Methanothrix harundinacea 6Ac plasmid pH6Ac, complete sequence.
type: Entry
definition: Methanothrix harundinacea 6Ac plasmid pH6Ac, complete sequence.
sequence version: NC_016637.1
sequence date: 2023-03-12
sequence: sequence
division: CON
label: NC_016637.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02603883
keyword: RefSeq
source: Methanothrix harundinacea 6Ac
organism: Methanothrix harundinacea 6Ac
taxonomy: Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia; Methanotrichales; Methanotrichaceae; Methanothrix.
reference: 1
references: 22590603
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP003118.1.\nBacteria and source DNA are available from Jinxing Zhu\n(zhujx@im.ac.cn) or Prof. Xiuzhu Dong (dongxz@im.ac.cn).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/12/2023 11:18:28\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,560\nCDSs (total) :: 2,509\nGenes (coding) :: 2,498\nCDSs (with protein) :: 2,498\nGenes (RNA) :: 51\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 46\nncRNAs :: 2\nPseudo Genes (total) :: 11\nCDSs (without protein) :: 11\nPseudo Genes (ambiguous residues) :: 0 of 11\nPseudo Genes (frameshifted) :: 3 of 11\nPseudo Genes (incomplete) :: 9 of 11\nPseudo Genes (internal stop) :: 0 of 11\nPseudo Genes (multiple problems) :: 1 of 11\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 11991
topology: circular
so has quality: SO_0000988
location: 1..11991
location: region:1-11991:1
RO_0002162: 1110509

NC_016637
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02603883
type: BioSample
SIO_000068: biosample

1
title: The genome characteristics and predicted function of methyl-group oxidation pathway in the obligate aceticlastic methanogens, Methanosaeta spp
author: Zhu, J.
author: Zheng, H.
author: Ai, G.
author: Zhang, G.
author: Liu, D.
author: Liu, X.
author: Dong, X.
journal: PLoS One 7 (5), e36756 (2012)
pubmed: 22590603

22590603
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Zhu, J.
author: Zheng, H.
author: Dong, X.
journal: Submitted (01-NOV-2011) State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, A-516, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, P. R. China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11991:1
position: 11991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-11991:1:source
so part of: sequence
organism: Methanothrix harundinacea 6Ac
mol type: genomic DNA
strain: 6Ac
plasmid: pH6Ac

1110509
type: Taxonomy
SIO_000068: taxonomy

MHAR_RS13825
type: Gene
subclass of: SO_0000704
RO_0002162: 1110509
locus tag: MHAR_RS13825
old locus tag: Mhar_2400
so part of: sequence
location: 1460..1606
location: region:1460-1606:1
so has part: feature:1460-1606:1:exon
subclass of: SO_0000010

58788889
type: Gene
SIO_000068: ncbigene

position:1460:1
position: 1460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1606:1
position: 1606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1460-1606:1:exon

MHAR_RS13825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110509
locus tag: MHAR_RS13825
old locus tag: Mhar_2400
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVVLKQFKPFLNQRKESGLFTSKGRIEAPDREIAARIEADHDRPGWW
SIO_010081: MHAR_RS13825
subclass of: SO_0000673
so part of: MHAR_RS13825
location: 1460..1606
location: region:1460-1606:1
so has part: feature:1460-1606:1:exon

WP_014271914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1460-1606:1:exon

MHAR_RS12690
type: Gene
subclass of: SO_0000704
RO_0002162: 1110509
locus tag: MHAR_RS12690
old locus tag: Mhar_2401
so part of: sequence
location: 1608..4982
location: region:1608-4982:1
so has part: feature:1608-4982:1:exon
subclass of: SO_0000010

25395455
type: Gene
SIO_000068: ncbigene

position:1608:1
position: 1608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4982:1
position: 4982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1608-4982:1:exon

