Thiothrix unzii strain A1 plasmid pTunz1, complete sequence.
type: Entry
definition: Thiothrix unzii strain A1 plasmid pTunz1, complete sequence.
sequence version: NZ_CP072796.1
sequence date: 2023-05-07
sequence: sequence
division: CON
label: NZ_CP072796.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN18614033
keyword: RefSeq
source: Thiothrix unzii
organism: Thiothrix unzii
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP072796.1.\nBacteria and source DNA available from Dr. Margarita Grabovich\n(margarita_grabov@mail.ru).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 23-MAR-2021\nAssembly Method :: Flye v. 2.8\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 448.0x\nSequencing Technology :: Illumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/07/2023 04:54:28\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,728\nCDSs (total) :: 3,673\nGenes (coding) :: 3,656\nCDSs (with protein) :: 3,656\nGenes (RNA) :: 55\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 45\nncRNAs :: 4\nPseudo Genes (total) :: 17\nCDSs (without protein) :: 17\nPseudo Genes (ambiguous residues) :: 0 of 17\nPseudo Genes (frameshifted) :: 7 of 17\nPseudo Genes (incomplete) :: 9 of 17\nPseudo Genes (internal stop) :: 1 of 17\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 34476
topology: circular
so has quality: SO_0000988
location: 1..34476
location: region:1-34476:1
RO_0002162: 111769

NZ_CP072796
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN18614033
type: BioSample
SIO_000068: biosample

1
title: Genomics, taxonomy and metabolism of representatives of sulfur bacteria of the genus Thiothrix: Thiothrix fructosivorans QT, Thiothrix unzii A1T and three new species, Thiothrix subterranea sp. nov., Thiothrix litoralis sp. nov. and 'Candidatus Thiothrix anitrata' sp. nov
author: Ravin, N.V.
author: Smolyakov, D.
author: Rudenko, T.S.
author: Mardanov, A.V.
author: Beletsky, A.V.
author: Markov, N.D.
author: Fomenkov, A.I.
author: Roberts, R.J.
author: Karnachuk, O.V.
author: Novikov, A.
author: Grabovich, M.Y.
journal: Unpublished

2
title: Direct Submission
author: Ravin, N.V.
author: Beletsky, A.V.
author: Mardanov, A.V.
journal: Submitted (05-APR-2021) Department of molecular biology of microorganisms, Institute of Bioengineering, Research Center of Biotechnology of RAS, Prosp. 60-let Oktyabrya, bld 7-1, Moscow 117312, Russia

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34476:1
position: 34476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-34476:1:source
so part of: sequence
organism: Thiothrix unzii
mol type: genomic DNA
strain: A1
isolation source: Isolated from activated-sludge plants
type material: type strain of Thiothrix unzii
plasmid: pTunz1

111769
type: Taxonomy
SIO_000068: taxonomy

J9260_RS18110
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18110
old locus tag: J9260_18105
so part of: sequence
location: join(33922..34476,1..192)
location: region:1-34476:1
so has part: feature:33922-34476:1:exon
so has part: feature:1-192:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:33922-34476:1:exon

position:33922:1
position: 33922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-192:1:exon

position:192:1
position: 192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

J9260_RS18110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18110
old locus tag: J9260_18105
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNLIIAHKTDLMRRVLHLVSHGYAYWIAGEIAPAKVDGFALKCNDRYHTHRTEMQRYRAKKKGEANTQLVMWQDQTAKNAPVHWWLLATKGSGLVHELEKLTMIRDSRPTLTGYELVMTNRKRRDKDKPDKKLKPGWTWRMTAETFEGWKERIKTAVRHNSDNQIRQALHSLGGVPGFRECRVQARLLVRMLKNDWKRTQKGEFPYPEPFITFCGRHQKAKTITTQEASQKARRKLRQATRLSPAESG
SIO_010081: J9260_RS18110
subclass of: SO_0000673
so part of: J9260_RS18110
location: join(33922..34476,1..192)
location: region:1-34476:1
so has part: feature:33922-34476:1:exon
so has part: feature:1-192:1:exon

WP_210220897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33922-34476:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-192:1:exon

J9260_RS18115
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18115
old locus tag: J9260_18110
so part of: sequence
location: 544..1218
location: region:544-1218:1
so has part: feature:544-1218:1:exon
subclass of: SO_0000010

position:544:1
position: 544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1218:1
position: 1218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544-1218:1:exon

J9260_RS18115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18115
old locus tag: J9260_18110
inference: COORDINATES: protein motif:HMM:NF014045.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NYN domain-containing protein
translation: MKTTLYIDGFNLYYGVLKGSPYKWLDVVKLFTHICQEQNPDAEIVAVKFFTAPVKGKIATRGEQAVMSQNAYHKALRTLYPDLFQVIEGYFILEAGGMPRYQNPLVKTDRVNVWRLEEKKTDVNIALHLYRDAYKGMGQLVLVSNDSDIVPALEAIQEDFPQSITATIMPRLKPAGGEARPPNAELSNLSHWTRHYILEEELKACQLPNMIPTKKRAVYKPDYW
SIO_010081: J9260_RS18115
subclass of: SO_0000673
so part of: J9260_RS18115
location: 544..1218
location: region:544-1218:1
so has part: feature:544-1218:1:exon

WP_210220898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:544-1218:1:exon

