Prevotella intermedia ATCC 25611 = DSM 20706 strain ATCC 25611 chromosome II, complete sequence.
Prevotella intermedia ATCC 25611 = DSM 20706
Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.
Heterogeneous Restriction-Modification and CRISPR-Cas Mediated Barriers to Exogenous DNA Defined by Single Molecule Real-time (SMRT) Genome and Methylome Sequencing of Prevotella intermedia ATCC 25611 and Strain 17
Submitted (17-JAN-2017) Immunology and Infectious disease, The Forsyth Institute, 245 First Street, Cambridge, MA 02142, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP019301.1.\nBacteria and source DNA available from Christopher D Johnston.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Celera Assembler v. June 2016; HGAP v.\n 2.3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 200.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/05/2022 16:10:40\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 2,244\nCDSs (total) :: 2,175\nGenes (coding) :: 2,114\nCDSs (with protein) :: 2,114\nGenes (RNA) :: 69\nrRNAs :: 5, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 4, 4 (5S, 16S, 23S)\ntRNAs :: 53\nncRNAs :: 3\nPseudo Genes (total) :: 61\nCDSs (without protein) :: 61\nPseudo Genes (ambiguous residues) :: 0 of 61\nPseudo Genes (frameshifted) :: 33 of 61\nPseudo Genes (incomplete) :: 34 of 61\nPseudo Genes (internal stop) :: 8 of 61\nPseudo Genes (multiple problems) :: 12 of 61\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_004361797.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004354373.1
TraR/DksA family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004367439.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025494.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_014708301.1
COORDINATES: similar to AA sequence:RefSeq:WP_009752276.1
relaxase/mobilization nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004359060.1
COORDINATES: similar to AA sequence:RefSeq:WP_013672064.1
COORDINATES: similar to AA sequence:RefSeq:WP_004342100.1
COORDINATES: similar to AA sequence:RefSeq:WP_004373326.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014708609.1
GO:0004803 - transposase activity [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014709759.1
COORDINATES: similar to AA sequence:RefSeq:WP_004342103.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004342104.1
COORDINATES: similar to AA sequence:RefSeq:WP_006256640.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006256641.1
COORDINATES: similar to AA sequence:RefSeq:WP_005846726.1
COORDINATES: similar to AA sequence:RefSeq:WP_009348157.1
COORDINATES: similar to AA sequence:RefSeq:WP_004342109.1
outer membrane lipoprotein-sorting protein
COORDINATES: similar to AA sequence:RefSeq:WP_014709752.1
COORDINATES: similar to AA sequence:RefSeq:WP_004354667.1
COORDINATES: similar to AA sequence:RefSeq:WP_004373349.1
COORDINATES: similar to AA sequence:RefSeq:WP_018911044.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708344.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708452.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_004365863.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046028.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013671289.1
GO:0004527 - exonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014708653.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: similar to AA sequence:RefSeq:WP_004365867.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363200.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004363201.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_007412261.1
COORDINATES: similar to AA sequence:RefSeq:WP_014710021.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708343.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708342.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708394.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708341.1
COORDINATES: similar to AA sequence:RefSeq:WP_006950019.1
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_006950021.1
COORDINATES: similar to AA sequence:RefSeq:WP_006950025.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046316.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364468.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046344.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708333.1
COORDINATES: similar to AA sequence:RefSeq:WP_018909705.1
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006046348.1
NADH-quinone oxidoreductase subunit NuoH
COORDINATES: similar to AA sequence:RefSeq:WP_007133979.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367471.1
COORDINATES: similar to AA sequence:RefSeq:WP_006952888.1
GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoK
COORDINATES: similar to AA sequence:RefSeq:WP_004353537.1
COORDINATES: similar to AA sequence:RefSeq:WP_004353543.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361850.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361852.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708717.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708720.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361791.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708303.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367438.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046342.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361821.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367458.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708312.1
COORDINATES: similar to AA sequence:RefSeq:WP_009860530.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361805.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708315.1
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014708316.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0052693 - epoxyqueuosine reductase activity [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004367554.1
