Methanothrix harundinacea 6Ac plasmid pH6Ac, complete sequence.
Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia; Methanotrichales; Methanotrichaceae; Methanothrix.
The genome characteristics and predicted function of methyl-group oxidation pathway in the obligate aceticlastic methanogens, Methanosaeta spp
Submitted (01-NOV-2011) State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, A-516, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, P. R. China
REFSEQ INFORMATION: The reference sequence is identical to\nCP003118.1.\nBacteria and source DNA are available from Jinxing Zhu\n(zhujx@im.ac.cn) or Prof. Xiuzhu Dong (dongxz@im.ac.cn).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/12/2023 11:18:28\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,560\nCDSs (total) :: 2,509\nGenes (coding) :: 2,498\nCDSs (with protein) :: 2,498\nGenes (RNA) :: 51\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 46\nncRNAs :: 2\nPseudo Genes (total) :: 11\nCDSs (without protein) :: 11\nPseudo Genes (ambiguous residues) :: 0 of 11\nPseudo Genes (frameshifted) :: 3 of 11\nPseudo Genes (incomplete) :: 9 of 11\nPseudo Genes (internal stop) :: 0 of 11\nPseudo Genes (multiple problems) :: 1 of 11\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF013561.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
ribbon-helix-helix domain-containing protein
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: protein motif:HMM:NF019616.2
COORDINATES: similar to AA sequence:RefSeq:WP_013719440.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178252.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178253.1