Vibrio quintilis strain CECT 7734 chromosome 2, complete sequence.
Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.
Vibrio Clade 3.0: New Vibrionaceae Evolutionary Units Using Genome-Based Approach
DOI:10.1007/s00284-021-02725-0 Publication Status: Online-Only
Submitted (20-JUL-2021) Contact:Tomoo Sawabe Hokkaido University, Faculty of Fisheries Sciences; 3-1-1 Minato-cho, Hakodate, Hokkaido 041-8611, Japan
REFSEQ INFORMATION: The reference sequence is identical to\nAP024898.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler v. 0.4.7\nGenome Coverage :: 144x\nSequencing Technology :: Illumina MiSeq; Nanopore\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 09/30/2022 08:04:49\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 5,258\nCDSs (total) :: 5,146\nGenes (coding) :: 5,081\nCDSs (with protein) :: 5,081\nGenes (RNA) :: 112\nrRNAs :: 7, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 7, 7, 7 (5S, 16S, 23S)\ntRNAs :: 86\nncRNAs :: 5\nPseudo Genes (total) :: 65\nCDSs (without protein) :: 65\nPseudo Genes (ambiguous residues) :: 0 of 65\nPseudo Genes (frameshifted) :: 13 of 65\nPseudo Genes (incomplete) :: 55 of 65\nPseudo Genes (internal stop) :: 10 of 65\nPseudo Genes (multiple problems) :: 13 of 65\nCRISPR Arrays :: 7\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_004412853.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006959902.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: protein motif:HMM:NF016982.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000265351.1
COORDINATES: protein motif:HMM:NF027763.2
LapD/MoxY N-terminal periplasmic domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005522748.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0004733 - pyridoxamine-phosphate oxidase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002022747.1
formylglycine-generating enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002056445.1
COORDINATES: similar to AA sequence:RefSeq:WP_014164128.1
COORDINATES: similar to AA sequence:RefSeq:WP_019280780.1
GO:0003842 - 1-pyrroline-5-carboxylate dehydrogenase activity [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0004657 - proline dehydrogenase activity [Evidence IEA]
GO:0010133 - proline catabolic process to glutamate [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA
COORDINATES: similar to AA sequence:RefSeq:WP_013868197.1
COORDINATES: similar to AA sequence:RefSeq:WP_000431682.1
GO:0005298 - proline:sodium symporter activity [Evidence IEA]
GO:0015824 - proline transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001123609.1
COORDINATES: similar to AA sequence:RefSeq:WP_006879097.1
COORDINATES: similar to AA sequence:RefSeq:WP_020329679.1
COORDINATES: similar to AA sequence:RefSeq:WP_020334994.1
Fe(3+) dicitrate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014257766.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
iron chelate uptake ABC transporter family permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014257765.1
Fe(3+) dicitrate ABC transporter permease subunit FecD
COORDINATES: similar to AA sequence:RefSeq:WP_008079332.1
Fe(3+) dicitrate ABC transporter ATP-binding protein FecE
COORDINATES: similar to AA sequence:RefSeq:WP_017088784.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_000201205.1
COORDINATES: protein motif:HMM:NF020084.2
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000526404.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_004404986.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
type VI secretion system contractile sheath small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_010452458.1
GO:0033104 - type VI protein secretion system complex [Evidence IEA]
type VI secretion system contractile sheath large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_000221002.1
type VI secretion system baseplate subunit TssE
COORDINATES: similar to AA sequence:RefSeq:WP_019829524.1
type VI secretion system baseplate subunit TssF
COORDINATES: similar to AA sequence:RefSeq:WP_000510174.1
type VI secretion system baseplate subunit TssG
COORDINATES: similar to AA sequence:RefSeq:WP_005599440.1
type VI secretion system-associated FHA domain protein TagH
COORDINATES: similar to AA sequence:RefSeq:WP_019829522.1
type VI secretion system lipoprotein TssJ
COORDINATES: similar to AA sequence:RefSeq:WP_004727188.1
type VI secretion system baseplate subunit TssK
COORDINATES: similar to AA sequence:RefSeq:WP_017046816.1
type IVB secretion system protein IcmH/DotU
COORDINATES: similar to AA sequence:RefSeq:WP_009386354.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000084793.1
sigma-54 dependent transcriptional regulator
COORDINATES: protein motif:HMM:TIGR03360.1
type VI secretion system-associated protein VasI
COORDINATES: similar to AA sequence:RefSeq:WP_000426093.1
COORDINATES: similar to AA sequence:RefSeq:WP_000225016.1
type VI secretion system membrane subunit TssM
COORDINATES: protein motif:HMM:NF018516.2
type VI secretion system ImpA family N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_001069602.1
GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IEA]
GO:0019358 - nicotinate nucleotide salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000637377.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014204394.1
COORDINATES: similar to AA sequence:RefSeq:WP_016789656.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF003417.0
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: protein motif:HMM:NF025052.2
COORDINATES: protein motif:HMM:NF012869.2
COORDINATES: protein motif:HMM:NF027890.2
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_017026412.1
GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
DHA2 family efflux MFS transporter permease subunit
amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017634024.1
GO:0015173 - aromatic amino acid transmembrane transporter activity [Evidence IEA]
GO:0015801 - aromatic amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006880167.1
GO:0008770 - [acyl-carrier-protein] phosphodiesterase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012606.2
phosphatidylinositol-specific phospholipase C
COORDINATES: similar to AA sequence:RefSeq:WP_017447202.1
COORDINATES: protein motif:HMM:NF033516.0
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013677.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: protein motif:HMM:NF020795.2
COORDINATES: protein motif:HMM:TIGR00797.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020428910.1
COORDINATES: similar to AA sequence:RefSeq:WP_000064348.1
COORDINATES: protein motif:HMM:NF012873.2
amino acid adenylation domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017015238.1
COORDINATES: similar to AA sequence:RefSeq:WP_005597736.1
COORDINATES: similar to AA sequence:RefSeq:WP_017057379.1
COORDINATES: similar to AA sequence:RefSeq:WP_009601555.1
COORDINATES: protein motif:HMM:NF012512.2
COORDINATES: protein motif:HMM:NF013224.2
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004728108.1
COORDINATES: protein motif:HMM:NF024140.2
COORDINATES: similar to AA sequence:RefSeq:WP_011080170.1
undecaprenyl-phosphate glucose phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004726865.1
polysaccharide biosynthesis/export family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013571512.1
exopolysaccharide transport family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020432158.1
COORDINATES: similar to AA sequence:RefSeq:WP_012533484.1
COORDINATES: similar to AA sequence:RefSeq:WP_008076878.1
COORDINATES: similar to AA sequence:RefSeq:WP_004145810.1
COORDINATES: similar to AA sequence:RefSeq:WP_004726859.1
COORDINATES: similar to AA sequence:RefSeq:WP_008076885.1
COORDINATES: protein motif:HMM:NF018697.2
COORDINATES: similar to AA sequence:RefSeq:WP_012128765.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF027767.2
COORDINATES: similar to AA sequence:RefSeq:WP_000503164.1
COORDINATES: similar to AA sequence:RefSeq:WP_016798101.1
PTS lactose/cellobiose transporter subunit IIA
COORDINATES: similar to AA sequence:RefSeq:WP_006646746.1
COORDINATES: similar to AA sequence:RefSeq:WP_006646745.1
COORDINATES: similar to AA sequence:RefSeq:WP_004405541.1
COORDINATES: similar to AA sequence:RefSeq:WP_006228660.1
GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: protein motif:HMM:NF024770.2
COORDINATES: similar to AA sequence:RefSeq:WP_011081642.1
COORDINATES: similar to AA sequence:RefSeq:WP_000818300.1
COORDINATES: similar to AA sequence:RefSeq:WP_004727486.1
GO:0008926 - mannitol-1-phosphate 5-dehydrogenase activity [Evidence IEA]
GO:0019594 - mannitol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012126940.1
COORDINATES: similar to AA sequence:RefSeq:WP_010453831.1
COORDINATES: similar to AA sequence:RefSeq:WP_017036200.1
COORDINATES: similar to AA sequence:RefSeq:WP_017016497.1
COORDINATES: protein motif:HMM:NF012451.2
COORDINATES: similar to AA sequence:RefSeq:WP_002541212.1
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: similar to AA sequence:RefSeq:WP_017031934.1
COORDINATES: similar to AA sequence:RefSeq:WP_006075133.1
COORDINATES: similar to AA sequence:RefSeq:WP_004727157.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB
COORDINATES: protein motif:HMM:NF012920.2