choice-of-anchor J domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004367555.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367429.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708317.1
GO:0008234 - cysteine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006253923.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046211.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367753.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361815.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
prolyl oligopeptidase family serine peptidase
COORDINATES: similar to AA sequence:RefSeq:WP_014708367.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004367858.1
COORDINATES: similar to AA sequence:RefSeq:WP_004362868.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367856.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045960.1
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004354715.1
GO:0004068 - aspartate 1-decarboxylase activity [Evidence IEA]
GO:0006523 - alanine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004362864.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708374.1
COORDINATES: similar to AA sequence:RefSeq:WP_009010445.1
COORDINATES: similar to AA sequence:RefSeq:WP_005843320.1
leucine-rich repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006045920.1
four helix bundle suffix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018910164.1
bifunctional methionine sulfoxide reductase B/A protein
COORDINATES: similar to AA sequence:RefSeq:WP_014708393.1
COORDINATES: similar to AA sequence:RefSeq:WP_014709006.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361831.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708397.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045871.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367404.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708400.1
COORDINATES: similar to AA sequence:RefSeq:WP_004348173.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014708401.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708405.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004367557.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014708407.1
GO:0016812 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007368236.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708409.1
COORDINATES: similar to AA sequence:RefSeq:WP_009434853.1
septum formation initiator family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004382522.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009010657.1
COORDINATES: similar to AA sequence:RefSeq:WP_004355391.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361955.1
COORDINATES: similar to AA sequence:RefSeq:WP_009010660.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708420.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367573.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045946.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708423.1
COORDINATES: similar to AA sequence:RefSeq:WP_004354540.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_004364688.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045951.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004359 - glutaminase activity [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004364691.1
COORDINATES: similar to AA sequence:RefSeq:WP_014710243.1
COORDINATES: similar to AA sequence:RefSeq:WP_014709270.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265538.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708434.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363072.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0015969 - guanosine tetraphosphate metabolic process [Evidence IEA]; GO:0015968 - stringent response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014708436.1
COORDINATES: similar to AA sequence:RefSeq:WP_004320828.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708438.1
T9SS type A sorting domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014708440.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708441.1
type VI-B CRISPR-associated RNA-guided ribonuclease Cas13b
COORDINATES: similar to AA sequence:RefSeq:WP_014708443.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367580.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: similar to AA sequence:RefSeq:WP_018910178.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004365153.1
COORDINATES: similar to AA sequence:RefSeq:WP_008124756.1
COORDINATES: similar to AA sequence:RefSeq:WP_008124758.1
COORDINATES: similar to AA sequence:RefSeq:WP_004374787.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367378.1
COORDINATES: protein motif:HMM:NF025651.2
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014581.2
TraM recognition domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009013095.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: protein motif:HMM:NF013753.2
COORDINATES: similar to AA sequence:RefSeq:WP_008157816.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004362860.1
COORDINATES: similar to AA sequence:RefSeq:WP_004381900.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018463568.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014708380.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708381.1
COORDINATES: similar to AA sequence:RefSeq:WP_004362854.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045968.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363797.1
GO:0047761 - butyrate kinase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014708386.1
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014708454.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008822555.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004364272.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708457.1
COORDINATES: similar to AA sequence:RefSeq:WP_006044859.1
COORDINATES: similar to AA sequence:RefSeq:WP_006044858.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708460.1