J9260_RS18120
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18120
old locus tag: J9260_18115
so part of: sequence
location: 1320..1733
location: region:1320-1733:1
so has part: feature:1320-1733:1:exon
subclass of: SO_0000010

position:1320:1
position: 1320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1733:1
position: 1733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1320-1733:1:exon

J9260_RS18120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18120
old locus tag: J9260_18115
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQPIITLAVVGIAAVSLMGCQLKEDSMDYFQNESEVMIIKGENHDLNIENRLDRVSLYGSVDITHDQAGLAQALRLKGVVDGMVSTLAKEQTKGVLPAKIVPILYYSIPVLPTPPATDNVPLSGFGIQQAVPTRYG
SIO_010081: J9260_RS18120
subclass of: SO_0000673
so part of: J9260_RS18120
location: 1320..1733
location: region:1320-1733:1
so has part: feature:1320-1733:1:exon

WP_210220899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1320-1733:1:exon

J9260_RS18125
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18125
old locus tag: J9260_18120
so part of: sequence
location: complement(1627..2043)
location: region:1627-2043:-1
so has part: feature:1627-2043:-1:exon
subclass of: SO_0000010

position:1627:-1
position: 1627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2043:-1
position: 2043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1627-2043:-1:exon

J9260_RS18125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18125
old locus tag: J9260_18120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013149410.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MQQKLTIGMLSKQSAVKVETIRYYERSGLLPIPTRSASGYRYYDGEDVKRLRFIRRGRSLGFGLEEIRSLLQLADQPQQPCHEADQLVQAHLAEVDAKIRDLQAIRNVLEQLAGCQSQTAAHCRLLEALEERVCCSTR
SIO_010081: J9260_RS18125
subclass of: SO_0000673
so part of: J9260_RS18125
location: complement(1627..2043)
location: region:1627-2043:-1
so has part: feature:1627-2043:-1:exon

WP_210220900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1627-2043:-1:exon

J9260_RS18130
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18130
old locus tag: J9260_18125
so part of: sequence
location: 2107..2739
location: region:2107-2739:1
so has part: feature:2107-2739:1:exon
subclass of: SO_0000010

position:2107:1
position: 2107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2739:1
position: 2739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2107-2739:1:exon

J9260_RS18130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18130
old locus tag: J9260_18125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007638973.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation transporter
translation: MSAQCGCNHSCSTEAKTPHGRYRLILWLALLINAAMFGVEMLFGVWAQSASLLADSLDFFGDAANYGISLWVLGMGLAIRAKASLLKAATMAVFGVWVLGRTGWGLWAGNLPDAMTMGSVALLALAANVAVAAMLYVYREGDSNMRSVWICSRNDAIGNVAVVLAAVGVFGTASGLPDLIVAGVMATLALSGAWQMWGYAQQDLHRAAAV
SIO_010081: J9260_RS18130
subclass of: SO_0000673
so part of: J9260_RS18130
location: 2107..2739
location: region:2107-2739:1
so has part: feature:2107-2739:1:exon

WP_210220901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2107-2739:1:exon

J9260_RS18135
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18135
old locus tag: J9260_18130
so part of: sequence
location: 2723..3169
location: region:2723-3169:1
so has part: feature:2723-3169:1:exon
subclass of: SO_0000010

position:2723:1
position: 2723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3169:1
position: 3169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2723-3169:1:exon

J9260_RS18135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18135
old locus tag: J9260_18130
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPPLSDVFFRWSSECLRCITVLVYAARMKKPIIQRLLSFLLACVLLGQVQAAMADCHIDVVHTGHDIHTAHLVNGGKHLVTWDGHGHSGQSSDVENHQHCCHTTTASIALPVVSVALPSSKAINITSTFTLDHYRDPLADLLIRPPIA
SIO_010081: J9260_RS18135
subclass of: SO_0000673
so part of: J9260_RS18135
location: 2723..3169
location: region:2723-3169:1
so has part: feature:2723-3169:1:exon

WP_210220902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2723-3169:1:exon

J9260_RS18140
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18140
old locus tag: J9260_18135
so part of: sequence
location: 3222..3623
location: region:3222-3623:1
so has part: feature:3222-3623:1:exon
subclass of: SO_0000010

position:3222:1
position: 3222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3623:1
position: 3623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3222-3623:1:exon

J9260_RS18140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18140
old locus tag: J9260_18135
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNLLLAVVLPLLAVGCAVNPEKTALQAQGISTDGASTVAFQNVHLENTANGTSQIRGSLERIGRDPVRFGHLDYTVTDTSGKVLESGKANYSGAIKQRHPRTASRFTIPLKQAWQPSLHHATLVWDDKTHQQ
SIO_010081: J9260_RS18140
subclass of: SO_0000673
so part of: J9260_RS18140
location: 3222..3623
location: region:3222-3623:1
so has part: feature:3222-3623:1:exon

WP_210220903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3222-3623:1:exon

J9260_RS18145
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18145
old locus tag: J9260_18140
so part of: sequence
location: 3636..4187
location: region:3636-4187:1
so has part: feature:3636-4187:1:exon
subclass of: SO_0000010

position:3636:1
position: 3636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4187:1
position: 4187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3636-4187:1:exon

J9260_RS18145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18145
old locus tag: J9260_18140
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKLLAGCVCSLMFACAAVAGDGHDHGEEKAAAAPDSPAAPRLVMESTQFELVGTLEGDGLHLFLDDHASNAPVTDASVELDIAGQRIKAEQEADGSYHAAMSQPLPEGEYAVMATILAGETSDLLTGDLDVHAAEAMHVEPATATSASGWGFLPWVLGLVVIALALVVFTLRRDRHQRRVQA
SIO_010081: J9260_RS18145
subclass of: SO_0000673
so part of: J9260_RS18145
location: 3636..4187
location: region:3636-4187:1
so has part: feature:3636-4187:1:exon

