP4 homolog, transcript variant X5
serine/threonine-protein kinase PRP4 homolog, transcript variant X4
serine/threonine-protein kinase PRP4 homolog, transcript variant X3
serine/threonine-protein kinase PRP4 homolog, transcript variant X6
serine/threonine-protein kinase PRP4 homolog isoform X2
serine/threonine-protein kinase PRP4 homolog isoform X1
pentatricopeptide repeat-containing protein 2, mitochondrial-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 55% coverage of the annotated genomic feature by RNAseq alignments
proton-coupled folate transporter-like, transcript variant X1
proton-coupled folate transporter-like, transcript variant X2
proton-coupled folate transporter-like isoform X2
uncharacterized protein LOC123661505 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 78% coverage of the annotated genomic feature by RNAseq alignments
histone-lysine N-methyltransferase SETMAR-like
A disintegrin and metalloproteinase with thrombospondin motifs 9-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
peptidyl-alpha-hydroxyglycine alpha-amidating lyase 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 52% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 21% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 47% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
DNA-directed RNA polymerases I, II, and III subunit RPABC1, transcript variant X3
DNA-directed RNA polymerases I, II, and III subunit RPABC1, transcript variant X4
DNA-directed RNA polymerases I, II, and III subunit RPABC1, transcript variant X1
DNA-directed RNA polymerases I, II, and III subunit RPABC1, transcript variant X2
DNA-directed RNA polymerases I, II, and III subunit RPABC1
leptin receptor gene-related protein, transcript variant X1
leptin receptor gene-related protein isoform X1
leptin receptor gene-related protein, transcript variant X2
leptin receptor gene-related protein isoform X2
COORDINATES: nucleotide motif:Rfam:12.0:RF00003
Down syndrome cell adhesion molecule-like protein Dscam2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 2% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 54 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
peroxisomal multifunctional enzyme type 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
angiogenic factor with G patch and FHA domains 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
mitotic spindle assembly checkpoint protein MAD1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
tRNA selenocysteine 1-associated protein 1
potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 52% coverage of the annotated genomic feature by RNAseq alignments
GPI ethanolamine phosphate transferase 3
2-amino-3-ketobutyrate coenzyme A ligase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments
dynein light chain Tctex-type 5-like, transcript variant X3
dynein light chain Tctex-type 5-like, transcript variant X1
dynein light chain Tctex-type 5-like, transcript variant X2
synaptic vesicle membrane protein VAT-1 homolog-like, transcript variant X2
synaptic vesicle membrane protein VAT-1 homolog-like, transcript variant X1
synaptic vesicle membrane protein VAT-1 homolog-like isoform X2
synaptic vesicle membrane protein VAT-1 homolog-like isoform X1
putative ribosome-binding factor A, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 45% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
probable splicing factor, arginine/serine-rich 7, transcript variant X2
probable splicing factor, arginine/serine-rich 7, transcript variant X1
probable splicing factor, arginine/serine-rich 7 isoform X2
probable splicing factor, arginine/serine-rich 7 isoform X1
store-operated calcium entry regulator STIMATE-like
heterogeneous nuclear ribonucleoprotein K
lysM and putative peptidoglycan-binding domain-containing protein 3, transcript variant X1
lysM and putative peptidoglycan-binding domain-containing protein 3, transcript variant X2
lysM and putative peptidoglycan-binding domain-containing protein 3 isoform X1
lysM and putative peptidoglycan-binding domain-containing protein 3 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
N(6)-adenine-specific methyltransferase METTL4
trimeric intracellular cation channel type 1B.1
transfer RNA proline (anticodon CGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
calcium and integrin-binding protein 1-like
uncharacterized LOC123661580, transcript variant X1
uncharacterized LOC123661580, transcript variant X2
uncharacterized protein LOC123661580 isoform X1
uncharacterized protein LOC123661580 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
cold and drought-regulated protein CORA-like, transcript variant X2
cold and drought-regulated protein CORA-like, transcript variant X1
cold and drought-regulated protein CORA-like isoform X2
cold and drought-regulated protein CORA-like isoform X1
cold and drought-regulated protein CORA-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 30% coverage of the annotated genomic feature by RNAseq alignments
glycine-rich cell wall structural protein-like, transcript variant X1
glycine-rich cell wall structural protein-like, transcript variant X2
glycine-rich cell wall structural protein-like isoform X1
glycine-rich cell wall structural protein-like isoform X2
uncharacterized LOC123661675, transcript variant X5
uncharacterized LOC123661675, transcript variant X3
uncharacterized LOC123661675, transcript variant X4
uncharacterized LOC123661675, transcript variant X2
uncharacterized LOC123661675, transcript variant X1
uncharacterized protein LOC123661675 isoform X5
uncharacterized protein LOC123661675 isoform X3
uncharacterized protein LOC123661675 isoform X4
uncharacterized protein LOC123661675 isoform X2
uncharacterized protein LOC123661675 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123661594, transcript variant X8
uncharacterized LOC123661594, transcript variant X7
uncharacterized LOC123661594, transcript variant X2
