Pseudorhizobium banfieldiae strain NT-26 plasmid NT26_p1, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Pseudorhizobium.
Life in an arsenic-containing gold mine: genome and physiology of the autotrophic arsenite-oxidizing bacterium rhizobium sp. NT-26
Submitted (15-DEC-2011) Genoscope - Centre National de Sequencage : BP 191 91006 EVRY cedex - FRANCE (E-mail : seqref@genoscope.cns.fr - Web : www.genoscope.cns.fr)
REFSEQ INFORMATION: The reference sequence is identical to\nFO082821.1.\nAnnotation results relative to BLAST similarities, COG\nassignations, enzymatic function prediction (PRIAM software), TMHMM\nand SignalP predictions, and synteny conservation (Syntonizer\nsoftware) are available in the MicroScope annotation system\nhttp://www.genoscope.cns.fr/agc/microscope.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/25/2023 03:25:41\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,475\nCDSs (total) :: 4,412\nGenes (coding) :: 4,356\nCDSs (with protein) :: 4,356\nGenes (RNA) :: 63\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 50\nncRNAs :: 4\nPseudo Genes (total) :: 56\nCDSs (without protein) :: 56\nPseudo Genes (ambiguous residues) :: 0 of 56\nPseudo Genes (frameshifted) :: 24 of 56\nPseudo Genes (incomplete) :: 40 of 56\nPseudo Genes (internal stop) :: 6 of 56\nPseudo Genes (multiple problems) :: 11 of 56\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Pseudorhizobium banfieldiae
COORDINATES: ab initio prediction:GeneMarkS-2+
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_012187243.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010138187.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009827042.1
COORDINATES: similar to AA sequence:RefSeq:WP_009820070.1
COORDINATES: similar to AA sequence:RefSeq:WP_012187387.1
COORDINATES: similar to AA sequence:RefSeq:WP_018010711.1
ISL3-like element ISRsp8 family transposase
COORDINATES: protein motif:HMM:TIGR00180.1
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_013851074.1
COORDINATES: protein motif:HMM:NF012698.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007529217.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0015416 - ABC-type phosphonate transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0015716 - organic phosphonate transport [Evidence IEA]
phosphonate ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003536462.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
phosphonate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003536461.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015416 - ABC-type phosphonate transporter activity [Evidence IEA]
phosphonate ABC transporter, permease protein PhnE
COORDINATES: similar to AA sequence:RefSeq:WP_012654712.1
COORDINATES: similar to AA sequence:RefSeq:WP_011995880.1
COORDINATES: similar to AA sequence:RefSeq:WP_018898307.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
phosphate regulon transcriptional regulator PhoB
COORDINATES: similar to AA sequence:RefSeq:WP_018234940.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_003530182.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: similar to AA sequence:RefSeq:WP_013654009.1
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008840430.1
phosphate ABC transporter permease subunit PstC
COORDINATES: similar to AA sequence:RefSeq:WP_015047840.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008837482.1
COORDINATES: similar to AA sequence:RefSeq:WP_006724588.1
periplasmic arsenite-binding protein AioX
COORDINATES: similar to AA sequence:RefSeq:WP_006724589.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0007165 - signal transduction [Evidence IEA]
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_006724590.1
arsenic response regulator transcription factor AioR
COORDINATES: similar to AA sequence:RefSeq:WP_003518816.1
GO:0050611 - arsenate reductase (azurin) activity [Evidence IEA]
arsenate reductase (azurin) small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_003518815.1
arsenate reductase (azurin) large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_006724593.1
COORDINATES: similar to AA sequence:RefSeq:WP_003518811.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006726475.1
COORDINATES: similar to AA sequence:RefSeq:WP_006726474.1
COORDINATES: similar to AA sequence:RefSeq:WP_006726473.1
