Sphingomonas sanxanigenens DSM 19645 = NX02 plasmid pNXO2, complete sequence.
Sphingomonas sanxanigenens DSM 19645 = NX02
Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.
Plasmid of Sphingomonas sanxanigenens NX02
Submitted (13-MAY-2015) College of Agronomy and Resources & Environment, Tianjin Agricultural University, No.22 Jinjing Road, Tianjin, Tianjin 300384, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP011450.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SOAPdenovo v. 1.05\nGenome Coverage :: 8.67x; 186.25x; 251.3x\nSequencing Technology :: PacBio; Illumina PE 300; Illumina MP 3000\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/03/2023 03:59:36\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,255\nCDSs (total) :: 6,186\nGenes (coding) :: 6,091\nCDSs (with protein) :: 6,091\nGenes (RNA) :: 69\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 57\nncRNAs :: 3\nPseudo Genes (total) :: 95\nCDSs (without protein) :: 95\nPseudo Genes (ambiguous residues) :: 0 of 95\nPseudo Genes (frameshifted) :: 27 of 95\nPseudo Genes (incomplete) :: 74 of 95\nPseudo Genes (internal stop) :: 11 of 95\nPseudo Genes (multiple problems) :: 15 of 95\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Sphingomonas sanxanigenens
COORDINATES: ab initio prediction:GeneMarkS-2+
GO:0003824 - catalytic activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
phosphoadenosine phosphosulfate reductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013041581.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013040147.1
COORDINATES: similar to AA sequence:RefSeq:WP_019054422.1
COORDINATES: similar to AA sequence:RefSeq:WP_010124614.1
COORDINATES: similar to AA sequence:RefSeq:WP_008829640.1
COORDINATES: similar to AA sequence:RefSeq:WP_010339722.1
COORDINATES: similar to AA sequence:RefSeq:WP_011950505.1
COORDINATES: similar to AA sequence:RefSeq:WP_011950502.1
COORDINATES: similar to AA sequence:RefSeq:WP_011950504.1
COORDINATES: similar to AA sequence:RefSeq:WP_010187856.1
COORDINATES: similar to AA sequence:RefSeq:WP_010339725.1
COORDINATES: similar to AA sequence:RefSeq:WP_010405790.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007015549.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: protein motif:HMM:NF014825.2
COORDINATES: similar to AA sequence:RefSeq:WP_008829869.1
COORDINATES: similar to AA sequence:RefSeq:WP_010339732.1
COORDINATES: similar to AA sequence:RefSeq:WP_010405783.1
COORDINATES: similar to AA sequence:RefSeq:WP_015460600.1
COORDINATES: similar to AA sequence:RefSeq:WP_010405780.1
COORDINATES: similar to AA sequence:RefSeq:WP_008829877.1
COORDINATES: similar to AA sequence:RefSeq:WP_011950430.1
type IV secretion system DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019054787.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611472.1
GO:0004803 - transposase activity [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076611552.1
COORDINATES: similar to AA sequence:RefSeq:WP_011982925.1
COORDINATES: similar to AA sequence:RefSeq:WP_010339452.1
COORDINATES: similar to AA sequence:RefSeq:WP_010339451.1
COORDINATES: similar to AA sequence:RefSeq:WP_010165429.1
COORDINATES: protein motif:HMM:NF022391.2
COORDINATES: similar to AA sequence:RefSeq:WP_019831499.1
GO:0004802 - transketolase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011253226.1
bifunctional transaldolase/phosoglucose isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_010404824.1
GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
decarboxylating 6-phosphogluconate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_004679800.1
GO:0004345 - glucose-6-phosphate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010185723.1
GO:0004619 - phosphoglycerate mutase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
2,3-diphosphoglycerate-dependent phosphoglycerate mutase
COORDINATES: protein motif:HMM:NF027219.2
COORDINATES: protein motif:HMM:NF016674.2
GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011540697.1
COORDINATES: similar to AA sequence:RefSeq:WP_014076995.1
COORDINATES: similar to AA sequence:RefSeq:WP_010403887.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406283.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007406228.1
GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_007406278.1
COORDINATES: similar to AA sequence:RefSeq:WP_003041865.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406296.1
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007406245.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013232610.1
COORDINATES: similar to AA sequence:RefSeq:WP_006023631.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007406275.1
DnaJ C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004212666.1
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010339438.1
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010339439.1
