Defluviicoccus vanus strain Ben 114 plasmid unnamed, complete sequence.
type: Entry
definition: Defluviicoccus vanus strain Ben 114 plasmid unnamed, complete sequence.
sequence version: NZ_CP053924.1
sequence date: 2022-10-12
sequence: sequence
division: CON
label: NZ_CP053924.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN15030566
keyword: RefSeq
source: Defluviicoccus vanus
organism: Defluviicoccus vanus
taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Defluviicoccus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP053924.1.\nBacteria and source DNA available from National Collection of\nIndustrial, Food and Marine Bacteria, Aberdeen, UK.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 24-JUL-2019\nAssembly Method :: Unicycler v. 0.4.7\nGenome Representation :: Full\nExpected Final Version :: No\nReference-guided Assembly :: align-xgenus: made from MEGAN-LR using\n NR\nGenome Coverage :: 100.0x\nSequencing Technology :: Oxford Nanopore MiniION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/12/2022 05:35:08\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 3,849\nCDSs (total) :: 3,792\nGenes (coding) :: 3,414\nCDSs (with protein) :: 3,414\nGenes (RNA) :: 57\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 4\nPseudo Genes (total) :: 378\nCDSs (without protein) :: 378\nPseudo Genes (ambiguous residues) :: 0 of 378\nPseudo Genes (frameshifted) :: 169 of 378\nPseudo Genes (incomplete) :: 239 of 378\nPseudo Genes (internal stop) :: 13 of 378\nPseudo Genes (multiple problems) :: 42 of 378\nCRISPR Arrays :: 4\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 70783
topology: circular
so has quality: SO_0000988
location: 1..70783
location: region:1-70783:1
RO_0002162: 111831

NZ_CP053924
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN15030566
type: BioSample
SIO_000068: biosample

1
title: Complete closed genome sequence of Defluviicoccus vanus
author: Bessarab, I.
author: Arumugam, K.
author: Maszenan, A.M.
author: Seviour, R.J.
author: Williams, R.B.
journal: Unpublished

2
title: Direct Submission
author: Bessarab, I.
author: Arumugam, K.
author: Maszenan, A.M.
author: Seviour, R.J.
author: Williams, R.B.
journal: Submitted (27-MAY-2020) Integrative Analysis Unit, Singapore Centre for Environmental Life Sciences Engineering, 28 Medical Drive, Singapore 117456, Singapore

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70783:1
position: 70783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-70783:1:source
so part of: sequence
organism: Defluviicoccus vanus
mol type: genomic DNA
strain: Ben 114
isolation source: NCIMB
type material: type strain of Defluviicoccus vanus
plasmid: unnamed
country: Singapore: Jurong West
collection date: 2019-06-19

111831
type: Taxonomy
SIO_000068: taxonomy

HQ394_RS18935
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS18935
old locus tag: HQ394_19090
so part of: sequence
location: complement(join(70326..70783,1..13))
location: region:1-70783:-1
so has part: feature:1-13:-1:exon
so has part: feature:70326-70783:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70783:-1
position: 70783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-13:-1:exon

position:13:-1
position: 13
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:70326-70783:-1:exon

position:70326:-1
position: 70326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HQ394_RS18935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS18935
old locus tag: HQ394_19090
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: FixH family protein
translation: MSDYTSLVVKRRFLLASIVVIGLAGVVSACASNESRDRYRFDVVNQPVPVGAHSTITVRLTDATTGRPVDGATISDARLTMTMPSTIPPGKVIWPDRSHSDEVRFVGSSGDGQYRLAGDVSMPGTWTLVLSASVPGEASPVEGSTRFVAARERSDP
SIO_010081: HQ394_RS18935
subclass of: SO_0000673
so part of: HQ394_RS18935
location: complement(join(70326..70783,1..13))
location: region:1-70783:-1
so has part: feature:1-13:-1:exon
so has part: feature:70326-70783:-1:exon

WP_190263461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-13:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:70326-70783:-1:exon

HQ394_RS18940
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS18940
old locus tag: HQ394_19095
so part of: sequence
location: complement(88..519)
location: region:88-519:-1
so has part: feature:88-519:-1:exon
subclass of: SO_0000010

position:88:-1
position: 88
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519:-1
position: 519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88-519:-1:exon

HQ394_RS18940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS18940
old locus tag: HQ394_19095
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFTFRRIRFFILMVFLTSLSACAMGRTNLVDTGAVDVQVENTPKISIQGVTVLADQEETIVYGRVRRLGVYNNPFSGRQVTAKAVFPDGSIHEKADTLLTRTPRARGFRSIYPVANFKIVFSEQLPRGTDLVLSFGNRFRSDG
SIO_010081: HQ394_RS18940
subclass of: SO_0000673
so part of: HQ394_RS18940
location: complement(88..519)
location: region:88-519:-1
so has part: feature:88-519:-1:exon

WP_190263462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88-519:-1:exon

HQ394_RS18945
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS18945
old locus tag: HQ394_19100
so part of: sequence
location: complement(623..1039)
location: region:623-1039:-1
so has part: feature:623-1039:-1:exon
subclass of: SO_0000010

position:623:-1
position: 623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1039:-1
position: 1039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623-1039:-1:exon

HQ394_RS18945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS18945
old locus tag: HQ394_19100
inference: COORDINATES: protein motif:HMM:NF024515.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FixH family protein
translation: MIAAALISFSSAACAADADRSQDYRFEVVDQPVAVSAHSEFDVKLTKTSTGQPVENAQITQSRLEMTMTRPPQYKSATPGPTSTEMGGEVKLVGTPSPGLYRLMGDVSMPGTWKLGIVATVPGEAQPVEGTATFKAGR
SIO_010081: HQ394_RS18945
subclass of: SO_0000673
so part of: HQ394_RS18945
location: complement(623..1039)
location: region:623-1039:-1
so has part: feature:623-1039:-1:exon

WP_190263463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:623-1039:-1:exon

HQ394_RS18950
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS18950
old locus tag: HQ394_19105
so part of: sequence
location: 1451..2683
location: region:1451-2683:1
so has part: feature:1451-2683:1:exon
subclass of: SO_0000010

position:1451:1
position: 1451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2683:1
position: 2683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1451-2683:1:exon

HQ394_RS18950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS18950
old locus tag: HQ394_19105
inference: COORDINATES: protein motif:HMM:NF014385.2
GO function: GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TolC family protein
translation: MQWLWLCILALSVFGGPARLAHAEDIRHVLESAWARNAEIAALTARRAEILARKRAAGRLTPGPPALGVGHLNDYVTGDDGYREYDVELGTPLWLPGEGTAIRRVADAELVQLDAELAVARLAVAGAVRDAYWRFRLAAGAVEVARRRLNAARALQSDLDRQVRAGQMARADLLLSVAETADARSILSTEEASATQARLAFHALTGAEPPVDFIEPEVPAQTDANHPRRIALRRTVDVTEAAARLLKVQDRDSPEVALLGVVERQLYNEPYDKRIGVRVVIPFATEGRNEPRRKANEVERTRALAELRTADYQIQAEVGKAEADVASAKERETLAEERYRAFAERLDLVERSVRVGEGALVELVRARANLFEADVARLQSQIAVMQARSRLNQALGLDPWSWAPTKEAER
SIO_010081: HQ394_RS18950
subclass of: SO_0000673
so part of: HQ394_RS18950
location: 1451..2683
location: region:1451-2683:1
so has part: feature:1451-2683:1:exon

WP_190263464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1451-2683:1:exon

HQ394_RS18955
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS18955
old locus tag: HQ394_19110
so part of: sequence
location: 2653..4467
location: region:2653-4467:1
so has part: feature:2653-4467:1:exon
subclass of: SO_0000010

position:2653:1
position: 2653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4467:1
position: 4467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2653-4467:1:exon

HQ394_RS18955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS18955
old locus tag: HQ394_19110
inference: COORDINATES: protein motif:HMM:NF027890.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter periplasmic adaptor subunit
translation: MGADEGSREMKPYASHAERGPVVGVLIAFLLLAVMTMSASLAPAHEGHDHGAPPVAPLTAVAPRVEASSESFDLVGIVRGEAMIIFLDRFGSNEPVTRATIDVTADAATVRADPRPDGSFLVQAPWLAKAGPLDLVFAIDTGEIGDLLIGTLDLPGERAIGEAVGESSMAVLARSPVLWVIGFALLVVGLVLGRSLAPRRNIAPQAPLAVPLASAPESDAESDVGSKRRVGAVIMLAVLAIATSARVVLAHGDEDHGAADKPLATITSPAAAVDSPRRLADGSLFVPKPTQRLLTVRTQPARVQEVSRTASITGRVIADPTAGGRVQAAQGGRIEPSEDGLPVIGQRVVRGQVLATVTPVITTLERGGVREQLAQIDSSVAIAEQRVARLSQLEGSVPQREIDEARRELDGLRQRRRALAPTLAEREVVRASASGVISVANVVTGQLIDGGEVLFEIVDPAKLWVEAIAYDPAAVADIRAAVASTADGETLPLDLIGRSLTLRQQAVPVQFRITRASPTLKVGTPVSVILQEARTETGIVLPSASVIGTANGEDVVFEHVSPERFIARPVRLRPFDGERIVVLAGIGEGARIVTEGTELLSQIR
SIO_010081: HQ394_RS18955
subclass of: SO_0000673
so part of: HQ394_RS18955
location: 2653..4467
location: region:2653-4467:1
so has part: feature:2653-4467:1:exon

WP_190263465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2653-4467:1:exon

HQ394_RS18960
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS18960
old locus tag: HQ394_19115
so part of: sequence
location: 4478..7594
location: region:4478-7594:1
so has part: feature:4478-7594:1:exon
subclass of: SO_0000010

position:4478:1
position: 4478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7594:1
position: 7594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4478-7594:1:exon

HQ394_RS18960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS18960
old locus tag: HQ394_19115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012566035.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter permease subunit
translation: MFNTLVNASLRNRLFVVIAAAILIVYGAMSLPTIPVDVFPDLNKPTITLMTEAEGLAAEEVEQLVTFPIETSMNGIPGVTRVRSVSTVGLSIVFVEFDWGTDIYLNRQQVTERMGLVREQLPKDIVPQMAPISSIMGEIMLIAVSSETASAMDLRDLADWVVRPRLLTIPGVSQVIPIGGEVRQYRVTPNIPLMDSLDVKHAEIVDALRQFGINTGGGYVDQAGREYLIRSIGRTARLDDLRNLVVAVRDGQPIPLRHVAEVDFAARIKRGDGGFMGNTAVILSVQKQPGADTVALTRQIEAALSDLARVVPAGIRINDALFKQANFIETSIRNVERVLVEALIVVSIVLFLFLLNWRTTFISITAIPVSILITILVFKYFGLSINTMTLGGLAIAIGELVDDAVVGVENVFRRLKQNRDTGSPRTPLAVIAAASTEVRSGIIYATIIIVLVFVPLFALSGIEGRLFAPLGVAYIVSILASLITAITLTPVLCFYLLPRMRRLSERDSLLVRALKRGXNERLLTWAFQRAPFVYLSAGIAVAVAAASVTMLPRSFLPPFNEGTLTINLQFNPGISLVESSRIGAVAERLILDVPEVKTVGRRTGRAELDEHAEGVHSSEIDVDLHPSSRRRDEILADIRARLAALPVTVNVGQPISHRLDHLLSGVRAQIALKIYGDDIDTLRTLAEEMRQRLSTIPGLVDLQVEKQVRIPQVQVKVDYQRAALYGVTPAQVTEAVQSLSNGLVVSQIVDGNRRFDVTIRLGDADRTRAGLERVIIETPLGHVPLRRVADVVETDGPNQVQRENGQRRIVVLANSDGTDMAAVVDAIRRQIANAQLPTGYFTRLEGTFQAQEEASRLIASLSLISLSLIFVVLYSRYRSAVLSLIIMGNVPLALIGSVAALWIAGQPLSVASMIGFITLAGISTRNGILKVSHYINLALYEGETFGKALVMRGSQERLTPVLMTALSAGLALLPLMINADAPGKEILHPVAITIFGGLISATXLLDTLLTPLLFHRFGRXTLVRLREQQAQLKTAEAY
SIO_010081: HQ394_RS18960
subclass of: SO_0000673
so part of: HQ394_RS18960
location: 4478..7594
location: region:4478-7594:1
so has part: feature:4478-7594:1:exon