MHAR_RS12690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110509
locus tag: MHAR_RS12690
old locus tag: Mhar_2401
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGLSIPPQFQAEGFRFVKLGSSGEGLKKPFEFFWDSLTLEDARRRYAEELAAAGGDRSKSKRLQAGEPSKLTNYGVDDPTLLQHLQRGGNYGIFNGTGPNGAGLATLDADNLPRLAELVDLSLLPPTMEAGRRGEDGEPIPERRHFHYLSDLEGRHLLRDPETGEVLGDLRGTGGFQVVGPGSLHPSGAVVEVLEERPLATINGDELLRILSPVLEAKTDTDRAKLEGLTKKRPPTTTDKDPFGDVSILDVIDVTGFKESGGQFFGEHPIHGSETGHNLVVSPAKNSWWCGRHDTGGGPALWLAVEGRIIDCSEARSGALRGERFLQTLDYARSRGRIPDEDRGRGESSTEEARDLLETLEEKLSEDPDGWAADPDVKRALAAYRRRDAVGAEALLKRAGIKGALKAALLTDLKRIDDEDGDDEKGGRGPSMATRIVDLALASGASFWKSPEGEAFATVPNGGGHIENHPLKSKAVKTWLSGLLYHAEGKAPKGSAVADALAVLEGEATFKGETFPVFVRFAEYGDKFYLDLGGDDWRAVEIDSAGWRVISSEAVPVKFRRSKGITSLPDPESNGDLEDLRLVLNVPKGAPWVLVRAWLVQAFKPTGPYPVLIVDGEQGSGKSWLGRILRAVVDPNKSPLRRPPRNEHEMMIAGSNSWLQNYDNLSGLPPWLGDAICVMSTGGGMSTRELYTDSEEALFDIQRPVILNGIDALTTRGDLLDRAILLHLPRIEAEDRRTEKEILAEVERIRPGVLGAVLGVISSGLRELPNVRLESKPRMADFAEWVVACEGALGWKPGEFLAAFETNQNESKVALIENDMFAVSLMEFVDGLPDPEKGVTDTAGGLLSILEARSNITASSMPAGWPKTAKGAGNKLRRIIPALRAIGIEVEFKTGHRKVRLIEIKRHTASEKDSTASAPRVPPPDGPPAGDGDGVHGVHGGGHPLTLTLDENIEKRERGKEREKGEGKDRKSPPPSPPQPQDDGFGGVHGVHGGDTEAMAGDSGPEAYQSIADNLEETARREAERLEHGRTPEPKGRSSAESDRPKKELSATKKDTPGERPSLSEPALKDLLDESGEITPERYVAKVGGTLGTATRQLDLAVIAYGWDRRKIGFSVIYGPGVRA
SIO_010081: MHAR_RS12690
subclass of: SO_0000673
so part of: MHAR_RS12690
location: 1608..4982
location: region:1608-4982:1
so has part: feature:1608-4982:1:exon

WP_014271915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1608-4982:1:exon

MHAR_RS13520
type: Gene
subclass of: SO_0000704
RO_0002162: 1110509
locus tag: MHAR_RS13520
old locus tag: Mhar_2402
so part of: sequence
location: 5375..5557
location: region:5375-5557:1
so has part: feature:5375-5557:1:exon
subclass of: SO_0000010

41009213
type: Gene
SIO_000068: ncbigene

position:5375:1
position: 5375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5557:1
position: 5557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5375-5557:1:exon

MHAR_RS13520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110509
locus tag: MHAR_RS13520
old locus tag: Mhar_2402
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPRLREMPATTGGDDLTAKPSDLGEELEALYHEADAVFEELVSILERARSICDELEEAGR
SIO_010081: MHAR_RS13520
subclass of: SO_0000673
so part of: MHAR_RS13520
location: 5375..5557
location: region:5375-5557:1
so has part: feature:5375-5557:1:exon

WP_143763564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5375-5557:1:exon

MHAR_RS12205
type: Gene
subclass of: SO_0000704
RO_0002162: 1110509
locus tag: MHAR_RS12205
so part of: sequence
location: 5651..5854
location: region:5651-5854:1
so has part: feature:5651-5854:1:exon
subclass of: SO_0000010