GO:0008199 - ferric iron binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010339440.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406291.1
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007406284.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007406240.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406230.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406248.1
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
GO:0006662 - glycerol ether metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007406254.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010544795.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0006950 - response to stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010339448.1
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
GO:0019867 - outer membrane [Evidence IEA]
glycine zipper 2TM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010339449.1
COORDINATES: similar to AA sequence:RefSeq:WP_019831898.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406281.1
COORDINATES: similar to AA sequence:RefSeq:WP_010339455.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406290.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF012257.2
GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007406251.1
COORDINATES: similar to AA sequence:RefSeq:WP_010339459.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406280.1
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011583194.1
GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007406609.1
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]; GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
YbaL family putative K(+) efflux transporter
COORDINATES: protein motif:HMM:NF013188.2
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_043766072.1
COORDINATES: similar to AA sequence:RefSeq:WP_011608154.1
COORDINATES: similar to AA sequence:RefSeq:WP_009491057.1
COORDINATES: similar to AA sequence:RefSeq:WP_010594887.1
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007406577.1
COORDINATES: similar to AA sequence:RefSeq:WP_013041396.1
COORDINATES: similar to AA sequence:RefSeq:WP_010339469.1
COORDINATES: similar to AA sequence:RefSeq:WP_020818487.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007406594.1
PAS domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_007679804.1
COORDINATES: similar to AA sequence:RefSeq:WP_019918243.1
GO:0051983 - regulation of chromosome segregation [Evidence IEA]
type II toxin-antitoxin system ParD family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_007406611.1
GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_010545264.1
COORDINATES: similar to AA sequence:RefSeq:WP_007015600.1
conjugal transfer protein TraG N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007406607.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406581.1
COORDINATES: similar to AA sequence:RefSeq:WP_010339772.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406595.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406612.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406615.1
type-F conjugative transfer system pilin assembly protein TrbC
COORDINATES: similar to AA sequence:RefSeq:WP_007406589.1
conjugal transfer pilus assembly protein TraU
COORDINATES: similar to AA sequence:RefSeq:WP_007406606.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406603.1
type-F conjugative transfer system protein TraW
COORDINATES: similar to AA sequence:RefSeq:WP_008828788.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406602.1
type-F conjugative transfer system protein TrbI
COORDINATES: similar to AA sequence:RefSeq:WP_007406604.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406613.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406578.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406579.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406582.1
COORDINATES: similar to AA sequence:RefSeq:WP_010339786.1
type-F conjugative transfer system secretin TraK
COORDINATES: similar to AA sequence:RefSeq:WP_011950625.1
type IV conjugative transfer system protein TraE
COORDINATES: similar to AA sequence:RefSeq:WP_015460523.1
type IV conjugative transfer system protein TraL
COORDINATES: similar to AA sequence:RefSeq:WP_010339789.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406703.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406725.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406719.1
GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007406700.1
COORDINATES: similar to AA sequence:RefSeq:WP_008832021.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406723.1
COORDINATES: similar to AA sequence:RefSeq:WP_020303743.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008813514.1
GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012318.2
trypsin-like peptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013894349.1
COORDINATES: protein motif:HMM:NF016232.2