GO:0015291 - secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014708461.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708462.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004363933.1
SurA N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006951876.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363940.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015920 - lipopolysaccharide transport [Evidence IEA]
LPS export ABC transporter periplasmic protein LptC
COORDINATES: similar to AA sequence:RefSeq:WP_004365737.1
COORDINATES: similar to AA sequence:RefSeq:WP_004365739.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708472.1
COORDINATES: similar to AA sequence:RefSeq:WP_006044949.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: protein motif:HMM:NF018425.2
COORDINATES: similar to AA sequence:RefSeq:WP_014708474.1
GO:0019867 - outer membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004367546.1
translocation/assembly module TamB domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004358275.1
COORDINATES: protein motif:HMM:NF014177.2
GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0032775 - DNA methylation on adenine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014708477.1
COORDINATES: similar to AA sequence:RefSeq:WP_007366321.1
COORDINATES: similar to AA sequence:RefSeq:WP_012573149.1
COORDINATES: similar to AA sequence:RefSeq:WP_004379430.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367741.1
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: similar to AA sequence:RefSeq:WP_008822530.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004364434.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363458.1
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008822550.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004363451.1
YihY/virulence factor BrkB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004364647.1
LolA-like putative outer membrane lipoprotein chaperone
COORDINATES: similar to AA sequence:RefSeq:WP_004367795.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708488.1
COORDINATES: similar to AA sequence:RefSeq:WP_004359600.1
class I SAM-dependent rRNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014708490.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014708492.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046258.1
GO:0016021 - integral component of membrane [Evidence IEA]
GO:1903425 - fluoride transmembrane transporter activity [Evidence IEA]
GO:1903424 - fluoride transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014708493.1
carboxypeptidase regulatory-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014708495.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364415.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364416.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708498.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708569.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708500.1
COORDINATES: similar to AA sequence:RefSeq:WP_004362825.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708501.1
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014708502.1
COORDINATES: similar to AA sequence:RefSeq:WP_013671250.1
COORDINATES: similar to AA sequence:RefSeq:WP_004362829.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708506.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364160.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708509.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014708511.1
COORDINATES: similar to AA sequence:RefSeq:WP_004354557.1
COORDINATES: similar to AA sequence:RefSeq:WP_018910162.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708514.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004381866.1
COORDINATES: similar to AA sequence:RefSeq:WP_008566266.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004362823.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708520.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004363463.1
COORDINATES: similar to AA sequence:RefSeq:WP_004383577.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009010649.1
COORDINATES: similar to AA sequence:RefSeq:WP_004366050.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708526.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0008168 - methyltransferase activity [Evidence IEA]
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: similar to AA sequence:RefSeq:WP_006046001.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363550.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: similar to AA sequence:RefSeq:WP_004363552.1
COORDINATES: similar to AA sequence:RefSeq:WP_004366027.1
COORDINATES: similar to AA sequence:RefSeq:WP_004366026.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708532.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: similar to AA sequence:RefSeq:WP_014708533.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
signal recognition particle-docking protein FtsY
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004356863.1
COORDINATES: similar to AA sequence:RefSeq:WP_004348712.1
COORDINATES: similar to AA sequence:RefSeq:WP_007367235.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004348717.1
COORDINATES: similar to AA sequence:RefSeq:WP_006948119.1
COORDINATES: similar to AA sequence:RefSeq:WP_004359074.1
COORDINATES: similar to AA sequence:RefSeq:WP_008449754.1
COORDINATES: similar to AA sequence:RefSeq:WP_009752272.1
COORDINATES: similar to AA sequence:RefSeq:WP_004344881.1
COORDINATES: similar to AA sequence:RefSeq:WP_019969243.1
COORDINATES: similar to AA sequence:RefSeq:WP_009434670.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045578.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708535.1
GO:0008690 - 3-deoxy-manno-octulosonate cytidylyltransferase activity [Evidence IEA]
GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
3-deoxy-manno-octulosonate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004341819.1
COORDINATES: similar to AA sequence:RefSeq:WP_004355447.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367705.1