24833709
type: Gene
SIO_000068: ncbigene

position:5651:1
position: 5651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5854:1
position: 5854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5651-5854:1:exon

MHAR_RS12205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110509
locus tag: MHAR_RS12205
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLREPKDVRRVCQRITSTAFQEGRELEYSGRIAQLMGVWLKAFELEKLADIERRLSALEEAKDERK
SIO_010081: MHAR_RS12205
subclass of: SO_0000673
so part of: MHAR_RS12205
location: 5651..5854
location: region:5651-5854:1
so has part: feature:5651-5854:1:exon

WP_048145139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5651-5854:1:exon

MHAR_RS13830
type: Gene
subclass of: SO_0000704
RO_0002162: 1110509
locus tag: MHAR_RS13830
old locus tag: Mhar_2403
so part of: sequence
location: 5851..6024
location: region:5851-6024:1
so has part: feature:5851-6024:1:exon
subclass of: SO_0000010

58788890
type: Gene
SIO_000068: ncbigene

position:5851:1
position: 5851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6024:1
position: 6024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5851-6024:1:exon

MHAR_RS13830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110509
locus tag: MHAR_RS13830
old locus tag: Mhar_2403
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRYGYLLRRLDRLEPDPPWVDNDEDGFLSAVGALPGESAFEALERQAAEIWKDYDTI
SIO_010081: MHAR_RS13830
subclass of: SO_0000673
so part of: MHAR_RS13830
location: 5851..6024
location: region:5851-6024:1
so has part: feature:5851-6024:1:exon

WP_014271917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5851-6024:1:exon

MHAR_RS12210
type: Gene
subclass of: SO_0000704
RO_0002162: 1110509
locus tag: MHAR_RS12210
so part of: sequence
location: 6011..6319
location: region:6011-6319:1
so has part: feature:6011-6319:1:exon
subclass of: SO_0000010

24833710
type: Gene
SIO_000068: ncbigene

position:6011:1
position: 6011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6319:1
position: 6319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6011-6319:1:exon

MHAR_RS12210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110509
locus tag: MHAR_RS12210
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRFESLRSRLEDLEESAHGGMTPTTDGAGRRAWLEGSGLSLAFRLMTIQDEGGVIPDDLQREADLWSRAETEGHGQAAAMVKDLCIQIMMARGGMIDEGGH
SIO_010081: MHAR_RS12210
subclass of: SO_0000673
so part of: MHAR_RS12210
location: 6011..6319
location: region:6011-6319:1
so has part: feature:6011-6319:1:exon

WP_143763566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6011-6319:1:exon

MHAR_RS12215
type: Gene
subclass of: SO_0000704
RO_0002162: 1110509
locus tag: MHAR_RS12215
old locus tag: Mhar_2405
so part of: sequence
location: 6303..6494
location: region:6303-6494:1
so has part: feature:6303-6494:1:exon
subclass of: SO_0000010

11538293
type: Gene
SIO_000068: ncbigene

position:6303:1
position: 6303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6494:1
position: 6494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6303-6494:1:exon

MHAR_RS12215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110509
locus tag: MHAR_RS12215
old locus tag: Mhar_2405
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKAGIERRIRALEAERGPATIQTLRDYVVWLANREEGEERPPMDPELEAVLFNFGAGAGRDDS
SIO_010081: MHAR_RS12215
subclass of: SO_0000673
so part of: MHAR_RS12215
location: 6303..6494
location: region:6303-6494:1
so has part: feature:6303-6494:1:exon

WP_014271919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6303-6494:1:exon

MHAR_RS12220
type: Gene
subclass of: SO_0000704
RO_0002162: 1110509
locus tag: MHAR_RS12220
so part of: sequence
location: 6484..6681
location: region:6484-6681:1
so has part: feature:6484-6681:1:exon
subclass of: SO_0000010