COORDINATES: similar to AA sequence:RefSeq:WP_007406702.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406724.1
GO:0003953 - NAD+ nucleosidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0007165 - signal transduction [Evidence IEA]
toll/interleukin-1 receptor domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007406699.1
COORDINATES: similar to AA sequence:RefSeq:WP_010339793.1
COORDINATES: similar to AA sequence:RefSeq:WP_010339794.1
COORDINATES: similar to AA sequence:RefSeq:WP_010405516.1
COORDINATES: similar to AA sequence:RefSeq:WP_013039077.1
GO:0008168 - methyltransferase activity [Evidence IEA]
isoprenylcysteine carboxylmethyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013039078.1
COORDINATES: similar to AA sequence:RefSeq:WP_004212750.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013849922.1
COORDINATES: similar to AA sequence:RefSeq:WP_017503370.1
COORDINATES: similar to AA sequence:RefSeq:WP_020818484.1
COORDINATES: similar to AA sequence:RefSeq:WP_008828317.1
COORDINATES: similar to AA sequence:RefSeq:WP_008833438.1
COORDINATES: similar to AA sequence:RefSeq:WP_011542732.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004212744.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006878 - cellular copper ion homeostasis [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
Cu(I)-responsive transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004212743.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010336582.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406374.1
GO:0006825 - copper ion transport [Evidence IEA]
copper homeostasis membrane protein CopD
COORDINATES: similar to AA sequence:RefSeq:WP_004212741.1
GO:0042597 - periplasmic space [Evidence IEA]
GO:0005507 - copper ion binding [Evidence IEA]
copper homeostasis periplasmic binding protein CopC
COORDINATES: similar to AA sequence:RefSeq:WP_007683370.1
COORDINATES: similar to AA sequence:RefSeq:WP_015449249.1
COORDINATES: similar to AA sequence:RefSeq:WP_007683367.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013039089.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0005375 - copper ion transmembrane transporter activity [Evidence IEA]
copper resistance system multicopper oxidase
COORDINATES: similar to AA sequence:RefSeq:WP_007683363.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0006878 - cellular copper ion homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007683361.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406406.1
COORDINATES: similar to AA sequence:RefSeq:WP_020820519.1
COORDINATES: similar to AA sequence:RefSeq:WP_013039094.1
COORDINATES: protein motif:HMM:NF013694.2
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016743853.1
COORDINATES: similar to AA sequence:RefSeq:WP_017501299.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016743854.1
COORDINATES: similar to AA sequence:RefSeq:WP_015449259.1
COORDINATES: similar to AA sequence:RefSeq:WP_004213138.1
COORDINATES: similar to AA sequence:RefSeq:WP_004213137.1
COORDINATES: similar to AA sequence:RefSeq:WP_004213136.1
COORDINATES: similar to AA sequence:RefSeq:WP_017501296.1
COORDINATES: similar to AA sequence:RefSeq:WP_007683345.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016743858.1
COORDINATES: similar to AA sequence:RefSeq:WP_004212677.1
COORDINATES: similar to AA sequence:RefSeq:WP_007683342.1
COORDINATES: similar to AA sequence:RefSeq:WP_017501291.1
COORDINATES: similar to AA sequence:RefSeq:WP_004212674.1
COORDINATES: similar to AA sequence:RefSeq:WP_015449265.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406388.1
COORDINATES: similar to AA sequence:RefSeq:WP_016743863.1
COORDINATES: similar to AA sequence:RefSeq:WP_015449267.1
four-helix bundle copper-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007406411.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406380.1
COORDINATES: similar to AA sequence:RefSeq:WP_009824015.1
COORDINATES: similar to AA sequence:RefSeq:WP_009824016.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007406382.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406426.1
COORDINATES: similar to AA sequence:RefSeq:WP_004212654.1
heavy metal-responsive transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004212653.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406428.1
COORDINATES: similar to AA sequence:RefSeq:WP_013039107.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007406384.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007406408.1
COORDINATES: similar to AA sequence:RefSeq:WP_007683329.1
COORDINATES: similar to AA sequence:RefSeq:WP_013039108.1
COORDINATES: similar to AA sequence:RefSeq:WP_004212862.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611716.1
COORDINATES: similar to AA sequence:RefSeq:WP_011252867.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020750594.1
COORDINATES: similar to AA sequence:RefSeq:WP_003164981.1