COORDINATES: similar to AA sequence:RefSeq:WP_003518828.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0043168 - anion binding [Evidence IEA]; GO:0043225 - ATPase-coupled inorganic anion transmembrane transporter activity [Evidence IEA]
phosphate/phosphite/phosphonate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF024949.2
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012653067.1
COORDINATES: similar to AA sequence:RefSeq:WP_015241491.1
COORDINATES: similar to AA sequence:RefSeq:WP_015241492.1
COORDINATES: similar to AA sequence:RefSeq:WP_012653070.1
COORDINATES: similar to AA sequence:RefSeq:WP_003537747.1
COORDINATES: similar to AA sequence:RefSeq:WP_012653074.1
COORDINATES: similar to AA sequence:RefSeq:WP_014330893.1
COORDINATES: similar to AA sequence:RefSeq:WP_020811909.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003910 - DNA ligase (ATP) activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008946213.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011542955.1
mercuric transporter MerT family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004213249.1
GO:0046872 - metal ion binding [Evidence IEA]
heavy metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008946217.1
GO:0016152 - mercury (II) reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008214509.1
COORDINATES: similar to AA sequence:RefSeq:WP_015933477.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019197559.1
COORDINATES: similar to AA sequence:RefSeq:WP_018404620.1
COORDINATES: protein motif:HMM:NF015180.2
COORDINATES: similar to AA sequence:RefSeq:WP_006559417.1
COORDINATES: similar to AA sequence:RefSeq:WP_020326821.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012653077.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014330304.1
COORDINATES: similar to AA sequence:RefSeq:WP_003501009.1
COORDINATES: similar to AA sequence:RefSeq:WP_012881324.1
COORDINATES: similar to AA sequence:RefSeq:WP_003534459.1
COORDINATES: similar to AA sequence:RefSeq:WP_012653083.1
COORDINATES: similar to AA sequence:RefSeq:WP_012653084.1
zincin-like metallopeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012559808.1
COORDINATES: similar to AA sequence:RefSeq:WP_012559809.1
COORDINATES: similar to AA sequence:RefSeq:WP_018009858.1
COORDINATES: similar to AA sequence:RefSeq:WP_007602596.1
COORDINATES: similar to AA sequence:RefSeq:WP_014330854.1
COORDINATES: similar to AA sequence:RefSeq:WP_007601950.1
COORDINATES: similar to AA sequence:RefSeq:WP_007601952.1
COORDINATES: similar to AA sequence:RefSeq:WP_014531058.1
COORDINATES: similar to AA sequence:RefSeq:WP_017265125.1
type IV secretory system conjugative DNA transfer family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015241453.1
GO:0043684 - type IV secretion system complex [Evidence IEA]
GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017268591.1
COORDINATES: similar to AA sequence:RefSeq:WP_011982855.1
P-type conjugative transfer protein VirB9
COORDINATES: similar to AA sequence:RefSeq:WP_013845309.1
COORDINATES: similar to AA sequence:RefSeq:WP_009469549.1
COORDINATES: similar to AA sequence:RefSeq:WP_009469550.1
COORDINATES: similar to AA sequence:RefSeq:WP_009469551.1
COORDINATES: similar to AA sequence:RefSeq:WP_014531075.1
GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011971088.1
VirB4 family type IV secretion/conjugal transfer ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_014531077.1
VirB3 family type IV secretion system protein
COORDINATES: similar to AA sequence:RefSeq:WP_009469555.1
COORDINATES: similar to AA sequence:RefSeq:WP_013845317.1
COORDINATES: similar to AA sequence:RefSeq:WP_013845318.1
COORDINATES: similar to AA sequence:RefSeq:WP_012653026.1
COORDINATES: similar to AA sequence:RefSeq:WP_009469559.1
COORDINATES: similar to AA sequence:RefSeq:WP_018327238.1
COORDINATES: similar to AA sequence:RefSeq:WP_018327239.1
COORDINATES: similar to AA sequence:RefSeq:WP_004256524.1
COORDINATES: similar to AA sequence:RefSeq:WP_003046486.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0015662 - P-type ion transporter activity [Evidence IEA]
GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008032388.1
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011331460.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011908440.1
GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020810080.1
COORDINATES: similar to AA sequence:RefSeq:WP_003518821.1
