Melitaea cinxia chromosome 11, ilMelCinx1.1, whole genome shotgun sequence.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Nymphalidae; Nymphalinae; Melitaea.
The Glanville fritillary genome retains an ancient karyotype and reveals selective chromosomal fusions in Lepidoptera
REFSEQ INFORMATION: The reference sequence is identical to\nHG992220.1.\nAssembly name: ilMelCinx1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the WELLCOME SANGER INSTITUTE on\n2021/02/16.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: WELLCOME SANGER INSTITUTE\nAssembly Method :: SOAPdenovo v. 1.05; Newbler v. 2.6; MIP\n Scaffolder v. MARCH-2012\nAssembly Name :: MelCinx1.0\nLong Assembly Name :: Melitaea cinxia 1.0\nGenome Coverage :: 70.0x\nSequencing Technology :: Illumina; 454; SOLiD\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Melitaea cinxia Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
COORDINATES: polyA evidence [ECO:0006239]
piggyBac transposable element-derived protein 3-like
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00001
mothers against decapentaplegic homolog 6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 20% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: mothers against decapentaplegic homolog 6
heterogeneous nuclear ribonucleoprotein F-like
peptidyl-prolyl cis-trans isomerase-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
peptidyl-prolyl cis-trans isomerase G-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 19% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
scavenger receptor class B member 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 31% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 3% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 79% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123657546, transcript variant X1
uncharacterized LOC123657546, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
uncharacterized LOC123657546, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
RNA-binding protein squid, transcript variant X1
RNA-binding protein squid, transcript variant X4
RNA-binding protein squid, transcript variant X3
RNA-binding protein squid, transcript variant X2
COORDINATES: nucleotide motif:Rfam:12.0:RF00476
ras GTPase-activating protein-binding protein 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
programmed cell death 6-interacting protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
ATP synthase mitochondrial F1 complex assembly factor 1
WD40 repeat-containing protein SMU1, transcript variant X1
WD40 repeat-containing protein SMU1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 284 samples with support for all annotated introns
WD40 repeat-containing protein SMU1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 240 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
TWiK family of potassium channels protein 7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
organic cation/carnitine transporter 7-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: 4-hydroxybenzoate transporter PcaK-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 34% coverage of the annotated genomic feature by RNAseq alignments
ER membrane protein complex subunit 2-A-like
tRNA (guanine(10)-N2)-methyltransferase homolog
DNA replication licensing factor Mcm3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
DNA replication licensing factor Mcm3, transcript variant X1
lipid storage droplets surface-binding protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
lipid storage droplets surface-binding protein 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA leucine (anticodon CAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
cytoplasmic polyadenylation element-binding protein 1
eukaryotic translation initiation factor 4E type 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
leucine-rich melanocyte differentiation-associated protein-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 60% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transfer RNA glycine (anticodon GCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 49% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123657722, transcript variant X1
uncharacterized LOC123657722, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized LOC123657722, transcript variant X3
uncharacterized LOC123657724, transcript variant X2
uncharacterized LOC123657724, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
AN1-type zinc finger protein 6, transcript variant X1
AN1-type zinc finger protein 6, transcript variant X2
AN1-type zinc finger protein 6, transcript variant X3
AN1-type zinc finger protein 6, transcript variant X4
AN1-type zinc finger protein 6 isoform X1
AN1-type zinc finger protein 6, transcript variant X5
AN1-type zinc finger protein 5 isoform X2
progestin and adipoQ receptor family member 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 50% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
translation initiation factor eIF-2B subunit alpha, transcript variant X2
translation initiation factor eIF-2B subunit alpha isoform X2
translation initiation factor eIF-2B subunit alpha, transcript variant X1
translation initiation factor eIF-2B subunit alpha isoform X1
eukaryotic translation initiation factor 4B
uncharacterized LOC123657802, transcript variant X1
uncharacterized LOC123657802, transcript variant X2
transmembrane and ubiquitin-like domain-containing protein 1
60S ribosomal protein L15, transcript variant X2
60S ribosomal protein L15, transcript variant X1
ATP synthase lipid-binding protein, mitochondrial, transcript variant X1
ATP synthase lipid-binding protein, mitochondrial, transcript variant X2
ATP synthase lipid-binding protein, mitochondrial
juxtaposed with another zinc finger protein 1
vacuolar protein sorting-associated protein 16 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
insulin-like growth factor-binding protein 7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 28% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 68% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
heterogeneous nuclear ribonucleoprotein 87F-like, transcript variant X2
heterogeneous nuclear ribonucleoprotein 87F-like, transcript variant X1
heterogeneous nuclear ribonucleoprotein 87F-like
heterogeneous nuclear ribonucleoprotein A1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
ras-related C3 botulinum toxin substrate 1
leucine-rich repeat protein soc-2 homolog
cleavage stimulation factor subunit 2 tau variant
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 131 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 58 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
IQ and ubiquitin-like domain-containing protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
LIM and senescent cell antigen-like-containing domain protein 2
ATPase H(+)-transporting accessory protein 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
protein N-lysine methyltransferase METTL21D-like, transcript variant X1
protein N-lysine methyltransferase METTL21D-like, transcript variant X2
protein N-lysine methyltransferase METTL21D-like isoform X1
protein N-lysine methyltransferase METTL21D-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
retinoid-inducible serine carboxypeptidase-like
RUN and FYVE domain-containing protein 2-like
LOW QUALITY PROTEIN: RUN and FYVE domain-containing protein 2-like
malate dehydrogenase 3, cytoplasmic-like
uncharacterized LOC123657691, transcript variant X2