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006711069.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: similar to AA sequence:RefSeq:WP_008075129.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008986 - pyruvate, water dikinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017422494.1
pyruvate, water dikinase regulatory protein
COORDINATES: protein motif:HMM:NF022633.2
COORDINATES: similar to AA sequence:RefSeq:WP_017042354.1
COORDINATES: similar to AA sequence:RefSeq:WP_013784548.1
COORDINATES: similar to AA sequence:RefSeq:WP_004746926.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019829891.1
COORDINATES: similar to AA sequence:RefSeq:WP_012534964.1
putative adenosine monophosphate-protein transferase Fic
COORDINATES: protein motif:HMM:NF022288.2
COORDINATES: protein motif:HMM:NF012245.2
COORDINATES: similar to AA sequence:RefSeq:WP_017110047.1
COORDINATES: similar to AA sequence:RefSeq:WP_004412573.1
COORDINATES: similar to AA sequence:RefSeq:WP_000605631.1
COORDINATES: protein motif:HMM:NF013340.2
YbhB/YbcL family Raf kinase inhibitor-like protein
COORDINATES: similar to AA sequence:RefSeq:WP_013868096.1
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004404329.1
GO:0015297 - antiporter activity [Evidence IEA]
GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: similar to AA sequence:RefSeq:WP_020431130.1
COORDINATES: similar to AA sequence:RefSeq:WP_004405344.1
COORDINATES: similar to AA sequence:RefSeq:WP_005392348.1
COORDINATES: similar to AA sequence:RefSeq:WP_005526461.1
COORDINATES: similar to AA sequence:RefSeq:WP_017087836.1
COORDINATES: protein motif:HMM:NF025675.2
COORDINATES: protein motif:HMM:NF024924.2
LysR substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR01194.1
GO:0016021 - integral component of membrane [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:1904680 - peptide transmembrane transporter activity [Evidence IEA]
GO:0015833 - peptide transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013579.2
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019823948.1
GO:0015666 - restriction endodeoxyribonuclease activity [Evidence IEA]; GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]; GO:0009307 - DNA restriction-modification system [Evidence IEA]
type I restriction-modification system subunit M
COORDINATES: protein motif:HMM:NF018009.2
PDDEXK nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004247678.1
COORDINATES: similar to AA sequence:RefSeq:WP_008218099.1
COORDINATES: similar to AA sequence:RefSeq:WP_017449159.1
GO:0019812 - type I site-specific deoxyribonuclease complex [Evidence IEA]
GO:0009035 - type I site-specific deoxyribonuclease activity [Evidence IEA]
GO:0009307 - DNA restriction-modification system [Evidence IEA]
HsdR family type I site-specific deoxyribonuclease
COORDINATES: similar to AA sequence:RefSeq:WP_017089030.1
SprT family zinc-dependent metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_017038008.1
COORDINATES: similar to AA sequence:RefSeq:WP_011074120.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF017020.2
COORDINATES: protein motif:HMM:NF013276.2
GO:0030599 - pectinesterase activity [Evidence IEA]
GO:0042545 - cell wall modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF022317.2
COORDINATES: protein motif:HMM:NF013777.2
COORDINATES: protein motif:HMM:NF013304.2
COORDINATES: similar to AA sequence:RefSeq:WP_009705720.1
COORDINATES: similar to AA sequence:RefSeq:WP_017449555.1
COORDINATES: similar to AA sequence:RefSeq:WP_006879611.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005396098.1
COORDINATES: protein motif:HMM:NF012550.2
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: similar to AA sequence:RefSeq:WP_017021001.1
COORDINATES: protein motif:HMM:NF013465.2
GO:0046872 - metal ion binding [Evidence IEA]
zinc ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004749157.1
COORDINATES: protein motif:HMM:NF023982.2
COORDINATES: similar to AA sequence:RefSeq:WP_005597866.1
COORDINATES: protein motif:HMM:NF019334.2
GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012708.2
COORDINATES: protein motif:HMM:NF024907.2
COORDINATES: similar to AA sequence:RefSeq:WP_017025769.1
COORDINATES: similar to AA sequence:RefSeq:WP_017092398.1
COORDINATES: similar to AA sequence:RefSeq:WP_001016204.1
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: similar to AA sequence:RefSeq:WP_017448932.1
iron-containing redox enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005504720.1
COORDINATES: similar to AA sequence:RefSeq:WP_017047059.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005464467.1
COORDINATES: similar to AA sequence:RefSeq:WP_000351949.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022465.2
COORDINATES: similar to AA sequence:RefSeq:WP_004742400.1
mechanosensitive ion channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020328880.1
COORDINATES: similar to AA sequence:RefSeq:WP_019824655.1
GO:0015297 - antiporter activity [Evidence IEA]; GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000487854.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
3-deoxy-7-phosphoheptulonate synthase AroG
COORDINATES: similar to AA sequence:RefSeq:WP_005522050.1
COORDINATES: similar to AA sequence:RefSeq:WP_001037564.1
COORDINATES: similar to AA sequence:RefSeq:WP_004408589.1
COORDINATES: similar to AA sequence:RefSeq:WP_000361704.1
COORDINATES: protein motif:HMM:NF013618.2
transglycosylase SLT domain-containing protein
COORDINATES: protein motif:HMM:NF019157.2
tannase/feruloyl esterase family alpha/beta hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_005535028.1
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_013320000.1
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: similar to AA sequence:RefSeq:WP_005431080.1
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_005464480.1
COORDINATES: protein motif:HMM:NF012706.2
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012738.2
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF005478.0
COORDINATES: protein motif:HMM:NF013696.2
COORDINATES: similar to AA sequence:RefSeq:WP_005598600.1
COORDINATES: protein motif:HMM:NF013884.2
COORDINATES: similar to AA sequence:RefSeq:WP_020196304.1
COORDINATES: similar to AA sequence:RefSeq:WP_020198001.1
COORDINATES: protein motif:HMM:NF024812.2
COORDINATES: similar to AA sequence:RefSeq:WP_004745664.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013867974.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
glycine betaine/L-proline ABC transporter substrate-binding protein ProX
COORDINATES: similar to AA sequence:RefSeq:WP_020429402.1
COORDINATES: similar to AA sequence:RefSeq:WP_013867973.1
glycine betaine/L-proline ABC transporter permease ProW
COORDINATES: similar to AA sequence:RefSeq:WP_013867972.1
GO:0031460 - glycine betaine transport [Evidence IEA]
glycine betaine/L-proline ABC transporter ATP-binding protein ProV
COORDINATES: similar to AA sequence:RefSeq:WP_009706360.1
COORDINATES: similar to AA sequence:RefSeq:WP_000422466.1
COORDINATES: similar to AA sequence:RefSeq:WP_000967513.1
COORDINATES: similar to AA sequence:RefSeq:WP_012600251.1
GO:0004359 - glutaminase activity [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0008795 - NAD+ synthase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004726956.1
nicotinate-nicotinamide nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_000362857.1
COORDINATES: similar to AA sequence:RefSeq:WP_000102967.1
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
GO:0006662 - glycerol ether metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020328418.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00050
FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF019130.2
alpha-glucuronidase family glycosyl hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_009385140.1
COORDINATES: similar to AA sequence:RefSeq:WP_015572255.1
COORDINATES: similar to AA sequence:RefSeq:WP_000886244.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016021 - integral component of membrane [Evidence IEA]
GO:0003333 - amino acid transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000569771.1
COORDINATES: similar to AA sequence:RefSeq:WP_010974830.1
histidine ABC transporter ATP-binding protein HisP
COORDINATES: protein motif:HMM:NF024242.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF016822.2
COORDINATES: similar to AA sequence:RefSeq:WP_017026524.1
GO:0008791 - arginine N-succinyltransferase activity [Evidence IEA]
GO:0006527 - arginine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_039554875.1
GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
succinylglutamate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_012534958.1
GO:0009015 - N-succinylarginine dihydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003706.0
GO:0009017 - succinylglutamate desuccinylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: protein motif:HMM:NF024377.2
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: protein motif:HMM:NF023580.2
COORDINATES: protein motif:HMM:NF024966.2
COORDINATES: similar to AA sequence:RefSeq:WP_008074214.1
COORDINATES: similar to AA sequence:RefSeq:WP_004736366.1
COORDINATES: similar to AA sequence:RefSeq:WP_004393842.1
GO:0008812 - choline dehydrogenase activity [Evidence IEA]
GO:0019285 - glycine betaine biosynthetic process from choline [Evidence IEA]
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF016817.2
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: similar to AA sequence:RefSeq:WP_019824538.1