PstS family phosphate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003518832.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_020012505.1
GO:0030612 - arsenate reductase (thioredoxin) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020810062.1
GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence IEA]
This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite, after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell, providing resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011969943.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020810060.1
ArsO family NAD(P)H-dependent flavin-containing monooxygenase
COORDINATES: similar to AA sequence:RefSeq:WP_007817347.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020810058.1
GO:0003674 - molecular_function [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012757878.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018698109.1
COORDINATES: similar to AA sequence:RefSeq:WP_012559807.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012559806.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_012559805.1
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_006724016.1
COORDINATES: similar to AA sequence:RefSeq:WP_007090689.1
COORDINATES: similar to AA sequence:RefSeq:WP_011488751.1
COORDINATES: similar to AA sequence:RefSeq:WP_007606268.1
COORDINATES: similar to AA sequence:RefSeq:WP_011488749.1
COORDINATES: protein motif:HMM:NF024700.2
COORDINATES: similar to AA sequence:RefSeq:WP_004677292.1
GO:0110001 - toxin-antitoxin complex [Evidence IEA]
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_015916467.1
COORDINATES: similar to AA sequence:RefSeq:WP_018389465.1
COORDINATES: protein motif:HMM:NF016648.2
GO:0016989 - sigma factor antagonist activity [Evidence IEA]; GO:0004888 - transmembrane signaling receptor activity [Evidence IEA]
GO:0006811 - monoatomic ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: similar to AA sequence:RefSeq:WP_007762443.1
COORDINATES: similar to AA sequence:RefSeq:WP_018011992.1
siderophore ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011157937.1
iron chelate uptake ABC transporter family permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011157936.1
COORDINATES: similar to AA sequence:RefSeq:WP_018430771.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011428069.1
COORDINATES: similar to AA sequence:RefSeq:WP_018184004.1
COORDINATES: similar to AA sequence:RefSeq:WP_018390382.1
GO:0015099 - nickel cation transmembrane transporter activity [Evidence IEA]
GO:0035444 - nickel cation transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011970463.1
COORDINATES: similar to AA sequence:RefSeq:WP_014531448.1
COORDINATES: similar to AA sequence:RefSeq:WP_009827341.1
COORDINATES: similar to AA sequence:RefSeq:WP_018236829.1
COORDINATES: protein motif:HMM:NF012257.2
GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011580255.1
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018009124.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014758.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007802676.1
GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO:0015703 - chromate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007816351.1
sulfurtransferase/chromate resistance protein
COORDINATES: similar to AA sequence:RefSeq:WP_018485049.1
COORDINATES: similar to AA sequence:RefSeq:WP_011251550.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003501078.1
COORDINATES: similar to AA sequence:RefSeq:WP_003501076.1
mercury resistance system transport protein MerF
COORDINATES: similar to AA sequence:RefSeq:WP_012564872.1
COORDINATES: similar to AA sequence:RefSeq:WP_003501072.1
COORDINATES: similar to AA sequence:RefSeq:WP_010661779.1
COORDINATES: similar to AA sequence:RefSeq:WP_017980797.1
GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009807499.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013654509.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013654510.1
COORDINATES: protein motif:HMM:NF019604.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018238738.1
GO:0016740 - transferase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
murein L,D-transpeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_052642687.1
IS6-like element ISRsp9 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_003572075.1
GSU2403 family nucleotidyltransferase fold protein