COORDINATES: similar to AA sequence:RefSeq:WP_004353483.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367706.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046310.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046311.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708544.1
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_006046289.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363490.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004363489.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363488.1
COORDINATES: similar to AA sequence:RefSeq:WP_009227493.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
3-oxoacyl-[acyl-carrier-protein] reductase
COORDINATES: similar to AA sequence:RefSeq:WP_014708550.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708551.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363481.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708553.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045973.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708555.1
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_006045976.1
COORDINATES: similar to AA sequence:RefSeq:WP_004362845.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361156.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361158.1
cytochrome d ubiquinol oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_014708560.1
COORDINATES: similar to AA sequence:RefSeq:WP_004362842.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708562.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708563.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045753.1
GO:0006364 - rRNA processing [Evidence IEA]
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: similar to AA sequence:RefSeq:WP_004364641.1
COORDINATES: similar to AA sequence:RefSeq:WP_007368622.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003941 - L-serine ammonia-lyase activity [Evidence IEA]
GO:0009063 - cellular amino acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004362257.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006046227.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046226.1
COORDINATES: similar to AA sequence:RefSeq:WP_004355445.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364755.1
COORDINATES: similar to AA sequence:RefSeq:WP_004359770.1
COORDINATES: similar to AA sequence:RefSeq:WP_004360392.1
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006046455.1
GO:0004040 - amidase activity [Evidence IEA]
glucosaminidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006046373.1
GO:0050097 - methylaspartate mutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014708672.1
methylaspartate mutase accessory protein GlmL
COORDINATES: similar to AA sequence:RefSeq:WP_004364139.1
GO:0019670 - anaerobic glutamate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006949924.1
GO:0050096 - methylaspartate ammonia-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004364143.1
acyclic terpene utilization AtuA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004364145.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367803.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046380.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014708679.1
GO:0016836 - hydro-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014708680.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046232.1
COORDINATES: similar to AA sequence:RefSeq:WP_004353964.1
nucleoside recognition domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014708683.1
COORDINATES: similar to AA sequence:RefSeq:WP_004382064.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004362443.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367411.1
COORDINATES: similar to AA sequence:RefSeq:WP_009435604.1
COORDINATES: protein motif:HMM:NF013382.2
COORDINATES: similar to AA sequence:RefSeq:WP_004381994.1
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]
GO:0006814 - sodium ion transport [Evidence IEA]
NADH:ubiquinone reductase (Na(+)-transporting) subunit F
COORDINATES: similar to AA sequence:RefSeq:WP_006045883.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit E
COORDINATES: similar to AA sequence:RefSeq:WP_007367090.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit D
COORDINATES: similar to AA sequence:RefSeq:WP_009434655.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit C
COORDINATES: similar to AA sequence:RefSeq:WP_006045880.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]
GO:0022904 - respiratory electron transport chain [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
NADH:ubiquinone reductase (Na(+)-transporting) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_014708356.1
Na(+)-translocating NADH-quinone reductase subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_004367463.1
COORDINATES: protein motif:HMM:NF013068.2
COORDINATES: similar to AA sequence:RefSeq:WP_004363533.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265676.1
COORDINATES: similar to AA sequence:RefSeq:WP_018909792.1
COORDINATES: similar to AA sequence:RefSeq:WP_007366672.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011984.1
COORDINATES: similar to AA sequence:RefSeq:WP_008121806.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
aspartate carbamoyltransferase regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004359461.1
COORDINATES: similar to AA sequence:RefSeq:WP_004352655.1
transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004363767.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_014708659.1
COORDINATES: protein motif:HMM:NF025019.2
COORDINATES: similar to AA sequence:RefSeq:WP_007573609.1
COORDINATES: similar to AA sequence:RefSeq:WP_018909851.1
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004359776.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_014708663.1
COORDINATES: similar to AA sequence:RefSeq:WP_004353445.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364639.1