COORDINATES: similar to AA sequence:RefSeq:WP_019824537.1
GO:0008802 - betaine-aldehyde dehydrogenase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019274369.1
COORDINATES: similar to AA sequence:RefSeq:WP_017021595.1
choline ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006961210.1
choline ABC transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012600073.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO:0015220 - choline transmembrane transporter activity [Evidence IEA]
GO:0015871 - choline transport [Evidence IEA]
choline ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF015347.2
BspA family leucine-rich repeat surface protein
COORDINATES: similar to AA sequence:RefSeq:WP_004747424.1
COORDINATES: similar to AA sequence:RefSeq:WP_017035177.1
COORDINATES: similar to AA sequence:RefSeq:WP_017033532.1
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: similar to AA sequence:RefSeq:WP_005374306.1
COORDINATES: similar to AA sequence:RefSeq:WP_007467140.1
COORDINATES: similar to AA sequence:RefSeq:WP_006072249.1
COORDINATES: protein motif:HMM:NF015500.2
COORDINATES: protein motif:HMM:NF024821.2
COORDINATES: protein motif:HMM:NF024883.2
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF038011.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007465664.1
COORDINATES: similar to AA sequence:RefSeq:WP_004743819.1
COORDINATES: similar to AA sequence:RefSeq:WP_017217706.1
COORDINATES: similar to AA sequence:RefSeq:WP_005504313.1
COORDINATES: similar to AA sequence:RefSeq:WP_016962401.1
COORDINATES: similar to AA sequence:RefSeq:WP_016962402.1
biotin-dependent carboxyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_000878542.1
COORDINATES: similar to AA sequence:RefSeq:WP_017040729.1
COORDINATES: similar to AA sequence:RefSeq:WP_017037645.1
COORDINATES: similar to AA sequence:RefSeq:WP_012549241.1
COORDINATES: similar to AA sequence:RefSeq:WP_019282541.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014068.2
COORDINATES: similar to AA sequence:RefSeq:WP_008042848.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_005483368.1
COORDINATES: similar to AA sequence:RefSeq:WP_004396389.1
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_017017376.1
GO:0050114 - myo-inosose-2 dehydratase activity [Evidence IEA]
GO:0019310 - inositol catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004396385.1
GO:0047590 - 5-dehydro-2-deoxygluconokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020334285.1
GO:0016823 - hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)
COORDINATES: similar to AA sequence:RefSeq:WP_002540155.1
GO:0016861 - intramolecular oxidoreductase activity, interconverting aldoses and ketoses [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017035263.1
COORDINATES: protein motif:HMM:NF022214.2
COORDINATES: similar to AA sequence:RefSeq:WP_020430339.1
COORDINATES: similar to AA sequence:RefSeq:WP_020328985.1
L-methionine/branched-chain amino acid transporter
COORDINATES: similar to AA sequence:RefSeq:WP_010451258.1
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: similar to AA sequence:RefSeq:WP_010319355.1
cytidine/deoxycytidylate deaminase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005479962.1
COORDINATES: similar to AA sequence:RefSeq:WP_004411395.1
COORDINATES: similar to AA sequence:RefSeq:WP_002052332.1
COORDINATES: similar to AA sequence:RefSeq:WP_000210005.1
GO:0004151 - dihydroorotase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017050318.1
hybrid-cluster NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_008080119.1
GO:0016746 - acyltransferase activity [Evidence IEA]
1-acyl-sn-glycerol-3-phosphate acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004737750.1
COORDINATES: similar to AA sequence:RefSeq:WP_005441132.1
COORDINATES: similar to AA sequence:RefSeq:WP_015312960.1
TetR/AcrR family transcriptional regulator
bifunctional diguanylate cyclase/phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_001284010.1
COORDINATES: protein motif:HMM:NF015077.2
COORDINATES: similar to AA sequence:RefSeq:WP_020335996.1
GO:0005275 - amine transmembrane transporter activity [Evidence IEA]
GO:0015837 - amine transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014234369.1
homocysteine S-methyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020431768.1
COORDINATES: similar to AA sequence:RefSeq:WP_020432920.1
COORDINATES: similar to AA sequence:RefSeq:WP_017080794.1
GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_001964589.1
GO:0017057 - 6-phosphogluconolactonase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020332475.1
GO:0004345 - glucose-6-phosphate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019275806.1
COORDINATES: protein motif:HMM:NF012754.2
COORDINATES: similar to AA sequence:RefSeq:WP_000376337.1
nucleoside transporter C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:NP_459923.1
COORDINATES: protein motif:HMM:NF020844.2
rhamnogalacturonan lyase B N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000926293.1
COORDINATES: similar to AA sequence:RefSeq:WP_008079762.1
GO:0008890 - glycine C-acetyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020332488.1
GO:0008743 - L-threonine 3-dehydrogenase activity [Evidence IEA]
GO:0006567 - threonine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001898375.1
COORDINATES: protein motif:HMM:NF013070.2
COORDINATES: similar to AA sequence:RefSeq:WP_020333168.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01995.1
GO:0015573 - beta-glucoside transmembrane transporter activity [Evidence IEA]
GO:0015759 - beta-glucoside transport [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
beta-glucoside-specific PTS transporter subunit IIABC
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006879127.1
COORDINATES: similar to AA sequence:RefSeq:WP_009843890.1
COORDINATES: protein motif:HMM:NF015536.2
GO:0070004 - cysteine-type exopeptidase activity [Evidence IEA]; GO:0016805 - dipeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014696.2
phosphatidylserine decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011074045.1
COORDINATES: protein motif:HMM:NF008277.0
COORDINATES: similar to AA sequence:RefSeq:WP_011217244.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0009045 - xylose isomerase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005364823.1
GO:0051119 - sugar transmembrane transporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: similar to AA sequence:RefSeq:WP_011218508.1
COORDINATES: similar to AA sequence:RefSeq:WP_010453367.1
Hcp family type VI secretion system effector
COORDINATES: protein motif:HMM:NF024799.2
sugar ABC transporter substrate-binding protein
HAMP domain-containing methyl-accepting chemotaxis protein
COORDINATES: similar to AA sequence:RefSeq:WP_011220607.1
COORDINATES: protein motif:HMM:NF013918.2
ferric reductase-like transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000547719.1
trans-2-enoyl-CoA reductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019829569.1
COORDINATES: similar to AA sequence:RefSeq:WP_001974927.1
COORDINATES: similar to AA sequence:RefSeq:WP_004727791.1
GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
cellulose binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000175421.1
COORDINATES: similar to AA sequence:RefSeq:WP_020430310.1
COORDINATES: similar to AA sequence:RefSeq:WP_016768092.1
COORDINATES: similar to AA sequence:RefSeq:WP_000941300.1
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013867937.1
COORDINATES: protein motif:HMM:NF017446.2
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_019829275.1
COORDINATES: similar to AA sequence:RefSeq:WP_004730049.1
COORDINATES: similar to AA sequence:RefSeq:WP_004743724.1
COORDINATES: similar to AA sequence:RefSeq:WP_009845674.1
COORDINATES: similar to AA sequence:RefSeq:WP_017058675.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013867910.1
LuxQ periplasmic sensor domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_001913458.1
COORDINATES: similar to AA sequence:RefSeq:WP_013867905.1
COORDINATES: similar to AA sequence:RefSeq:WP_001124246.1
COORDINATES: similar to AA sequence:RefSeq:WP_014257401.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005525749.1
GO:0008929 - methylglyoxal synthase activity [Evidence IEA]
GO:0019242 - methylglyoxal biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001154364.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_001906007.1
COORDINATES: similar to AA sequence:RefSeq:WP_009696222.1
COORDINATES: similar to AA sequence:RefSeq:WP_000786547.1
COORDINATES: similar to AA sequence:RefSeq:WP_009841020.1
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004726702.1
GO:0042619 - poly-hydroxybutyrate biosynthetic process [Evidence IEA]
class I poly(R)-hydroxyalkanoic acid synthase
COORDINATES: similar to AA sequence:RefSeq:WP_012905035.1
COORDINATES: similar to AA sequence:RefSeq:WP_017052798.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015313053.1
COORDINATES: similar to AA sequence:RefSeq:WP_009356026.1
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013868539.1
phosphate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_002042471.1
COORDINATES: protein motif:HMM:NF015803.2
ShlB/FhaC/HecB family hemolysin secretion/activation protein
COORDINATES: protein motif:HMM:NF024728.2
COORDINATES: similar to AA sequence:RefSeq:WP_011840001.1
COORDINATES: protein motif:HMM:NF022798.2