WP_190263466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4478-7594:1:exon

HQ394_RS18965
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS18965
old locus tag: HQ394_19120
so part of: sequence
location: 7728..8012
location: region:7728-8012:1
so has part: feature:7728-8012:1:exon
subclass of: SO_0000010

position:7728:1
position: 7728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8012:1
position: 8012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7728-8012:1:exon

HQ394_RS18965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS18965
old locus tag: HQ394_19120
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQDLAGGHVELVAQDNEIVVYLFDAENKPMSAQGVIATATVLAQGKQEIVTLHPADGNVMRGRGVFIAQPGLRVVVSLTLPGQRPQLGRYAPLG
SIO_010081: HQ394_RS18965
subclass of: SO_0000673
so part of: HQ394_RS18965
location: 7728..8012
location: region:7728-8012:1
so has part: feature:7728-8012:1:exon

WP_190263467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7728-8012:1:exon

HQ394_RS20305
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS20305
pseudo: true
so part of: sequence
location: 8069..>8754
location: region:8069-8754:1
so has part: feature:8069-8754:1:exon
subclass of: SO_0000010

position:8069:1
position: 8069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8754:1
position: 8754
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8069-8754:1:exon

HQ394_RS20305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS20305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012115378.1
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: response regulator
SIO_010081: HQ394_RS20305
subclass of: SO_0000673
so part of: HQ394_RS20305
location: 8069..>8754
location: region:8069-8754:1
so has part: feature:8069-8754:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8069-8754:1:exon

HQ394_RS20310
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS20310
so part of: sequence
location: 9314..10162
location: region:9314-10162:1
so has part: feature:9314-10162:1:exon
subclass of: SO_0000010

position:9314:1
position: 9314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10162:1
position: 10162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9314-10162:1:exon

HQ394_RS20310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS20310
inference: COORDINATES: protein motif:HMM:NF014567.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MALGILLVSVFLVRSVTAPLRSLSTAADRIGIDAASPDLPQAGPREVRLAATAFNRMQARIKRLIDDRTQTLAAVSHDLKTPITRLRLRAHFVRDDELRQTIESDLDEMEAMIQSTLDFLRGDSIGEEVKAVDIGSILETVCDHLVDSGHDVVLRTGAHAPLPCRPLAIKRAFSNLVENAVKYGTRARVSLAKQADELTVTIDDDGPGIPTAELDRVFDPFYRLEISRNRETGGSGLGLTVARSTIRAHGGDVRLVNRNAGGLSVTVTLPVAAHLCRPGNTS
SIO_010081: HQ394_RS20310
subclass of: SO_0000673
so part of: HQ394_RS20310
location: 9314..10162
location: region:9314-10162:1
so has part: feature:9314-10162:1:exon

WP_223292169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9314-10162:1:exon

HQ394_RS18975
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS18975
old locus tag: HQ394_19130
so part of: sequence
location: 10438..10746
location: region:10438-10746:1
so has part: feature:10438-10746:1:exon
subclass of: SO_0000010

position:10438:1
position: 10438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10746:1
position: 10746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10438-10746:1:exon

HQ394_RS18975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS18975
old locus tag: HQ394_19130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003494050.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF305 domain-containing protein
translation: MSGTAGEPSHDHHGTSSIDPVISAYQAANEKMHRDMMITFTGDADRDFVAGMIPHHQGAIDMAEIVLKYGKDPEIRKLAQEIIAAQQKEIAWMKAWLAEKSK
SIO_010081: HQ394_RS18975
subclass of: SO_0000673
so part of: HQ394_RS18975
location: 10438..10746
location: region:10438-10746:1
so has part: feature:10438-10746:1:exon

WP_223292164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10438-10746:1:exon

HQ394_RS18980
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS18980
old locus tag: HQ394_19135
so part of: sequence
location: 10946..12208
location: region:10946-12208:1
so has part: feature:10946-12208:1:exon
subclass of: SO_0000010

position:10946:1
position: 10946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12208:1
position: 12208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10946-12208:1:exon

HQ394_RS18980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS18980
old locus tag: HQ394_19135
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFIDWLHDCGHAALELAALTSSGFLHAVLHVVVYGTPVILFLSLIWIAFALWARVKARRALRGSLDEDLHRAHAVGLTDGIFKLILRRTRFRQAILLLVAAAAMPTLYLTLEIPKHIVNHAIASATKVIQIDDIAFTQVQFLVVLCFLYLASLLANGSIKYWLNVYQGRVGELLIRLLRLMVYRGWRRNGRPGGQAQLIPIIVQEVEPVAGFAGEAFVTPVFQGGTFLTLLTFMLLQDPVLGGAALMMLPIQLAVIPPLQRRINELNRTRVREVRRLGGLLGERQPLPEAGLRQLRLLFSSIRHIQELRFSIFKKKFLMKSAINFLNNLVPFFFYLIGGYLVIEGKISFGALVAVLAAHKDFSAPLRELLMYYQVTEDVRVRYREMQRFVAGVAVQHPLGPDCEPALEVKATAAMSSIP
SIO_010081: HQ394_RS18980
subclass of: SO_0000673
so part of: HQ394_RS18980
location: 10946..12208
location: region:10946-12208:1
so has part: feature:10946-12208:1:exon

WP_223292165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10946-12208:1:exon

HQ394_RS18985
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS18985
old locus tag: HQ394_19140
so part of: sequence
location: complement(12602..13264)
location: region:12602-13264:-1
so has part: feature:12602-13264:-1:exon
subclass of: SO_0000010

position:12602:-1
position: 12602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13264:-1
position: 13264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12602-13264:-1:exon

HQ394_RS18985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS18985
old locus tag: HQ394_19140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650493.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MKTPRDPIYAGHRYPAEXLRMVEEMLAARGISVTHETIRQWSXEFGREFADRIRRRAPRRGDKWHLDEVVIGIAGKKHWLWRAVDQDGFVLDLLVQSRRDTKAAKRLFRKLLKKQGRAPRVLITDKLKSYAAAKRQIMPGVEHRQHKGLNNRAENSHQPTRRRERVMKRFKSARQIQRFLSVHDQVANVFPRRRDHDTAATLQSARSXTWAEVSGVAMAA
SIO_010081: HQ394_RS18985
subclass of: SO_0000673
so part of: HQ394_RS18985
location: complement(12602..13264)
location: region:12602-13264:-1
so has part: feature:12602-13264:-1:exon

WP_190263471.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12602-13264:-1:exon

HQ394_RS18990
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS18990
old locus tag: HQ394_19145
so part of: sequence
location: 13618..14178
location: region:13618-14178:1
so has part: feature:13618-14178:1:exon
subclass of: SO_0000010

position:13618:1
position: 13618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14178:1
position: 14178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13618-14178:1:exon

HQ394_RS18990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS18990
old locus tag: HQ394_19145
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQDIRRTLVRILAVSALIVSIVVGGTVLAFGLLAKGHAIATLARSEAALFISQLSAHFARGAADHEEVELALVNLLRERAHLPDGHFVAARAYSADGKVIAEEHAEGFSPPMLPELERKQLDVDQHRSGPPAQDEPSSCNHYQNRLFAGVPIGVDRNPTPNEIPFVTSNAYGTSAGGPTSEPFHI
SIO_010081: HQ394_RS18990
subclass of: SO_0000673
so part of: HQ394_RS18990
location: 13618..14178
location: region:13618-14178:1
so has part: feature:13618-14178:1:exon

WP_190263472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13618-14178:1:exon

HQ394_RS19000
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19000
old locus tag: HQ394_19155
so part of: sequence
location: complement(15262..15795)
location: region:15262-15795:-1
so has part: feature:15262-15795:-1:exon
subclass of: SO_0000010

position:15262:-1
position: 15262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15795:-1
position: 15795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15262-15795:-1:exon

HQ394_RS19000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19000
old locus tag: HQ394_19155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017364873.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIHHVSIPAREPRHVAEVLAELMGGTCHPFGPLEGAFTATSGDAHGTMIEVYPERVTLDIPSNDDQVVFGENKAPPNAWPFHVLLSVPLEPDEIERIGKREGWRAKSCGRGMQGRKPFFHVIEFWLENRLMIEVVSPAMAREYEDFLKNAQFSVMSDPESLQLMRATHLAPQEGGGT
SIO_010081: HQ394_RS19000
subclass of: SO_0000673
so part of: HQ394_RS19000
location: complement(15262..15795)
location: region:15262-15795:-1
so has part: feature:15262-15795:-1:exon

WP_190263474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15262-15795:-1:exon

HQ394_RS19005
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19005
old locus tag: HQ394_19160
so part of: sequence
location: complement(16568..17410)
location: region:16568-17410:-1
so has part: feature:16568-17410:-1:exon
subclass of: SO_0000010

position:16568:-1
position: 16568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17410:-1
position: 17410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16568-17410:-1:exon

HQ394_RS19005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19005
old locus tag: HQ394_19160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010219839.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MTNDEPKRYKTVDRRVIGFPLDANMPGEMVKPGELIDIKEISPLTLTDRRIYNLLIANAWERITESVEHVIEKSDLRGTHNGNERIEDSIRRLMSAIAEVKIIRDGKVAIKRVQLLGGNVEQEGERGRLYYTFPKQLIEIIKESEVFGRLKTQIMYCFKSKYALALYEIVQKRVGLKFKQAENFTVDELRALLXVPKDKLTRFPDFNKYALXKPALREVNALSEHHVTIGMIKKGKRVEQLMLMWLEKTAEEKRQVFRELERCSVGRSARIRNTVESVAF
SIO_010081: HQ394_RS19005
subclass of: SO_0000673
so part of: HQ394_RS19005
location: complement(16568..17410)
location: region:16568-17410:-1
so has part: feature:16568-17410:-1:exon

WP_190263475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16568-17410:-1:exon

HQ394_RS19010
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19010
old locus tag: HQ394_19165
so part of: sequence
location: complement(17544..18548)
location: region:17544-18548:-1
so has part: feature:17544-18548:-1:exon
subclass of: SO_0000010

position:17544:-1
position: 17544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18548:-1
position: 18548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17544-18548:-1:exon