carboxypeptidase-like regulatory domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004360160.1
COORDINATES: similar to AA sequence:RefSeq:WP_009434820.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004363537.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: similar to AA sequence:RefSeq:WP_004357364.1
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004337692.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708582.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004364420.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367756.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363495.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708588.1
COORDINATES: similar to AA sequence:RefSeq:WP_018911264.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004359174.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361878.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367494.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014708595.1
GO:0008658 - penicillin binding [Evidence IEA]
penicillin-binding transpeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014708596.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708597.1
anaerobic ribonucleoside-triphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_006046392.1
GO:0043364 - glycyl-radical enzyme activating activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_007575780.1
COORDINATES: similar to AA sequence:RefSeq:WP_008566079.1
COORDINATES: similar to AA sequence:RefSeq:WP_018709388.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011665.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045733.1
GO:0043365 - [formate-C-acetyltransferase]-activating enzyme activity [Evidence IEA]
pyruvate formate-lyase-activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_009012539.1
GO:0008861 - formate C-acetyltransferase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014708671.1
COORDINATES: similar to AA sequence:RefSeq:WP_009010752.1
COORDINATES: similar to AA sequence:RefSeq:WP_004357115.1
COORDINATES: similar to AA sequence:RefSeq:WP_014709943.1
GO:0003796 - lysozyme activity [Evidence IEA]
GO:0016998 - cell wall macromolecule catabolic process [Evidence IEA]; GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004362219.1
COORDINATES: similar to AA sequence:RefSeq:WP_004354318.1
COORDINATES: similar to AA sequence:RefSeq:WP_014709940.1
COORDINATES: similar to AA sequence:RefSeq:WP_014709938.1
GO:0004849 - uridine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004366072.1
COORDINATES: similar to AA sequence:RefSeq:WP_004358074.1
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004365770.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364225.1
COORDINATES: similar to AA sequence:RefSeq:WP_004365766.1
COORDINATES: similar to AA sequence:RefSeq:WP_018463660.1
COORDINATES: similar to AA sequence:RefSeq:WP_004353027.1
COORDINATES: similar to AA sequence:RefSeq:WP_004366060.1
COORDINATES: similar to AA sequence:RefSeq:WP_004362245.1
COORDINATES: similar to AA sequence:RefSeq:WP_014709930.1
COORDINATES: similar to AA sequence:RefSeq:WP_014709929.1
COORDINATES: similar to AA sequence:RefSeq:WP_014709928.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004594 - pantothenate kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004353167.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363406.1
GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014709925.1
COORDINATES: similar to AA sequence:RefSeq:WP_014709924.1
COORDINATES: similar to AA sequence:RefSeq:WP_004366273.1
COORDINATES: similar to AA sequence:RefSeq:WP_014298174.1
COORDINATES: similar to AA sequence:RefSeq:WP_004584361.1
COORDINATES: similar to AA sequence:RefSeq:WP_005847791.1
COORDINATES: similar to AA sequence:RefSeq:WP_004341685.1
COORDINATES: similar to AA sequence:RefSeq:WP_012457194.1
COORDINATES: similar to AA sequence:RefSeq:WP_004365303.1
COORDINATES: similar to AA sequence:RefSeq:WP_008564054.1
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004353752.1
COORDINATES: similar to AA sequence:RefSeq:WP_005841877.1
COORDINATES: similar to AA sequence:RefSeq:WP_006948373.1
COORDINATES: similar to AA sequence:RefSeq:WP_006256567.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005847767.1
COORDINATES: similar to AA sequence:RefSeq:WP_004346330.1
COORDINATES: similar to AA sequence:RefSeq:WP_018967473.1
COORDINATES: similar to AA sequence:RefSeq:WP_018362582.1
COORDINATES: similar to AA sequence:RefSeq:WP_009236096.1
COORDINATES: similar to AA sequence:RefSeq:WP_018362584.1
COORDINATES: similar to AA sequence:RefSeq:WP_018968335.1
COORDINATES: similar to AA sequence:RefSeq:WP_009434717.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265848.1
COORDINATES: similar to AA sequence:RefSeq:WP_004348188.1
COORDINATES: similar to AA sequence:RefSeq:WP_004318718.1
reverse transcriptase/maturase family protein
GO:0032991 - protein-containing complex [Evidence IEA]
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0032196 - transposition [Evidence IEA]
TraG family conjugative transposon ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_006256403.1
COORDINATES: similar to AA sequence:RefSeq:WP_004378854.1
COORDINATES: similar to AA sequence:RefSeq:WP_018968437.1
COORDINATES: similar to AA sequence:RefSeq:WP_004343298.1
COORDINATES: similar to AA sequence:RefSeq:WP_004351253.1
COORDINATES: similar to AA sequence:RefSeq:WP_006256588.1
COORDINATES: similar to AA sequence:RefSeq:WP_004365249.1
COORDINATES: similar to AA sequence:RefSeq:WP_013671957.1
COORDINATES: similar to AA sequence:RefSeq:WP_009229629.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367382.1
COORDINATES: similar to AA sequence:RefSeq:WP_004353784.1
COORDINATES: similar to AA sequence:RefSeq:WP_013671964.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
LuxR C-terminal-related transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004353640.1
COORDINATES: similar to AA sequence:RefSeq:WP_018968363.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004364409.1