COORDINATES: similar to AA sequence:RefSeq:WP_019282658.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
group II intron reverse transcriptase/maturase
COORDINATES: similar to AA sequence:RefSeq:WP_005489630.1
COORDINATES: protein motif:HMM:NF015377.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
cysteine peptidase family C39 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_076612072.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF008629.1
GO:0004519 - endonuclease activity [Evidence IEA]
cleaves DNA at apurinic or apyrimidinic sites; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF025298.2
COORDINATES: similar to AA sequence:RefSeq:WP_010647262.1
COORDINATES: similar to AA sequence:RefSeq:WP_006069243.1
COORDINATES: similar to AA sequence:RefSeq:WP_014610166.1
COORDINATES: similar to AA sequence:RefSeq:WP_004746918.1
GO:0004096 - catalase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000278320.1
COORDINATES: similar to AA sequence:RefSeq:WP_017049170.1
COORDINATES: protein motif:HMM:NF015683.2
glutathionylspermidine synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010646651.1
COORDINATES: protein motif:HMM:NF022144.2
COORDINATES: protein motif:HMM:NF014325.2
COORDINATES: protein motif:HMM:NF021457.2
COORDINATES: protein motif:HMM:NF006386.0
acyl-[ACP]--phospholipid O-acyltransferase
COORDINATES: protein motif:HMM:NF007335.0
PTS beta-glucoside transporter subunit IIABC
COORDINATES: similar to AA sequence:RefSeq:WP_000643228.1
COORDINATES: protein motif:HMM:NF019491.2
COORDINATES: protein motif:HMM:NF005146.0
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
carboxymuconolactone decarboxylase family protein
COORDINATES: protein motif:HMM:NF014476.2
COORDINATES: protein motif:HMM:NF012363.2
COORDINATES: protein motif:HMM:NF018809.2
GO:0042597 - periplasmic space [Evidence IEA]
COORDINATES: protein motif:HMM:NF014335.2
GO:0015288 - porin activity [Evidence IEA]
GO:0034219 - carbohydrate transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005480178.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000805367.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_005374838.1
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF023085.2
COORDINATES: similar to AA sequence:RefSeq:WP_002541864.1
COORDINATES: protein motif:HMM:NF023175.2
COORDINATES: protein motif:HMM:NF037713.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012907.2
COORDINATES: protein motif:HMM:NF012234.2
COORDINATES: similar to AA sequence:RefSeq:WP_006958488.1
COORDINATES: similar to AA sequence:RefSeq:WP_006958487.1
COORDINATES: protein motif:HMM:NF014114.2
COORDINATES: protein motif:HMM:NF024811.2
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005459843.1
COORDINATES: protein motif:HMM:NF040105.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: protein motif:HMM:NF037889.2
COORDINATES: similar to AA sequence:RefSeq:WP_005398543.1
COORDINATES: protein motif:HMM:NF017528.2
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_006960640.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
maltose/maltodextrin ABC transporter ATP-binding protein MalK
COORDINATES: similar to AA sequence:RefSeq:WP_000786217.1
GO:0015144 - carbohydrate transmembrane transporter activity [Evidence IEA]
maltose/maltodextrin ABC transporter substrate-binding protein MalE
COORDINATES: similar to AA sequence:RefSeq:WP_008215800.1
COORDINATES: similar to AA sequence:RefSeq:WP_001252025.1
COORDINATES: protein motif:HMM:NF013395.2
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017634634.1
aspartate/glutamate racemase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_001047179.1
COORDINATES: similar to AA sequence:RefSeq:WP_012128126.1
COORDINATES: protein motif:HMM:TIGR00254.1
sensor domain-containing diguanylate cyclase
COORDINATES: similar to AA sequence:RefSeq:WP_008217765.1
COORDINATES: protein motif:HMM:NF012273.2
glutathione S-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017188648.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005526563.1
COORDINATES: similar to AA sequence:RefSeq:WP_000102411.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019276757.1
COORDINATES: similar to AA sequence:RefSeq:WP_001886822.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016159.2
COORDINATES: similar to AA sequence:RefSeq:WP_005376939.1
COORDINATES: similar to AA sequence:RefSeq:WP_017002867.1
COORDINATES: similar to AA sequence:RefSeq:WP_014232324.1
phage antirepressor KilAC domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017002860.1
COORDINATES: protein motif:HMM:NF028096.2
Ref family recombination enhancement nuclease
COORDINATES: protein motif:HMM:NF020354.2
COORDINATES: protein motif:HMM:TIGR02642.1
COORDINATES: similar to AA sequence:RefSeq:WP_000876718.1
COORDINATES: similar to AA sequence:RefSeq:WP_004734115.1
COORDINATES: similar to AA sequence:RefSeq:WP_017013539.1
COORDINATES: similar to AA sequence:RefSeq:WP_017002829.1
COORDINATES: similar to AA sequence:RefSeq:WP_011152165.1
COORDINATES: protein motif:HMM:NF019313.2
COORDINATES: protein motif:HMM:NF022642.2
COORDINATES: similar to AA sequence:RefSeq:WP_017013545.1
GO:0019028 - viral capsid [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017013547.1
COORDINATES: similar to AA sequence:RefSeq:WP_017013554.1
COORDINATES: protein motif:HMM:NF020885.2
COORDINATES: similar to AA sequence:RefSeq:WP_017013558.1
COORDINATES: similar to AA sequence:RefSeq:WP_017789231.1
COORDINATES: protein motif:HMM:TIGR03344.1
type VI secretion system tube protein TssD
COORDINATES: protein motif:HMM:NF023094.2
COORDINATES: protein motif:HMM:NF019500.2
COORDINATES: protein motif:HMM:NF037404.2
COORDINATES: protein motif:HMM:NF027292.2
COORDINATES: protein motif:HMM:NF014548.2
COORDINATES: similar to AA sequence:RefSeq:WP_004733492.1
COORDINATES: similar to AA sequence:RefSeq:WP_017013561.1
COORDINATES: similar to AA sequence:RefSeq:WP_009844342.1
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009704458.1
GO:0016790 - thiolester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000098128.1
COORDINATES: similar to AA sequence:RefSeq:WP_004728148.1
COORDINATES: similar to AA sequence:RefSeq:WP_019828971.1
bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_000717553.1
GO:0042834 - peptidoglycan binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019282713.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008716 - D-alanine-D-alanine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004411773.1
COORDINATES: similar to AA sequence:RefSeq:WP_004738001.1
stress response translation initiation inhibitor YciH
COORDINATES: protein motif:HMM:NF013166.2
COORDINATES: protein motif:HMM:NF012371.2
serine hydrolase domain-containing protein
COORDINATES: protein motif:HMM:NF016983.2
COORDINATES: protein motif:HMM:NF013324.2
hybrid non-ribosomal peptide synthetase/type I polyketide synthase
COORDINATES: protein motif:HMM:TIGR01536.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
asparagine synthase (glutamine-hydrolyzing)
COORDINATES: protein motif:HMM:NF018234.2
beta-ketoacyl synthase N-terminal-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000165866.1
GO:0009055 - electron transfer activity [Evidence IEA]
cytochrome b/b6 domain-containing protein
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: similar to AA sequence:RefSeq:WP_009846701.1
COORDINATES: similar to AA sequence:RefSeq:WP_004742722.1
COORDINATES: similar to AA sequence:RefSeq:WP_004742723.1
COORDINATES: similar to AA sequence:RefSeq:WP_009846696.1
COORDINATES: similar to AA sequence:RefSeq:WP_004737989.1
type IV secretory system conjugative DNA transfer family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017081564.1
COORDINATES: similar to AA sequence:RefSeq:WP_008221305.1
COORDINATES: similar to AA sequence:RefSeq:WP_016783619.1
COORDINATES: similar to AA sequence:RefSeq:WP_017191184.1
COORDINATES: similar to AA sequence:RefSeq:WP_009846689.1
COORDINATES: similar to AA sequence:RefSeq:WP_019274011.1
COORDINATES: similar to AA sequence:RefSeq:WP_019274015.1
COORDINATES: similar to AA sequence:RefSeq:WP_017045640.1
COORDINATES: similar to AA sequence:RefSeq:WP_005449723.1
COORDINATES: similar to AA sequence:RefSeq:WP_019820271.1
COORDINATES: protein motif:HMM:NF023792.2
COORDINATES: similar to AA sequence:RefSeq:WP_017633426.1
COORDINATES: protein motif:HMM:NF018642.2
COORDINATES: similar to AA sequence:RefSeq:WP_000512956.1
COORDINATES: similar to AA sequence:RefSeq:WP_002003155.1
GO:0006260 - DNA replication [Evidence IEA]
phage/plasmid replication protein, II/X family
COORDINATES: similar to AA sequence:RefSeq:WP_010645959.1
GO:0043867 - 7-cyano-7-deazaguanine tRNA-ribosyltransferase activity [Evidence IEA]; GO:0033739 - preQ1 synthase activity [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
NADPH-dependent 7-cyano-7-deazaguanine reductase QueF
COORDINATES: similar to AA sequence:RefSeq:WP_006961413.1
GO:1990397 - queuosine salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF024835.2
COORDINATES: similar to AA sequence:RefSeq:WP_010319488.1
COORDINATES: similar to AA sequence:RefSeq:WP_008076057.1
COORDINATES: similar to AA sequence:RefSeq:WP_005599733.1
COORDINATES: similar to AA sequence:RefSeq:WP_004411792.1
COORDINATES: similar to AA sequence:RefSeq:WP_009601533.1
GO:0008750 - NAD(P)+ transhydrogenase (AB-specific) activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