COORDINATES: similar to AA sequence:RefSeq:WP_018918118.1
COORDINATES: similar to AA sequence:RefSeq:WP_011907511.1
GO:0006801 - superoxide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017088.2
COORDINATES: similar to AA sequence:RefSeq:WP_014249513.1
GO:0042314 - bacteriochlorophyll binding [Evidence IEA]
GO:0019684 - photosynthesis, light reaction [Evidence IEA]
COORDINATES: protein motif:HMM:NF016513.2
COORDINATES: similar to AA sequence:RefSeq:WP_014327729.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0006950 - response to stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012111983.1
PQQ-binding-like beta-propeller repeat protein
COORDINATES: protein motif:HMM:NF012264.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006391046.1
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: similar to AA sequence:RefSeq:WP_009574206.1
COORDINATES: similar to AA sequence:RefSeq:WP_009827215.1
COORDINATES: similar to AA sequence:RefSeq:WP_010398665.1
COORDINATES: similar to AA sequence:RefSeq:WP_019088725.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001787.1
COORDINATES: similar to AA sequence:RefSeq:WP_005859736.1
COORDINATES: similar to AA sequence:RefSeq:WP_008887615.1
COORDINATES: similar to AA sequence:RefSeq:WP_005617048.1
COORDINATES: similar to AA sequence:RefSeq:WP_009827208.1
COORDINATES: similar to AA sequence:RefSeq:WP_018065906.1
COORDINATES: similar to AA sequence:RefSeq:WP_005859719.1
COORDINATES: similar to AA sequence:RefSeq:WP_007803272.1
COORDINATES: similar to AA sequence:RefSeq:WP_009179369.1
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: similar to AA sequence:RefSeq:WP_010398685.1
COORDINATES: similar to AA sequence:RefSeq:WP_009820093.1
COORDINATES: similar to AA sequence:RefSeq:WP_009450564.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
antitoxin of toxin-antitoxin stability system
COORDINATES: similar to AA sequence:RefSeq:WP_009820095.1
COORDINATES: similar to AA sequence:RefSeq:WP_009820096.1
COORDINATES: similar to AA sequence:RefSeq:WP_007792353.1
COORDINATES: similar to AA sequence:RefSeq:WP_010398696.1
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010398697.1
COORDINATES: similar to AA sequence:RefSeq:WP_009820102.1
COORDINATES: similar to AA sequence:RefSeq:WP_018065919.1
bifunctional class I SAM-dependent methyltransferase/DEAD/DEAH box helicase
COORDINATES: similar to AA sequence:RefSeq:WP_009820104.1
COORDINATES: similar to AA sequence:RefSeq:WP_007803302.1
COORDINATES: similar to AA sequence:RefSeq:WP_014090298.1
COORDINATES: similar to AA sequence:RefSeq:WP_016713038.1
COORDINATES: similar to AA sequence:RefSeq:WP_020067000.1
COORDINATES: similar to AA sequence:RefSeq:WP_010398667.1
COORDINATES: similar to AA sequence:RefSeq:WP_015241702.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612398.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
Tn3-like element ISRsp12 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_006706936.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611638.1
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014794.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008641240.1
COORDINATES: similar to AA sequence:RefSeq:WP_013542799.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors [Evidence IEA]
COORDINATES: protein motif:HMM:NF019322.2
COORDINATES: protein motif:HMM:NF018513.2
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF016200.2
COORDINATES: protein motif:HMM:NF015445.2
TRAP transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013109.2
GO:0015103 - inorganic anion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011812634.1
aconitase X catalytic domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009604345.1
COORDINATES: similar to AA sequence:RefSeq:WP_012050022.1
GO:0004474 - malate synthase activity [Evidence IEA]
GO:0006097 - glyoxylate cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007814131.1
COORDINATES: similar to AA sequence:RefSeq:WP_007118645.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
FAD-linked oxidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011049162.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009806649.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010400160.1
GO:0003987 - acetate-CoA ligase activity [Evidence IEA]
GO:0019427 - acetyl-CoA biosynthetic process from acetate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_052642793.1