COORDINATES: similar to AA sequence:RefSeq:WP_018028761.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364405.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_009012113.1
COORDINATES: similar to AA sequence:RefSeq:WP_004336186.1
COORDINATES: protein motif:HMM:NF015377.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
cysteine peptidase family C39 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004336184.1
COORDINATES: similar to AA sequence:RefSeq:WP_004339773.1
COORDINATES: similar to AA sequence:RefSeq:WP_009012106.1
peptidase domain-containing ABC transporter
COORDINATES: similar to AA sequence:RefSeq:WP_004355260.1
COORDINATES: similar to AA sequence:RefSeq:WP_004339792.1
COORDINATES: similar to AA sequence:RefSeq:WP_018362639.1
COORDINATES: similar to AA sequence:RefSeq:WP_004352932.1
COORDINATES: similar to AA sequence:RefSeq:WP_009228519.1
COORDINATES: similar to AA sequence:RefSeq:WP_007136021.1
COORDINATES: similar to AA sequence:RefSeq:WP_004377617.1
COORDINATES: similar to AA sequence:RefSeq:WP_004331551.1
COORDINATES: similar to AA sequence:RefSeq:WP_004349933.1
helicase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004352710.1
COORDINATES: similar to AA sequence:RefSeq:WP_004375824.1
COORDINATES: similar to AA sequence:RefSeq:WP_013671971.1
COORDINATES: similar to AA sequence:RefSeq:WP_008824296.1
COORDINATES: similar to AA sequence:RefSeq:WP_018109303.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004342127.1
COORDINATES: similar to AA sequence:RefSeq:WP_019968987.1
COORDINATES: similar to AA sequence:RefSeq:WP_004342129.1
COORDINATES: similar to AA sequence:RefSeq:WP_019968989.1
GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019968990.1
COORDINATES: similar to AA sequence:RefSeq:WP_004342132.1
COORDINATES: similar to AA sequence:RefSeq:WP_005785850.1
COORDINATES: similar to AA sequence:RefSeq:WP_005785852.1
COORDINATES: similar to AA sequence:RefSeq:WP_005646253.1
COORDINATES: similar to AA sequence:RefSeq:WP_004352487.1
COORDINATES: similar to AA sequence:RefSeq:WP_008824313.1
COORDINATES: similar to AA sequence:RefSeq:WP_005845937.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003896 - DNA primase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
CHC2 zinc finger domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004336065.1
plasmid mobilization relaxosome protein MobC
COORDINATES: similar to AA sequence:RefSeq:WP_009435689.1
COORDINATES: similar to AA sequence:RefSeq:WP_007410943.1
COORDINATES: similar to AA sequence:RefSeq:WP_008451403.1
metallophosphatase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008451404.1
COORDINATES: similar to AA sequence:RefSeq:WP_008451396.1
COORDINATES: similar to AA sequence:RefSeq:WP_007410907.1
PDDEXK nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004308773.1
COORDINATES: similar to AA sequence:RefSeq:WP_008823896.1
COORDINATES: similar to AA sequence:RefSeq:WP_004380969.1
COORDINATES: similar to AA sequence:RefSeq:WP_009227185.1
COORDINATES: similar to AA sequence:RefSeq:WP_004365016.1
COORDINATES: similar to AA sequence:RefSeq:WP_009227183.1
COORDINATES: similar to AA sequence:RefSeq:WP_004368091.1
COORDINATES: similar to AA sequence:RefSeq:WP_004368090.1
COORDINATES: protein motif:HMM:NF012492.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009011652.1
COORDINATES: similar to AA sequence:RefSeq:WP_013671939.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363499.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: similar to AA sequence:RefSeq:WP_014708325.1
COORDINATES: similar to AA sequence:RefSeq:WP_018964356.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708323.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361908.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045846.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708296.1
MotA/TolQ/ExbB proton channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006045848.1
COORDINATES: similar to AA sequence:RefSeq:WP_004362836.1
COORDINATES: similar to AA sequence:RefSeq:WP_004362835.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708291.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708747.1
COORDINATES: similar to AA sequence:RefSeq:WP_005860988.1
type II toxin-antitoxin system YafQ family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_013548127.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045769.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045768.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708741.1
COORDINATES: similar to AA sequence:RefSeq:WP_004357669.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708735.1
COORDINATES: similar to AA sequence:RefSeq:WP_006281918.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708733.1
HipA N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018464662.1
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: similar to AA sequence:RefSeq:WP_004364232.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708729.1
D-Ala-D-Ala carboxypeptidase family metallohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_014708728.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361917.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361920.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045743.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014708725.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018910656.1
COORDINATES: similar to AA sequence:RefSeq:WP_018910657.1
COORDINATES: similar to AA sequence:RefSeq:WP_007572124.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367683.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708288.1
COORDINATES: similar to AA sequence:RefSeq:WP_009122204.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363792.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708723.1
COORDINATES: protein motif:HMM:NF016051.2
COORDINATES: protein motif:HMM:NF027445.2
COORDINATES: protein motif:HMM:NF024867.2