Re/Si-specific NAD(P)(+) transhydrogenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_019830217.1
GO:0008750 - NAD(P)+ transhydrogenase (AB-specific) activity [Evidence IEA]
Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_004731023.1
COORDINATES: similar to AA sequence:RefSeq:WP_008076064.1
late competence development ComFB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006072742.1
COORDINATES: similar to AA sequence:RefSeq:WP_011625997.1
COORDINATES: similar to AA sequence:RefSeq:WP_006230117.1
GO:0008797 - aspartate ammonia-lyase activity [Evidence IEA]
GO:0006520 - cellular amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006230118.1
COORDINATES: similar to AA sequence:RefSeq:WP_004728076.1
COORDINATES: similar to AA sequence:RefSeq:WP_006647668.1
COORDINATES: similar to AA sequence:RefSeq:WP_020333823.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0015689 - molybdate ion transport [Evidence IEA]
molybdenum ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_020333822.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]
molybdate ABC transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_020333821.1
GO:0031362 - anchored component of external side of plasma membrane [Evidence IEA]; GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0030973 - molybdate ion binding [Evidence IEA]
molybdate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_000019055.1
COORDINATES: similar to AA sequence:RefSeq:WP_001087678.1
COORDINATES: similar to AA sequence:RefSeq:WP_017045130.1
GO:0009279 - cell outer membrane [Evidence IEA]
efflux transporter outer membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_020428860.1
COORDINATES: similar to AA sequence:RefSeq:WP_004728114.1
GO:0008892 - guanine deaminase activity [Evidence IEA]
GO:0006147 - guanine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01334.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012129082.1
COORDINATES: protein motif:HMM:NF022745.2
COORDINATES: protein motif:HMM:NF012377.2
GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011081489.1
GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001895319.1
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]; GO:0032324 - molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020328695.1
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
molybdopterin-synthase adenylyltransferase MoeB
COORDINATES: similar to AA sequence:RefSeq:WP_004396637.1
COORDINATES: similar to AA sequence:RefSeq:WP_005396112.1
COORDINATES: similar to AA sequence:RefSeq:WP_009704058.1
GO:0004801 - transaldolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017108122.1
GO:0004802 - transketolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013867846.1
COORDINATES: similar to AA sequence:RefSeq:WP_016768133.1
FKBP-type peptidyl-prolyl cis-trans isomerase
COORDINATES: protein motif:HMM:NF019874.2
COORDINATES: similar to AA sequence:RefSeq:WP_006231330.1
COORDINATES: similar to AA sequence:RefSeq:WP_011217992.1
COORDINATES: similar to AA sequence:RefSeq:WP_006231332.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
AmmeMemoRadiSam system radical SAM enzyme
COORDINATES: protein motif:HMM:TIGR02073.1
GO:0009274 - peptidoglycan-based cell wall [Evidence IEA]
GO:0003824 - catalytic activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019323.2
GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001255016.1
bifunctional UDP-sugar hydrolase/5'-nucleotidase
COORDINATES: similar to AA sequence:RefSeq:WP_005524618.1
COORDINATES: similar to AA sequence:RefSeq:WP_017686378.1
COORDINATES: similar to AA sequence:RefSeq:WP_008076003.1
GO:0015499 - formate transmembrane transporter activity [Evidence IEA]
GO:0015724 - formate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012859.2
ricin-type beta-trefoil lectin domain protein
COORDINATES: similar to AA sequence:RefSeq:WP_005395526.1
COORDINATES: similar to AA sequence:RefSeq:WP_009841235.1
COORDINATES: similar to AA sequence:RefSeq:WP_001924096.1
COORDINATES: similar to AA sequence:RefSeq:WP_000799774.1
COORDINATES: similar to AA sequence:RefSeq:WP_004743355.1
COORDINATES: similar to AA sequence:RefSeq:WP_017039051.1
COORDINATES: similar to AA sequence:RefSeq:WP_019274693.1
microcin C ABC transporter permease YejB
COORDINATES: similar to AA sequence:RefSeq:WP_010320467.1
COORDINATES: protein motif:HMM:NF019322.2
COORDINATES: similar to AA sequence:RefSeq:WP_005432507.1
GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014257239.1
COORDINATES: similar to AA sequence:RefSeq:WP_000803880.1
COORDINATES: similar to AA sequence:RefSeq:WP_007463166.1
PAS domain-containing methyl-accepting chemotaxis protein
COORDINATES: similar to AA sequence:RefSeq:WP_010320314.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0009750 - response to fructose [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010649350.1
fused PTS fructose transporter subunit IIA/HPr protein
COORDINATES: similar to AA sequence:RefSeq:WP_017050019.1
GO:0008662 - 1-phosphofructokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005431388.1
GO:0022877 - protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity [Evidence IEA]; GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017434.2
COORDINATES: similar to AA sequence:RefSeq:WP_005446889.1
COORDINATES: similar to AA sequence:RefSeq:WP_001888349.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0043365 - [formate-C-acetyltransferase]-activating enzyme activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase-activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_019275881.1
GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase
COORDINATES: protein motif:HMM:NF024410.2
COORDINATES: protein motif:HMM:NF018431.2
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: similar to AA sequence:RefSeq:WP_076612097.1
COORDINATES: protein motif:HMM:NF013989.2
COORDINATES: similar to AA sequence:RefSeq:WP_000291346.1
GO:0045127 - N-acetylglucosamine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000873314.1
COORDINATES: similar to AA sequence:RefSeq:WP_014257541.1
COORDINATES: similar to AA sequence:RefSeq:WP_014257542.1
COORDINATES: similar to AA sequence:RefSeq:WP_009846229.1
GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017074505.1
GO:0022877 - protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity [Evidence IEA]
fructose-specific PTS transporter subunit EIIC
COORDINATES: similar to AA sequence:RefSeq:WP_000575418.1
COORDINATES: similar to AA sequence:RefSeq:WP_006711601.1
COORDINATES: similar to AA sequence:RefSeq:WP_000706150.1
COORDINATES: similar to AA sequence:RefSeq:WP_020432878.1
COORDINATES: protein motif:HMM:NF024996.2
COORDINATES: protein motif:HMM:NF012548.2
COORDINATES: protein motif:HMM:NF024921.2
COORDINATES: protein motif:HMM:NF012673.2
COORDINATES: protein motif:HMM:NF012742.2
COORDINATES: similar to AA sequence:RefSeq:WP_008072652.1
COORDINATES: similar to AA sequence:RefSeq:WP_000569777.1
COORDINATES: similar to AA sequence:RefSeq:WP_000773470.1
COORDINATES: similar to AA sequence:RefSeq:WP_000021873.1
COORDINATES: similar to AA sequence:RefSeq:WP_000111640.1
COORDINATES: similar to AA sequence:RefSeq:WP_014257545.1
COORDINATES: similar to AA sequence:RefSeq:WP_014257546.1
COORDINATES: similar to AA sequence:RefSeq:WP_004726975.1
COORDINATES: similar to AA sequence:RefSeq:WP_000886227.1
COORDINATES: protein motif:HMM:NF016726.2
COORDINATES: similar to AA sequence:RefSeq:WP_000003713.1
COORDINATES: similar to AA sequence:RefSeq:WP_000482741.1
COORDINATES: similar to AA sequence:RefSeq:WP_001908858.1
COORDINATES: similar to AA sequence:RefSeq:WP_000486272.1
COORDINATES: protein motif:HMM:NF005762.0
COORDINATES: protein motif:HMM:NF039614.1
COORDINATES: similar to AA sequence:RefSeq:WP_004543218.1
COORDINATES: protein motif:HMM:NF022590.2
COORDINATES: similar to AA sequence:RefSeq:WP_009600256.1
COORDINATES: similar to AA sequence:RefSeq:WP_011149165.1
COORDINATES: protein motif:HMM:TIGR03127.1
GO:0016853 - isomerase activity [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03128.1
GO:0043801 - hexulose-6-phosphate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012579.2
COORDINATES: similar to AA sequence:RefSeq:WP_010744424.1
COORDINATES: protein motif:HMM:NF012599.2
COORDINATES: protein motif:HMM:NF012385.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma-54-dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF014368.2
COORDINATES: similar to AA sequence:RefSeq:WP_017189936.1
COORDINATES: similar to AA sequence:RefSeq:WP_017189934.1
COORDINATES: similar to AA sequence:RefSeq:WP_017189933.1
COORDINATES: similar to AA sequence:RefSeq:WP_011080983.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020196678.1
COORDINATES: similar to AA sequence:RefSeq:WP_016789038.1
COORDINATES: similar to AA sequence:RefSeq:WP_009841186.1
COORDINATES: similar to AA sequence:RefSeq:WP_014234203.1
COORDINATES: similar to AA sequence:RefSeq:WP_019282045.1
COORDINATES: similar to AA sequence:RefSeq:WP_017789178.1
COORDINATES: similar to AA sequence:RefSeq:WP_005512150.1
GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017049599.1
COORDINATES: similar to AA sequence:RefSeq:WP_009356043.1
COORDINATES: similar to AA sequence:RefSeq:WP_004743757.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_007466160.1
pyridine nucleotide-disulfide oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_004411644.1