HQ394_RS19010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19010
old locus tag: HQ394_19165
inference: COORDINATES: protein motif:HMM:NF012652.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATPase, T2SS/T4P/T4SS family
translation: MSIVELRLEDGLRHALGADVARLLDEPAVTDLLLNADGRLWVDRTGRGREDTGCTMTAADADAALRLIAHHCGVPLTRTAPVLSATLPRTGERIAATIAPITTRPTFAIRKPPAATFELTAFAPKAAATGTSANRCRHAAESGMFEALRAAVEAHRNILIAGSTGSGKTSLLSALLALPSVQRDRCLVLEDTQEIRIEAPDHVRMLTSADVGMRGLVQLSLRYRPDRIVLGEVRSGDAAMELIHAMNTGHSGSFCTVHANSAPDALGRVEDLCAEVCPQPPCRSIATAIGCIVFVQRTAGGREITEVVLVDGWQNGKYVTTAKGERLGALRICE
SIO_010081: HQ394_RS19010
subclass of: SO_0000673
so part of: HQ394_RS19010
location: complement(17544..18548)
location: region:17544-18548:-1
so has part: feature:17544-18548:-1:exon

WP_190263476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17544-18548:-1:exon

HQ394_RS19015
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19015
old locus tag: HQ394_19170
so part of: sequence
location: complement(18585..20585)
location: region:18585-20585:-1
so has part: feature:18585-20585:-1:exon
subclass of: SO_0000010

position:18585:-1
position: 18585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20585:-1
position: 20585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18585-20585:-1:exon

HQ394_RS19015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19015
old locus tag: HQ394_19170
inference: COORDINATES: protein motif:HMM:NF014581.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MISHRRVLEVSTALTMGALIGLTAGTQYVAWRLGYHAALGDPLVLVGALPLYPPWRLIAWLPWRHAVPAVRVGLAIAAGCASLPVWAGVASLVLSRRPPAFGTGTWGTRREAKRAGLLARRPAGTVLGQWSDGRLITYAGDEHQLVAGAAGSGKTTGPVISSLLAWPSSALVYDPKRELYAQTAAHRARFSGTFYIDPTCPESARFNPLWEIRTGSVHEIGDVQNVVSILIDPSGTKNSYEYWDSDAVKMLTGLILYALRERPRDEQNLAVVNDMLLDIQNTLQAMKQSVHPRVKAIAEYLLSLPDKQFGGVHGSASSALILYDDPIVARNTRCSDFRISDLVCSDQPVTCYLQVRPTDAVRLRPLTRLILTQVAQALMYDTNAATDGRAKQHRLLYLLEEFPSLGRLDFFSTQMRVMRGYGITALLIVQSFKDIISTYGRDQTIVDNCRIVVCFAAADPDTQKMISTMLGSAPEAKVSVTQPRDGFTWFKGSTSSSEHRRALLDPGEVRQLGYDEQLVLVTGEKPFRTQKVQWFRHRLLRKLGTNLRRGGQAPGQNPAILTMARQQPAAASALPGERLAEPQSPPETTQLKGAPPDDVLAQIAAQLGSNNKAAKTLFPDNVEMARKWISSARELPSAHASXRRASRRGPERLRRRRGSAAGTPDP
SIO_010081: HQ394_RS19015
subclass of: SO_0000673
so part of: HQ394_RS19015
location: complement(18585..20585)
location: region:18585-20585:-1
so has part: feature:18585-20585:-1:exon

WP_190263477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18585-20585:-1:exon

HQ394_RS19020
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19020
old locus tag: HQ394_19175
so part of: sequence
location: complement(20582..21919)
location: region:20582-21919:-1
so has part: feature:20582-21919:-1:exon
subclass of: SO_0000010

position:20582:-1
position: 20582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21919:-1
position: 21919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20582-21919:-1:exon

HQ394_RS19020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19020
old locus tag: HQ394_19175
inference: COORDINATES: protein motif:HMM:NF015354.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobA/MobL family protein
translation: MAIYHLRLTPVKKAGTTIARSAHHGGHRLTTRGALGKAAYLAGERLRGMTXQTIDYRAKADGVEHSQLILPGGGTADRERLWSAIDAYPTQRPTATIARDMIVAFPHELGFEERKAAIALGTWIAERYGVAVDLGMHRPDVHGGTDERNYHAHFLMSERRVSATGEIGLVNRGLNQMVCSRRDARRGRTQRQQTAAAEIRAAWQEIANAALATGGHQERIDARMLKAQGIDRAASRHRGAAATKRLREAEQXEGGEQVRRRDGPTERSRGAAAVATAGRTVAELRAELAAAARELAGRRRVAGDRIAAIQEQRKLAAMGPAITAEIGSVQGWLHDPARQLCRAWEAADRASALRRRVREARRARAALRAPTREEAAELRAAGRTRARADKLCRRVEKALDQVARLDPAERITVPAAPVNSRQLDTIERELTRHARKARESAMELQ
SIO_010081: HQ394_RS19020
subclass of: SO_0000673
so part of: HQ394_RS19020
location: complement(20582..21919)
location: region:20582-21919:-1
so has part: feature:20582-21919:-1:exon

WP_190263478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20582-21919:-1:exon

HQ394_RS19025
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19025
old locus tag: HQ394_19180
so part of: sequence
location: complement(22077..22814)
location: region:22077-22814:-1
so has part: feature:22077-22814:-1:exon
subclass of: SO_0000010

position:22077:-1
position: 22077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22814:-1
position: 22814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22077-22814:-1:exon

HQ394_RS19025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19025
old locus tag: HQ394_19180
inference: COORDINATES: protein motif:HMM:NF019128.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell wall hydrolase
translation: MRPRAVVAALALLALPAPAAALDLSETDVEAIGRVVYAEAAGEPAAGKVAVIDTILNRLGSGRFGSSVQSIVDQPNAFEPVTRAGGWRQLPPLTATQRAELATILSLKAGGYLGDISSGALYFQNAAIVAERVATGKVAPSLVHFGGMPKTAVIGHHTFYRPDDPAGGPPPGTTTPARRTLRSSFVGDDPALAPAPPETGEGETVLVLSLTFRLQRLRRRDETAWSSSWLGYRPSGLDRRCPGFG
SIO_010081: HQ394_RS19025
subclass of: SO_0000673
so part of: HQ394_RS19025
location: complement(22077..22814)
location: region:22077-22814:-1
so has part: feature:22077-22814:-1:exon

WP_223292166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22077-22814:-1:exon

HQ394_RS19030
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19030
old locus tag: HQ394_19185
so part of: sequence
location: complement(22811..22963)
location: region:22811-22963:-1
so has part: feature:22811-22963:-1:exon
subclass of: SO_0000010

position:22811:-1
position: 22811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22963:-1
position: 22963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22811-22963:-1:exon

HQ394_RS19030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19030
old locus tag: HQ394_19185
inference: COORDINATES: protein motif:HMM:NF021981.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S26 family signal peptidase
translation: MPSWQGCRRLVEGELAVFADRLPDSLDSRFYGAVEAAQARVYRPLWTQAR
SIO_010081: HQ394_RS19030
subclass of: SO_0000673
so part of: HQ394_RS19030
location: complement(22811..22963)
location: region:22811-22963:-1
so has part: feature:22811-22963:-1:exon

WP_190263492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22811-22963:-1:exon

HQ394_RS19040
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19040
old locus tag: HQ394_19195
so part of: sequence
location: complement(23341..24159)
location: region:23341-24159:-1
so has part: feature:23341-24159:-1:exon
subclass of: SO_0000010

position:23341:-1
position: 23341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24159:-1
position: 24159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23341-24159:-1:exon

HQ394_RS19040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19040
old locus tag: HQ394_19195
inference: COORDINATES: protein motif:HMM:NF015688.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbI/VirB10 family protein
translation: MFATTADSTALPATEADKGTLPTQSGPEYRPGTSDGVDKLEADQRQGLSAQKNRWLANAGTGGEDYVTQPFAPPISRYMLQASTIIRAVTLNEVNSDLPGDVAAIVSEDVCDTPTGDHVLIPAASKLYGRYNDQLSYGQRRAQISWTRILFPDGSSQNIGSMAGTDGSGAAGVEGEVDRHWGEMAGAIGATALFTILGQAGTLLRGDGGNTNIGVVGAGAAGDAAAQVGGAFIHRELNRPNTLIIPQGTSVAVMLSKDLALPPYEAHVWARR
SIO_010081: HQ394_RS19040
subclass of: SO_0000673
so part of: HQ394_RS19040
location: complement(23341..24159)
location: region:23341-24159:-1
so has part: feature:23341-24159:-1:exon

WP_190263481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23341-24159:-1:exon

HQ394_RS19045
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19045
old locus tag: HQ394_19200
so part of: sequence
location: complement(24205..24834)
location: region:24205-24834:-1
so has part: feature:24205-24834:-1:exon
subclass of: SO_0000010

position:24205:-1
position: 24205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24834:-1
position: 24834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24205-24834:-1:exon

HQ394_RS19045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19045
old locus tag: HQ394_19200
inference: COORDINATES: protein motif:HMM:NF015487.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbG/VirB9 family P-type conjugative transfer protein
translation: MRSAALRRRTXFVARDTPFDPTTLNRDYRIDVVGGARPRWTPVAAFDLGTRSYIEFPANIGQVSAPALFVIDEGGLATPAPFRPRGRFYEIDRVFGTAELRQXRNGGPHHPGRSGRMTAPLIPPQPVGRNWRAIGIAAGVAGMCTAAFVWYSVAGKGEKPAPRDERTDFTHTQVELPARSFDVGYQSPPTAVVAPPXGGADTAAGTPTR
SIO_010081: HQ394_RS19045
subclass of: SO_0000673
so part of: HQ394_RS19045
location: complement(24205..24834)
location: region:24205-24834:-1
so has part: feature:24205-24834:-1:exon

WP_190263493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24205-24834:-1:exon

HQ394_RS19055
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19055
old locus tag: HQ394_19210
so part of: sequence
location: complement(25363..26130)
location: region:25363-26130:-1
so has part: feature:25363-26130:-1:exon
subclass of: SO_0000010

position:25363:-1
position: 25363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26130:-1
position: 26130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25363-26130:-1:exon

HQ394_RS19055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19055
old locus tag: HQ394_19210
inference: COORDINATES: protein motif:HMM:NF016238.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB8/TrbF family protein
translation: MSGAELLRVSADLAKSALQRTKRAGGGAPPAWEEDTKVYPSLERDTAFAAAAAIVDRRDGYAMRLARAWQMVSIVAVIAAGALGAGWYHQAQKSSIERFFVPIDRFGDAAEVHVAGQLTPTTTMMIATVEQFIGCAFALSSDQNVNAERYQCLKSMIDGPAKQRWNDWYYQIKDTATERLVRIVTIKQTANPNIWNVIWQEQDWKDGVARPWRRMNGDVTLEYREPRNARDVFANKRGLFVVNLLFAPEDRAERN
SIO_010081: HQ394_RS19055
subclass of: SO_0000673
so part of: HQ394_RS19055
location: complement(25363..26130)
location: region:25363-26130:-1
so has part: feature:25363-26130:-1:exon

WP_190263483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25363-26130:-1:exon

