Melitaea cinxia chromosome 7, ilMelCinx1.1, whole genome shotgun sequence.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Nymphalidae; Nymphalinae; Melitaea.
The Glanville fritillary genome retains an ancient karyotype and reveals selective chromosomal fusions in Lepidoptera
REFSEQ INFORMATION: The reference sequence is identical to\nHG992216.1.\nAssembly name: ilMelCinx1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the WELLCOME SANGER INSTITUTE on\n2021/02/16.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: WELLCOME SANGER INSTITUTE\nAssembly Method :: SOAPdenovo v. 1.05; Newbler v. 2.6; MIP\n Scaffolder v. MARCH-2012\nAssembly Name :: MelCinx1.0\nLong Assembly Name :: Melitaea cinxia 1.0\nGenome Coverage :: 70.0x\nSequencing Technology :: Illumina; 454; SOLiD\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Melitaea cinxia Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00001
Derived by automated computational analysis using gene prediction method: Gnomon.
acetylcholine receptor subunit alpha-like
COORDINATES: polyA evidence [ECO:0006239]
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 35% coverage of the annotated genomic feature by RNAseq alignments
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: sodium channel protein Nach-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA arginine (anticodon CCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
phospholipase B1, membrane-associated-like
transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
V-type proton ATPase 116 kDa subunit a1, transcript variant X1
V-type proton ATPase 116 kDa subunit a1, transcript variant X2
V-type proton ATPase 116 kDa subunit a1, transcript variant X3
V-type proton ATPase 116 kDa subunit a1 isoform X1
V-type proton ATPase 116 kDa subunit a1 isoform X2
V-type proton ATPase 116 kDa subunit a1 isoform X3
platelet endothelial aggregation receptor 1-like
angiotensin-converting enzyme-like protein Ace3
non-classical arabinogalactan protein 31-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA histidin (anticodon GUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123655206, transcript variant X3
uncharacterized LOC123655206, transcript variant X1
uncharacterized LOC123655206, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
acid sphingomyelinase-like phosphodiesterase 3a
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
calcium-binding mitochondrial carrier protein Aralar1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 49% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
calcium-activated potassium channel slowpoke
uncharacterized LOC123655216, transcript variant X1
uncharacterized LOC123655216, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123655223, transcript variant X2
uncharacterized LOC123655223, transcript variant X1
transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
pyruvate kinase-like, transcript variant X2
pyruvate kinase-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 54% coverage of the annotated genomic feature by RNAseq alignments
histone-lysine N-methyltransferase 2C-like
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 3 bases at 3 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: histone-lysine N-methyltransferase 2C-like
thiosulfate:glutathione sulfurtransferase-like
putative thiosulfate sulfurtransferase, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 57% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
putative uncharacterized protein DDB_G0282133
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
2-oxoglutarate dehydrogenase, mitochondrial-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
ribonuclease P protein subunit p30, transcript variant X1
ribonuclease P protein subunit p30, transcript variant X2
ribonuclease P protein subunit p30 isoform X1
ribonuclease P protein subunit p30 isoform X2
interleukin-1 receptor-associated kinase 4-like
NPC intracellular cholesterol transporter 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins
uncharacterized protein C15orf61 homolog, transcript variant X1
uncharacterized protein C15orf61 homolog, transcript variant X2
uncharacterized protein C15orf61 homolog isoform X1
uncharacterized protein C15orf61 homolog isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
tetratricopeptide repeat protein 21B-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
A disintegrin and metalloproteinase with thrombospondin motifs 3-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 3-like
peptidyl-prolyl cis-trans isomerase-like
piggyBac transposable element-derived protein 4-like
disintegrin and metalloproteinase domain-containing protein 10
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 52% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 80% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
mannosyl-oligosaccharide alpha-1,2-mannosidase IA
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
CDGSH iron-sulfur domain-containing protein 2 homolog
BRISC and BRCA1-A complex member 1-like, transcript variant X2
BRISC and BRCA1-A complex member 1-like, transcript variant X1