IS5-like element ISRsp13 family transposase
COORDINATES: protein motif:HMM:NF012624.2
COORDINATES: similar to AA sequence:RefSeq:WP_019996796.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_015500679.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611960.1
COORDINATES: similar to AA sequence:RefSeq:WP_011424135.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: nucleotide motif:Rfam:14.4:RF01497
AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF033542.1
COORDINATES: similar to AA sequence:RefSeq:WP_011747348.1
COORDINATES: similar to AA sequence:RefSeq:WP_009574176.1
COORDINATES: similar to AA sequence:RefSeq:WP_009574175.1
COORDINATES: similar to AA sequence:RefSeq:WP_007803318.1
COORDINATES: similar to AA sequence:RefSeq:WP_008336066.1
plasmid mobilization relaxosome protein MobC
COORDINATES: similar to AA sequence:RefSeq:WP_007803321.1
relaxase/mobilization nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005859685.1
COORDINATES: protein motif:HMM:NF024886.2
GO:0015074 - DNA integration [Evidence IEA]
phage integrase N-terminal SAM-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_076612253.1
COORDINATES: similar to AA sequence:RefSeq:WP_018700535.1
COORDINATES: similar to AA sequence:RefSeq:WP_019702276.1
COORDINATES: similar to AA sequence:RefSeq:WP_018718020.1
GO:0050661 - NADP binding [Evidence IEA]
NAD(P)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009604004.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009816755.1
GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013542217.1
COORDINATES: similar to AA sequence:RefSeq:WP_007798754.1
putative sulfate exporter family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_007814174.1
GO:0016836 - hydro-lyase activity [Evidence IEA]
fumarate hydratase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011457084.1
COORDINATES: similar to AA sequence:RefSeq:WP_009452737.1
COORDINATES: similar to AA sequence:RefSeq:WP_011339082.1
GO:0045282 - plasma membrane succinate dehydrogenase complex [Evidence IEA]
GO:0000104 - succinate dehydrogenase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
succinate dehydrogenase, cytochrome b556 subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009814472.1
COORDINATES: similar to AA sequence:RefSeq:WP_009452734.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009574169.1
COORDINATES: similar to AA sequence:RefSeq:WP_009574168.1
COORDINATES: similar to AA sequence:RefSeq:WP_009574167.1
COORDINATES: similar to AA sequence:RefSeq:WP_008336084.1
COORDINATES: similar to AA sequence:RefSeq:WP_009574160.1
TrbG/VirB9 family P-type conjugative transfer protein
COORDINATES: similar to AA sequence:RefSeq:WP_010139194.1
COORDINATES: similar to AA sequence:RefSeq:WP_010139195.1
COORDINATES: similar to AA sequence:RefSeq:WP_005859624.1
COORDINATES: similar to AA sequence:RefSeq:WP_005859623.1
COORDINATES: similar to AA sequence:RefSeq:WP_005859622.1
COORDINATES: similar to AA sequence:RefSeq:WP_008327373.1
COORDINATES: similar to AA sequence:RefSeq:WP_010138154.1
COORDINATES: similar to AA sequence:RefSeq:WP_005859617.1
COORDINATES: similar to AA sequence:RefSeq:WP_010138156.1
COORDINATES: similar to AA sequence:RefSeq:WP_008336094.1
COORDINATES: similar to AA sequence:RefSeq:WP_008336095.1
GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_018001728.1
GO:0051983 - regulation of chromosome segregation [Evidence IEA]
type II toxin-antitoxin system ParD family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_010398642.1
COORDINATES: similar to AA sequence:RefSeq:WP_008336115.1
COORDINATES: protein motif:HMM:NF024676.2
COORDINATES: similar to AA sequence:RefSeq:WP_018010707.1
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: protein motif:HMM:NF012234.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013593.2
COORDINATES: similar to AA sequence:RefSeq:WP_006954973.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611329.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_086558208.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076611992.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076611153.1
COORDINATES: similar to AA sequence:RefSeq:WP_008127127.1
COORDINATES: similar to AA sequence:RefSeq:WP_018859808.1
COORDINATES: similar to AA sequence:RefSeq:WP_012560106.1
COORDINATES: similar to AA sequence:RefSeq:WP_003523563.1