COORDINATES: protein motif:HMM:NF024573.2
COORDINATES: similar to AA sequence:RefSeq:WP_011150495.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612150.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_016788084.1
ADP-ribosylglycohydrolase family protein
COORDINATES: protein motif:HMM:NF015397.2
relaxase/mobilization nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_076612152.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF037432.2
HEPN/Toprim-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011218533.1
COORDINATES: protein motif:HMM:NF024491.2
COORDINATES: similar to AA sequence:RefSeq:WP_019282691.1
COORDINATES: similar to AA sequence:RefSeq:WP_019282690.1
COORDINATES: similar to AA sequence:RefSeq:WP_019282689.1
COORDINATES: similar to AA sequence:RefSeq:WP_019282688.1
COORDINATES: protein motif:HMM:NF012464.2
COORDINATES: similar to AA sequence:RefSeq:WP_000161816.1
COORDINATES: similar to AA sequence:RefSeq:WP_006880648.1
COORDINATES: similar to AA sequence:RefSeq:WP_009387288.1
COORDINATES: similar to AA sequence:RefSeq:WP_020432556.1
GO:0043752 - adenosylcobinamide kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004413840.1
GO:0051073 - adenosylcobinamide-GDP ribazoletransferase activity [Evidence IEA]
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: similar to AA sequence:RefSeq:WP_017085104.1
GO:0008939 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity [Evidence IEA]
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
COORDINATES: protein motif:HMM:NF015187.2
COORDINATES: protein motif:HMM:NF013933.2
COORDINATES: similar to AA sequence:RefSeq:WP_019830223.1
COORDINATES: similar to AA sequence:RefSeq:WP_004741860.1
COORDINATES: protein motif:HMM:NF015763.2
COORDINATES: protein motif:HMM:NF017985.2
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: similar to AA sequence:RefSeq:WP_014611609.1
COORDINATES: protein motif:HMM:NF016144.2
COORDINATES: similar to AA sequence:RefSeq:WP_014234134.1
COORDINATES: similar to AA sequence:RefSeq:WP_006880257.1
COORDINATES: similar to AA sequence:RefSeq:WP_012841855.1
COORDINATES: similar to AA sequence:RefSeq:WP_017788918.1
COORDINATES: similar to AA sequence:RefSeq:WP_017109195.1
phosphate-starvation-inducible PsiE family protein
COORDINATES: protein motif:HMM:NF015563.2
GO:0015558 - secondary active p-aminobenzoyl-glutamate transmembrane transporter activity [Evidence IEA]
GO:1902604 - p-aminobenzoyl-glutamate transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF019607.2
COORDINATES: similar to AA sequence:RefSeq:WP_006957636.1
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004727099.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004727831.1
GO:0016668 - oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor [Evidence IEA]
GO:0009398 - FMN biosynthetic process [Evidence IEA]; GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017629768.1
GO:0102039 - NADH-dependent peroxiredoxin activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005368280.1
COORDINATES: similar to AA sequence:RefSeq:WP_005368279.1
COORDINATES: protein motif:HMM:NF013227.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_017088779.1
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:NF014608.2
COORDINATES: protein motif:HMM:TIGR01909.1
COORDINATES: similar to AA sequence:RefSeq:WP_012842127.1
COORDINATES: protein motif:HMM:NF020455.2
COORDINATES: protein motif:HMM:NF025078.2
COORDINATES: protein motif:HMM:NF037034.2
COORDINATES: protein motif:HMM:NF019126.2
COORDINATES: protein motif:HMM:NF015338.2
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012127499.1
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017400897.1
COORDINATES: similar to AA sequence:RefSeq:WP_013661810.1
COORDINATES: similar to AA sequence:RefSeq:WP_019277208.1
COORDINATES: similar to AA sequence:RefSeq:WP_004394414.1
GO:0051060 - pullulanase activity [Evidence IEA]
GO:0051678 - pullulan catabolic process [Evidence IEA]; GO:0005983 - starch catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012759.2
COORDINATES: protein motif:HMM:NF012488.2
COORDINATES: protein motif:HMM:NF013738.2
iron-sulfur cluster assembly scaffold protein
COORDINATES: protein motif:HMM:NF016338.2
COORDINATES: similar to AA sequence:RefSeq:WP_017818708.1
COORDINATES: similar to AA sequence:RefSeq:WP_017821083.1
GO:0008859 - exoribonuclease II activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005378200.1
COORDINATES: protein motif:HMM:NF027363.2
GO:0016872 - intramolecular lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022537.2
COORDINATES: similar to AA sequence:RefSeq:WP_006074086.1
cyclopropane-fatty-acyl-phospholipid synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020330193.1
COORDINATES: similar to AA sequence:RefSeq:WP_014204876.1
COORDINATES: similar to AA sequence:RefSeq:WP_005304845.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_006881180.1
COORDINATES: protein motif:HMM:NF016807.2
COORDINATES: protein motif:HMM:NF019236.2
COORDINATES: protein motif:HMM:NF015585.2
COORDINATES: similar to AA sequence:RefSeq:WP_017010771.1
COORDINATES: similar to AA sequence:RefSeq:WP_002540167.1
COORDINATES: similar to AA sequence:RefSeq:WP_005433312.1
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017819872.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: protein motif:HMM:NF016876.2
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: protein motif:HMM:NF015640.2
GO:0051983 - regulation of chromosome segregation [Evidence IEA]
type II toxin-antitoxin system ParD family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_005511270.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type I-F CRISPR-associated endonuclease Cas1f
COORDINATES: protein motif:HMM:TIGR02562.1
GO:0004386 - helicase activity [Evidence IEA]
type I-F CRISPR-associated helicase Cas3f
COORDINATES: protein motif:HMM:TIGR02564.1
COORDINATES: similar to AA sequence:RefSeq:WP_017004727.1
COORDINATES: similar to AA sequence:RefSeq:WP_017004726.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
type I-F CRISPR-associated endoribonuclease Cas6/Csy4
COORDINATES: similar to AA sequence:RefSeq:WP_002541390.1
GO:0003950 - NAD+ ADP-ribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009846872.1
COORDINATES: similar to AA sequence:RefSeq:WP_016792414.1
GO:0008324 - cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
CDF family Co(II)/Ni(II) efflux transporter DmeF
COORDINATES: protein motif:HMM:NF023010.2
COORDINATES: similar to AA sequence:RefSeq:WP_006230008.1
COORDINATES: similar to AA sequence:RefSeq:WP_006961579.1
COORDINATES: similar to AA sequence:RefSeq:WP_010644533.1
COORDINATES: similar to AA sequence:RefSeq:WP_017899820.1
COORDINATES: protein motif:HMM:NF015925.2
COORDINATES: similar to AA sequence:RefSeq:WP_004396981.1
GO:0015116 - sulfate transmembrane transporter activity [Evidence IEA]
GO:0008272 - sulfate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010450729.1
COORDINATES: similar to AA sequence:RefSeq:WP_008989480.1
GO:0009166 - nucleotide catabolic process [Evidence IEA]
5'-nucleotidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005364693.1
COORDINATES: similar to AA sequence:RefSeq:WP_017035269.1
COORDINATES: similar to AA sequence:RefSeq:WP_009602955.1
COORDINATES: similar to AA sequence:RefSeq:WP_019821688.1
COORDINATES: similar to AA sequence:RefSeq:WP_006958453.1
COORDINATES: similar to AA sequence:RefSeq:WP_020429517.1
COORDINATES: similar to AA sequence:RefSeq:WP_014257935.1
COORDINATES: similar to AA sequence:RefSeq:WP_020194263.1
type II toxin-antitoxin system VapB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_010970128.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_011080929.1
COORDINATES: similar to AA sequence:RefSeq:WP_010319701.1
COORDINATES: protein motif:HMM:NF024917.2
COORDINATES: similar to AA sequence:RefSeq:WP_014333851.1
COORDINATES: protein motif:HMM:TIGR01594.1
COORDINATES: similar to AA sequence:RefSeq:WP_017007971.1
COORDINATES: protein motif:HMM:TIGR01274.1
GO:0008660 - 1-aminocyclopropane-1-carboxylate deaminase activity [Evidence IEA]
GO:0042217 - 1-aminocyclopropane-1-carboxylate catabolic process [Evidence IEA]
1-aminocyclopropane-1-carboxylate deaminase
COORDINATES: protein motif:HMM:NF012311.2
COORDINATES: similar to AA sequence:RefSeq:WP_004405305.1
L-tyrosine/L-tryptophan isonitrile synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017043227.1
COORDINATES: similar to AA sequence:RefSeq:WP_004737524.1
COORDINATES: similar to AA sequence:RefSeq:WP_006230183.1
COORDINATES: similar to AA sequence:RefSeq:WP_017017279.1
COORDINATES: similar to AA sequence:RefSeq:WP_009385585.1
COORDINATES: similar to AA sequence:RefSeq:WP_013867849.1
beta-phosphoglucomutase family hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_004728232.1
COORDINATES: similar to AA sequence:RefSeq:WP_011080768.1
GO:0000286 - alanine dehydrogenase activity [Evidence IEA]
GO:0006522 - alanine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004733517.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012550352.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001894072.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010319593.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017071609.1
COORDINATES: similar to AA sequence:RefSeq:WP_004404621.1
metal ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005364560.1
COORDINATES: similar to AA sequence:RefSeq:WP_005533697.1