WP_210220904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3636-4187:1:exon

J9260_RS18150
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18150
old locus tag: J9260_18145
so part of: sequence
location: 4184..5290
location: region:4184-5290:1
so has part: feature:4184-5290:1:exon
subclass of: SO_0000010

position:4184:1
position: 4184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5290:1
position: 5290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4184-5290:1:exon

J9260_RS18150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18150
old locus tag: J9260_18145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012700477.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter periplasmic adaptor subunit
translation: MKPTAFLLIGALLLPALAIAGDGHDHGEAAPTAANPNAPQRLPDGSVFLPKKTQRFIQVRTQPATLETLPRSLILNGQVVAGMDASSKVQALQAGRLDIANGSLPAIGDKVEKGQVLATLTLAKDAQEGTNQAAEAADLQEQLKLAELDYQRLQGLGDLIPRRDVDTAAATVRSLQARLAVFRKGAKGVTETVRSPISGIVTASYAANGQAVQAGDLLLDIIDPSKLQVEAVTYDPALPANIAAANVTIGKQTLALRYQGNSQQLRQQALPLRFSVEGETLAQLAAGSPVQVTVQTRETLQGVAVPAEALARNPSNQTVVWVKTTPEQYAPRVVQYQPLDGERVMITAGLPDGERVVVQATNLINQIR
SIO_010081: J9260_RS18150
subclass of: SO_0000673
so part of: J9260_RS18150
location: 4184..5290
location: region:4184-5290:1
so has part: feature:4184-5290:1:exon

WP_210220905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4184-5290:1:exon

J9260_RS18155
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18155
old locus tag: J9260_18150
so part of: sequence
location: 5300..8404
location: region:5300-8404:1
so has part: feature:5300-8404:1:exon
subclass of: SO_0000010

position:5300:1
position: 5300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8404:1
position: 8404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5300-8404:1:exon

J9260_RS18155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18155
old locus tag: J9260_18150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014237949.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter permease subunit
translation: MFNWLLNASLGNRLLVLVASAMLMIYGALQLPQTAVDVFPDLNRPTVTLMTEAGGMAPEEVERLISFPLETTLNGLPGIESVRSVSSAGLSFVYAVFDWDTDIYRARQMVSERLGAMESGLPAGIVPQMGPVSSIMGEIMMVAVPIDPAKIDPMAVREYADWVLRPRLLSIAGVAQVIPIGGEVRQFQVQPDMRRMTDLGISLTQLADALEGFANNTSGGFMELSGKEYLIRHIGRTSSLEDLQNLAITATAGQPILLKQVASVTFAPKVKRGDAGFNGQPAVILGIQKQPDADTIQLTQAIETALESMKTSLPQGMAEPRVTFRQASFIEASIGNLEHKLVLASLLVMVILFLFLGNFRTTLISLMAIPLSILCTVLVFRYLDLSINTMTLGGLAIAIGELVDDAVVGVENVIRRLRNNRLHKTQLAPLKIVLHATLEVRSAIVYATIIVVLVFLPLFALPGMEGKLFVPLGIAYITSILVSMLVSVTLTPVMAYYLLPNMKQLDHPEPWLVRWLKRGYAKALETVLDYPRTLLGIGAVAVLLAGSLVPLFPTTFLPPFNEGTLLVSVRLTPGVTLAESVRIAAKAETLLQDVPEIAHVGRRSGRAELDEHAEGVHNSELDIALKPSERSMDVVYGDIRARLAPLPVNVSIGQPISHRIDHMLSGVRAQIAIKLFGDDLDTLRAQGERLQQALATVDGVADLNMEKQVLAPQIKVYVDYAVAGQYGLSGAALLRELQMLVDGATINEIVDGNRRFKLVLRLPEAARSTTQLQDLLISTPLGQVPLSKLAKIEESDGPNQVSRDNGQRRIVLSANVQGRALSEVVVDMRAKVADFTLPEGYFITIGGQFEAQEQAAQRITLLAAVAALLVFLTLYSRYQSTTLALLIMANIPLALVGSVIGLWLSGQPLSVAALIGFITLAGISTRNGILKTSHYLNLMRLEGESFTRAMIIRGSLERLSPVLMTALVAAFALMPLLFEAEQPGTEILHPVAVVIFSGLISSTLLDTFLTPAMFWLFGRKPAEKLLDMASDEAL
SIO_010081: J9260_RS18155
subclass of: SO_0000673
so part of: J9260_RS18155
location: 5300..8404
location: region:5300-8404:1
so has part: feature:5300-8404:1:exon

WP_210220906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5300-8404:1:exon

J9260_RS18160
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18160
old locus tag: J9260_18155
so part of: sequence
location: 8437..8985
location: region:8437-8985:1
so has part: feature:8437-8985:1:exon
subclass of: SO_0000010

position:8437:1
position: 8437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8985:1
position: 8985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8437-8985:1:exon