24833711
type: Gene
SIO_000068: ncbigene

position:6484:1
position: 6484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6681:1
position: 6681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6484-6681:1:exon

MHAR_RS12220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110509
locus tag: MHAR_RS12220
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIAKLERRLAGLEAEIPHPPPKARPIMTEDDLLSLEPDELPDFSNTPEPLLRQIHEALIEEGAGG
SIO_010081: MHAR_RS12220
subclass of: SO_0000673
so part of: MHAR_RS12220
location: 6484..6681
location: region:6484-6681:1
so has part: feature:6484-6681:1:exon

WP_048145144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6484-6681:1:exon

MHAR_RS12225
type: Gene
subclass of: SO_0000704
RO_0002162: 1110509
locus tag: MHAR_RS12225
old locus tag: Mhar_2407
so part of: sequence
location: 6866..7378
location: region:6866-7378:1
so has part: feature:6866-7378:1:exon
subclass of: SO_0000010

11538279
type: Gene
SIO_000068: ncbigene

position:6866:1
position: 6866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7378:1
position: 7378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6866-7378:1:exon

MHAR_RS12225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110509
locus tag: MHAR_RS12225
old locus tag: Mhar_2407
inference: COORDINATES: protein motif:HMM:NF013561.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix domain-containing protein
translation: MESLRQYNVRLPEELIQTLQDVAKETGRDRAELVRDALKRYFDGELWRDETTERSSMPLFAKVEDLEKRVRRLEIAQPAIQAIQTTAKRDIQTARKDTLLPINAAEPKVEPEAKPTIQRLSEDLATQEKIKKIWQAGERNRQNIARQVGYKDRTVQQYIKDCLDSGELEK
SIO_010081: MHAR_RS12225
subclass of: SO_0000673
so part of: MHAR_RS12225
location: 6866..7378
location: region:6866-7378:1
so has part: feature:6866-7378:1:exon

WP_014271921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6866-7378:1:exon

MHAR_RS13110
type: Gene
subclass of: SO_0000704
RO_0002162: 1110509
locus tag: MHAR_RS13110
old locus tag: Mhar_2408
so part of: sequence
location: complement(7410..7829)
location: region:7410-7829:-1
so has part: feature:7410-7829:-1:exon
subclass of: SO_0000010

31812431
type: Gene
SIO_000068: ncbigene

position:7410:-1
position: 7410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7829:-1
position: 7829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7410-7829:-1:exon

MHAR_RS13110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110509
locus tag: MHAR_RS13110
old locus tag: Mhar_2408
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNGKIFAVFLVMLLVTTPSLARFPQPEDGVWVVTQTQSGLATVTTVYQGNITEIKDGLLCLNCTGDLPGFEWVAKFMTQYDDTYEYFYLTPIKNNTLGIEIIPPVNICIGTASVVALVWADECRPVMEGDPEYYPYGSN
SIO_010081: MHAR_RS13110
subclass of: SO_0000673
so part of: MHAR_RS13110
location: complement(7410..7829)
location: region:7410-7829:-1
so has part: feature:7410-7829:-1:exon

WP_014271922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7410-7829:-1:exon

MHAR_RS12230
type: Gene
subclass of: SO_0000704
RO_0002162: 1110509
locus tag: MHAR_RS12230
so part of: sequence
location: complement(8200..8589)
location: region:8200-8589:-1
so has part: feature:8200-8589:-1:exon
subclass of: SO_0000010

24833712
type: Gene
SIO_000068: ncbigene

position:8200:-1
position: 8200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8589:-1
position: 8589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8200-8589:-1:exon

MHAR_RS12230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110509
locus tag: MHAR_RS12230
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEILARLAAVEEENRQLRQEVEALRRDHADHRETVGREIASDRRRITALETPAPALREKTAEDHVNRLFSEMRRLNIRQTTAKDAARLLGVSKPLIDKLKPYLATDPRFLILRDPHHKQRHLIRLAGT
SIO_010081: MHAR_RS12230
subclass of: SO_0000673
so part of: MHAR_RS12230
location: complement(8200..8589)
location: region:8200-8589:-1
so has part: feature:8200-8589:-1:exon