BRISC and BRCA1-A complex member 1-like, transcript variant X3
BRISC and BRCA1-A complex member 1-like isoform X2
BRISC and BRCA1-A complex member 1-like isoform X1
BRISC and BRCA1-A complex member 1-like isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
MICOS complex subunit MIC13 homolog QIL1
glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic, transcript variant X1
glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic, transcript variant X2
glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic isoform X2
glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic isoform X1
glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic isoform X3
methionyl-tRNA formyltransferase, mitochondrial
acetylcholine receptor subunit alpha-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 242 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
acetylcholine receptor subunit alpha-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 239 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
acetylcholine receptor subunit alpha-like isoform X1
acetylcholine receptor subunit alpha-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
complex III assembly factor LYRM7, transcript variant X2
complex III assembly factor LYRM7 isoform X2
complex III assembly factor LYRM7, transcript variant X1
complex III assembly factor LYRM7 isoform X1
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial-like
SH3 domain-containing kinase-binding protein 1-like
leucine-rich melanocyte differentiation-associated protein-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
bifunctional purine biosynthesis protein ATIC
dnaJ homolog subfamily A member 1, transcript variant X1
dnaJ homolog subfamily A member 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
MKI67 FHA domain-interacting nucleolar phosphoprotein-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
MKI67 FHA domain-interacting nucleolar phosphoprotein-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
MKI67 FHA domain-interacting nucleolar phosphoprotein-like isoform X1
MKI67 FHA domain-interacting nucleolar phosphoprotein-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 30% coverage of the annotated genomic feature by RNAseq alignments
sterile alpha motif domain-containing protein 5-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 43% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123655300, transcript variant X1
uncharacterized LOC123655300, transcript variant X2
uncharacterized protein LOC123655300 isoform X1
uncharacterized protein LOC123655300 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 27% coverage of the annotated genomic feature by RNAseq alignments
3-oxoacyl-[acyl-carrier-protein] reductase FabG-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 28% coverage of the annotated genomic feature by RNAseq alignments
vacuolar protein sorting-associated protein 13
pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1
pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2
altered inheritance of mitochondria protein 3 isoform X4
probable E3 ubiquitin-protein ligase HERC4
zinc finger SWIM domain-containing protein 8 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
alanine--glyoxylate aminotransferase 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
GATA zinc finger domain-containing protein 14-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
signal recognition particle 19 kDa protein
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4
mitotic checkpoint serine/threonine-protein kinase BUB1 beta-like
ATP-dependent (S)-NAD(P)H-hydrate dehydratase
26S proteasome non-ATPase regulatory subunit 5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
coiled-coil domain-containing protein 12
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
signal transducer and activator of transcription C
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
all trans-polyprenyl-diphosphate synthase PDSS1
39S ribosomal protein L32, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 82% coverage of the annotated genomic feature by RNAseq alignments
major facilitator superfamily domain-containing protein 9-like
ras-related and estrogen-regulated growth inhibitor-like protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123655335, transcript variant X2
uncharacterized LOC123655335, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1
U-scoloptoxin(05)-Sm1a, transcript variant X1
U-scoloptoxin(05)-Sm1a, transcript variant X2
uncharacterized protein LOC123655340 isoform X2
zinc finger MIZ domain-containing protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins
G protein alpha q subunit, transcript variant X2
G protein alpha q subunit, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 45% coverage of the annotated genomic feature by RNAseq alignments
acidic leucine-rich nuclear phosphoprotein 32 family member A, transcript variant X1
acidic leucine-rich nuclear phosphoprotein 32 family member A, transcript variant X2
acidic leucine-rich nuclear phosphoprotein 32 family member A isoform X1