J9260_RS18160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18160
old locus tag: J9260_18155
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLLPTLLIACGLLASPMVLAEEPPKHGETGHDHAKDHGQTTTPETKPEDTHKGESAEDHAKHEQEGHDHAHDDKPHHGGIVAVVDEIHHELVTAEDGKVSLYAEGLPQGDALKAVKVRLTVLKGKDKQEADLTLVEGDEPRFDAPAEMKLGAGDKVVAMIQPAEGKPRMAKFEMPTETPAK
SIO_010081: J9260_RS18160
subclass of: SO_0000673
so part of: J9260_RS18160
location: 8437..8985
location: region:8437-8985:1
so has part: feature:8437-8985:1:exon

WP_210220907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8437-8985:1:exon

J9260_RS18165
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18165
old locus tag: J9260_18160
so part of: sequence
location: 8993..9352
location: region:8993-9352:1
so has part: feature:8993-9352:1:exon
subclass of: SO_0000010

position:8993:1
position: 8993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9352:1
position: 9352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8993-9352:1:exon

J9260_RS18165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18165
old locus tag: J9260_18160
inference: COORDINATES: protein motif:HMM:NF024212.2
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MASVGGSNLAGIAQYNERLVLQLIRRAQSLTKADIARITHLSAQTASVIINRLLAEKLLCKQKPRHEVGKVGQPAIPISLNPSGAYSLGVKIGRRGLDAVLINFTGGILRRWVPLHKGT
SIO_010081: J9260_RS18165
subclass of: SO_0000673
so part of: J9260_RS18165
location: 8993..9352
location: region:8993-9352:1
so has part: feature:8993-9352:1:exon

WP_210220908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8993-9352:1:exon

J9260_RS18170
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18170
old locus tag: J9260_18165
so part of: sequence
location: complement(9376..9972)
location: region:9376-9972:-1
so has part: feature:9376-9972:-1:exon
subclass of: SO_0000010

position:9376:-1
position: 9376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9972:-1
position: 9972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9376-9972:-1:exon

J9260_RS18170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18170
old locus tag: J9260_18165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002706509.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLIGYARVSTIDQNTALQMDALKAAGCEKVFTEKASGSHRDRPQLLAALDYLRKGDTLVVWKLSRLARSLTQVIKTAANIHERGIALKVLTQNIDTSTSEGRLFFHMTAAFDEFQRELIVENTRAGLAAANRRGRRGGRPKAMNEQAIKQAEALLKDTENYPFIGDVIDQLGIGRTAFYRYFPTDRIKELRNEHSAKA
SIO_010081: J9260_RS18170
subclass of: SO_0000673
so part of: J9260_RS18170
location: complement(9376..9972)
location: region:9376-9972:-1
so has part: feature:9376-9972:-1:exon

WP_210220909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9376-9972:-1:exon

J9260_RS18175
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18175
old locus tag: J9260_18170
so part of: sequence
location: complement(10204..10524)
location: region:10204-10524:-1
so has part: feature:10204-10524:-1:exon
subclass of: SO_0000010

position:10204:-1
position: 10204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10524:-1
position: 10524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10204-10524:-1:exon

J9260_RS18175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18175
old locus tag: J9260_18170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005176570.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADLSKLKKRNRFGDPPQVEAAGDNLSAPEVAPIALAVIPNEATVKLSRPARKTGRTEAFGTRVSGDFLKEFKRIAFEDDLKFVELLELSLEAYKIQRKITKSLKA
SIO_010081: J9260_RS18175
subclass of: SO_0000673
so part of: J9260_RS18175
location: complement(10204..10524)
location: region:10204-10524:-1
so has part: feature:10204-10524:-1:exon

WP_210220910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10204-10524:-1:exon

J9260_RS18180
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18180
old locus tag: J9260_18175
so part of: sequence
location: complement(10527..11147)
location: region:10527-11147:-1
so has part: feature:10527-11147:-1:exon
subclass of: SO_0000010

position:10527:-1
position: 10527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11147:-1
position: 11147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10527-11147:-1:exon

J9260_RS18180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18180
old locus tag: J9260_18175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017901447.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MAIIAFLSQKGGVGKSTLARAFACEAKKSGLSIKLADLDTQQGTVSEWHRHRLNNGNDPVGSVEVFGKVRDALELAESFDILILDGAPRASTATLEIAKVADLLVLPTGASRDDLIPTVLLAHELVKKGVPPERIGIALVRVSTESEIQDANHYITQAGHYCFKGHLPEKPAYRQAQNDGLAVTETRYKSLNERADELVQSITDRL
SIO_010081: J9260_RS18180
subclass of: SO_0000673
so part of: J9260_RS18180
location: complement(10527..11147)
location: region:10527-11147:-1
so has part: feature:10527-11147:-1:exon

WP_210220911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10527-11147:-1:exon

J9260_RS18185
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18185
old locus tag: J9260_18180
so part of: sequence
location: 11320..11481
location: region:11320-11481:1
so has part: feature:11320-11481:1:exon
subclass of: SO_0000010

position:11320:1
position: 11320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11481:1
position: 11481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11320-11481:1:exon

J9260_RS18185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18185
old locus tag: J9260_18180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005013709.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFDLSFLDVKNWYRLHVLSAYPAPERRGGGKIGFFKIAYNLRMGKPLPSNPHK
SIO_010081: J9260_RS18185
subclass of: SO_0000673
so part of: J9260_RS18185
location: 11320..11481
location: region:11320-11481:1
so has part: feature:11320-11481:1:exon

WP_210220912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11320-11481:1:exon