uncharacterized LOC123657691, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments
transcription elongation factor B polypeptide 3
S-phase kinase-associated protein 2-like, transcript variant X2
S-phase kinase-associated protein 2-like, transcript variant X1
S-phase kinase-associated protein 2-like
S-phase kinase-associated protein 2-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transmembrane emp24 domain-containing protein 7
myosin light chain alkali, transcript variant X2
myosin light chain alkali, transcript variant X1
transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 63% coverage of the annotated genomic feature by RNAseq alignments
pyrroline-5-carboxylate reductase 3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
myb/SANT-like DNA-binding domain-containing protein 3
putative inner dynein arm light chain, axonemal
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 45% coverage of the annotated genomic feature by RNAseq alignments
mediator of RNA polymerase II transcription subunit 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
probable ATP-dependent RNA helicase pitchoune
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase pitchoune
protein abrupt-like, transcript variant X1
protein abrupt-like, transcript variant X2
piggyBac transposable element-derived protein 2-like
uncharacterized protein K02A2.6-like, transcript variant X1
uncharacterized protein K02A2.6-like, transcript variant X2
uncharacterized protein K02A2.6-like isoform X1
uncharacterized protein K02A2.6-like isoform X2
non-structural maintenance of chromosomes element 1 homolog, transcript variant X2
non-structural maintenance of chromosomes element 1 homolog, transcript variant X1
non-structural maintenance of chromosomes element 1 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
mitochondrial transcription rescue factor 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 47% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 52% coverage of the annotated genomic feature by RNAseq alignments
vacuolar protein sorting-associated protein 4, transcript variant X1
vacuolar protein sorting-associated protein 4, transcript variant X2
vacuolar protein sorting-associated protein 4
U6 snRNA-associated Sm-like protein LSm8
solute carrier family 25 member 40-like, transcript variant X2
solute carrier family 25 member 40-like, transcript variant X1
solute carrier family 25 member 40-like isoform X1
solute carrier family 25 member 40-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
myb/SANT-like DNA-binding domain-containing protein 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transfer RNA phenylalanine (anticodon GAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
myosin regulatory light chain, smooth muscle, transcript variant X2
myosin regulatory light chain, smooth muscle, transcript variant X1
myosin regulatory light chain, smooth muscle isoform X1
uncharacterized LOC123657769, transcript variant X1
uncharacterized LOC123657769, transcript variant X2
zinc finger CCHC domain-containing protein 3-like
PI-actitoxin-Aeq3a-like, transcript variant X1
PI-actitoxin-Aeq3a-like, transcript variant X2
PI-actitoxin-Aeq3a-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 29% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
DNA-directed RNA polymerase I subunit RPA12, transcript variant X1
DNA-directed RNA polymerase I subunit RPA12, transcript variant X2
DNA-directed RNA polymerase I subunit RPA12
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
peripheral plasma membrane protein CASK-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 22% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
vacuolar protein sorting-associated protein 72 homolog
C3 and PZP-like alpha-2-macroglobulin domain-containing protein 8
neuropeptide F-like, transcript variant X1
neuropeptide F-like, transcript variant X2
uncharacterized protein LOC123657859 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 73% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
sodium/potassium-transporting ATPase subunit beta-2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial
heat shock protein 68-like, transcript variant X3
heat shock protein 68-like, transcript variant X1
heat shock protein 68-like, transcript variant X2
CCR4-NOT transcription complex subunit 6-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
CCR4-NOT transcription complex subunit 6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
28S ribosomal protein S24, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: collagen alpha-1(I) chain-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
ankyrin repeat domain-containing protein 17
alpha-2-macroglobulin receptor-associated protein, transcript variant X2
alpha-2-macroglobulin receptor-associated protein, transcript variant X1
alpha-2-macroglobulin receptor-associated protein isoform X2
alpha-2-macroglobulin receptor-associated protein isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
RING finger and transmembrane domain-containing protein 2
ADP-ribosylation factor-like protein 6-interacting protein 4, transcript variant X1
ADP-ribosylation factor-like protein 6-interacting protein 4, transcript variant X2
ADP-ribosylation factor-like protein 6-interacting protein 4
thioredoxin domain-containing protein 5 homolog
dorsal-ventral patterning tolloid-like protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
heterogeneous nuclear ribonucleoprotein R
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 60% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
BPTI/Kunitz domain-containing protein-like
ras-related protein Rab-18, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
ras-related protein Rab-18, transcript variant X1
venom prothrombin activator vestarin-D1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123657707, transcript variant X2
uncharacterized LOC123657707, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 45% coverage of the annotated genomic feature by RNAseq alignments
putative leucine-rich repeat-containing protein DDB_G0290503
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments
trafficking protein particle complex subunit 1-like
mitochondrial import inner membrane translocase subunit Tim17-B
gelsolin-related protein of 125 kDa-like, transcript variant X3
gelsolin-related protein of 125 kDa-like, transcript variant X1
gelsolin-related protein of 125 kDa-like, transcript variant X2
gelsolin-related protein of 125 kDa-like isoform X3
structural maintenance of chromosomes protein 2-like isoform X1
uncharacterized protein LOC123657736 isoform X2
COORDINATES: nucleotide motif:Rfam:12.0:RF00015
fragile X mental retardation syndrome-related protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
phenylalanine--tRNA ligase alpha subunit
saccharopine dehydrogenase-like oxidoreductase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
pyruvate dehydrogenase E1 component subunit beta, mitochondrial, transcript variant X2
pyruvate dehydrogenase E1 component subunit beta, mitochondrial, transcript variant X1
pyruvate dehydrogenase E1 component subunit beta, mitochondrial isoform X1
pyruvate dehydrogenase E1 component subunit beta, mitochondrial isoform X2
piggyBac transposable element-derived protein 4-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 16% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA arginine (anticodon UCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.