HQ394_RS19060
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19060
old locus tag: HQ394_19215
so part of: sequence
location: complement(26127..27314)
location: region:26127-27314:-1
so has part: feature:26127-27314:-1:exon
subclass of: SO_0000010

position:26127:-1
position: 26127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27314:-1
position: 27314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26127-27314:-1:exon

HQ394_RS19060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19060
old locus tag: HQ394_19215
inference: COORDINATES: protein motif:HMM:NF016491.2
GO process: GO:0030255 - protein secretion by the type IV secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MKILAYILATLAVGAVALTIVVNVYSHTPDNTKARELQQKISQPREKLSMTSNVAIKIHSKRTDHMDTFSQFGDAFGVVIANGFDRLMPIARYLAISMMTIALMLVCAGLILRRSNIMNAGFMFAITGGFYILVIESVMPIGEGIMESAVRYGLIAGGSGMNAATFLRSPDTLFTIGYAKATDLFEVAALACDNSSIGCLGAIDTWLPTHAAAWVVFLTFALVGVVMLATAILFKLALLAGVLLLPLAVFPPTSSFGFMPIRAVIHFAVQLMVLTLVTSVAVLVFSKLTVGAHPGFSSARPFLLASLVFVGMVLGSSRLAYSLTSGAMLQAGALFGAPAGIAVMAGRSVAGHLDGPATAATSKGWQALKAAGARLPGAARSAGRTLGAVGRRANP
SIO_010081: HQ394_RS19060
subclass of: SO_0000673
so part of: HQ394_RS19060
location: complement(26127..27314)
location: region:26127-27314:-1
so has part: feature:26127-27314:-1:exon

WP_223292167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26127-27314:-1:exon

HQ394_RS19065
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19065
old locus tag: HQ394_19220
so part of: sequence
location: complement(27320..28087)
location: region:27320-28087:-1
so has part: feature:27320-28087:-1:exon
subclass of: SO_0000010

position:27320:-1
position: 27320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28087:-1
position: 28087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27320-28087:-1:exon

HQ394_RS19065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19065
old locus tag: HQ394_19220
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRRLRLLATVSLLALASCPVFAQIPVTDAGANTSLATQIAQGVEELASWAQQLEQMVKLVTLQNIAGEVLGDAVGGEFTDLVNAATDLYNDANGLYGSVTSKVGQWQSEIGVFMPPPGGYGEMSTWDLIAKARQMQRLLTQGTAQAQLAQSKLIDRQAAYMREAMAGGAQADRARSAVSATQAASHILAAQAAQLNALNNTLGTLATSIEMKILTDEGRLQSAREMQRKDIEAERNVINAGAAQMRSNPLQWGR
SIO_010081: HQ394_RS19065
subclass of: SO_0000673
so part of: HQ394_RS19065
location: complement(27320..28087)
location: region:27320-28087:-1
so has part: feature:27320-28087:-1:exon

WP_190263485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27320-28087:-1:exon

HQ394_RS19070
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19070
old locus tag: HQ394_19225
so part of: sequence
location: complement(28094..30559)
location: region:28094-30559:-1
so has part: feature:28094-30559:-1:exon
subclass of: SO_0000010

position:28094:-1
position: 28094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30559:-1
position: 30559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28094-30559:-1:exon

HQ394_RS19070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19070
old locus tag: HQ394_19225
inference: COORDINATES: protein motif:HMM:NF015118.2
note: type IV secretion system VirB4 family; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbE
translation: MQIIIRPPRMRCLSDALAWGAMLAPDLIATKQAEFMTVLRYRPPDLASSSPEQLVSARQQLNAAIRRFGRGWALWFECQRNETCEYPSADWPDPVSRLIDDQRRALFTQPGTQFRSGWYITLLYAPATDAAGQLAAHFDENLAERRTIDQRYRAELDTFRRGVAAFQEHLASCMPEVAPLAGDDLVTYLHSTVSTRRHWVRMPPLPCFLAEYLANEDYVSGYAPMLGDHHIRTIRIKGQPDATVPGIFDTLNYLEFPYRNVARWLPYSREDAERELTLRKRMWADRRKTLATKILARFVGDDGSRDNIDATRRMEEADMALLALASGDFSFGLWSHTITLSDPDPDVLEERCKAVQQVLGAAGFISQVARHDAMSAWIGSLPGHPQGDLGRFLACSLSFSEVVPATAVWTGPDRDEHRNGPPLLRCLSEGATEFRYCLHQPGSDVGMTAVIGQIGAGKSVLLGAMIAGHQKYPGSRVIVIDRGASAKGITLALGGSFHELAGDDAAVSLQPLAFIDQAAELGWAFEFALGCLAQEGVVATPRQKEEITLALQTLATRPQNQRTLTMLRALIQDDAVKTALGPFCLGGACGTLLDNDEHRLGAGADVVCFETATLLERPTAVGPVLATVFHMIERGLDGRPTLLVIDEAWAVLDHPLLAAKLREWLKTARKANVAVIIATQSLVDIASSSIREVLSESCPTRIYTANSRALERATAATYASFGLTPKQIAIIAELRPKAEYVVTVPGLXRRIELALSPVELAFIARNRPEDRAAMDRVLTAGPRDEYPWRWLAHCGFDAENIARWRIHGGAGAPAAALQAAE
SIO_010081: HQ394_RS19070
subclass of: SO_0000673
so part of: HQ394_RS19070
location: complement(28094..30559)
location: region:28094-30559:-1
so has part: feature:28094-30559:-1:exon

WP_190263486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28094-30559:-1:exon

HQ394_RS19075
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19075
old locus tag: HQ394_19230
so part of: sequence
location: complement(30563..30850)
location: region:30563-30850:-1
so has part: feature:30563-30850:-1:exon
subclass of: SO_0000010

position:30563:-1
position: 30563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30850:-1
position: 30850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30563-30850:-1:exon

HQ394_RS19075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19075
old locus tag: HQ394_19230
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDLPSDWSIPTFRGISEPVTLLGLPPEQAALAVFLGAGTAVLLLIFAGLIPAVIAAAILIPSVFFVFRRLYDSDPYWGEHLTTHRWPTTVWLGQ
SIO_010081: HQ394_RS19075
subclass of: SO_0000673
so part of: HQ394_RS19075
location: complement(30563..30850)
location: region:30563-30850:-1
so has part: feature:30563-30850:-1:exon

WP_190263487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30563-30850:-1:exon

HQ394_RS19080
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19080
old locus tag: HQ394_19235
so part of: sequence
location: complement(30915..31361)
location: region:30915-31361:-1
so has part: feature:30915-31361:-1:exon
subclass of: SO_0000010

position:30915:-1
position: 30915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31361:-1
position: 31361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30915-31361:-1:exon

HQ394_RS19080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19080
old locus tag: HQ394_19235
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTLAQRSRSPAFSGDPQPLLATVGRVGALTAIGAVALFAPEAFAAGGGTPIDQAATNAVDIAQGLGVAACTAGVIGTCAGAIMRSGAFMAGGATTAVAGGAWAGAPDVVQQLIGGGAGVGLSDLAVLQPATIDVLGTLASLVTSLFA
SIO_010081: HQ394_RS19080
subclass of: SO_0000673
so part of: HQ394_RS19080
location: complement(30915..31361)
location: region:30915-31361:-1
so has part: feature:30915-31361:-1:exon

WP_190263488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30915-31361:-1:exon

HQ394_RS19085
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19085
old locus tag: HQ394_19240
so part of: sequence
location: 31856..32227
location: region:31856-32227:1
so has part: feature:31856-32227:1:exon
subclass of: SO_0000010

position:31856:1
position: 31856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32227:1
position: 32227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31856-32227:1:exon

HQ394_RS19085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19085
old locus tag: HQ394_19240
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAYKRTDIGVSMSLPIGMTEAFKRLALARTDARDPRVRRRRVWIQDLYEEAVRDFLIRLQRRERVFFAATPLRRKEVKTLRLEPALWTQVKEISARFDVSVGTVVRTACSEFLEANGITLDRS
SIO_010081: HQ394_RS19085
subclass of: SO_0000673
so part of: HQ394_RS19085
location: 31856..32227
location: region:31856-32227:1
so has part: feature:31856-32227:1:exon

WP_223292168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31856-32227:1:exon

HQ394_RS19090
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
gene: repC
locus tag: HQ394_RS19090
old locus tag: HQ394_19245
pseudo: true
so part of: sequence
location: complement(32500..33866)
location: region:32500-33866:-1
so has part: feature:32500-33866:-1:exon
subclass of: SO_0000010

position:32500:-1
position: 32500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33866:-1
position: 33866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32500-33866:-1:exon

HQ394_RS19090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
gene: repC
locus tag: HQ394_RS19090
old locus tag: HQ394_19245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013641202.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: plasmid replication protein RepC
SIO_010081: HQ394_RS19090
subclass of: SO_0000673
so part of: HQ394_RS19090
location: complement(32500..33866)
location: region:32500-33866:-1
so has part: feature:32500-33866:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32500-33866:-1:exon

HQ394_RS19095
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19095
old locus tag: HQ394_19250
so part of: sequence
location: complement(34044..34259)
location: region:34044-34259:-1
so has part: feature:34044-34259:-1:exon
subclass of: SO_0000010

position:34044:-1
position: 34044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34259:-1
position: 34259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34044-34259:-1:exon

HQ394_RS19095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19095
old locus tag: HQ394_19250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013641303.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix protein, CopG family
translation: MGGCQIKSSAESVRAYRQRLNASGGQEVLFQLPKATVELIDEIKERQGLRSRSQALLQLIELGREAIRQTA
SIO_010081: HQ394_RS19095
subclass of: SO_0000673
so part of: HQ394_RS19095
location: complement(34044..34259)
location: region:34044-34259:-1
so has part: feature:34044-34259:-1:exon

WP_190263490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34044-34259:-1:exon

HQ394_RS19100
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19100
old locus tag: HQ394_19255
so part of: sequence
location: complement(34623..34916)
location: region:34623-34916:-1
so has part: feature:34623-34916:-1:exon
subclass of: SO_0000010

position:34623:-1
position: 34623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34916:-1
position: 34916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34623-34916:-1:exon

HQ394_RS19100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19100
old locus tag: HQ394_19255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012477434.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKKPAALSADLVAVKGAAVPAPDMPGRASPMPGPRAVAVTPAAAAKPEREGLXLPLNFRVSASFRREFKTYAARHDLKLNELLRLSFEAYRRQNGD
SIO_010081: HQ394_RS19100
subclass of: SO_0000673
so part of: HQ394_RS19100
location: complement(34623..34916)
location: region:34623-34916:-1
so has part: feature:34623-34916:-1:exon

WP_190263491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34623-34916:-1:exon

HQ394_RS19105
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19105
old locus tag: HQ394_19260
so part of: sequence
location: complement(34885..35571)
location: region:34885-35571:-1
so has part: feature:34885-35571:-1:exon
subclass of: SO_0000010

position:34885:-1
position: 34885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35571:-1
position: 35571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34885-35571:-1:exon