J9260_RS18190
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18190
old locus tag: J9260_18185
so part of: sequence
location: 12454..12900
location: region:12454-12900:1
so has part: feature:12454-12900:1:exon
subclass of: SO_0000010

position:12454:1
position: 12454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12900:1
position: 12900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12454-12900:1:exon

J9260_RS18190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18190
old locus tag: J9260_18185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002707656.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF29 domain-containing protein
translation: MGAVAYDQDLYSWSLEQARLLRERKFDQIDLEHIIEEIEDMSKSEKRALESFLETLLMHLLKWQYQPFYIGRRSWELTIIEQRKRLKKHMRENPGLKSKLEEAILDAYDLAKSGAEKETGIPSASFPETCPWEYEQFINPDFWPEPTE
SIO_010081: J9260_RS18190
subclass of: SO_0000673
so part of: J9260_RS18190
location: 12454..12900
location: region:12454-12900:1
so has part: feature:12454-12900:1:exon

WP_210220913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12454-12900:1:exon

J9260_RS18195
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18195
old locus tag: J9260_18190
so part of: sequence
location: complement(12937..14442)
location: region:12937-14442:-1
so has part: feature:12937-14442:-1:exon
subclass of: SO_0000010

position:12937:-1
position: 12937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14442:-1
position: 14442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12937-14442:-1:exon

J9260_RS18195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18195
old locus tag: J9260_18190
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSMFTNDTAAIFDAKARAVRAYHLMQWARWATFCLYIVAVFMLYVSDVWGIASFLENNSNEYIALAIFSVTSFILAYFLASSKEAVYEDIALNRSEGFHMTAGQRFAMVLFASAGILFELFSATSNQQHISNNAAEQVGLLKPAEVGSVAINTSPALTDALMKAQANLNKCQEMLKQGRVKDCHVSEGKVTGALKAIDMANQTAATVSGELVDKTNAHNEKLLERFDKPMFKVVGKVVGGDTNDGMIVAVAVMITIFELQHILAVFAYGNALRRMNADKLAKPPVATVKPEPTLQTGSASLLHKTGETIATEMAKAQQAREQVYHSAADKLDNLQVRESSGFKQSPEQLAKAMELAGMTYRTELRQGGQQFRDAPLDRPTPAILPTVTDTVPARSGTVADTVLARSQNGSTERLTDTAQQTETDLYPDWVGQVSNQTISPGARDAKRFISQRTKSGADKTGLTVQEMGRIWLNWQARAVGEGVLTPNPDYSNGKPKYILA
SIO_010081: J9260_RS18195
subclass of: SO_0000673
so part of: J9260_RS18195
location: complement(12937..14442)
location: region:12937-14442:-1
so has part: feature:12937-14442:-1:exon

WP_210220914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12937-14442:-1:exon

J9260_RS18200
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18200
old locus tag: J9260_18195
so part of: sequence
location: complement(14455..14799)
location: region:14455-14799:-1
so has part: feature:14455-14799:-1:exon
subclass of: SO_0000010

position:14455:-1
position: 14455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14799:-1
position: 14799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14455-14799:-1:exon

J9260_RS18200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18200
old locus tag: J9260_18195
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHTHDSNLRPSVREHFTDNHATTPRDTTVSTPNHPAPVDWALFFHVVVRLLAVTALLYIAYCIFTYFQLFGVSAIALSGQFALALFFTYAVLTGYDDAETLLICLGMFLLVGMF
SIO_010081: J9260_RS18200
subclass of: SO_0000673
so part of: J9260_RS18200
location: complement(14455..14799)
location: region:14455-14799:-1
so has part: feature:14455-14799:-1:exon

WP_210220915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14455-14799:-1:exon

J9260_RS18205
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18205
old locus tag: J9260_18200
so part of: sequence
location: complement(14874..15803)
location: region:14874-15803:-1
so has part: feature:14874-15803:-1:exon
subclass of: SO_0000010

position:14874:-1
position: 14874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15803:-1
position: 15803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14874-15803:-1:exon

J9260_RS18205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18205
old locus tag: J9260_18200
inference: COORDINATES: protein motif:HMM:NF013235.2
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MVEEQRIDDSYISKNARPGETWEQARKRLQSTPPPTGEIIERSRLSPPPDNLQTIYGHDGEIHLAKALVKAAHGLTIHQTRLIRYAVSKIHPTAPQPSQLVVRIVAVDYAEKMGVKGSKNFYRDLQEAADALFNRYITITRETPKGRTTEKIHWVSSAKYHTGEGWVELRFSPEVSPSLSMLNNGDKIIYKLQSTVDLKSTYSWRLYELLMQWKDTKRLLISVEDYRNSLDVPESYIYGDIKAHCIDKPIKELKAKCHMDIEFKAIKDKENKKRVGSLEFSWKYAEQIDMPLEGGETPKKKRGRKPKEA
SIO_010081: J9260_RS18205
subclass of: SO_0000673
so part of: J9260_RS18205
location: complement(14874..15803)
location: region:14874-15803:-1
so has part: feature:14874-15803:-1:exon

WP_210220916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14874-15803:-1:exon

J9260_RS18210
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18210
old locus tag: J9260_18205
so part of: sequence
location: 18156..18317
location: region:18156-18317:1
so has part: feature:18156-18317:1:exon
subclass of: SO_0000010

position:18156:1
position: 18156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18317:1
position: 18317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18156-18317:1:exon