COORDINATES: similar to AA sequence:RefSeq:WP_008989527.1
COORDINATES: similar to AA sequence:RefSeq:WP_004727753.1
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011080017.1
COORDINATES: similar to AA sequence:RefSeq:WP_005452244.1
GO:0004747 - ribokinase activity [Evidence IEA]
GO:0006014 - D-ribose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008079983.1
ribose ABC transporter substrate-binding protein RbsB
COORDINATES: similar to AA sequence:RefSeq:WP_005363945.1
COORDINATES: similar to AA sequence:RefSeq:WP_009844906.1
ribose ABC transporter ATP-binding protein RbsA
COORDINATES: similar to AA sequence:RefSeq:WP_005463700.1
COORDINATES: similar to AA sequence:RefSeq:WP_004395341.1
COORDINATES: similar to AA sequence:RefSeq:WP_005463889.1
COORDINATES: similar to AA sequence:RefSeq:WP_011106233.1
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: protein motif:HMM:NF012875.2
COORDINATES: similar to AA sequence:RefSeq:WP_006714653.1
COORDINATES: similar to AA sequence:RefSeq:WP_006879130.1
membrane protein insertion efficiency factor YidD
COORDINATES: similar to AA sequence:RefSeq:WP_005447484.1
COORDINATES: protein motif:HMM:NF019474.2
COORDINATES: similar to AA sequence:RefSeq:WP_004204513.1
COORDINATES: similar to AA sequence:RefSeq:WP_020194919.1
COORDINATES: protein motif:HMM:NF016658.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00167
purine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_017095778.1
GO:0004000 - adenosine deaminase activity [Evidence IEA]
GO:0043101 - purine-containing compound salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF013672.2
polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:NF012863.2
COORDINATES: similar to AA sequence:RefSeq:WP_009695901.1
COORDINATES: protein motif:HMM:NF021358.2
COORDINATES: similar to AA sequence:RefSeq:WP_017078156.1
COORDINATES: protein motif:HMM:NF024627.2
right-handed parallel beta-helix repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007461436.1
COORDINATES: similar to AA sequence:RefSeq:WP_006881118.1
COORDINATES: similar to AA sequence:RefSeq:WP_005471220.1
COORDINATES: similar to AA sequence:RefSeq:WP_005454218.1
COORDINATES: similar to AA sequence:RefSeq:WP_004396624.1
COORDINATES: protein motif:HMM:NF012318.2
COORDINATES: similar to AA sequence:RefSeq:WP_013868479.1
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
GO:0006546 - glycine catabolic process [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: similar to AA sequence:RefSeq:WP_008216960.1
COORDINATES: similar to AA sequence:RefSeq:WP_000361810.1
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019281004.1
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase
COORDINATES: protein motif:HMM:NF025769.2
COORDINATES: similar to AA sequence:RefSeq:WP_004413742.1
COORDINATES: similar to AA sequence:RefSeq:WP_008072904.1
COORDINATES: similar to AA sequence:RefSeq:WP_014234145.1
COORDINATES: similar to AA sequence:RefSeq:WP_020334809.1
COORDINATES: similar to AA sequence:RefSeq:WP_012842196.1
COORDINATES: similar to AA sequence:RefSeq:WP_020334811.1
TRAP transporter substrate-binding protein DctP
COORDINATES: similar to AA sequence:RefSeq:WP_016800857.1
COORDINATES: similar to AA sequence:RefSeq:WP_016800858.1
COORDINATES: similar to AA sequence:RefSeq:WP_020334813.1
COORDINATES: similar to AA sequence:RefSeq:WP_014234152.1
COORDINATES: protein motif:HMM:NF016701.2
GO:0016846 - carbon-sulfur lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017039705.1
COORDINATES: similar to AA sequence:RefSeq:WP_001915651.1
toll/interleukin-1 receptor domain-containing protein
COORDINATES: protein motif:HMM:NF024886.2
GO:0015074 - DNA integration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016960018.1
COORDINATES: similar to AA sequence:RefSeq:WP_005526585.1
COORDINATES: similar to AA sequence:RefSeq:WP_006963187.1
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: protein motif:HMM:NF024212.2
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014234020.1
COORDINATES: protein motif:HMM:NF012422.2
LuxR C-terminal-related transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007465235.1
COORDINATES: similar to AA sequence:RefSeq:WP_006230158.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_007465232.1
COORDINATES: protein motif:HMM:NF013188.2
COORDINATES: protein motif:HMM:NF025217.2
methyltransferase domain-containing protein
COORDINATES: protein motif:HMM:TIGR04282.1
GO:0016740 - transferase activity [Evidence IEA]
TIGR04282 family arsenosugar biosynthesis glycosyltransferase
COORDINATES: protein motif:HMM:TIGR04283.1
TIGR04283 family arsenosugar biosynthesis glycosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_017004006.1
COORDINATES: similar to AA sequence:RefSeq:WP_012550267.1
Some members of this family are selenoproteins; Derived by automated computational analysis using gene prediction method: Protein Homology.
arsenosugar biosynthesis radical SAM protein ArsS
COORDINATES: protein motif:HMM:TIGR01694.1
GO:0017061 - S-methyl-5-thioadenosine phosphorylase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]; GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: similar to AA sequence:RefSeq:WP_012603638.1
COORDINATES: similar to AA sequence:RefSeq:WP_017094433.1
COORDINATES: similar to AA sequence:RefSeq:WP_001911307.1
COORDINATES: similar to AA sequence:RefSeq:WP_017037035.1
Fe2+-enterobactin ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004396299.1
COORDINATES: similar to AA sequence:RefSeq:WP_004411337.1
COORDINATES: similar to AA sequence:RefSeq:WP_004726928.1
COORDINATES: similar to AA sequence:RefSeq:WP_012533352.1
COORDINATES: protein motif:HMM:NF012993.2
nitrilase-related carbon-nitrogen hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_001913254.1
LysR family transcriptional regulator ArgP
COORDINATES: similar to AA sequence:RefSeq:WP_000490471.1
COORDINATES: similar to AA sequence:RefSeq:WP_004726931.1
COORDINATES: similar to AA sequence:RefSeq:WP_017008406.1
COORDINATES: similar to AA sequence:RefSeq:WP_009600283.1
COORDINATES: similar to AA sequence:RefSeq:WP_006878737.1
COORDINATES: similar to AA sequence:RefSeq:WP_020336410.1
COORDINATES: similar to AA sequence:RefSeq:WP_019281459.1
COORDINATES: similar to AA sequence:RefSeq:WP_004727245.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031681.1
COORDINATES: similar to AA sequence:RefSeq:WP_006230133.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF021982.2
COORDINATES: similar to AA sequence:RefSeq:WP_004407474.1
COORDINATES: similar to AA sequence:RefSeq:WP_020333748.1
GO:0008795 - NAD+ synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016958573.1
COORDINATES: similar to AA sequence:RefSeq:WP_004741066.1
COORDINATES: protein motif:HMM:NF020904.2
COORDINATES: similar to AA sequence:RefSeq:WP_017096343.1
COORDINATES: similar to AA sequence:RefSeq:WP_000758146.1
COORDINATES: similar to AA sequence:RefSeq:WP_001881563.1
COORDINATES: similar to AA sequence:RefSeq:WP_001278800.1
COORDINATES: similar to AA sequence:RefSeq:WP_011150668.1
DDE-type integrase/transposase/recombinase
COORDINATES: similar to AA sequence:RefSeq:WP_001094671.1
COORDINATES: similar to AA sequence:RefSeq:WP_011150671.1
COORDINATES: protein motif:HMM:NF020345.2
Mor transcription activator family protein
COORDINATES: protein motif:HMM:NF040129.1
COORDINATES: similar to AA sequence:RefSeq:WP_012550614.1
Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014234403.1
COORDINATES: similar to AA sequence:RefSeq:WP_017053822.1
COORDINATES: similar to AA sequence:RefSeq:WP_008989436.1
GO:0047304 - 2-aminoethylphosphonate-pyruvate transaminase activity [Evidence IEA]
GO:0019700 - organic phosphonate catabolic process [Evidence IEA]
2-aminoethylphosphonate--pyruvate transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_011999177.1
GO:0050194 - phosphonoacetaldehyde hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017021575.1
COORDINATES: protein motif:HMM:NF033591.1
COORDINATES: similar to AA sequence:RefSeq:WP_019827968.1
COORDINATES: protein motif:HMM:TIGR01643.1
COORDINATES: protein motif:HMM:NF021255.2
COORDINATES: protein motif:HMM:NF020421.2
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0016070 - RNA metabolic process [Evidence IEA]
SymE family type I addiction module toxin
COORDINATES: protein motif:HMM:TIGR03696.1
RHS repeat-associated core domain-containing protein
COORDINATES: protein motif:HMM:NF024550.2
COORDINATES: protein motif:HMM:NF040127.1
COORDINATES: protein motif:HMM:NF024894.2
COORDINATES: protein motif:HMM:NF026976.2
zincin-like metallopeptidase toxin domain-containing protein
COORDINATES: protein motif:HMM:NF017315.2
COORDINATES: protein motif:HMM:NF025771.2
COORDINATES: protein motif:HMM:NF015692.2
COORDINATES: similar to AA sequence:RefSeq:WP_001096663.1
type VI secretion system tip protein TssI/VgrG
COORDINATES: similar to AA sequence:RefSeq:WP_020432677.1
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: protein motif:HMM:TIGR00619.1
exonuclease SbcCD subunit D C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024771.2
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: protein motif:HMM:NF013132.2
COORDINATES: similar to AA sequence:RefSeq:WP_004747790.1
COORDINATES: protein motif:HMM:NF003477.0
COORDINATES: protein motif:HMM:NF036520.2
COORDINATES: similar to AA sequence:RefSeq:WP_004748307.1
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013855931.1