HQ394_RS19105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19105
old locus tag: HQ394_19260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007967576.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MQVIVLASQKXGAGKTTLAAHIAVAAEAVGDGPAVLIDTDPQGSLSAWWNVRAAESPALAPTTITELPAKLEALAAAGYAFAVVDTPPAITDAIGAVVASADLVLIPTRPSPHDLRAVGSTVALVQAAGKPFVFAVTQAKPNTRLTVQAIAALSAHGQVAPSIVHDRVDYAGSMIDGRTVQETDAKGRGAEEMSNLWSFLKARLQESTKTRNKEGMSGHDEKARRALG
SIO_010081: HQ394_RS19105
subclass of: SO_0000673
so part of: HQ394_RS19105
location: complement(34885..35571)
location: region:34885-35571:-1
so has part: feature:34885-35571:-1:exon

WP_190263494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34885-35571:-1:exon

HQ394_RS19110
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19110
old locus tag: HQ394_19265
so part of: sequence
location: complement(36331..37248)
location: region:36331-37248:-1
so has part: feature:36331-37248:-1:exon
subclass of: SO_0000010

position:36331:-1
position: 36331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37248:-1
position: 37248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36331-37248:-1:exon

HQ394_RS19110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19110
old locus tag: HQ394_19265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006966982.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zincin-like metallopeptidase domain-containing protein
translation: MTSTSRADIYSRITGKIVADLEQGVRPWMKPWNADHAAGKITRPLRHNGIPYKGINVVMLWSAAVTKGYACPLWLTFRQALELGGHVRKGETGELVVYADRIRRTETNDKGEDVEREIPFLKGYTVFNAEQCDGLPAHYSARAEPPPLSPMQRIETAERFFAATGADIRHGGTRAFYAEGPDYVQMPXFETFRDAESHAATLAHEIVHWTKHGKRLARDFGRVRHGDEGCAREELVAELGSAFLAADLAITPEVRDDHAAYIASWLEVLKGDKRFIFTAAAHAQRAVDYLHGLQPQQAEEERAAA
SIO_010081: HQ394_RS19110
subclass of: SO_0000673
so part of: HQ394_RS19110
location: complement(36331..37248)
location: region:36331-37248:-1
so has part: feature:36331-37248:-1:exon

WP_190263432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36331-37248:-1:exon

HQ394_RS19115
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19115
old locus tag: HQ394_19270
so part of: sequence
location: 37653..38072
location: region:37653-38072:1
so has part: feature:37653-38072:1:exon
subclass of: SO_0000010

position:37653:1
position: 37653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38072:1
position: 38072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37653-38072:1:exon

HQ394_RS19115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19115
old locus tag: HQ394_19270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013984772.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6088 family protein
translation: MRRPKTLRERIEERIARKAGEDVFLPREFTDLGGEDQVLRALRGLVRDKRLVRLGYGVYGRATVSRLSGXTLLYSPNGFAGAARQALTKLGVKWEPTEAERAYNEGRSTQVPVNPVVRIRGRFSRQLRYKNTELVLERR
SIO_010081: HQ394_RS19115
subclass of: SO_0000673
so part of: HQ394_RS19115
location: 37653..38072
location: region:37653-38072:1
so has part: feature:37653-38072:1:exon

WP_190263433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37653-38072:1:exon

HQ394_RS19120
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19120
old locus tag: HQ394_19275
so part of: sequence
location: complement(38405..38791)
location: region:38405-38791:-1
so has part: feature:38405-38791:-1:exon
subclass of: SO_0000010

position:38405:-1
position: 38405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38791:-1
position: 38791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38405-38791:-1:exon

HQ394_RS19120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19120
old locus tag: HQ394_19275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012218065.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF302 domain-containing protein
translation: MDYYFARTLSASFDDALGRATEALKQEGFGIISDIDVAATMRAKLGVEFRKYRILGACNPMLAHEALQLEDKIGLMLPCNVIVQDKGDGRTEVAVIDPVASMLAVENAPLKQAAEIVRAKLKAAVERL
SIO_010081: HQ394_RS19120
subclass of: SO_0000673
so part of: HQ394_RS19120
location: complement(38405..38791)
location: region:38405-38791:-1
so has part: feature:38405-38791:-1:exon

WP_190263434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38405-38791:-1:exon

HQ394_RS19125
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19125
old locus tag: HQ394_19280
so part of: sequence
location: complement(38932..39393)
location: region:38932-39393:-1
so has part: feature:38932-39393:-1:exon
subclass of: SO_0000010

position:38932:-1
position: 38932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39393:-1
position: 39393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38932-39393:-1:exon

HQ394_RS19125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19125
old locus tag: HQ394_19280
inference: COORDINATES: protein motif:HMM:NF012264.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c
translation: MEPDTMGRGMMGPGMMGRGMGGMAGSMPRHHQAMMSGVPAPYDGFSDPLPRTRQTLERGATVYAENCASCHGPTGRGDGEAGRDLSPPPGNLAWLSQMPMVRWDPFMYWTVAEGGASFGSAMPAFKDTLSSDDIWAVIAYVQARLPQTAGSAP
SIO_010081: HQ394_RS19125
subclass of: SO_0000673
so part of: HQ394_RS19125
location: complement(38932..39393)
location: region:38932-39393:-1
so has part: feature:38932-39393:-1:exon

WP_190263435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38932-39393:-1:exon

HQ394_RS19130
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19130
old locus tag: HQ394_19285
so part of: sequence
location: 39805..40119
location: region:39805-40119:1
so has part: feature:39805-40119:1:exon
subclass of: SO_0000010

position:39805:1
position: 39805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40119:1
position: 40119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39805-40119:1:exon

HQ394_RS19130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19130
old locus tag: HQ394_19285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008452460.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloregulator ArsR/SmtB family transcription factor
translation: MPTLEGAQIAELAELLRLLGEPTRLRILLACLTEPASVGDIAARVNIPRSLVSHHLRMLRAGRFLRSTRNGKQIIYSPVDDRIRCILQDLVEHVVEAADERGDG
SIO_010081: HQ394_RS19130
subclass of: SO_0000673
so part of: HQ394_RS19130
location: 39805..40119
location: region:39805-40119:1
so has part: feature:39805-40119:1:exon

WP_223292156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39805-40119:1:exon

HQ394_RS19135
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19135
old locus tag: HQ394_19290
so part of: sequence
location: 40173..42305
location: region:40173-42305:1
so has part: feature:40173-42305:1:exon
subclass of: SO_0000010

position:40173:1
position: 40173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42305:1
position: 42305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40173-42305:1:exon

HQ394_RS19135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19135
old locus tag: HQ394_19290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020403957.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation-translocating P-type ATPase
translation: MPHQATRTVEFYVDNLDCENEANAIRRGLAGSPGLVEVTVYPKSAKVSIAYAAVTTVPAQFAERLRSLGYPPRKHPREQRLPKPWRNPKVLTSALSGLLLLAGWLASMASATEVVSLPLYVAAILVGGYFFGREAIEELVFEREIGIELLMSVAAVVAAVMGQPAEGATLVFLYSISEAAEGYTEEKTRSAIKALMALAPKVALVRREGREIEIPVEELRAGEAFIARPGQSMPTDGEILSGASSVNEAPVTGEXVPVEKGPGDQVFAGTINGEAALEVRATRTYADNTLARIIQMVEEAQERRGRSQRFIERFGAWYSPAVLCLGIVAALGLPVLLDLSWQDAVLRATVFIVAAAPCALVISIPITMVAALGTAARNGVLIKGGMYVEELGKVSVVAVDKTGTLTSGEPQVTDILLAARRAGAPADEDSLLAAAAAVERHSEXPLARAIVRRAEESGLAISVVTGFRSMTGAGAEASVDGRRIYIGNPALFENRLNIPLADIKNEIARLQEDGKTVIVVGDDRTAWGLIAVRDNLRPNARQAIAALHEAGIRSVVMLTGDNPRTANAIAKEASIDEVFAELRPEDKVARVRALAQERGHVAMVGDGVNDAPALAEATVGIAMGAAGTDVALETADVALMADDLEKLVYALTLAQRTQTVVKQNLALSAVVIGALIIGAMAGAFSLPIVVVAHEVSEFIVIASGLRMLRS
SIO_010081: HQ394_RS19135
subclass of: SO_0000673
so part of: HQ394_RS19135
location: 40173..42305
location: region:40173-42305:1
so has part: feature:40173-42305:1:exon

WP_190263437.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40173-42305:1:exon

HQ394_RS19140
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
gene: lspA
locus tag: HQ394_RS19140
old locus tag: HQ394_19295
so part of: sequence
location: 42311..42802
location: region:42311-42802:1
so has part: feature:42311-42802:1:exon
subclass of: SO_0000010

position:42311:1
position: 42311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42802:1
position: 42802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42311-42802:1:exon

HQ394_RS19140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
gene: lspA
locus tag: HQ394_RS19140
old locus tag: HQ394_19295
EC number: 3.4.23.36
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009209125.1
GO component: GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO function: GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptidase II
translation: MRLAAPIALSIGVLVLDQATKRLAEAVFAESMRAIPVTPFFNLVLSHNRGISFGLFRSEHAYAPFILALVALTIVAGLAVWLWRSKSSIQSFGLAAILGGAISNVIDRLEDGAVTDFLDFYVGAYHWPAFNLADTAIFCGVAALLFESVWPRSTVTRPHAADD
SIO_010081: HQ394_RS19140
subclass of: SO_0000673
so part of: HQ394_RS19140
location: 42311..42802
location: region:42311-42802:1
so has part: feature:42311-42802:1:exon

WP_190263438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42311-42802:1:exon

HQ394_RS19145
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19145
old locus tag: HQ394_19300
pseudo: true
so part of: sequence
location: 43149..>43329
location: region:43149-43329:1
so has part: feature:43149-43329:1:exon
subclass of: SO_0000010

position:43149:1
position: 43149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43329:1
position: 43329
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43149-43329:1:exon

HQ394_RS19145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19145
old locus tag: HQ394_19300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001067793.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: HQ394_RS19145
subclass of: SO_0000673
so part of: HQ394_RS19145
location: 43149..>43329
location: region:43149-43329:1
so has part: feature:43149-43329:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43149-43329:1:exon

HQ394_RS19150
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
gene: uppP
locus tag: HQ394_RS19150
old locus tag: HQ394_19305
so part of: sequence
location: 43645..44520
location: region:43645-44520:1
so has part: feature:43645-44520:1:exon
subclass of: SO_0000010

position:43645:1
position: 43645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44520:1
position: 44520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43645-44520:1:exon

HQ394_RS19150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
gene: uppP
locus tag: HQ394_RS19150
old locus tag: HQ394_19305
EC number: 3.6.1.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019197529.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: undecaprenyl-diphosphatase UppP
translation: MAEACTNGVDTGFVALGYAKVALLGVVQGITELLPISSTAHMRIVPALLGWQDPGSAFSAAMQLAALAAVVSYXFWGDVSELATNSLRAVAHRDFSNRHFRFSVWIVFATIPIGLTGLALSSTLNACGSPLRTLAVIGWASIVMAILLALAEIYARHKRTLENVTLTDVMVVGIAQIGALIPGVSRSGSTLTAALSLGLKREEAARFSFLLGLPAIALAGFKEIWELHKANLSLDGWFILLIGLIVASVSAFFAIWGLMRVLERFSAWPFVIYRGALGVFLISAVALGRLT
SIO_010081: HQ394_RS19150
subclass of: SO_0000673
so part of: HQ394_RS19150
location: 43645..44520
location: region:43645-44520:1
so has part: feature:43645-44520:1:exon