J9260_RS18210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18210
old locus tag: J9260_18205
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARCVFAIPPQVTAQQILGNLFAFGSTILPLQGVGAVGMVVAWMNVTNNTKVS
SIO_010081: J9260_RS18210
subclass of: SO_0000673
so part of: J9260_RS18210
location: 18156..18317
location: region:18156-18317:1
so has part: feature:18156-18317:1:exon

WP_210220883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18156-18317:1:exon

J9260_RS18215
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18215
old locus tag: J9260_18210
so part of: sequence
location: complement(18390..19043)
location: region:18390-19043:-1
so has part: feature:18390-19043:-1:exon
subclass of: SO_0000010

position:18390:-1
position: 18390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19043:-1
position: 19043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18390-19043:-1:exon

J9260_RS18215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18215
old locus tag: J9260_18210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009759544.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MTAKTASPAPKTVAYLRVSTQGQDTGKNKADILYFANHHDLGKVTFVEEVASGKKSWRERQIAQVLEALQDGDALIVAELSRLGRSMLECMEILALSTRKGIRVYSVKGSWRLDHSIQSKIIALAFSMAAEIERDLISQRTTEALRAKKAQGFILGRPKGPGKSKLDAFRPEIEGLLVNGATQRFIAQRYHTTEANLYNWLKKHGLNRIKCVPHEEK
SIO_010081: J9260_RS18215
subclass of: SO_0000673
so part of: J9260_RS18215
location: complement(18390..19043)
location: region:18390-19043:-1
so has part: feature:18390-19043:-1:exon

WP_210220884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18390-19043:-1:exon

J9260_RS18220
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18220
old locus tag: J9260_18215
so part of: sequence
location: 19199..22264
location: region:19199-22264:1
so has part: feature:19199-22264:1:exon
subclass of: SO_0000010

position:19199:1
position: 19199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22264:1
position: 22264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19199-22264:1:exon

J9260_RS18220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18220
old locus tag: J9260_18215
inference: COORDINATES: protein motif:HMM:NF033527.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MARMRIFNRLEEDAFESPPVFNSAERKRFFSLPLALEEPLLGLRTPTNRVCFLVVAGYFKARHKFFSRQFRQTDIEYVASQMGVNPAVVSIGAYGKETYARHQRLILAHFGYRPFDGTAKTAIANEMAALVRVQSRPKLVLLEGIQMLTREKVALPSYNVLADLTVAAIDHHHARLLKTVNDHLSKIQRDQLDALLEKEPDNGDGEGWRYHLTLLKKANQSTQPSKIKANLADMDTLQALYLDLKPVVERLGLGYGHTRHYAYTVIKARISQVMQRSDNDCYLHLIAFIAYQTFKLNDTLTDTLLGVVQAATNAALKDQKETYFKAREQHRQSLATLVEQLRQNVHGALDAIRQIVADGQLGDNQKLALISAALDTEDATPAQVDRHIEGFKQEVAELQHSQDYLTRLEAHSLKLQHRAADIVRRIQFTPDCNKPALWEALRHYQKSDGNPDKGAPTGFLSTEQCAALTGPDGKFRISLYKALLFVGVAQAIKSGALNLIHSEKYRSLGEYLIPKTDWVANRAEYLHRAQLDRFADCSATLAALGQELDGRYQQTNQNFKSGNNPYLTVRANGSIHVSTPKLGEVESRSLGDFFPERKYIPMLEMLATVSHASGFLDEFVHWQVKHQRTRPAKKTLFAGIIGYGCDIGHHKLAQISQQIDGGELDNTVNWYFSLQNVQAANDRILQLTDRLGLPDIYRSSPGVLHTSSDGQKFGVAVDSLNANYSFKYLGKDKGVSVATFIDMRHLMWHSTVISASEREAAYVIDGLMHNDVVKSDIHSTDTHGYSEVVFAVTYLLGPEFAPRIKGLGKQHLYAFKSRKHYEDQGHVLLPDHTIRTHLIEAQWDEILRFVATIRLKVTTASQLFKRLNSYSNQHPLYQALKEFGKIIKSRFILKYYDDCQYRQAIEKQLNKGESSNKFSKAVSFGNNPAFTQGEKEDQEVAEGCRRLIKNAAVCWNYLYLSRELATGKDETRKTELLDAIRHGSALTWKHFNLHGEFDFSDERMVDSVGLAIPKKLGGWQG
SIO_010081: J9260_RS18220
subclass of: SO_0000673
so part of: J9260_RS18220
location: 19199..22264
location: region:19199-22264:1
so has part: feature:19199-22264:1:exon

WP_210220885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19199-22264:1:exon

J9260_RS18225
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18225
old locus tag: J9260_18220
so part of: sequence
location: complement(22528..23007)
location: region:22528-23007:-1
so has part: feature:22528-23007:-1:exon
subclass of: SO_0000010

position:22528:-1
position: 22528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23007:-1
position: 23007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22528-23007:-1:exon

J9260_RS18225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18225
old locus tag: J9260_18220
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRILFSENQQMEFTSTGNNHHFDFWMVNGQTHWARLPPKTIQGFSCELPICLQTGTASWGKTHIERKHKHWLETQSKNVCELLYEKLGQPGHFFSSEESSKVKLVMRLAPDALLILRHVENKTLGDFLTVTTMYQVPRHIDGAGIGRYLSNYRTTNQIT
SIO_010081: J9260_RS18225
subclass of: SO_0000673
so part of: J9260_RS18225
location: complement(22528..23007)
location: region:22528-23007:-1
so has part: feature:22528-23007:-1:exon