COORDINATES: similar to AA sequence:RefSeq:WP_014077338.1
GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016744735.1
COORDINATES: similar to AA sequence:RefSeq:WP_007407007.1
GO:0046872 - metal ion binding [Evidence IEA]
heavy-metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017183478.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018632746.1
COORDINATES: similar to AA sequence:RefSeq:WP_019054844.1
COORDINATES: similar to AA sequence:RefSeq:WP_011749831.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_019833520.1
COORDINATES: protein motif:HMM:NF024975.2
COORDINATES: similar to AA sequence:RefSeq:WP_010219223.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010124320.1
COORDINATES: protein motif:HMM:NF014430.2
COORDINATES: similar to AA sequence:RefSeq:WP_017978495.1
COORDINATES: similar to AA sequence:RefSeq:WP_003040251.1
GO:0005267 - potassium channel activity [Evidence IEA]
GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003610091.1
GO:0008776 - acetate kinase activity [Evidence IEA]
GO:0006083 - acetate metabolic process [Evidence IEA]; GO:0006113 - fermentation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011439925.1
bifunctional enoyl-CoA hydratase/phosphate acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010126949.1
COORDINATES: protein motif:HMM:NF019542.2
COORDINATES: similar to AA sequence:RefSeq:WP_010408731.1
COORDINATES: similar to AA sequence:RefSeq:WP_010404830.1
COORDINATES: similar to AA sequence:RefSeq:WP_010405625.1
COORDINATES: similar to AA sequence:RefSeq:WP_007686678.1
COORDINATES: similar to AA sequence:RefSeq:WP_017977636.1
COORDINATES: similar to AA sequence:RefSeq:WP_010403174.1
COORDINATES: similar to AA sequence:RefSeq:WP_010165227.1
COORDINATES: similar to AA sequence:RefSeq:WP_014501181.1
GO:0017057 - 6-phosphogluconolactonase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010405599.1
COORDINATES: similar to AA sequence:RefSeq:WP_010164736.1
COORDINATES: similar to AA sequence:RefSeq:WP_010405614.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0050151 - oleate hydratase activity [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007607118.1
COORDINATES: similar to AA sequence:RefSeq:WP_010405637.1
COORDINATES: similar to AA sequence:RefSeq:WP_010405631.1
COORDINATES: similar to AA sequence:RefSeq:WP_012752651.1
COORDINATES: similar to AA sequence:RefSeq:WP_006871201.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006465529.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_003224796.1
COORDINATES: similar to AA sequence:RefSeq:WP_004566517.1
COORDINATES: protein motif:HMM:NF017119.2
COORDINATES: similar to AA sequence:RefSeq:WP_011615438.1
COORDINATES: similar to AA sequence:RefSeq:WP_011505175.1
COORDINATES: similar to AA sequence:RefSeq:WP_020817929.1
COORDINATES: similar to AA sequence:RefSeq:WP_017183759.1
COORDINATES: similar to AA sequence:RefSeq:WP_007407191.1
COORDINATES: similar to AA sequence:RefSeq:WP_011542737.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612078.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: nucleotide motif:Rfam:14.4:RF01497
AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF024880.2
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007684070.1
COORDINATES: similar to AA sequence:RefSeq:WP_019706040.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007679611.1
COORDINATES: similar to AA sequence:RefSeq:WP_010338848.1
flagellar hook-basal body complex protein FliE
COORDINATES: protein motif:HMM:NF024865.2
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002440293.1
GO:0019152 - acetoin dehydrogenase activity [Evidence IEA]
GO:0045150 - acetoin catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012650610.1
COORDINATES: similar to AA sequence:RefSeq:WP_010567307.1
COORDINATES: similar to AA sequence:RefSeq:WP_008995980.1
NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_007407000.1
COORDINATES: similar to AA sequence:RefSeq:WP_004212957.1
COORDINATES: similar to AA sequence:RefSeq:WP_007407009.1
COORDINATES: similar to AA sequence:RefSeq:WP_007407006.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018251207.1
COORDINATES: similar to AA sequence:RefSeq:WP_009028919.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406998.1
COORDINATES: similar to AA sequence:RefSeq:WP_004212951.1
COORDINATES: similar to AA sequence:RefSeq:WP_007407018.1
COORDINATES: similar to AA sequence:RefSeq:WP_004212947.1
COORDINATES: similar to AA sequence:RefSeq:WP_004212945.1
COORDINATES: similar to AA sequence:RefSeq:WP_007407015.1
COORDINATES: similar to AA sequence:RefSeq:WP_010128031.1
COORDINATES: similar to AA sequence:RefSeq:WP_004212938.1
GO:0015343 - siderophore-iron transmembrane transporter activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014414412.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007406231.1
COORDINATES: similar to AA sequence:RefSeq:WP_003515190.1