acidic leucine-rich nuclear phosphoprotein 32 family member A isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 15% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 84% coverage of the annotated genomic feature by RNAseq alignments
cell division cycle and apoptosis regulator protein 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
putative sodium-dependent multivitamin transporter
migration and invasion enhancer 1, transcript variant X1
migration and invasion enhancer 1, transcript variant X2
migration and invasion enhancer 1 isoform X1
migration and invasion enhancer 1 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: molybdenum cofactor sulfurase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
poly(rC)-binding protein 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
poly(rC)-binding protein 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcription initiation factor TFIID subunit 13, transcript variant X2
transcription initiation factor TFIID subunit 13, transcript variant X1
transcription initiation factor TFIID subunit 13
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 71% coverage of the annotated genomic feature by RNAseq alignments
tubulin-specific chaperone D, transcript variant X1
tubulin-specific chaperone D, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 55% coverage of the annotated genomic feature by RNAseq alignments
putative mediator of RNA polymerase II transcription subunit 26
zinc finger protein 37-like, transcript variant X1
zinc finger protein 37-like, transcript variant X2
corticotropin-releasing factor-binding protein, transcript variant X1
corticotropin-releasing factor-binding protein
corticotropin-releasing factor-binding protein, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57% coverage of the annotated genomic feature by RNAseq alignments
opioid-binding protein/cell adhesion molecule homolog
COORDINATES: nucleotide motif:Rfam:12.0:RF00026
uncharacterized LOC123655006, transcript variant X4
uncharacterized LOC123655007, transcript variant X2
uncharacterized LOC123655006, transcript variant X2
uncharacterized LOC123655006, transcript variant X1
uncharacterized LOC123655006, transcript variant X3
uncharacterized LOC123655007, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
signal peptidase complex catalytic subunit SEC11A
nedd8-activating enzyme E1 catalytic subunit
ATP synthase subunit beta, mitochondrial-like
ubiquinol-cytochrome-c reductase complex assembly factor 1
ATP synthase subunit beta, mitochondrial
60S ribosomal protein L24, transcript variant X2
60S ribosomal protein L24, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 64% coverage of the annotated genomic feature by RNAseq alignments
U3 small nucleolar RNA-associated protein 18 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transfer RNA arginine (anticodon UCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
peptidoglycan recognition protein-like, transcript variant X1
peptidoglycan recognition protein-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 21% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
sodium- and chloride-dependent glycine transporter 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
bolA-like protein DDB_G0274169, transcript variant X3
bolA-like protein DDB_G0274169, transcript variant X2
bolA-like protein DDB_G0274169, transcript variant X1
bolA-like protein DDB_G0274169 isoform X1
bolA-like protein DDB_G0274169 isoform X2
set1/Ash2 histone methyltransferase complex subunit ASH2
2-acylglycerol O-acyltransferase 2-A-like
uncharacterized LOC123655408, transcript variant X4
uncharacterized LOC123655408, transcript variant X3
uncharacterized LOC123655408, transcript variant X2
uncharacterized LOC123655408, transcript variant X1
uncharacterized protein LOC123655408 isoform X1
uncharacterized protein LOC123655408 isoform X4
uncharacterized protein LOC123655408 isoform X3
uncharacterized protein LOC123655408 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
nuclear envelope integral membrane protein 1a
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 82% coverage of the annotated genomic feature by RNAseq alignments
katanin p60 ATPase-containing subunit A1-like
V-type proton ATPase 116 kDa subunit a1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: membrane alanyl aminopeptidase-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 28% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
LOW QUALITY PROTEIN: TBC1 domain family member 5
vacuolar protein sorting-associated protein 51 homolog
MATH and LRR domain-containing protein PFE0570w-like
5-aminolevulinate synthase, nonspecific, mitochondrial
phosphatidylinositol-glycan biosynthesis class F protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
inner nuclear membrane protein Man1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
dynein regulatory complex protein 11-like
transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
delta(7)-sterol 5(6)-desaturase erg32-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 3% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.