WP_210220886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22528-23007:-1:exon

J9260_RS18230
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18230
old locus tag: J9260_18225
so part of: sequence
location: complement(23592..24059)
location: region:23592-24059:-1
so has part: feature:23592-24059:-1:exon
subclass of: SO_0000010

position:23592:-1
position: 23592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24059:-1
position: 24059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23592-24059:-1:exon

J9260_RS18230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18230
old locus tag: J9260_18225
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDISTKTTSNAARFQPDHWQMNDRKTDVSQVLFPSEHPDVDEHVGKLLDGVLSTITGSSVAYADDAVPPQMPPETPPQQATSRYTGNTCDSDGAVKSIAENGLAAGAGGLVLGTVSGLAAGGPVGAVVGAAAAGAAGGMLTGTVGGGTLHQLGCN
SIO_010081: J9260_RS18230
subclass of: SO_0000673
so part of: J9260_RS18230
location: complement(23592..24059)
location: region:23592-24059:-1
so has part: feature:23592-24059:-1:exon

WP_210220887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23592-24059:-1:exon

J9260_RS18235
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18235
old locus tag: J9260_18230
so part of: sequence
location: 24309..24554
location: region:24309-24554:1
so has part: feature:24309-24554:1:exon
subclass of: SO_0000010

position:24309:1
position: 24309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24554:1
position: 24554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24309-24554:1:exon

J9260_RS18235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18235
old locus tag: J9260_18230
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTMTHLDIAWYFATIRWLPLFLFVSIGIADLVAQAGRSEPVHWVFLAICITFGLLLFRVGCILMDCQSATQPKSIPVEGKK
SIO_010081: J9260_RS18235
subclass of: SO_0000673
so part of: J9260_RS18235
location: 24309..24554
location: region:24309-24554:1
so has part: feature:24309-24554:1:exon

WP_210220888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24309-24554:1:exon

J9260_RS18240
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18240
old locus tag: J9260_18235
so part of: sequence
location: 25087..25272
location: region:25087-25272:1
so has part: feature:25087-25272:1:exon
subclass of: SO_0000010

position:25087:1
position: 25087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25272:1
position: 25272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25087-25272:1:exon

J9260_RS18240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18240
old locus tag: J9260_18235
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQITEKEIEEALLLLSEAHQQLLDAGHYGVDLLVFRAIQLLRDCPPHRFKSINPPSLLLQS
SIO_010081: J9260_RS18240
subclass of: SO_0000673
so part of: J9260_RS18240
location: 25087..25272
location: region:25087-25272:1
so has part: feature:25087-25272:1:exon

WP_210220889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25087-25272:1:exon

J9260_RS18245
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18245
old locus tag: J9260_18240
so part of: sequence
location: 25962..26405
location: region:25962-26405:1
so has part: feature:25962-26405:1:exon
subclass of: SO_0000010

position:25962:1
position: 25962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26405:1
position: 26405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25962-26405:1:exon

J9260_RS18245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18245
old locus tag: J9260_18240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007425152.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF29 domain-containing protein
translation: MGAVAYETDFYGWTLEQADLLQSGKFDKVDLGNLIEELHIMSARERRELINRLRVLMMHLLKWRYQPSYRGRSWELTINNQRDELAIHLEDNPSLMPRIPEATIKAYPMAKRDAEKETGIPGKQFPVDCPWTFEQLMDAEFWPEPVE
SIO_010081: J9260_RS18245
subclass of: SO_0000673
so part of: J9260_RS18245
location: 25962..26405
location: region:25962-26405:1
so has part: feature:25962-26405:1:exon

WP_210220890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25962-26405:1:exon

J9260_RS18250
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18250
old locus tag: J9260_18245
so part of: sequence
location: 26447..26902
location: region:26447-26902:1
so has part: feature:26447-26902:1:exon
subclass of: SO_0000010

position:26447:1
position: 26447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26902:1
position: 26902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26447-26902:1:exon

J9260_RS18250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18250
old locus tag: J9260_18245
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLFVVISLAALLAGCATPNDAVSNKSSSQHGNAAIRYNPESVQMVSIDGKAYPRPTLAQAVVTGQPDTYVTPGKHKIVATLDFRIQGFSRTVSPIPKEACFIAESGKTYNVSALIVPRKLFDTTTPIDWNPVISEFVTALDAKNVTQTCN
SIO_010081: J9260_RS18250
subclass of: SO_0000673
so part of: J9260_RS18250
location: 26447..26902
location: region:26447-26902:1
so has part: feature:26447-26902:1:exon

WP_210220891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26447-26902:1:exon

J9260_RS18255
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18255
old locus tag: J9260_18250
so part of: sequence
location: 27194..27463
location: region:27194-27463:1
so has part: feature:27194-27463:1:exon
subclass of: SO_0000010

position:27194:1
position: 27194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27463:1
position: 27463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27194-27463:1:exon

J9260_RS18255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18255
old locus tag: J9260_18250
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASTTKTFTISGSVWVNKEWEECLLVDVKANTVKQAMERFATKHKSFFLRHWKFEVHQWNSDKPDYFTFYRDLVSGKFQQENPVTANGV
SIO_010081: J9260_RS18255
subclass of: SO_0000673
so part of: J9260_RS18255
location: 27194..27463
location: region:27194-27463:1
so has part: feature:27194-27463:1:exon