WP_143763568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8200-8589:-1:exon

MHAR_RS13835
type: Gene
subclass of: SO_0000704
RO_0002162: 1110509
locus tag: MHAR_RS13835
old locus tag: Mhar_2410
so part of: sequence
location: complement(8715..8882)
location: region:8715-8882:-1
so has part: feature:8715-8882:-1:exon
subclass of: SO_0000010

58788891
type: Gene
SIO_000068: ncbigene

position:8715:-1
position: 8715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8882:-1
position: 8882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8715-8882:-1:exon

MHAR_RS13835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110509
locus tag: MHAR_RS13835
old locus tag: Mhar_2410
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVKTTVTMTDRTAAALRFYIGKEGLGMRAQSQVIETALKDFLRDRGIDVEKYGD
SIO_010081: MHAR_RS13835
subclass of: SO_0000673
so part of: MHAR_RS13835
location: complement(8715..8882)
location: region:8715-8882:-1
so has part: feature:8715-8882:-1:exon

WP_187287876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8715-8882:-1:exon

MHAR_RS12235
type: Gene
subclass of: SO_0000704
RO_0002162: 1110509
locus tag: MHAR_RS12235
old locus tag: Mhar_2411
so part of: sequence
location: 9045..9725
location: region:9045-9725:1
so has part: feature:9045-9725:1:exon
subclass of: SO_0000010

11538283
type: Gene
SIO_000068: ncbigene

position:9045:1
position: 9045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9725:1
position: 9725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9045-9725:1:exon

MHAR_RS12235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110509
locus tag: MHAR_RS12235
old locus tag: Mhar_2411
inference: COORDINATES: protein motif:HMM:NF012774.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thermonuclease family protein
translation: MITRLNPILALLVLASLMPILAAAAPDEASGIVTNVVDGDTFDLRIDKTDPRIIYEIERVRLADVDSPEMSTPEGEPAKVFATDTLLGQRVWLDIDNTSGDGRDPYNRLLAVVYLEDLNGTINTSHPFNRMLVDAGFAVVKNFTNNEFDPAAWWGNATTEPEPDEVNETATTTTEGQFVGSTKSDKYHYPSCRWAEKILPENEIWFASSEEARAAGYIPCGVCNPP
SIO_010081: MHAR_RS12235
subclass of: SO_0000673
so part of: MHAR_RS12235
location: 9045..9725
location: region:9045-9725:1
so has part: feature:9045-9725:1:exon

WP_048145148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9045-9725:1:exon

MHAR_RS12240
type: Gene
subclass of: SO_0000704
RO_0002162: 1110509
locus tag: MHAR_RS12240
so part of: sequence
location: 9722..10144
location: region:9722-10144:1
so has part: feature:9722-10144:1:exon
subclass of: SO_0000010

24833713
type: Gene
SIO_000068: ncbigene

position:9722:1
position: 9722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10144:1
position: 10144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9722-10144:1:exon

MHAR_RS12240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110509
locus tag: MHAR_RS12240
inference: COORDINATES: protein motif:HMM:NF019616.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1699 family protein
translation: MKIRIINSSKEISRLDPKERVVHVSFPLTTSALLELAKKCPKLEGIQVPPSRLANMGGRSLILLEVLGVRIFEGSIQGYRTDRAEYITIDDGLILQRAGELRAEGWTPGRSWRKWLRRRGSRRGWWGSSWIRGLRPSPLR
SIO_010081: MHAR_RS12240
subclass of: SO_0000673
so part of: MHAR_RS12240
location: 9722..10144
location: region:9722-10144:1
so has part: feature:9722-10144:1:exon

WP_048145150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9722-10144:1:exon