WP_190263439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43645-44520:1:exon

HQ394_RS19155
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19155
old locus tag: HQ394_19310
so part of: sequence
location: 44543..44752
location: region:44543-44752:1
so has part: feature:44543-44752:1:exon
subclass of: SO_0000010

position:44543:1
position: 44543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44752:1
position: 44752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44543-44752:1:exon

HQ394_RS19155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19155
old locus tag: HQ394_19310
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIANNNNNESEIQLDASNAAERRTLLWALGINFLQVIVAGLVGVIADSTGFLGAALDNLGDAVVYGPCV
SIO_010081: HQ394_RS19155
subclass of: SO_0000673
so part of: HQ394_RS19155
location: 44543..44752
location: region:44543-44752:1
so has part: feature:44543-44752:1:exon

WP_223292157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44543-44752:1:exon

HQ394_RS19160
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19160
old locus tag: HQ394_19315
so part of: sequence
location: complement(44769..45257)
location: region:44769-45257:-1
so has part: feature:44769-45257:-1:exon
subclass of: SO_0000010

position:44769:-1
position: 44769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45257:-1
position: 45257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44769-45257:-1:exon

HQ394_RS19160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19160
old locus tag: HQ394_19315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007406331.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MAEHXRLRNGATAIARIEQLLREMRADDILVVTRLDRLARSTAELLRIAEVIAEKSAGLQSLEEPWADTTSPAGRMVLTVFAGVAEFERALIRLRTDEGRQAAKRRGVSFGRPPKLRATQKTLVLALVEEGRSISEVARTFNVHPATIHRCLNEHQAAKPAL
SIO_010081: HQ394_RS19160
subclass of: SO_0000673
so part of: HQ394_RS19160
location: complement(44769..45257)
location: region:44769-45257:-1
so has part: feature:44769-45257:-1:exon

WP_223292158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44769-45257:-1:exon

HQ394_RS19165
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
gene: lspA
locus tag: HQ394_RS19165
old locus tag: HQ394_19320
so part of: sequence
location: 45246..45608
location: region:45246-45608:1
so has part: feature:45246-45608:1:exon
subclass of: SO_0000010

position:45246:1
position: 45246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45608:1
position: 45608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45246-45608:1:exon

HQ394_RS19165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
gene: lspA
locus tag: HQ394_RS19165
old locus tag: HQ394_19320
EC number: 3.4.23.36
inference: COORDINATES: protein motif:HMM:TIGR00077.1
GO component: GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO function: GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptidase II
translation: MLSHNRGISFGLLRSEHAYAPYVLVLVALSIVAGLAVWLWRSDSAIERLGLSAIVGGALSNAVDRLEDGSVTDFLDFHVGAYHWPAFNLADAAITCGVAALLFGSVWPRSTVTRPHAADD
SIO_010081: HQ394_RS19165
subclass of: SO_0000673
so part of: HQ394_RS19165
location: 45246..45608
location: region:45246-45608:1
so has part: feature:45246-45608:1:exon

WP_223292159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45246-45608:1:exon

HQ394_RS19170
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19170
old locus tag: HQ394_19325
so part of: sequence
location: 45886..46335
location: region:45886-46335:1
so has part: feature:45886-46335:1:exon
subclass of: SO_0000010

position:45886:1
position: 45886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46335:1
position: 46335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45886-46335:1:exon

HQ394_RS19170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19170
old locus tag: HQ394_19325
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMVKLPGTVRVFIGLLLVLAHVALQPGKALSFVLCTEQDGRTIVEFAAAGSCQHPASIVDKGVAAVTASCCPGCSDRILPAEPSPTVASKRGEAPRTVLPTGPPSQDVAFASVDYPIAEPAVCYGRYPFPDADFSDPFLIALRSVRLLT
SIO_010081: HQ394_RS19170
subclass of: SO_0000673
so part of: HQ394_RS19170
location: 45886..46335
location: region:45886-46335:1
so has part: feature:45886-46335:1:exon

WP_190263440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45886-46335:1:exon

HQ394_RS19175
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19175
old locus tag: HQ394_19330
so part of: sequence
location: 46419..47813
location: region:46419-47813:1
so has part: feature:46419-47813:1:exon
subclass of: SO_0000010

position:46419:1
position: 46419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47813:1
position: 47813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46419-47813:1:exon

HQ394_RS19175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19175
old locus tag: HQ394_19330
inference: COORDINATES: protein motif:HMM:NF014385.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TolC family protein
translation: MPRPLLIVLCALAPVVTGCASPIRSTPSLPPPRTLGLPPAEPAGPAGLNNRSSPISDVNERDARPGEAVTLDGAIRRVLANSPDLAAAAEAVRAREGDARQAALWPNPDLIGEAENFGGTGDQQSFETAEYTVSLAQPIDVSGKVRRRSTAADYERRLSGWDYETTRLDLITSTRKAYADLVAAQRNVELTRELARLADDLAAAVGARVQAGKVSPVEATRIEVVRSATRAEALRAEQELSTARAALAALWGDAGSPVGWATEESQVDAGMPPSSTLESLLAGAPEAARWSDEIALREAEFDLARATAFPDVTASLGARRFAENDDYAFVAGLSVPLPVFDRNQGAIAAATSRRTEVERRRAAFLARQRADFQAAYDDVRRAEISVRSLDDRIIPSAQSVFTATTIGYQAGKFSLIDLLDAQRTLFEAQVQGVEARAALTKARADLERLIARPVEAAQSSNTGG
SIO_010081: HQ394_RS19175
subclass of: SO_0000673
so part of: HQ394_RS19175
location: 46419..47813
location: region:46419-47813:1
so has part: feature:46419-47813:1:exon

WP_223292160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46419-47813:1:exon

HQ394_RS19180
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19180
old locus tag: HQ394_19335
so part of: sequence
location: 47820..49139
location: region:47820-49139:1
so has part: feature:47820-49139:1:exon
subclass of: SO_0000010

position:47820:1
position: 47820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49139:1
position: 49139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47820-49139:1:exon

HQ394_RS19180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19180
old locus tag: HQ394_19335
inference: COORDINATES: protein motif:HMM:TIGR01730.1
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter periplasmic adaptor subunit
translation: MTRILPTITALVMIGGAIALGSFADLANADDTLRTPASAGDSGQPPDHDDNDAGHAHDKPHDERAVGKTSHGPAEGTDGHGHQDEGHAEGVKLSPEQLREFGIGVGTAEPGALDVFIDLPAEIAFNGDRLAHVTPRVPGVVIKVDKSLGDPVRADERLALMQSRELAEAKADYLADRERLTLARAIFERESGLWRAKVTSEQEYLQAKQALAEAEIEKRSSEQKLHALGFDDAYIERLPRQPEAELTIVPLRAPFQGVVVERHATLGERIGEDTAAFVVADLSSVWLNISIYPKDLGRVTVGQKVSVALPDGSPAIGQIRFIAPNVGEETRTARALAVLDNTGGRLRPGSFVTARIAVDSQTARVRVPKTALQTHEGETVVFVAADEGFVPRPIKTGSSDGDFVEIVDGLQKGERYAQTGAFTLKAQLAKASFGDGHAH
SIO_010081: HQ394_RS19180
subclass of: SO_0000673
so part of: HQ394_RS19180
location: 47820..49139
location: region:47820-49139:1
so has part: feature:47820-49139:1:exon

WP_190263442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47820-49139:1:exon

HQ394_RS19185
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19185
old locus tag: HQ394_19340
so part of: sequence
location: 49139..52309
location: region:49139-52309:1
so has part: feature:49139-52309:1:exon
subclass of: SO_0000010

position:52309:1
position: 52309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49139-52309:1:exon

HQ394_RS19185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19185
old locus tag: HQ394_19340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008098670.1
GO component: GO:0016021 - integral component of membrane [Evidence IEA]
GO function: GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CusA/CzcA family heavy metal efflux RND transporter
translation: MKHFIYLTLANRLLIAVFVVGLIGAGLVSFRSLPVDAFPDVTPALVQVFTETEGLAPEEVERYVTFPVEVAMNGLPNLKQIRSTSNFGLSVVNIYFEDGTDIYFARQLVGERLQIAREEIPQGFGEPEMGPITTGLGQILFFFVADETGTRDLREVRETQDWIIKYNLQTVPGVTEVLSLGGEEKQYQVLVQPDALLRYKLTVNEVADAIAANNANVGAQSIVRNAELLVVRSVGLAGSIADIENIVVKVEDGTPIYVRDVAGVRIGGAPRQGLAALDGRGEAVAGLVLKLIDTNTSTVIDNVKKRLAEINTQLPKGLAVVPYYDQSVLVAKCIETVTSALLEGIVLVSLVLLVFLGAVRPALVVALSIPFCIAFTFLAMSVLGISANLMSXGGLAIAIGLLVDGSIVIVENIDRLLKAGHWTESKREIVARAAAEVLRPITFALIIIIVVFIPLFTLQGVEGKTFRPLAYTLALAMLGSLVFATLVTPVAAELLMRRPKPAGAGKDDPHDPWLVRRLLLAYRPLVTYFVGHRRAAIVLAVAILLGGGLVLPRIGSEFVPRLNEGDLLVRVTMAPSISLEEARDTVLRFEKRLMSSFPEVTRVVTRVGRGEVGAHADPINSAEAFVALKPQEEWTSADSPDALYAEMAEAFEDFPGAQFNFTQPIAAAVDELLTGTRAQLAVKLFGPDSDILQAKSAELEAIVRGIGGASDVQRDQLTGAPQLRIVIDRNAIARYGLNVDDVQAVLSTAVGGRQAGQVFEEVRRFDIVVRYVEKARATPEVIREIIVRTPRGEIVPLSQLAVIEEVIGPRQVTRENNQRFATVQANVRGRDIGSFVAEGKQIVAEKLRLPPGYFVEWGGQFELQEEANARFAVVIPLTLGLIFFLLFMNFGSLKSAGLIMLNIPLALVGGIVGLWITGQNLSVPASVGFIALFGIAVGNGMVLVTYLDQLVREGRSIDEASIEGGCLRFRPVLMTATAAMIGLVPLLFATGTGSEVQRPLATVVVGGLITATVLTLVVIPSIYKWFAVERDEDEIRGDSQAKSEPKRMVSHENVVA
SIO_010081: HQ394_RS19185
subclass of: SO_0000673
so part of: HQ394_RS19185
location: 49139..52309
location: region:49139-52309:1
so has part: feature:49139-52309:1:exon

WP_190263443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49139-52309:1:exon

HQ394_RS19190
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19190
old locus tag: HQ394_19345
so part of: sequence
location: 52353..52781
location: region:52353-52781:1
so has part: feature:52353-52781:1:exon
subclass of: SO_0000010

position:52353:1
position: 52353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52781:1
position: 52781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52353-52781:1:exon

HQ394_RS19190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19190
old locus tag: HQ394_19345
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRNLAAVLVCFFAFTVASCASSRINLTESGAVDVKIDDGPRSPVKYVDVYLDTDDDETVIRGKIYGTGVPHFETYGKHVHVTVISPDGQIVAEEQPRLIWRTSSKFRSATSHFTVRVPNPVPTGTVVDVVYHDAFHRSASAA
SIO_010081: HQ394_RS19190
subclass of: SO_0000673
so part of: HQ394_RS19190
location: 52353..52781
location: region:52353-52781:1
so has part: feature:52353-52781:1:exon

WP_190263444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52353-52781:1:exon

HQ394_RS19195
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19195
old locus tag: HQ394_19350
so part of: sequence
location: 52797..53750
location: region:52797-53750:1
so has part: feature:52797-53750:1:exon
subclass of: SO_0000010

position:52797:1
position: 52797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53750:1
position: 53750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52797-53750:1:exon

HQ394_RS19195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19195
old locus tag: HQ394_19350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016855514.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008324 - cation transmembrane transporter activity [Evidence IEA]; GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO process: GO:0006812 - cation transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation diffusion facilitator family transporter
translation: MEHGHRHDHRAGAAVSGVIGHRSGDGTTSDGERRVFWALLITASFMVAEVAGGIVSGSLALLADAGHMLTDAAALGLSWYAFRVSRRPSTPQHSYGQHRFQVLAALVNGATLIGIAVWIGIEAARRLFAPVEVLGGTMLVIALLGLATNIAAFVILHGGDRENLNVRGAALHVLGDLLGSVAAIVAAIVILLIGWTPIDPILSVLVALLIVRSAWSLIAKSWHVLMEGAPQDRDVAMLQLELARSVEGVLDVHHVHLWSLTPEKPLITLHANISEDADHDTVLHRLQDVLAEQYDLRHATIQLERAGCADHRGRHNQ
SIO_010081: HQ394_RS19195
subclass of: SO_0000673
so part of: HQ394_RS19195
location: 52797..53750
location: region:52797-53750:1
so has part: feature:52797-53750:1:exon

WP_190263445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52797-53750:1:exon

HQ394_RS19200
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19200
old locus tag: HQ394_19355
so part of: sequence
location: 53777..53944
location: region:53777-53944:1
so has part: feature:53777-53944:1:exon
subclass of: SO_0000010

position:53777:1
position: 53777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53944:1
position: 53944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53777-53944:1:exon

HQ394_RS19200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19200
old locus tag: HQ394_19355
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLALAIIGGSARNQRQFLLTFAANGGATMLTLAASLLANLASRSPSERFAHALCQ
SIO_010081: HQ394_RS19200
subclass of: SO_0000673
so part of: HQ394_RS19200
location: 53777..53944
location: region:53777-53944:1
so has part: feature:53777-53944:1:exon

WP_223292161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53777-53944:1:exon

HQ394_RS19205
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19205
old locus tag: HQ394_19360
so part of: sequence
location: complement(54093..55049)
location: region:54093-55049:-1
so has part: feature:54093-55049:-1:exon
subclass of: SO_0000010

position:54093:-1
position: 54093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55049:-1
position: 55049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54093-55049:-1:exon

HQ394_RS19205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19205
old locus tag: HQ394_19360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003584576.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MVDDITRTAGIDTGKDRLDVAVHGWGGPFAVENTPAGWQSLADRLSHEGAQRVGIEASGSYERGVARHLQAAGFTVVVLQPLQVRAFAKLHLRRAKSDRIDALLIAACTHVLDPRQTKPADPRLDGLSDQLTFVEQVEADIARLKTRLEHIRDERLRDIVIADIKRLRARRADELRRLIAALRSHADLAGRFDLMLSVPGIGERTALALVLRMPELGRVSREQAAALAGLAPFVQQSGRWTGETRIAGGRGRLRRSLYAAALPAAFRWNPALKALYRRLVERGKAHTVAVVACARQLLVFANTVVARGTPWTERPLTP
SIO_010081: HQ394_RS19205
subclass of: SO_0000673
so part of: HQ394_RS19205
location: complement(54093..55049)
location: region:54093-55049:-1
so has part: feature:54093-55049:-1:exon

WP_190263447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54093-55049:-1:exon

HQ394_RS19210
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19210
old locus tag: HQ394_19365
so part of: sequence
location: 55311..55982
location: region:55311-55982:1
so has part: feature:55311-55982:1:exon
subclass of: SO_0000010

position:55311:1
position: 55311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55982:1
position: 55982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55311-55982:1:exon

HQ394_RS19210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19210
old locus tag: HQ394_19365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014132723.1
GO component: GO:0016021 - integral component of membrane [Evidence IEA]
GO function: GO:0008324 - cation transmembrane transporter activity [Evidence IEA]
GO process: GO:0006812 - cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation transporter
translation: MSRNESQEGAMAAGSDESCGATDLVHTTLAYRRALWVVVLLNLVMGVAEMIGGFIAGSQALKADALDFLGDGLITLLGLLAIGWSLAWRARAALIQGVFLAALGIAVLAATAYRVLLLHIPEAEIMGVFGAIALAVNVAAAWVLVPHRKGDANVRAVWLFSRNDALGNVAVVIAAGLVAWTGTPWPDLAVAAIIAGLFLHSAWEIISHARADLVRWRPSSAAE
SIO_010081: HQ394_RS19210
subclass of: SO_0000673
so part of: HQ394_RS19210
location: 55311..55982
location: region:55311-55982:1
so has part: feature:55311-55982:1:exon

WP_223292170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55311-55982:1:exon

HQ394_RS19215
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19215
old locus tag: HQ394_19370
pseudo: true
so part of: sequence
location: complement(<56137..56475)
location: region:56137-56475:-1
so has part: feature:56137-56475:-1:exon
subclass of: SO_0000010

position:56137:-1
position: 56137
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:56475:-1
position: 56475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56137-56475:-1:exon

HQ394_RS19215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19215
old locus tag: HQ394_19370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015272183.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MerR family transcriptional regulator
SIO_010081: HQ394_RS19215
subclass of: SO_0000673
so part of: HQ394_RS19215
location: complement(<56137..56475)
location: region:56137-56475:-1
so has part: feature:56137-56475:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:56137-56475:-1:exon

HQ394_RS19220
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19220
old locus tag: HQ394_19375
so part of: sequence
location: 56855..57331
location: region:56855-57331:1
so has part: feature:56855-57331:1:exon
subclass of: SO_0000010

position:56855:1
position: 56855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57331:1
position: 57331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56855-57331:1:exon

HQ394_RS19220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19220
old locus tag: HQ394_19375
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLIDPVKEGEHSSTVKEIGCYATFAEAIAAGTDGAVILPESATPETITEADVAPAARRLIGIDYDGRSYTGATRSWFADDGCSDRRTFRANMPASFNNRLTSTRAFSGCRRNDSFSGFFQTGFVVRSFPNRAYIGDRLNNQTSSKRWSGDDCCDWCCR
SIO_010081: HQ394_RS19220
subclass of: SO_0000673
so part of: HQ394_RS19220
location: 56855..57331
location: region:56855-57331:1
so has part: feature:56855-57331:1:exon

WP_223292162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56855-57331:1:exon

HQ394_RS19230
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19230
old locus tag: HQ394_19385
so part of: sequence
location: 57705..57938
location: region:57705-57938:1
so has part: feature:57705-57938:1:exon
subclass of: SO_0000010

position:57705:1
position: 57705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57938:1
position: 57938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57705-57938:1:exon

HQ394_RS19230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19230
old locus tag: HQ394_19385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011504718.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKLLDQALEAARSLSPDAQDDIARVVLRLAGTDDEASPVELAPEERAAVAASKAAAARGEFATDEQVRAVWAKHGL
SIO_010081: HQ394_RS19230
subclass of: SO_0000673
so part of: HQ394_RS19230
location: 57705..57938
location: region:57705-57938:1
so has part: feature:57705-57938:1:exon

WP_190263452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57705-57938:1:exon

HQ394_RS19235
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19235
old locus tag: HQ394_19390
so part of: sequence
location: 57917..58228
location: region:57917-58228:1
so has part: feature:57917-58228:1:exon
subclass of: SO_0000010

position:57917:1
position: 57917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58228:1
position: 58228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57917-58228:1:exon

HQ394_RS19235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19235
old locus tag: HQ394_19390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011654593.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MGQTRLVKLRYTLPALADLSSILDYVAAHSPQGARRIRARIQTIIDLLLLHPHIGTRTDDPAIRRLTTTPYPYVVFYEATEAEIIIHAVRHAARDPSGMPGAA
SIO_010081: HQ394_RS19235
subclass of: SO_0000673
so part of: HQ394_RS19235
location: 57917..58228
location: region:57917-58228:1
so has part: feature:57917-58228:1:exon

WP_223292163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57917-58228:1:exon

HQ394_RS19240
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19240
old locus tag: HQ394_19395
so part of: sequence
location: complement(58580..58783)
location: region:58580-58783:-1
so has part: feature:58580-58783:-1:exon
subclass of: SO_0000010

position:58580:-1
position: 58580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58783:-1
position: 58783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58580-58783:-1:exon

HQ394_RS19240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19240
old locus tag: HQ394_19395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020820000.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVSDLDIYRAAQVLIREHGADAPIHAAMRHDELFEAGDLNGVAVWKRILRALDALLSKQPTGGGQLH
SIO_010081: HQ394_RS19240
subclass of: SO_0000673
so part of: HQ394_RS19240
location: complement(58580..58783)
location: region:58580-58783:-1
so has part: feature:58580-58783:-1:exon

WP_190263453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58580-58783:-1:exon

HQ394_RS19245
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19245
old locus tag: HQ394_19400
so part of: sequence
location: complement(58808..59839)
location: region:58808-59839:-1
so has part: feature:58808-59839:-1:exon
subclass of: SO_0000010

position:58808:-1
position: 58808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59839:-1
position: 59839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58808-59839:-1:exon

HQ394_RS19245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19245
old locus tag: HQ394_19400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004541786.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MDEASNLPEPTGRSVIRPAAPPIVVPALIAAAGEEAARHFINFFIASIRNRHTRRSYARQAELFLSWCQAHGLADIREVRTEHVAAYIERLSRSPLEAASVKQALSALRMLFSWLVVHQVVPQNPTASVRGPKLVVSEGKTPYLPPEDVVRLIDSIPADTLVGLRDRALIGVMAYSFARVGAAAGMNVGDYYPQGKQWSLRFKEKGGKRKQLAAHHKLEEYMDAYLTAAGIGEEKGAPIFRTARGKTGMLTGNRMTQSDAWRMLQRRARKAGVTTAVCNHSWRASGITVFLENGGSIEMAQYMAGHADPRTTKLYDRRRQVASVXEVERIRYEKTLPGPEPGE
SIO_010081: HQ394_RS19245
subclass of: SO_0000673
so part of: HQ394_RS19245
location: complement(58808..59839)
location: region:58808-59839:-1
so has part: feature:58808-59839:-1:exon

WP_190263454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58808-59839:-1:exon

HQ394_RS19250
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19250
old locus tag: HQ394_19405
so part of: sequence
location: 60087..60272
location: region:60087-60272:1
so has part: feature:60087-60272:1:exon
subclass of: SO_0000010

position:60087:1
position: 60087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60272:1
position: 60272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60087-60272:1:exon

HQ394_RS19250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19250
old locus tag: HQ394_19405
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEPPSFWYDRNFFASVEEALDFVRELLAVDVLLSDPDELGDVAPSPPAPQPKLRVIPGGRG
SIO_010081: HQ394_RS19250
subclass of: SO_0000673
so part of: HQ394_RS19250
location: 60087..60272
location: region:60087-60272:1
so has part: feature:60087-60272:1:exon

WP_190263455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60087-60272:1:exon

HQ394_RS19255
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19255
old locus tag: HQ394_19410
so part of: sequence
location: 60458..60625
location: region:60458-60625:1
so has part: feature:60458-60625:1:exon
subclass of: SO_0000010

position:60458:1
position: 60458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60625:1
position: 60625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60458-60625:1:exon

HQ394_RS19255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19255
old locus tag: HQ394_19410
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNFRPIDRDTGFLMPPSVDEWLPQRHAREQAEHDPELAARTAKTAATGKKPGGV
SIO_010081: HQ394_RS19255
subclass of: SO_0000673
so part of: HQ394_RS19255
location: 60458..60625
location: region:60458-60625:1
so has part: feature:60458-60625:1:exon

WP_190263456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60458-60625:1:exon

HQ394_RS19260
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19260
old locus tag: HQ394_19415
so part of: sequence
location: 60708..61238
location: region:60708-61238:1
so has part: feature:60708-61238:1:exon
subclass of: SO_0000010

position:60708:1
position: 60708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61238:1
position: 61238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60708-61238:1:exon

HQ394_RS19260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19260
old locus tag: HQ394_19415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014761918.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MRDMGAGVGMLXRLRDEAKAIRIFEDVVSGXDLERPGLATLLDYARADDIICVVRLDRLGRSLKELLETVDDFKKRGLEFRSLEERLDTASAAGELVFHVFGAIAHFERRLIVERTKDGIAAARSRGKRXSRPPLDEDKLAAAFALIDTGMRPAQVARQLGLGRSTLYRELACRPG
SIO_010081: HQ394_RS19260
subclass of: SO_0000673
so part of: HQ394_RS19260
location: 60708..61238
location: region:60708-61238:1
so has part: feature:60708-61238:1:exon

WP_190263498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60708-61238:1:exon

HQ394_RS19265
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19265
old locus tag: HQ394_19420
so part of: sequence
location: complement(61434..63845)
location: region:61434-63845:-1
so has part: feature:61434-63845:-1:exon
subclass of: SO_0000010

position:61434:-1
position: 61434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63845:-1
position: 63845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61434-63845:-1:exon

HQ394_RS19265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19265
old locus tag: HQ394_19420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012092676.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal translocating P-type ATPase
translation: MHKGSAQKPPASTKNDDRHQGITDRGHAGHGHLVADSRPSVATDPVCGMLVDPHTTPHRATRGGSASYFCSTGCQQKFEADPSRYLSPEQAKQSVEPVPEVTLYTCPMHPEVRQSAPGSCPICGMALEPLLVTADEGPSAELVDMTRRFWIGLVLTVPVFFLEMGGHLTSFTDAIGQQVSNWLQLVLATPVVLWAGWPFFVRGWRSVVSRQLNMFTLIALGTGAAWIYSMTATLAPGLFPPALRATDGAIPAYFEAAAVITVLVLLGQVLELKAREXTSGAIRALLDLAPKTARRLRADGNDEEVTLDRIGVGDRLRVRPGEKVPVDGEVVEGRCSVDESMVTGESMPVTKEPGSKAIAGTLNQTGSFVMRAEKVGRDTMLARIVQMVAEAQRSRAPIQRLADRVSGWFVPLVIAVALLAFAAWWVWGPEPRFSFALVSAVAVLIIACPCALGLATPMSIMVGVGRGAQAGVLIKNAEALERLERVDTLVVDKTGTLTEGKPKVTAVVPAPGLDEAELLRLAASVERASEHPLANAIVASATERNLALADVTDFDSPTGKGAVGTVDGWRVAIGNAGFLAENGVATGMLETEADRLRSEGATVVFVAVDGRAAGMVAIADPIKSTTPAALQALKAEGMCVVMLTGDNRRTADAVARKLGIDEVEAEVLPDQKSAVVERLKREGCTVAMAGDGVNDAPALAAADIGIAMGSGADVAIESAAVTLLRGDLAGIVRARRLSRATMRNIRQNLFFAFIYNAAGVPXAAGVLYPFLGLLLSPVVAAAAMALSSVSVIANALRLKVARL
SIO_010081: HQ394_RS19265
subclass of: SO_0000673
so part of: HQ394_RS19265
location: complement(61434..63845)
location: region:61434-63845:-1
so has part: feature:61434-63845:-1:exon

WP_190263457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61434-63845:-1:exon

HQ394_RS19270
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19270
old locus tag: HQ394_19425
so part of: sequence
location: complement(63907..67062)
location: region:63907-67062:-1
so has part: feature:63907-67062:-1:exon
subclass of: SO_0000010

position:63907:-1
position: 63907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67062:-1
position: 67062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63907-67062:-1:exon

HQ394_RS19270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19270
old locus tag: HQ394_19425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002436621.1
GO component: GO:0016021 - integral component of membrane [Evidence IEA]
GO function: GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CusA/CzcA family heavy metal efflux RND transporter
translation: MIASVIRWASHNLFLVLLGTVFIVAAGIYAVAKTPIDAIPDLSDVQVIVYTEFPGQAPQVVEDQVTFPLTTAMLAVPHSKVVRGFSMFGVSFVYIIFEDGTDIYWARSRVLEYLNFASGRLPRGVTPTLGPDATGVGWVFQYVVLSAKRTLAELRTLQDWYIRFALTKAQGVSEIASVGGFVKTYAITVDPLRLKAYGIPLADVIEAIRANNMDVGGRVVEMAETEYVVRGRGYLRGLGDLENVMLKTEGLTPVLLRDVARVELGPDERRGLAELNGQGEVVSGIAVQRYGENALNVIKNVKEKIAEIAPSLPEDIRIQSVYDRSEVIGRAIDTLKRTLIEESIIVALVCIVFLLHVRSAFVAIVMLPVGVLMAFIAMHALGINSTIMSLGXIAIAVGAMIDAAIVMIENAHKHLERAAPETPRLQVLVDSAIEVGPALFFSLLIITVSFLPIFTLEAQEGRLFKPLAYTKTFAMASAAFLSITLVPALMVLFVRGRILPEHKNPINRILIGVYRPVIRLVLRAKTLTILAAVAALGISIYPAVHIGSEFMPTLNEGTLLYMPATLPGLSITKATELVQKQNEIIKSFPEVDSVYGKAGRAATATDPAPLEMFETVINLKPESAWRDGMTTDKLIAEMDQALQFPGVSNAWTMPIKARIDMLSTGIRTPIGIKVYGPDLQGLEGLAREIEAVVRTVPGTTSAFAERVMGGYYLEIEPDRSALARYGLTVENVQEVVRTGLGADAVTTTVEGRERYTVNIRFPRAFRSSPQAIATDALIATPKGGTVPLGQVANVKLAKGPASIRTENAQLVVYIFVDFRDRDIGGYVADAQKAVAEKVRFPQGYYATWSGQFEYLQRAEARMKIVVPVTLAIIFLLLYLNFRRITETLIVMLALPFALIGGLWFVHGLGYNMSVAVAVGFIALAGVAAETGVIMLIYLDHAWAEIKRACAAEKRGPTRDDLARAIMIGAVERVRPKVMTVVAIMAGLLPILWSTGTGSEVMRRIAVPMIGGMVSSTVLTLVVIPAIYGLVKGWRLQPARETESKASAIGTA
SIO_010081: HQ394_RS19270
subclass of: SO_0000673
so part of: HQ394_RS19270
location: complement(63907..67062)
location: region:63907-67062:-1
so has part: feature:63907-67062:-1:exon

WP_223292171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63907-67062:-1:exon

HQ394_RS20315
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS20315
pseudo: true
so part of: sequence
location: complement(<67141..68043)
location: region:67141-68043:-1
so has part: feature:67141-68043:-1:exon
subclass of: SO_0000010

position:67141:-1
position: 67141
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:68043:-1
position: 68043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67141-68043:-1:exon

HQ394_RS20315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS20315
inference: COORDINATES: protein motif:HMM:TIGR01730.1
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: efflux RND transporter periplasmic adaptor subunit
SIO_010081: HQ394_RS20315
subclass of: SO_0000673
so part of: HQ394_RS20315
location: complement(<67141..68043)
location: region:67141-68043:-1
so has part: feature:67141-68043:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:67141-68043:-1:exon

HQ394_RS19275
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19275
old locus tag: HQ394_19435
so part of: sequence
location: complement(68553..69731)
location: region:68553-69731:-1
so has part: feature:68553-69731:-1:exon
subclass of: SO_0000010

position:68553:-1
position: 68553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69731:-1
position: 69731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68553-69731:-1:exon

HQ394_RS19275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19275
old locus tag: HQ394_19435
inference: COORDINATES: protein motif:HMM:NF014385.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TolC family protein
translation: MDELLAMARAMNPGLAAAALDAQAAQVRIGTTGRYPDPMFRTEFEDITGNGTRYAPDTLGRVKYTVEQTIPLWGKLDLQRKVAVAEAGAASEQRRTVENELAARIKTVFANAYATREAIRINEELLGAVAAIARVAQSRYAQGQGGQQDAVTAEVERGRLQAELARLDGERRNWNAQMNALLNRPVGAPLAPSQSLRPVPAPESIEIDQLLERAQRANPQLGIDAARITADERSAELVRRNWYPDLTLGVSVFDADSSSGREFGGYEAMVSFAIPLQWGLRRAQEGEAVARLAASRARRQATGLDLQSQIEAAYWALVSAERGERILRDINIPQSKVVLQSALAGYQLGRVELPTVLLAEQAVLRVALDRINLLIEQQVRLAEIERVIGEDL
SIO_010081: HQ394_RS19275
subclass of: SO_0000673
so part of: HQ394_RS19275
location: complement(68553..69731)
location: region:68553-69731:-1
so has part: feature:68553-69731:-1:exon

WP_190263459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68553-69731:-1:exon

HQ394_RS19280
type: Gene
subclass of: SO_0000704
RO_0002162: 111831
locus tag: HQ394_RS19280
old locus tag: HQ394_19440
so part of: sequence
location: complement(69889..70278)
location: region:69889-70278:-1
so has part: feature:69889-70278:-1:exon
subclass of: SO_0000010

position:69889:-1
position: 69889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70278:-1
position: 70278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69889-70278:-1:exon

HQ394_RS19280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111831
locus tag: HQ394_RS19280
old locus tag: HQ394_19440
inference: COORDINATES: protein motif:HMM:NF023390.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: STAS/SEC14 domain-containing protein
translation: MIAVEVESGTIVITMTGIVSDADWDAAVLALEEKLGGQASVHSTSAKFPKRHVLMDWEKLEGWEKGARSTCTWFCMGNQDMIERLAVIGDERWRDETERLVDIYKNAQINFYLPAQREHAKRWLRQSEE
SIO_010081: HQ394_RS19280
subclass of: SO_0000673
so part of: HQ394_RS19280
location: complement(69889..70278)
location: region:69889-70278:-1
so has part: feature:69889-70278:-1:exon

WP_190263460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69889-70278:-1:exon