WP_210220892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27194-27463:1:exon

J9260_RS18260
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18260
old locus tag: J9260_18255
so part of: sequence
location: complement(27541..29025)
location: region:27541-29025:-1
so has part: feature:27541-29025:-1:exon
subclass of: SO_0000010

position:27541:-1
position: 27541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29025:-1
position: 29025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27541-29025:-1:exon

J9260_RS18260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18260
old locus tag: J9260_18255
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSMFTNDTAAIFDAKARAVRAYHLMQWARWATFCLYIVAVFMLYVSDVWGIASFLENNSNEYSALAVFSVTSFILAYFLASSKEAVYEDIALNRSEGFHMTAGQRFAMVLFASAGILFELFSATSNQQHISNNAAEQVGLLKPAEVGSVAINTSPALTDALMKAQANLNKCQEMLKQGRVKDCHVSEGKVTGALKAIDMANQTAATVSGELVDKTNAHNEKLLERFDKPMFKVVGKAVGGDTNDGMIVAVAVMITIFELQHILAVFAYGNALRRMNADKLAKPPVATTKPEPTLQTGSASLLHKTGETIATEMAKAQQAREQVYHSAADTLDNLQVRESSGFKQSPEQLAKAMELAGMTYRTELRQGGQQFRDAPLDRPTPATPDYLKGSGTATPNKPATPTTPDYLKGSEKGEITHLYPLWIGGVVEGSVKVSESVFSDFVNTHVDSKQLGFNKAKLSEVWQQFGDRAVAEGKLTLNPEYVPGNRKQKYLLA
SIO_010081: J9260_RS18260
subclass of: SO_0000673
so part of: J9260_RS18260
location: complement(27541..29025)
location: region:27541-29025:-1
so has part: feature:27541-29025:-1:exon

WP_210220893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27541-29025:-1:exon

J9260_RS18265
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18265
old locus tag: J9260_18260
so part of: sequence
location: complement(29038..29382)
location: region:29038-29382:-1
so has part: feature:29038-29382:-1:exon
subclass of: SO_0000010

position:29038:-1
position: 29038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29382:-1
position: 29382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29038-29382:-1:exon

J9260_RS18265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18265
old locus tag: J9260_18260
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHTHDSNLRPSVREHFTDNHATTPRDTTVSTPNPPAPVDWALFFHVVVRLLAVTALLYIAYCIFTYFQLFGVSAIALSGQFALALFFTYAVLTGYDDAETLLICLGMFLLVGMF
SIO_010081: J9260_RS18265
subclass of: SO_0000673
so part of: J9260_RS18265
location: complement(29038..29382)
location: region:29038-29382:-1
so has part: feature:29038-29382:-1:exon

WP_210220894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29038-29382:-1:exon

J9260_RS18270
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18270
old locus tag: J9260_18265
so part of: sequence
location: complement(29473..30741)
location: region:29473-30741:-1
so has part: feature:29473-30741:-1:exon
subclass of: SO_0000010

position:29473:-1
position: 29473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30741:-1
position: 30741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29473-30741:-1:exon

J9260_RS18270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18270
old locus tag: J9260_18265
inference: COORDINATES: protein motif:HMM:NF013235.2
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MVKELRKQRRKLPRSSAIVTQSNELVSARYALPLGEMRLLFTVMSKVQPNDTKMTVYRIPVAEFADFLGVAKGSAYEEMKKITHSIVTRYVEIKSPGRLVQTTWMAQAEYVDGTGMVDVQLSEAMIPFLLNLKSNFTQYKLTMLLSFKSQYTLRLYMLLKQKRDHNPYAKTYDFELSELRKVLGVSIEAIPRQDKFDKPQAAMELYSEYPDFKRRVLETAKKELSAKADISFEYDEIRHGRRVASISFRVFPIQRPELFLQQPLTPAQTTLPGLDSDLDLVATLLSFVPEAHRAKKAVRATIEAAEQQQGFDYVKRNILYSNAHASKNYAGYLSGALAIDYGHDWEIEQQQAAKTAAPAAPPAVTLADLNNLINEIKALQQQSKAQGSAELWQQAELLKAEFAQKREMYDAANADKEDEAEA
SIO_010081: J9260_RS18270
subclass of: SO_0000673
so part of: J9260_RS18270
location: complement(29473..30741)
location: region:29473-30741:-1
so has part: feature:29473-30741:-1:exon

WP_281419501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29473-30741:-1:exon

J9260_RS18275
type: Gene
subclass of: SO_0000704
RO_0002162: 111769
locus tag: J9260_RS18275
old locus tag: J9260_18270
so part of: sequence
location: 31808..32155
location: region:31808-32155:1
so has part: feature:31808-32155:1:exon
subclass of: SO_0000010

position:31808:1
position: 31808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32155:1
position: 32155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31808-32155:1:exon

J9260_RS18275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 111769
locus tag: J9260_RS18275
old locus tag: J9260_18270
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKLGLAMLFMLAGCSMDYSVDLGNGYSYEHWGNNFIAHTVAGEMREVITGQVDSYLKKEAFVLVVQTAPAAPGKRYYVLDIGADNLQQFTAKTDFLQSAKQFGFTDVELQKLEK
SIO_010081: J9260_RS18275
subclass of: SO_0000673
so part of: J9260_RS18275
location: 31808..32155
location: region:31808-32155:1
so has part: feature:31808-32155:1:exon

WP_210220896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31808-32155:1:exon