MHAR_RS12245
type: Gene
subclass of: SO_0000704
RO_0002162: 1110509
locus tag: MHAR_RS12245
old locus tag: Mhar_2412
so part of: sequence
location: complement(10161..10772)
location: region:10161-10772:-1
so has part: feature:10161-10772:-1:exon
subclass of: SO_0000010

11538284
type: Gene
SIO_000068: ncbigene

position:10161:-1
position: 10161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10772:-1
position: 10772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10161-10772:-1:exon

MHAR_RS12245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110509
locus tag: MHAR_RS12245
old locus tag: Mhar_2412
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013719440.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAITEVIALAHELEDLLNAPASDIMEAILKGFRAQVDVKGKLAELYLYRYLEGLENQGTIQSLEWRDKDGHPDFAFESKGKSYQMECKNLRNEVYKKPEFSYKVEIQRTRNSKDGSNTRSYRADYFDILAVCTFNQTDKWDFMFIRADDLEIVKDNPELLKIMQRVPTKITNPWKKDLIDVLNSFGEEWSSKSGNRSPLQRTL
SIO_010081: MHAR_RS12245
subclass of: SO_0000673
so part of: MHAR_RS12245
location: complement(10161..10772)
location: region:10161-10772:-1
so has part: feature:10161-10772:-1:exon

WP_014271926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10161-10772:-1:exon

MHAR_RS14000
type: Gene
subclass of: SO_0000704
RO_0002162: 1110509
locus tag: MHAR_RS14000
old locus tag: Mhar_2413
so part of: sequence
location: 10848..11042
location: region:10848-11042:1
so has part: feature:10848-11042:1:exon
subclass of: SO_0000010

68748894
type: Gene
SIO_000068: ncbigene

position:10848:1
position: 10848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11042:1
position: 11042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10848-11042:1:exon

MHAR_RS14000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110509
locus tag: MHAR_RS14000
old locus tag: Mhar_2413
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019178252.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLKRKRVQVVFTVEQWALIEKFRGDLGDGDAEIVRNIVLAWLSEKSIISTNAKAKMSNPLPSR
SIO_010081: MHAR_RS14000
subclass of: SO_0000673
so part of: MHAR_RS14000
location: 10848..11042
location: region:10848-11042:1
so has part: feature:10848-11042:1:exon

WP_014271927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10848-11042:1:exon

MHAR_RS12255
type: Gene
subclass of: SO_0000704
RO_0002162: 1110509
locus tag: MHAR_RS12255
old locus tag: Mhar_2414
so part of: sequence
location: 11066..11986
location: region:11066-11986:1
so has part: feature:11066-11986:1:exon
subclass of: SO_0000010

11538286
type: Gene
SIO_000068: ncbigene

position:11066:1
position: 11066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11986:1
position: 11986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11066-11986:1:exon

MHAR_RS12255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110509
locus tag: MHAR_RS12255
old locus tag: Mhar_2414
EC number: 2.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019178253.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific DNA-methyltransferase
translation: MPLLDLGLENPFKSIISAKPYYFTEYGSAYLGEALDIMSEIPDSTLNLIVTSPPYALVFKKEYGNVDAQDYVKWFMGFAQEFHRVLKDDGSLVINIGGSWNKGVPTRSTYHFELIIELAKVFHLAQEFYWYNPAKLPSPAEWVTVRRIRVKDSVELVLWFSKSPYPKADNRSVLQPYSKDMQRIIEKGYVAKKRPSGHNITSKFRRDNNGAIPPNVLQVGNTDSSSPYLKKCKECGMKPHPARFPKDLPQFFVDFLTEPGDIVMDPFCGSNVTGFVAENSKRKWIAIDTVEEYLMGSEFRFPRVYK
SIO_010081: MHAR_RS12255
subclass of: SO_0000673
so part of: MHAR_RS12255
location: 11066..11986
location: region:11066-11986:1
so has part: feature:11066-11986:1:exon

WP_048145152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11066-11986:1:exon