dual specificity protein phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006712252.1
COORDINATES: similar to AA sequence:RefSeq:WP_017037076.1
COORDINATES: similar to AA sequence:RefSeq:WP_017019748.1
alanine/ornithine racemase family PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_001207963.1
COORDINATES: similar to AA sequence:RefSeq:WP_000414453.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_039289737.1
COORDINATES: protein motif:HMM:NF013945.2
COORDINATES: similar to AA sequence:RefSeq:WP_005464598.1
COORDINATES: similar to AA sequence:RefSeq:WP_014205268.1
COORDINATES: similar to AA sequence:RefSeq:WP_014205269.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
redox-sensitive transcriptional activator SoxR
COORDINATES: similar to AA sequence:RefSeq:WP_000450492.1
COORDINATES: similar to AA sequence:RefSeq:WP_019275340.1
COORDINATES: similar to AA sequence:RefSeq:WP_006961397.1
GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor [Evidence IEA]
cytochrome d ubiquinol oxidase subunit II
COORDINATES: protein motif:HMM:NF012334.2
COORDINATES: protein motif:HMM:NF016158.2
COORDINATES: similar to AA sequence:RefSeq:WP_006880737.1
GO:0003871 - 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005444946.1
COORDINATES: similar to AA sequence:RefSeq:WP_017049177.1
COORDINATES: similar to AA sequence:RefSeq:WP_017003335.1
COORDINATES: protein motif:HMM:NF016041.2
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017635741.1
COORDINATES: similar to AA sequence:RefSeq:WP_020196340.1
COORDINATES: protein motif:HMM:NF022517.2
COORDINATES: similar to AA sequence:RefSeq:WP_019820376.1
COORDINATES: protein motif:HMM:NF007866.0
Fe(3+)-hydroxamate ABC transporter permease FhuB
COORDINATES: similar to AA sequence:RefSeq:WP_011263607.1
iron-siderophore ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012552173.1
COORDINATES: protein motif:HMM:TIGR03950.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0008199 - ferric iron binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0033214 - siderophore-dependent iron import into cell [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017021400.1
GO:0019867 - outer membrane [Evidence IEA]
GO:0015343 - siderophore transmembrane transporter activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF018184.2
COORDINATES: similar to AA sequence:RefSeq:WP_012551653.1
COORDINATES: similar to AA sequence:RefSeq:WP_017067566.1
type II toxin-antitoxin system RelB/DinJ family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_000578471.1
carbon-nitrogen hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017046216.1
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_002033256.1
COORDINATES: protein motif:HMM:NF012307.2
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: similar to AA sequence:RefSeq:WP_012604823.1
GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005305199.1
COORDINATES: protein motif:HMM:TIGR01140.1
GO:0048472 - threonine-phosphate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017097270.1
GO:0016880 - acid-ammonia (or amide) ligase activity [Evidence IEA]
adenosylcobinamide-phosphate synthase CbiB
COORDINATES: protein motif:HMM:NF004790.0
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009847688.1
GO:0046026 - precorrin-4 C11-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009847687.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004409321.1
GO:0016852 - sirohydrochlorin cobaltochelatase activity [Evidence IEA]
GO:0019251 - anaerobic cobalamin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004409322.1
COORDINATES: similar to AA sequence:RefSeq:WP_017103285.1
GO:0030788 - precorrin-2 C20-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004409329.1
bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase
COORDINATES: protein motif:HMM:NF000849.0
cobalt-precorrin-5B (C(1))-methyltransferase
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_020433854.1
COORDINATES: protein motif:HMM:NF024109.2
nucleotidyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016958791.1
GO:0016021 - integral component of membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004401079.1
COORDINATES: protein motif:HMM:NF020976.2
COORDINATES: protein motif:HMM:NF019552.2
COORDINATES: protein motif:HMM:NF008653.0
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: protein motif:HMM:NF013775.2
COORDINATES: similar to AA sequence:RefSeq:WP_008216394.1
GO:0003920 - GMP reductase activity [Evidence IEA]
GO:0009117 - nucleotide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024895.2
COORDINATES: similar to AA sequence:RefSeq:WP_004727100.1
bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
COORDINATES: similar to AA sequence:RefSeq:WP_011081647.1
COORDINATES: similar to AA sequence:RefSeq:WP_004409046.1
COORDINATES: similar to AA sequence:RefSeq:WP_000106983.1
COORDINATES: similar to AA sequence:RefSeq:WP_000793853.1
GO:0045148 - tripeptide aminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004732016.1
COORDINATES: similar to AA sequence:RefSeq:WP_017046059.1
COORDINATES: similar to AA sequence:RefSeq:WP_014257657.1
COORDINATES: similar to AA sequence:RefSeq:WP_017033472.1
COORDINATES: similar to AA sequence:RefSeq:WP_017048974.1
COORDINATES: similar to AA sequence:RefSeq:WP_006879780.1
COORDINATES: protein motif:HMM:NF024973.2
COORDINATES: similar to AA sequence:RefSeq:WP_004727669.1
COORDINATES: similar to AA sequence:RefSeq:WP_006879307.1
COORDINATES: protein motif:HMM:NF037736.2
COORDINATES: similar to AA sequence:RefSeq:WP_004740701.1
COORDINATES: similar to AA sequence:RefSeq:WP_019276039.1
COORDINATES: similar to AA sequence:RefSeq:WP_017036769.1
COORDINATES: similar to AA sequence:RefSeq:WP_004727653.1
COORDINATES: similar to AA sequence:RefSeq:WP_000124505.1
COORDINATES: similar to AA sequence:RefSeq:WP_013868073.1
COORDINATES: similar to AA sequence:RefSeq:WP_017036762.1
COORDINATES: similar to AA sequence:RefSeq:WP_017047432.1
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: protein motif:HMM:NF018352.2
COORDINATES: protein motif:HMM:NF012927.2
COORDINATES: similar to AA sequence:RefSeq:WP_017097818.1
COORDINATES: similar to AA sequence:RefSeq:WP_017017860.1
COORDINATES: similar to AA sequence:RefSeq:WP_004731829.1
COORDINATES: similar to AA sequence:RefSeq:WP_001887705.1
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_000608715.1
isoamylase early set domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005452851.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: similar to AA sequence:RefSeq:WP_014234910.1
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000150764.1
phosphate ABC transporter permease subunit PstC
COORDINATES: similar to AA sequence:RefSeq:WP_010451068.1
COORDINATES: similar to AA sequence:RefSeq:WP_017033191.1
COORDINATES: similar to AA sequence:RefSeq:WP_011082395.1
COORDINATES: similar to AA sequence:RefSeq:WP_001038492.1
Lpp/OprI family alanine-zipper lipoprotein
COORDINATES: similar to AA sequence:RefSeq:WP_004744578.1
COORDINATES: similar to AA sequence:RefSeq:WP_010645145.1
COORDINATES: protein motif:HMM:NF024803.2
COORDINATES: similar to AA sequence:RefSeq:WP_002052899.1
DUF523 and DUF1722 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014257915.1
COORDINATES: similar to AA sequence:RefSeq:WP_000449160.1
COORDINATES: similar to AA sequence:RefSeq:WP_017054370.1
COORDINATES: protein motif:HMM:NF018894.2
COORDINATES: similar to AA sequence:RefSeq:WP_004743914.1
COORDINATES: similar to AA sequence:RefSeq:WP_014234994.1
GO:0015293 - symporter activity [Evidence IEA]
GO:0032329 - serine transport [Evidence IEA]; GO:0015826 - threonine transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004727335.1
COORDINATES: similar to AA sequence:RefSeq:WP_000783456.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004732522.1
COORDINATES: similar to AA sequence:RefSeq:WP_008989374.1
COORDINATES: similar to AA sequence:RefSeq:WP_017042891.1
COORDINATES: similar to AA sequence:RefSeq:WP_002043202.1
GO:0008509 - anion transmembrane transporter activity [Evidence IEA]
GO:0006820 - anion transport [Evidence IEA]
DASS family sodium-coupled anion symporter
COORDINATES: similar to AA sequence:RefSeq:WP_016795802.1
COORDINATES: protein motif:HMM:NF013329.2
COORDINATES: similar to AA sequence:RefSeq:WP_004736854.1
COORDINATES: similar to AA sequence:RefSeq:WP_017067098.1
COORDINATES: similar to AA sequence:RefSeq:WP_006881350.1
COORDINATES: similar to AA sequence:RefSeq:WP_004743945.1
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006961882.1
GO:0008495 - protoheme IX farnesyltransferase activity [Evidence IEA]
GO:0048034 - heme O biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005532283.1
GO:0009486 - cytochrome bo3 ubiquinol oxidase activity [Evidence IEA]
GO:0015990 - electron transport coupled proton transport [Evidence IEA]
cytochrome o ubiquinol oxidase subunit IV
COORDINATES: similar to AA sequence:RefSeq:WP_004727371.1
cytochrome o ubiquinol oxidase subunit III
COORDINATES: similar to AA sequence:RefSeq:WP_020197250.1
cytochrome o ubiquinol oxidase subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_012551566.1
COORDINATES: similar to AA sequence:RefSeq:WP_005464874.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009842182.1
COORDINATES: similar to AA sequence:RefSeq:WP_000026551.1
COORDINATES: similar to AA sequence:RefSeq:WP_010317255.1