COORDINATES: similar to AA sequence:RefSeq:WP_006421375.1
COORDINATES: similar to AA sequence:RefSeq:WP_012520537.1
COORDINATES: similar to AA sequence:RefSeq:WP_020817759.1
COORDINATES: similar to AA sequence:RefSeq:WP_004213364.1
COORDINATES: similar to AA sequence:RefSeq:WP_010165326.1
COORDINATES: similar to AA sequence:RefSeq:WP_010165023.1
COORDINATES: similar to AA sequence:RefSeq:WP_009209116.1
COORDINATES: similar to AA sequence:RefSeq:WP_007686149.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612398.1
COORDINATES: similar to AA sequence:RefSeq:WP_007816659.1
COORDINATES: similar to AA sequence:RefSeq:WP_019368198.1
COORDINATES: similar to AA sequence:RefSeq:WP_004212886.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0015662 - P-type ion transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004212885.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004212882.1
COORDINATES: similar to AA sequence:RefSeq:WP_017183574.1
COORDINATES: similar to AA sequence:RefSeq:WP_004212880.1
COORDINATES: similar to AA sequence:RefSeq:WP_020820506.1
COORDINATES: similar to AA sequence:RefSeq:WP_018251219.1
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
CusA/CzcA family heavy metal efflux RND transporter
COORDINATES: similar to AA sequence:RefSeq:WP_004212877.1
COORDINATES: similar to AA sequence:RefSeq:WP_013039111.1
COORDINATES: similar to AA sequence:RefSeq:WP_017980802.1
COORDINATES: similar to AA sequence:RefSeq:WP_017183571.1
COORDINATES: similar to AA sequence:RefSeq:WP_004212870.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406847.1
COORDINATES: similar to AA sequence:RefSeq:WP_013039112.1
COORDINATES: similar to AA sequence:RefSeq:WP_004212865.1
COORDINATES: similar to AA sequence:RefSeq:WP_004212864.1
Mu transposase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009824028.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406383.1
COORDINATES: similar to AA sequence:RefSeq:WP_007406709.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_007688084.1
COORDINATES: similar to AA sequence:RefSeq:WP_017183650.1
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]
RepB family plasmid replication initiator protein
COORDINATES: similar to AA sequence:RefSeq:WP_020486660.1
COORDINATES: similar to AA sequence:RefSeq:WP_010187501.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009820518.1
COORDINATES: similar to AA sequence:RefSeq:WP_013080232.1
GO:0030246 - carbohydrate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010187496.1
COORDINATES: similar to AA sequence:RefSeq:WP_007707718.1
COORDINATES: protein motif:HMM:NF024098.2
COORDINATES: similar to AA sequence:RefSeq:WP_014076969.1
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010687628.1
COORDINATES: similar to AA sequence:RefSeq:WP_007682376.1
COORDINATES: similar to AA sequence:RefSeq:WP_011578838.1
COORDINATES: similar to AA sequence:RefSeq:WP_007015476.1
COORDINATES: similar to AA sequence:RefSeq:WP_006949344.1
COORDINATES: similar to AA sequence:RefSeq:WP_011057003.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
group II intron reverse transcriptase/maturase
COORDINATES: similar to AA sequence:RefSeq:WP_006953701.1
strawberry notch C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014273.2
COORDINATES: similar to AA sequence:RefSeq:WP_007015483.1
zincin-like metallopeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010124620.1
COORDINATES: similar to AA sequence:RefSeq:WP_010405806.1
COORDINATES: protein motif:HMM:NF022642.2
COORDINATES: similar to AA sequence:RefSeq:WP_020819414.1
COORDINATES: similar to AA sequence:RefSeq:WP_010124617.1
COORDINATES: similar to AA sequence:RefSeq:WP_007688070.1
GO:0003674 - molecular_function [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016744714.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011542686.1
GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence IEA]
This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite, after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell, providing resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013166400.1
GO:0030612 - arsenate reductase (thioredoxin) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012048460.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_017183288.1
COORDINATES: similar to AA sequence:RefSeq:WP_020819455.1
COORDINATES: similar to AA sequence:RefSeq:WP_020819456.1
COORDINATES: similar to AA sequence:RefSeq:WP_011950466.1
COORDINATES: similar to AA sequence:RefSeq:WP_010339708.1
COORDINATES: similar to AA sequence:RefSeq:WP_013846912.1
COORDINATES: similar to AA sequence:RefSeq:WP_019054428.1
COORDINATES: similar to AA sequence:RefSeq:WP_013846910.1
COORDINATES: similar to AA sequence:RefSeq:WP_010339712.1
COORDINATES: similar to AA sequence:RefSeq:WP_013846908.1
COORDINATES: similar to AA sequence:RefSeq:WP_017183274.1
COORDINATES: similar to AA sequence:RefSeq:WP_011950517.1