uncharacterized LOC123661594, transcript variant X6
uncharacterized LOC123661594, transcript variant X5
uncharacterized LOC123661594, transcript variant X4
uncharacterized LOC123661594, transcript variant X1
uncharacterized LOC123661594, transcript variant X3
uncharacterized protein LOC123661594 isoform X8
uncharacterized protein LOC123661594 isoform X7
uncharacterized protein LOC123661594 isoform X2
uncharacterized protein LOC123661594 isoform X6
uncharacterized protein LOC123661594 isoform X5
uncharacterized protein LOC123661594 isoform X4
uncharacterized protein LOC123661594 isoform X1
uncharacterized protein LOC123661594 isoform X3
transfer RNA alanine (anticodon AGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 73% coverage of the annotated genomic feature by RNAseq alignments
receptor-type tyrosine-protein phosphatase kappa
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
aldehyde dehydrogenase, dimeric NADP-preferring
ras-like GTP-binding protein Rho1, transcript variant X1
ras-like GTP-binding protein Rho1, transcript variant X2
ras-like GTP-binding protein Rho1 isoform X1
ras-like GTP-binding protein Rho1 isoform X2
ATP synthase subunit alpha, mitochondrial
PX domain-containing protein kinase-like protein
guanine nucleotide exchange factor subunit Rich
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
ATP-dependent (S)-NAD(P)H-hydrate dehydratase-like
BAG family molecular chaperone regulator 2
ubiquitin carboxyl-terminal hydrolase 14
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
DNA replication licensing factor MCM4, transcript variant X1
DNA replication licensing factor MCM4, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
1-acylglycerol-3-phosphate O-acyltransferase ABHD5, transcript variant X1
1-acylglycerol-3-phosphate O-acyltransferase ABHD5, transcript variant X2
1-acylglycerol-3-phosphate O-acyltransferase ABHD5 isoform X1
1-acylglycerol-3-phosphate O-acyltransferase ABHD5 isoform X2
adipokinetic hormone/corazonin-related peptide receptor variant I
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
gastrula zinc finger protein XlCGF7.1-like
cyclin-dependent kinases regulatory subunit
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 81% coverage of the annotated genomic feature by RNAseq alignments
leucine-rich repeat-containing protein 49
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
transient receptor potential cation channel trpm
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 30% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 75 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61% coverage of the annotated genomic feature by RNAseq alignments
esterase FE4-like, transcript variant X1
esterase FE4-like, transcript variant X2
venom carboxylesterase-6-like isoform X1
5-formyltetrahydrofolate cyclo-ligase, transcript variant X1
5-formyltetrahydrofolate cyclo-ligase, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
5-formyltetrahydrofolate cyclo-ligase isoform X1
5-formyltetrahydrofolate cyclo-ligase isoform X2
uncharacterized LOC123661599, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123661599, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
LOW QUALITY PROTEIN: protein fem-1 homolog B
peptide-N(4)-(N-acetyl-beta- glucosaminyl)asparagine amidase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 45% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123661644, transcript variant X1
uncharacterized LOC123661644, transcript variant X2
uncharacterized protein LOC123661644 isoform X1
uncharacterized protein LOC123661644 isoform X2
zinc finger SWIM domain-containing protein 4-like
sodium/potassium/calcium exchanger Nckx30C
hemocyte protein-glutamine gamma-glutamyltransferase-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
COORDINATES: nucleotide motif:Rfam:12.0:RF00020
regulator of hypoxia-inducible factor 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 35% coverage of the annotated genomic feature by RNAseq alignments
A disintegrin and metalloproteinase with thrombospondin motifs 16-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 49% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 58% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 85% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
probable protein BRICK1-B, transcript variant X6
probable protein BRICK1-B, transcript variant X5
probable protein BRICK1-B, transcript variant X3
probable protein BRICK1-B, transcript variant X2
probable protein BRICK1-B, transcript variant X1
probable protein BRICK1-B, transcript variant X4
3-ketoacyl-CoA thiolase, mitochondrial-like
probable methyltransferase-like protein 23
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
acyl-CoA-binding domain-containing protein 6
CCR4-NOT transcription complex subunit 11
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
nose resistant to fluoxetine protein 6-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments
epidermal growth factor receptor substrate 15-like 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
cleavage and polyadenylation specificity factor 73
general transcription factor IIH subunit 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
glucose dehydrogenase [FAD, quinone]-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments
general odorant-binding protein 1-like, transcript variant X2
general odorant-binding protein 1-like, transcript variant X3
general odorant-binding protein 1-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 83 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA tryptophan (anticodon CCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98 Proteins
transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 45% coverage of the annotated genomic feature by RNAseq alignments
endoplasmic reticulum metallopeptidase 1-like
guanine nucleotide-binding protein subunit beta-5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments