Tistrella mobilis KA081020-065 plasmid pTM4, complete sequence.
type: Entry
definition: Tistrella mobilis KA081020-065 plasmid pTM4, complete sequence.
sequence version: NC_017959.1
sequence date: 2023-02-06
sequence: sequence
division: CON
label: NC_017959.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02603926
keyword: RefSeq
source: Tistrella mobilis KA081020-065
organism: Tistrella mobilis KA081020-065
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Geminicoccaceae; Tistrella.
reference: 1
references: 22458477
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP003240.1.\nSource DNA is available from Dr.Ying Xu, boxuying@ust.hk.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/05/2023 20:00:23\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,915\nCDSs (total) :: 5,845\nGenes (coding) :: 5,761\nCDSs (with protein) :: 5,761\nGenes (RNA) :: 70\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 55\nncRNAs :: 3\nPseudo Genes (total) :: 84\nCDSs (without protein) :: 84\nPseudo Genes (ambiguous residues) :: 0 of 84\nPseudo Genes (frameshifted) :: 40 of 84\nPseudo Genes (incomplete) :: 43 of 84\nPseudo Genes (internal stop) :: 8 of 84\nPseudo Genes (multiple problems) :: 6 of 84\nCRISPR Arrays :: 7\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 83885
topology: circular
so has quality: SO_0000988
location: 1..83885
location: region:1-83885:1
RO_0002162: 1110502

NC_017959
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02603926
type: BioSample
SIO_000068: biosample

1
title: Bacterial biosynthesis and maturation of the didemnin anti-cancer agents
author: Xu, Y.
author: Kersten, R.D.
author: Nam, S.J.
author: Lu, L.
author: Al-Suwailem, A.M.
author: Zheng, H.
author: Fenical, W.
author: Dorrestein, P.C.
author: Moore, B.S.
author: Qian, P.Y.
journal: J Am Chem Soc
volume: 134
issue: 20
pages: 8625-8632
year: 2012
pubmed: 22458477

22458477
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Xu, Y.
author: Fenical, W.
author: Nam, S.
author: Yang, J.
author: Lai, P.
author: Wang, S.
author: Zheng, H.
author: Qian, P.
journal: Submitted (03-NOV-2011) Division of Life Science, the Hong Kong University of Science and Technology, Room 6321, Division of Life Science, the Hong Kong University of Science and Technology, Clear Water Bay, Hong Kong, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83885:1
position: 83885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-83885:1:source
so part of: sequence
organism: Tistrella mobilis KA081020-065
mol type: genomic DNA
strain: KA081020-065
plasmid: pTM4

1110502
type: Taxonomy
SIO_000068: taxonomy

TMO_RS28515
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28515
old locus tag: TMO_d0001
so part of: sequence
location: 85..1233
location: region:85-1233:1
so has part: feature:85-1233:1:exon
subclass of: SO_0000010

position:85:1
position: 85
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1233:1
position: 1233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85-1233:1:exon

TMO_RS28515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28515
old locus tag: TMO_d0001
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: sel1 repeat family protein
translation: MLTCRIEGHDREASVAIAGDSAVYRYGPPGGQAELTLTTPLADLDYRRNSGAGDTIDEVVTFNNGNTAYRVAAGFRDGLAPDPSALVPFGRLTVFRNGKSLARLTCRPDSVRRTHDLLLSRMRAIGREQTSDGEPFPNYPIDYPAPADQSPPCEAQSNVDSCWSRGVAAARGGDLRAALGHYDMSCDAGFNDLGCYEAGKIYLHSRALRDYARATARLTRVCEGDDPGQGPYACKYLGWMSLTGTGTARDLDGAWDRLAKACFLHNGMITIDPEGCHFLAETIRAVQKTPVPGLPDSDFLAYVALAQGCTDDAETVCDEARTFYATAAARGATWITSCDEIVRARNLFDSCRQMTAAPADYEEMMALRRKLVAVFREELDVE
SIO_010081: TMO_RS28515
subclass of: SO_0000673
so part of: TMO_RS28515
location: 85..1233
location: region:85-1233:1
so has part: feature:85-1233:1:exon

WP_145978537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85-1233:1:exon

TMO_RS28520
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
gene: arr
locus tag: TMO_RS28520
old locus tag: TMO_d0002
so part of: sequence
location: complement(1275..1691)
location: region:1275-1691:-1
so has part: feature:1275-1691:-1:exon
subclass of: SO_0000010

position:1275:-1
position: 1275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1691:-1
position: 1691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1275-1691:-1:exon

TMO_RS28520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
gene: arr
locus tag: TMO_RS28520
old locus tag: TMO_d0002
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005811445.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(+)--rifampin ADP-ribosyltransferase
translation: MTIDKTGPVPVLYHGTKVDLKPGDLIRPGFASNFGQRRTAAFVYMTATLDAAIWGAELAIGDGPGRICTVEPTGPFEDDPNLTDQKFPGNPTRSYRTRAPLRVTGEVATWSGHPADRLQAMKDHLEDLKHRGIEAIED
SIO_010081: TMO_RS28520
subclass of: SO_0000673
so part of: TMO_RS28520
location: complement(1275..1691)
location: region:1275-1691:-1
so has part: feature:1275-1691:-1:exon

WP_041608237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1275-1691:-1:exon

TMO_RS28525
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28525
old locus tag: TMO_d0003
so part of: sequence
location: complement(1702..2205)
location: region:1702-2205:-1
so has part: feature:1702-2205:-1:exon
subclass of: SO_0000010

position:1702:-1
position: 1702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2205:-1
position: 2205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1702-2205:-1:exon

TMO_RS28525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28525
old locus tag: TMO_d0003
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009756288.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VOC family protein
translation: MTSLVTCLWYDHGEARKAAAFYAATFPDSHIDRINLAAADYPGGREGTELTVEFTVLGRKFVGLNGGPIFTPNESVSFMVITEDQEETDRYWNAILDNGGQESACGWCKDLWGHSWQITPRLLLELTTGSNARTAKRAFEAMMTMKKIDIATLEAAASAGGADEQPG
SIO_010081: TMO_RS28525
subclass of: SO_0000673
so part of: TMO_RS28525
location: complement(1702..2205)
location: region:1702-2205:-1
so has part: feature:1702-2205:-1:exon

WP_014748544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1702-2205:-1:exon

TMO_RS28530
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28530
old locus tag: TMO_d0004
so part of: sequence
location: complement(2255..3391)
location: region:2255-3391:-1
so has part: feature:2255-3391:-1:exon
subclass of: SO_0000010

position:2255:-1
position: 2255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3391:-1
position: 3391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2255-3391:-1:exon

TMO_RS28530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28530
old locus tag: TMO_d0004
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011582257.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DJ-1/PfpI family protein
translation: MSISGAIRGGLALALLGLAGFSGWIFSLPAATLTAEAPAVPPEEAAAMLAVLRQEGDDRPVIAVVGLNDATETNDYIATTGILRRADIADVVMLATGPGAVRLYPALRVQPDATIAAFDADHPQGADYVIVPAMSRDDDPVVMAWLQDQFRKGARIIAVCAGAKVVAAAGLLDGRRATTHWYYRAEMLERNPGIDYAANRRMVFDGKVVTTTGITAVMPMMLTLIEAIGGRSKAEAVARDLGVDGWDARHASAAFAMTRPFAITVLANRLAMWNRDSWGIDLLPGLDEVSLALVADAWSRTYRSQAVTLSGNTAAVESLNGIHILPDSGHDGWPAERRLPISPDERPADALDRALETITDRYGEATANVVAMQLEYPR
SIO_010081: TMO_RS28530
subclass of: SO_0000673
so part of: TMO_RS28530
location: complement(2255..3391)
location: region:2255-3391:-1
so has part: feature:2255-3391:-1:exon

WP_014748545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2255-3391:-1:exon

TMO_RS28535
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28535
old locus tag: TMO_d0005
so part of: sequence
location: 3495..4505
location: region:3495-4505:1
so has part: feature:3495-4505:1:exon
subclass of: SO_0000010

position:3495:1
position: 3495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4505:1
position: 4505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3495-4505:1:exon

TMO_RS28535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28535
old locus tag: TMO_d0005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019403714.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MHHVVFITYPGFELLDVSGPASVFNGANHALGRQGRSAFYKVGLVSAKGGGIESSSGIVVDTMPIADLRPGDNQQKGDDQTILVAGAERAPLLAALADPALRSALPACVATAGRFGSVCSGGFLLATLGLLDGHRVASHWDACKPLAESFPAVTVDPDALYVVDGRLWTSAGVTTGIDMALAMIACDLDRMIAGDVAKRLILYARRPGYQSQFSPVLQAQVRGDSPFAELIGWIQANLDAPLDVPSLAERAGLSERSFHRKFVAATGETPARFVETVRLDTARLLLSRGLPLKLVAAKVGLTPVARLSDAFGRRFGMAPRLFRYMHAGTPGHDVAS
SIO_010081: TMO_RS28535
subclass of: SO_0000673
so part of: TMO_RS28535
location: 3495..4505
location: region:3495-4505:1
so has part: feature:3495-4505:1:exon

WP_014748546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3495-4505:1:exon

TMO_RS30125
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS30125
old locus tag: TMO_d0006
so part of: sequence
location: complement(4697..6703)
location: region:4697-6703:-1
so has part: feature:4697-6703:-1:exon
subclass of: SO_0000010

position:4697:-1
position: 4697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6703:-1
position: 6703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4697-6703:-1:exon

TMO_RS30125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS30125
old locus tag: TMO_d0006
inference: COORDINATES: protein motif:HMM:NF014567.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MASETSSDIDPPAAGPAVPPIRRLRRPMTGWVALTAYALVLGAAGAGLMVQYQDRLNHQIDLRQARLRTGGDVITTTARVAAAEIDALGTAAAQAMDRPPVLRLPFLRENDRFEVPPGPGMTGRLTGRLPDDPSTMPALLDEMAAVATIEPFVLGALRQLPESAWIYYMSARRFLLLYPFGAGDAARYSDALMSAELMVRARPDTNPTGRTFWTAPYEDLGGKGRIVSIVRPVIAAGATLPAGFRGVIGIDLTEQALARMLDDMDLPDGTQMLIDEAGHVIALSARDGDLPAVDDTGMPDRIWQAAGGTGDLAARMDAQARGVLKPAGAAALFHTRIAGTPWSLIHIDAMSGLKTTVLTAMWPEALATLLLMMILGAFESHRRMLRRLSHHRTALALRVEELDRARQDLAAARDEAEAANLAKTAFLAHMSHELRTPLNAVIGMAETLKAEVFGPLGPKQMEYAGDIAGAGSHLLELINDLLDLARIEAGEATLDEETVSVDDIVRPVIAIVSARARKAGHVLHLMTPSRPVAVSCDSRKMRQVLINLLTNAVKFTPDGGRISLVVRLMPDRSLTFTVTDNGPGMRPEEIPEALKPFRRVESDPLVRRKEGTGLGLAIVASFIRLHDGTLDIASRPGDGTRVTCHLPARRTVLVDSVSSMSAGDGNRQ
SIO_010081: TMO_RS30125
subclass of: SO_0000673
so part of: TMO_RS30125
location: complement(4697..6703)
location: region:4697-6703:-1
so has part: feature:4697-6703:-1:exon

WP_014748547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4697-6703:-1:exon

TMO_RS28545
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
gene: ruvX
locus tag: TMO_RS28545
old locus tag: TMO_d0007
so part of: sequence
location: complement(6823..7431)
location: region:6823-7431:-1
so has part: feature:6823-7431:-1:exon
subclass of: SO_0000010

position:6823:-1
position: 6823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7431:-1
position: 7431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6823-7431:-1:exon

TMO_RS28545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
gene: ruvX
locus tag: TMO_RS28545
old locus tag: TMO_d0007
EC number: 3.1.21.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019644795.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0008150 - biological_process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Holliday junction resolvase RuvX
translation: MTNRNPASEADSEADSGAGPEAPSKPAPKPDLTPWQLARMLPAKGRIMGLDVGTKTVGIAVSDELRRVATPIELIRRTKFRVDAARMAAIVRERGVVAVVLGLPVNMDGTEGPRCQSIRQFRENLAQFLTADGIDLPMMFWDERWSTAAVQRYMIDADMSRKRRAELVDKAAAGYILDGALDAMNRPPPIWAREEDEDAGDT
SIO_010081: TMO_RS28545
subclass of: SO_0000673
so part of: TMO_RS28545
location: complement(6823..7431)
location: region:6823-7431:-1
so has part: feature:6823-7431:-1:exon

WP_014748548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6823-7431:-1:exon

TMO_RS28550
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
gene: gatC
locus tag: TMO_RS28550
old locus tag: TMO_d0008
so part of: sequence
location: 7647..7934
location: region:7647-7934:1
so has part: feature:7647-7934:1:exon
subclass of: SO_0000010

position:7647:1
position: 7647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7934:1
position: 7934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7647-7934:1:exon

TMO_RS28550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
gene: gatC
locus tag: TMO_RS28550
old locus tag: TMO_d0008
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011390925.1
GO component: GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO function: GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
translation: MTLDRAAVRKIATLARLDVPEDELDGYARELGGILDWVEQLREVDTQGVAPMTGAADKGLPQRPDVVTDGNCRDKVMANNPAGDPVFFVVPKVVE
SIO_010081: TMO_RS28550
subclass of: SO_0000673
so part of: TMO_RS28550
location: 7647..7934
location: region:7647-7934:1
so has part: feature:7647-7934:1:exon

WP_014748549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7647-7934:1:exon

TMO_RS28555
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
gene: gatA
locus tag: TMO_RS28555
old locus tag: TMO_d0009
so part of: sequence
location: 7940..9433
location: region:7940-9433:1
so has part: feature:7940-9433:1:exon
subclass of: SO_0000010

position:7940:1
position: 7940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9433:1
position: 9433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7940-9433:1:exon

TMO_RS28555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
gene: gatA
locus tag: TMO_RS28555
old locus tag: TMO_d0009
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019013137.1
GO component: GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO function: GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
translation: MTTRPTDFTIAGAAEALAKGDISSRELTRAHLDAMAATRSLNAFVVETPEIALARADEADARRVRGEALGPMDGVPVAIKDLFCTEGVATTASSKILDGFVPPYESTVSANLKAAGAVMLGKTSMDEFAMGSANITAATGPVRNPWGPEGDAFLVPGGSSGGSAAAVAARSAIAATGSDTGGSIRQPAAYCGLVGLKPTYGRCSRWGMIAFASSLDQAGPITRTVEDAAIMLGTMAGHDPKDSTSADIAVPDFRAAVNRGVKGLKIGIPKEYRVDGMPAEIEKLWADGVAMLKAAGAEIVDISLPHTKYALATYYIVAPAEASSNLARYDGVRYGHRTKANVSSLAEMYEKTRAEGFGREVKRRIMIGTYVLSAGYYDAYYLKAQQVRTRIAADFAAAFDQVDAILAPTAPSAAFRFGEKMDDPVQMYLTDVFTVPASLAGLPAISVPGGIGESGLPLGLQVIGRSFDEETVLAVGRAIEEASGFDGVPAMVREMRG
SIO_010081: TMO_RS28555
subclass of: SO_0000673
so part of: TMO_RS28555
location: 7940..9433
location: region:7940-9433:1
so has part: feature:7940-9433:1:exon

WP_041608239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7940-9433:1:exon

TMO_RS28560
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
gene: gatB
locus tag: TMO_RS28560
old locus tag: TMO_d0010
so part of: sequence
location: 9430..10881
location: region:9430-10881:1
so has part: feature:9430-10881:1:exon
subclass of: SO_0000010

position:9430:1
position: 9430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10881:1
position: 10881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9430-10881:1:exon

TMO_RS28560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
gene: gatB
locus tag: TMO_RS28560
old locus tag: TMO_d0010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014188022.1
GO function: GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
translation: MSLIRGNTGDWEIVIGLEVHAQVSSNAKLFSGAATAYGAEPNTQVSLIDAAMPGMLPVINEWCVAQAVRTGIALNAQINRHSVFDRKNYFYPDLPQGYQISQFKQPIVGEGRMVIDLDDGETMTVGIERLHLEQDAGKSMHDQRPGETLIDLNRSGVALMEIVSKPDMRSPEQAGAYMRKLRTILRYIGSCDGNMEEGSLRCDANVSVRRPGGPLGTRCEIKNLNSIRHIMRAIEFEAHRQIGIIEDGGSISQETRLYDVNKGETRTMRSKEEAHDYRYFPDPDLLPLKFDEAFVETQRAALPELPDAKKARFQDQYGLSAYDAGVLVGEQVSADFFETAAKGRDAKLVANWMSTELFGALNRLSKGIEESPVSAEALGGLVDLIQDGTISGRIAKEVFAEMLETGETAGQVVERKGLKQVSDEGAIAAAIDQVIAANPDKLAEYKGGKTKLAGFFVGQVMKATGGKANPQVVNKLLNDKLNA
SIO_010081: TMO_RS28560
subclass of: SO_0000673
so part of: TMO_RS28560
location: 9430..10881
location: region:9430-10881:1
so has part: feature:9430-10881:1:exon

WP_014748551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9430-10881:1:exon

TMO_RS28565
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28565
old locus tag: TMO_d0011
so part of: sequence
location: 11112..11450
location: region:11112-11450:1
so has part: feature:11112-11450:1:exon
subclass of: SO_0000010

position:11112:1
position: 11112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11450:1
position: 11450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11112-11450:1:exon

TMO_RS28565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28565
old locus tag: TMO_d0011
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVLLCAALAQVLGLIVHLPMAIAMELAPGQVQEICSPTAPDTRRDDRGPLPGMVCHDCLAAQMAMPPADVPPVPLRIGSFILPSMLPPAGLPAVTAAVSPVPARAPPLSES
SIO_010081: TMO_RS28565
subclass of: SO_0000673
so part of: TMO_RS28565
location: 11112..11450
location: region:11112-11450:1
so has part: feature:11112-11450:1:exon

WP_014748552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11112-11450:1:exon

TMO_RS28570
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28570
old locus tag: TMO_d0012
so part of: sequence
location: 11505..12014
location: region:11505-12014:1
so has part: feature:11505-12014:1:exon
subclass of: SO_0000010

position:11505:1
position: 11505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12014:1
position: 12014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11505-12014:1:exon

TMO_RS28570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28570
old locus tag: TMO_d0012
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014188971.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper chaperone PCu(A)C
translation: MSIISRTLRTGLAAAALIIAAGTASAHEYKLGELHIGHPWARASVNVGGTAGAFLTVENNGSTSDRLVAVSTPVAEVAEIHESFEDKGVMRMRRVEGIEIPAGGEAKLAPGGYHIMLIKLKQAIMPGEKVPATLTFEKAGTIDVELAIEKPGAGADMGHDHKKMDHSAH
SIO_010081: TMO_RS28570
subclass of: SO_0000673
so part of: TMO_RS28570
location: 11505..12014
location: region:11505-12014:1
so has part: feature:11505-12014:1:exon

WP_014748553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11505-12014:1:exon

TMO_RS28575
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28575
old locus tag: TMO_d0013
so part of: sequence
location: 12042..12503
location: region:12042-12503:1
so has part: feature:12042-12503:1:exon
subclass of: SO_0000010

position:12042:1
position: 12042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12503:1
position: 12503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12042-12503:1:exon

TMO_RS28575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28575
old locus tag: TMO_d0013
EC number: 2.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017517391.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MTADALTIRQAGAGDAEAISAVILRALWETNAADYTPEIISAVAAGFSPEAITRLMAGRRVLVAVYAADVVGTASLDGNVVRSVFVSPDCQRRGIGMALMTAVEALARAVASPRLLVPSSVTAEGFYARLGFIALRDEWHGAERTIVMEKPLA
SIO_010081: TMO_RS28575
subclass of: SO_0000673
so part of: TMO_RS28575
location: 12042..12503
location: region:12042-12503:1
so has part: feature:12042-12503:1:exon

WP_014748554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12042-12503:1:exon

TMO_RS28580
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28580
old locus tag: TMO_d0014
pseudo: true
so part of: sequence
location: 12528..>12779
location: region:12528-12779:1
so has part: feature:12528-12779:1:exon
subclass of: SO_0000010

position:12528:1
position: 12528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12779:1
position: 12779
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12528-12779:1:exon

TMO_RS28580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28580
old locus tag: TMO_d0014
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019092586.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicB family antitoxin
SIO_010081: TMO_RS28580
subclass of: SO_0000673
so part of: TMO_RS28580
location: 12528..>12779
location: region:12528-12779:1
so has part: feature:12528-12779:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12528-12779:1:exon

TMO_RS31465
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS31465
old locus tag: TMO_d0015
so part of: sequence
location: complement(12971..13165)
location: region:12971-13165:-1
so has part: feature:12971-13165:-1:exon
subclass of: SO_0000010

position:12971:-1
position: 12971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13165:-1
position: 13165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12971-13165:-1:exon

TMO_RS31465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS31465
old locus tag: TMO_d0015
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAIHPLSGDYDGSSLMQWLQNFTAEVILDRNFNKTAAKRQSLSKPDDDDINEYCRPGDGSITSV
SIO_010081: TMO_RS31465
subclass of: SO_0000673
so part of: TMO_RS31465
location: complement(12971..13165)
location: region:12971-13165:-1
so has part: feature:12971-13165:-1:exon

WP_145978538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12971-13165:-1:exon

TMO_RS32515
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS32515
so part of: sequence
location: complement(13722..14330)
location: region:13722-14330:-1
so has part: feature:13722-14330:-1:exon
subclass of: SO_0000010

position:13722:-1
position: 13722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14330:-1
position: 14330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13722-14330:-1:exon

TMO_RS32515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS32515
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDIKPQQLNEPVEIQIETRHQLDGRTGFQLVRHAVEAAQSGRVALRRNAGILGEQGDFAAAARCLVHSTGQPQKPRLIAGEAEIGAEREYASGRPRGNVVERRAADLAERRPRRRCRFIEGQRDRIKGHADIDRAQPRRQHLVDQLDGGDFLLEAGFAQHEPGKIRPPHLQPAGAPLRRRDADLLIQPHSDAIEIAQIGSG
SIO_010081: TMO_RS32515
subclass of: SO_0000673
so part of: TMO_RS32515
location: complement(13722..14330)
location: region:13722-14330:-1
so has part: feature:13722-14330:-1:exon

WP_228382397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13722-14330:-1:exon

TMO_RS28585
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28585
old locus tag: TMO_d0016
so part of: sequence
location: 14628..20768
location: region:14628-20768:1
so has part: feature:14628-20768:1:exon
subclass of: SO_0000010

position:14628:1
position: 14628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20768:1
position: 20768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14628-20768:1:exon

TMO_RS28585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28585
old locus tag: TMO_d0016
inference: COORDINATES: protein motif:HMM:NF036757.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: neuraminidase-like domain-containing protein
translation: MLAGWRLYRDAFDLGPEAYAALFGEICPFWRADMVVAGAEGVTPGLEQTEISFLRTLFGEDAPALHQTITEAATPIDDTGLADMVCRGLRLSAVELDALADALDADFALKTVVDARGLGALYRLATVFRMVGWPLLSGLRLVTLVSGQSTPDNQLLRGLTVRNETADGTARLCTALDQIIELARWMTEAELSPDALLALLTPATTGGPRASEADRRWLDDLAAAVAPVLGRADSFRGFETWDSRDAPAVTIPGEAWHEHMRTAGALYREAGVFYPDMDRAAMSAICRDFLRDGHAVDPDLDGNIVRLDRLLTRLEKARDAQALTLERALRTFGTTLTASGAGALVIWAQTTSLDALDALLAGADDINAQLRLRELQRHAAAVDALALGDVDLQILAWRPDWLAPKAAESGADRQRPRALCLEQLVACHRFATLQVGAATDDAWLGYLTVARDGRPGPEATAEDIAIWRTACNDMLAILLGCPAVDVLDYLAVLAGPDGVADDLETVDAVARHARLAEDLRIGGADLVVFREVGSPRACGDWMAAATAAQAGLARFKGGSQMAGFRRALAEVKRDALVAAYMCTTIAADPDLAAEVTDREALYGHLLLDVQVTSAVPTSRLVEATSALQLYISRALNGLERGVGFVDRPALAAEWRLNRYYRQWEANQKLLLYPQNYIEPELRQITSPEFDDLLRAISGGDVSEDGVEAAVTAYMTGLADCCDLSLCSIYVERGGGSTSGHAIYHFLATAHWESGRFFYRKLTVDYTAIAALAGPSQYLKALDWTFWQEVTVPKTHDLLSDVTLCFFLNRYYLFWLEIEERKGEASDSDAVSWRIHPRYMRCDANALTGVTHAPGLFIDGDTAGGTELLIIDGAFHWQGQKPGLNGTYQPLGLPNVFSYGVLAAEAVDGESGAILVSFGVSLADDPMSDAPQTVRQTVLHMRLTEKWADAILVLDDDIDTMFQDAAPAGYKSIYPRIAAEDPVVADQYTVTNTYEGAQFLGNYYEYNRPAGQPVALGVVINYGGSKDVIVTTNFSPAPLGSSTLGTVRVSAYLGHRRYLRRVYNSTAQDSSWTALRETRPAEIHMKMTMTYEVPGAPPKTFESDWLGGPTALYKDDFPDMPFKDMATAETEHVRDETIEGIAALPSEWSFETATNAVLTVNVTIRIIPADLVFSLLVKGEPVNLVRSPSSEFSYLDVSAGKFNLRPAEGKSNTGWALGDAHGGHNFVHIMDREDTPNAGTLLLLNASPALRSLAETMPRPGGCASLFTAGNQALSEDLGSFVEAFGQTLREAYPKDATSLDPARTPAPLFDFDGAYGGYGWEIFYHIPSALAAGYVNDGQYDKAIGWLEKIFDPGAGQPWRVAPLIGASMPADHSAFDTGDVIVDPDRIATDYPFYYQQAAIRHYLEAMLADGDAAYEQQSQETLQQAKAIYVAAKQLFNERLPEILDAVTNKPWTNPTLGEVSVNGYGGFLPPYNQALRDLYDAIEARLANLRQWLDIDGNPLNVPLLSAPIDPRALQKAAKAALTLGQRDSQEEAEQDPRVDFTTLARSAKLYIGNLQTTSNRLLAALEKLDGATVGRAEKDVEEKKILRSAAIQDLTLAAAEKEVQIKQANLGGANSALAFHLGSVLVSLGALNSFAAIDAGKKSVEFVYGKAKLRYDMIRAVVFSNFPNIYGTAAGGRRAEQGAIANILGMLTSEILYDSKKSAIDKYKESSQKIIDQVKNTTDLTTKVASASLELQKAKDARDEQSKKREALDADLADLEDIRTVKANSFANLDFYKWLVDDLKSLFEEEWATTQDFCKLLVRLYEYETGETNGPSFIKTTSFGGDYQRLNAPYWLALDVERLEAAYFRSILDQQSQSATMRIAISELPAPGGDGSALTTLIEQGETYFELTDEMFDALYPGQYDRRIQSLRVRFPGLESAGLSPHARLTQIANTRYATRERDPRRGGRIRKDRYALQSIVISTPTIDTATLDYPEGSLKRFQNTGVESRWHLVLP…
SIO_010081: TMO_RS28585
subclass of: SO_0000673
so part of: TMO_RS28585
location: 14628..20768
location: region:14628-20768:1
so has part: feature:14628-20768:1:exon

WP_228382398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14628-20768:1:exon

TMO_RS28590
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28590
old locus tag: TMO_d0017
so part of: sequence
location: complement(20828..21511)
location: region:20828-21511:-1
so has part: feature:20828-21511:-1:exon
subclass of: SO_0000010

position:20828:-1
position: 20828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21511:-1
position: 21511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20828-21511:-1:exon

TMO_RS28590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28590
old locus tag: TMO_d0017
EC number: 7.4.2.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014198183.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionine ABC transporter permease
translation: MFQWLDQLFPPQLIDLLLRATGETAYMVAVATLIGTAIGLPIGVSVAVTGRGELYGAPAWNRIAGAVVNATRSIPFIILAVAIIPFTRLVAGTSIGTSAAIVPLTVAAIPFIARLVEGAIREVDRGLIEAAQAMGAKPIQIVLKVLLPEAMPGIVHGLTLAVVSLIGYSAMVGAVGGGGLGDLGIRYGYQRFMPEMMIAVVVLLIVLVQLVQSVGDRIARAVNKRHR
SIO_010081: TMO_RS28590
subclass of: SO_0000673
so part of: TMO_RS28590
location: complement(20828..21511)
location: region:20828-21511:-1
so has part: feature:20828-21511:-1:exon

WP_014748558.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20828-21511:-1:exon

TMO_RS28595
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28595
old locus tag: TMO_d0018
so part of: sequence
location: complement(21495..22556)
location: region:21495-22556:-1
so has part: feature:21495-22556:-1:exon
subclass of: SO_0000010

position:21495:-1
position: 21495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22556:-1
position: 22556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21495-22556:-1:exon

TMO_RS28595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28595
old locus tag: TMO_d0018
EC number: 7.4.2.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009540629.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionine ABC transporter ATP-binding protein
translation: MTAMVTLEAVAKTYAARGTATAVSALDGIDLRVEPGEIFGIIGRSGAGKSTLVRCINLLERPSTGRVTVDGTDMTALDDAGLIKARRRIGMVFQHFNLLSSRTVFDNVALPLELAGVGRAERRRKVEPLLELVGLADKAGRYPSELSGGQKQRVGIARALSNEPRLLLCDEITSALDPETTQQILTLIADLKRRLGLTVVAITHEMGVIREICDRVAVMEAGRVIEQGPVYDVFTAPEHPTTRSFVSSEVDLAIPSGLKRRFDEGAATGGDRNAVVRIVFKGAAAFEPAIARLATERGVAVNILHGRIEYIQGKPFGLMLVEVPGGEAAGASVVDFINGLGLDARITAHVPVA
SIO_010081: TMO_RS28595
subclass of: SO_0000673
so part of: TMO_RS28595
location: complement(21495..22556)
location: region:21495-22556:-1
so has part: feature:21495-22556:-1:exon

WP_228382399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21495-22556:-1:exon

TMO_RS28600
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
gene: queE
locus tag: TMO_RS28600
old locus tag: TMO_d0019
so part of: sequence
location: 22911..23543
location: region:22911-23543:1
so has part: feature:22911-23543:1:exon
subclass of: SO_0000010

position:22911:1
position: 22911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23543:1
position: 23543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22911-23543:1:exon

TMO_RS28600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
gene: queE
locus tag: TMO_RS28600
old locus tag: TMO_d0019
EC number: 4.3.99.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011253070.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 7-carboxy-7-deazaguanine synthase
translation: MSYTVKELFLTLQGEGAQAGRTAVFCRFAGCNLWSGRERDRAGALCRFCDTDFVGTDGDGGGRFRDAQDLAAAIEGCWGGGRARRYVVFTGGEPLLQLDEALIHAVKARGFEIAVETNGTIAAPEGIDWICVSPKAGTELVQRRGHELKLVHPQAGLDPAALEALDFGVMWVQPMDGPDRAVNTEAAVAWCLAHPRWRLSLQTHKLIGIP
SIO_010081: TMO_RS28600
subclass of: SO_0000673
so part of: TMO_RS28600
location: 22911..23543
location: region:22911-23543:1
so has part: feature:22911-23543:1:exon

WP_041608277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22911-23543:1:exon

TMO_RS28605
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28605
old locus tag: TMO_d0020
so part of: sequence
location: 23543..23929
location: region:23543-23929:1
so has part: feature:23543-23929:1:exon
subclass of: SO_0000010

position:23929:1
position: 23929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23543-23929:1:exon

TMO_RS28605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28605
old locus tag: TMO_d0020
EC number: 4.1.2.50
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011542914.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 6-carboxytetrahydropterin synthase
translation: MFELSKQFRFEAAHTLHRVIDAEPSRRIHGHSYRAEVVIRGRPDPVTGMVLDLGLFERALAGARDGLDHRLLDEVPDLGPATMENLAAWIWRRLAGQLPGLARVTVHRDSTGDICTCFGPDAGSGVAA
SIO_010081: TMO_RS28605
subclass of: SO_0000673
so part of: TMO_RS28605
location: 23543..23929
location: region:23543-23929:1
so has part: feature:23543-23929:1:exon

WP_014748561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23543-23929:1:exon

TMO_RS28610
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
gene: queC
locus tag: TMO_RS28610
old locus tag: TMO_d0021
so part of: sequence
location: 23926..24669
location: region:23926-24669:1
so has part: feature:23926-24669:1:exon
subclass of: SO_0000010

position:23926:1
position: 23926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24669:1
position: 24669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23926-24669:1:exon

TMO_RS28610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
gene: queC
locus tag: TMO_RS28610
old locus tag: TMO_d0021
EC number: 6.3.4.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012336229.1
GO process: GO:0008616 - queuosine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 7-cyano-7-deazaguanine synthase QueC
translation: MTGSPRNAGALVLFSGGQDSATCLAWALDRFDRVETLGFDYGQRHRVELDCRGTLRERMAALDPRWAARLGPDHTLDLGVLGAMSETSLTREVEIGLREDGLPDTFVPGRNLLFLTFAAALGFRRGLDHVVGGMCETDYSGYPDCRDDTIKALQVALNLGMAKQFVLHTPLMWLDKAETWALAQRLGGAALVDLIVAESHTCYLGTRGELHDWGHGCGSCPACRLRAHGHARYREALTLDGRMPAAG
SIO_010081: TMO_RS28610
subclass of: SO_0000673
so part of: TMO_RS28610
location: 23926..24669
location: region:23926-24669:1
so has part: feature:23926-24669:1:exon

WP_014748562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23926-24669:1:exon

TMO_RS28615
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28615
old locus tag: TMO_d0022
so part of: sequence
location: 24701..25204
location: region:24701-25204:1
so has part: feature:24701-25204:1:exon
subclass of: SO_0000010

position:24701:1
position: 24701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25204:1
position: 25204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24701-25204:1:exon

TMO_RS28615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28615
old locus tag: TMO_d0022
inference: COORDINATES: protein motif:HMM:NF012797.2
GO function: GO:0003723 - RNA binding [Evidence IEA]; GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrmH family RNA methyltransferase
translation: MRGFFAIGLEAVTRPMNAGTLFRAAHAFGASYAFALSDDRLGRRAAQADTSASARHLPFFRFASIDALPMPEGALLIGFEIDDALDTMPYIPHPDQAVYLIAPEVDGLSAAARSRASAVIRLPGRLALNPAMAGALVMYDRMLIHGRSAPRPVASSAVPGRHGPRRE
SIO_010081: TMO_RS28615
subclass of: SO_0000673
so part of: TMO_RS28615
location: 24701..25204
location: region:24701-25204:1
so has part: feature:24701-25204:1:exon

WP_187297903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24701-25204:1:exon

TMO_RS28620
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28620
old locus tag: TMO_d0023
so part of: sequence
location: complement(25480..26973)
location: region:25480-26973:-1
so has part: feature:25480-26973:-1:exon
subclass of: SO_0000010

position:25480:-1
position: 25480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26973:-1
position: 26973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25480-26973:-1:exon

TMO_RS28620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28620
old locus tag: TMO_d0023
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006576054.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AMP-binding protein
translation: MWTLDDVLRSAARKFAGREALVGGGRRLSFADLDAAADDAAARLQAAGITKGDAVAIHGRNTVEWVVAFFGAVRAGAVTVPVNHKLAAPETAYILQHSGATLWLVDRDLAGDGSAAGAARMLMLDDGDGGLFAGPAPAAPPAPVALDAGEPVEILYTSGTTGRPKGCLHSHANVLLAGTGSSLVYGLGPTDRVLLAMPVWHSFPLNNMLINSVYVGAAVVLLPEYHPLHFVQTMQEERCTLFFGAPIAFLMPPRMLPHFDSFDLSHVRAWIYGGGPIDAVTARMLAERYRSDRFYQVFGMTETGPTGTALYPEEQVAKAGSIGRYAVAGADLKVMRDEVTEAGPGETGEIWMRCQSMMLGYHNDPEATAAAFHDGWYRSGDLARIDDDGYLFIVDRLKDMIVTGGENVYSKEVEDVLAAHPAIAEAAVIGTPHEEWGETVTAFIVPKADTALDEAAVTAHCTAALARYKIPRIIRLVDSLPRTPTGKLQKFLLREGV
SIO_010081: TMO_RS28620
subclass of: SO_0000673
so part of: TMO_RS28620
location: complement(25480..26973)
location: region:25480-26973:-1
so has part: feature:25480-26973:-1:exon

WP_014748564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25480-26973:-1:exon

TMO_RS28625
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28625
old locus tag: TMO_d0024
so part of: sequence
location: complement(27053..27631)
location: region:27053-27631:-1
so has part: feature:27053-27631:-1:exon
subclass of: SO_0000010

position:27053:-1
position: 27053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27631:-1
position: 27631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27053-27631:-1:exon

TMO_RS28625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28625
old locus tag: TMO_d0024
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006576056.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MTAALALVASGGYAAASMPAIATRAEVSTGLLYRYFPSKADLFEEVFRRASQREIDACARRAAQPGTARERLAGVVETFARRALKGPRLAWALLAEPVDPAIEAERLRYRQPYRDIFAQLVREGIASGEIAPQDADIVAAAIVGAIAEAMAGPLTQPPEASAADPERDARLGAAIARFCVQALGPHPHSGAG
SIO_010081: TMO_RS28625
subclass of: SO_0000673
so part of: TMO_RS28625
location: complement(27053..27631)
location: region:27053-27631:-1
so has part: feature:27053-27631:-1:exon

WP_267021811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27053-27631:-1:exon

TMO_RS28630
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28630
old locus tag: TMO_d0025
so part of: sequence
location: 28015..28827
location: region:28015-28827:1
so has part: feature:28015-28827:1:exon
subclass of: SO_0000010

position:28015:1
position: 28015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28827:1
position: 28827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28015-28827:1:exon

TMO_RS28630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28630
old locus tag: TMO_d0025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006912086.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioesterase family protein
translation: MLESVDGDSVFLWRGEGEVLPTILARGPWSEMAQHGGAPAALLVHAAERALGEPGWLLSRMTLELLRPVPVAPLRLVIRGRRGRSVRRADMALIADGSEVAQGVAVLMREEAIDLGDPAVGGPGLPLPASCTEPVRIPGMPDTRSFHYTAMESRVAAGSVARPGPAAVWFRLAVPLVEGVENSPAMRVMAAADFGNGISWVLPPDRFTFVNTDLTVHLHRAPVGEWVGVDATTVMQPHGVGLTTSRLVDELGEIGIAMQGLVVRQRAAAA
SIO_010081: TMO_RS28630
subclass of: SO_0000673
so part of: TMO_RS28630
location: 28015..28827
location: region:28015-28827:1
so has part: feature:28015-28827:1:exon

WP_145978540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28015-28827:1:exon

TMO_RS28635
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28635
old locus tag: TMO_d0027
so part of: sequence
location: complement(28854..29663)
location: region:28854-29663:-1
so has part: feature:28854-29663:-1:exon
subclass of: SO_0000010

position:28854:-1
position: 28854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29663:-1
position: 29663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28854-29663:-1:exon

TMO_RS28635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28635
old locus tag: TMO_d0027
inference: COORDINATES: protein motif:HMM:NF012669.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DeoR/GlpR family DNA-binding transcription regulator
translation: MPTGENVILDSGEAVSQRQYDILRIVREQGFATIDALARQFDVSAQTIRREIIRLDALKLLQRFHGGAGVVEPAVRPPYAEKQLSQTDAKDAIGRRAAELVPDGAAVFLDVGTTVEAVARALTARGGLTIVTNSLPAAMLLAAGRPENGPRSEIFVTGGSIHGPDGSLIGDTTQAGLARFRCDVAIIGFSGIDETGALMDFDLHKVAAKQAMIRAARMVVAVGAASKFTRSAPVRIADLPEIDRLVTDRAPPRHLSEAAEQAGTRIVLA
SIO_010081: TMO_RS28635
subclass of: SO_0000673
so part of: TMO_RS28635
location: complement(28854..29663)
location: region:28854-29663:-1
so has part: feature:28854-29663:-1:exon

WP_187297904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28854-29663:-1:exon

TMO_RS28640
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28640
old locus tag: TMO_d0026
so part of: sequence
location: 29784..30428
location: region:29784-30428:1
so has part: feature:29784-30428:1:exon
subclass of: SO_0000010

position:29784:1
position: 29784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30428:1
position: 30428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29784-30428:1:exon

TMO_RS28640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28640
old locus tag: TMO_d0026
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007091552.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein
translation: MEPSLFVAEGRLWRNDDAQCRVFDPWSLIWQPADALPAGARAITAEAALAELAAANRIRRLPVAVIGPREPVGDQEAVAAAIGAAIASLGLVLLTGGKGGVMAAASRGAAESGGLVLGYVPDEDWRMANPHVAVPLATGIGPVRNALIARACPVLIAVGGGYGTLSEIAYGLHFDKLVLTIADAPVVDGAIICRDVAEIRGRIARRMLALDATL
SIO_010081: TMO_RS28640
subclass of: SO_0000673
so part of: TMO_RS28640
location: 29784..30428
location: region:29784-30428:1
so has part: feature:29784-30428:1:exon

WP_014748568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29784-30428:1:exon

TMO_RS28645
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28645
old locus tag: TMO_d0028
so part of: sequence
location: 30599..31381
location: region:30599-31381:1
so has part: feature:30599-31381:1:exon
subclass of: SO_0000010

position:30599:1
position: 30599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31381:1
position: 31381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30599-31381:1:exon

TMO_RS28645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28645
old locus tag: TMO_d0028
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014724147.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease subunit
translation: MALVTACYLLYLAAPIALLVLGSFGDSWTGTLLPSGFTTRWYEDLLADASFRRAFFTSLKVLAATAVIDALIAVPAAYAIHSAASRGVRTAARIASLMPVAVPELVLGFGFILVFSSSTLPWLGTFELLVAAHVVLTLPYLMNTLLADMQTLGLARIEAAAATLGAGFRHRFVDIVLPSLRHSLTSGLVMVAALSIGEFQLSNLVAGFLDRTYPIVLLQAFYGATGFACAATVVLLALATLAAGASALAAAGGRRARAGG
SIO_010081: TMO_RS28645
subclass of: SO_0000673
so part of: TMO_RS28645
location: 30599..31381
location: region:30599-31381:1
so has part: feature:30599-31381:1:exon

WP_014748569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30599-31381:1:exon

TMO_RS28650
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28650
old locus tag: TMO_d0029
so part of: sequence
location: 31386..32417
location: region:31386-32417:1
so has part: feature:31386-32417:1:exon
subclass of: SO_0000010

position:31386:1
position: 31386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32417:1
position: 32417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31386-32417:1:exon

TMO_RS28650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28650
old locus tag: TMO_d0029
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012976433.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MSVHFDAVSFRYPSGGAGVSDIDLEIGDGELLAVIGPSGSGKTTLLRLLSGFVVPDRGRILIDGRDVARVPVKDRALGVVFQAYALFPHMTAAENVAYPLKLRGVDRATRMARASEALEKVGLGGFAHRQPASLSGGQQQRVALARALVFGPRALLLDEPLSALDAGLRAGMRDEILRVQRAAGIATLFVTHDQEEALSMADRVAVLKDGRLLQVDTPRGLYERPVDATVAGFVGHANLWSGRVAADGLVETAIGPIRTATGGFAPGDAVTVMIRPEEVSAEPAADAANRFAGRIAADRFLGNLRRLDLEVPGGLVKVETRRRDAIDTVAIAPEAVRLLPAGL
SIO_010081: TMO_RS28650
subclass of: SO_0000673
so part of: TMO_RS28650
location: 31386..32417
location: region:31386-32417:1
so has part: feature:31386-32417:1:exon

WP_041608245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31386-32417:1:exon

TMO_RS28655
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28655
old locus tag: TMO_d0030
so part of: sequence
location: 32531..33592
location: region:32531-33592:1
so has part: feature:32531-33592:1:exon
subclass of: SO_0000010

position:32531:1
position: 32531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33592:1
position: 33592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32531-33592:1:exon

TMO_RS28655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28655
old locus tag: TMO_d0030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007091549.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: extracellular solute-binding protein
translation: MAAGTFAATTALTPAFAQPLDGGELYQGEQALYDAARDEGLVVSFDTGPTWANWAAQFKAFKARYPGVEIVYNDLGSAATVVALDKSRNRPQADTAYYFAGSALDAAEKGVVADFKPVNFDRLPEPFRHPAGQWFTIHSLNVAFLVNTKLVKQVPQSWADLLGEAYRNSVVYLDPRTAGQGQVVTIAAAFGNGGSMDDVQPGIDYLGRLHKAGNVLRTVGTTPYAQFVKGEIPIWIGYENDGLKAKYVDGMGDDVAVVIPAEASAAAPYAISLVKDGPNPNAGKLWLNYIMTDKGQTTFAEGFVRPSVPGVKLPDEVLAKLPEAPQIRPVDVAKARDAKPAIDAGWSKAVLGQ
SIO_010081: TMO_RS28655
subclass of: SO_0000673
so part of: TMO_RS28655
location: 32531..33592
location: region:32531-33592:1
so has part: feature:32531-33592:1:exon

WP_228382400.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32531-33592:1:exon

TMO_RS28660
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28660
old locus tag: TMO_d0031
so part of: sequence
location: 33705..34526
location: region:33705-34526:1
so has part: feature:33705-34526:1:exon
subclass of: SO_0000010

position:33705:1
position: 33705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34526:1
position: 34526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33705-34526:1:exon

TMO_RS28660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28660
old locus tag: TMO_d0031
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012976435.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MTLPPRLLILLSLPALVTMAVFFVLPLAVLVGETGEGGGAAYLRLVDDPVFWQGLKGTLVLGTVAPALSVVVGFCVALHLARLPEGRRQGLLFLLSLPLTFSGLIVAYGFILVFGRAGFFTLLLAELGADPAVVGAMIFTPAGLGFAYCYYLIPRVVLVMLPVLVNFDTRQMDAAESLGAGRFAAFRDVLLPQVTPALIAAFCLTAAVAIGAYGTALALVGTQVQILPLLLFSKISETGADLPAAAAASVVLMAVCCAVMGLAEALGGLRRRG
SIO_010081: TMO_RS28660
subclass of: SO_0000673
so part of: TMO_RS28660
location: 33705..34526
location: region:33705-34526:1
so has part: feature:33705-34526:1:exon

WP_014748572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33705-34526:1:exon

TMO_RS28665
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28665
old locus tag: TMO_d0032
so part of: sequence
location: complement(34626..35714)
location: region:34626-35714:-1
so has part: feature:34626-35714:-1:exon
subclass of: SO_0000010

position:34626:-1
position: 34626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35714:-1
position: 35714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34626-35714:-1:exon

TMO_RS28665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28665
old locus tag: TMO_d0032
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019402949.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRAP transporter substrate-binding protein
translation: MSDIEKKTSSADPVAGSRRQFLKTAGIGGAALAASTTFAAPAVHAQSKIRWRLQTYSGAPLGAHVIKPQIEAFNAAANGEMEIELYYADQLVPTAELFRALQNGTIDAVQSDDATMASPADVAVFGGYFPFSCRFSLDLPVLFQRYGLNEIWKEAYDEIDGVEWLSAGAWDPLHVFTKEPIRSLADMRGKRVFGVPTAGKFLSRYGLIPVTVPWDDVEVAIQTGQLDGVAWCGFTEAYEVGWADVCNYALTNNICGAWCGSYFANSKSWEKVPPHLKQLFLTTIDQSHYYRQVWYWGGEADLRVNGKKMELTSIPREEWSQVEKDAEQFWDEIAATSPRAGKVVKILKDYSALMEKAGFPYR
SIO_010081: TMO_RS28665
subclass of: SO_0000673
so part of: TMO_RS28665
location: complement(34626..35714)
location: region:34626-35714:-1
so has part: feature:34626-35714:-1:exon

WP_041608248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34626-35714:-1:exon

TMO_RS28670
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28670
old locus tag: TMO_d0033
so part of: sequence
location: complement(35791..37113)
location: region:35791-37113:-1
so has part: feature:35791-37113:-1:exon
subclass of: SO_0000010

position:35791:-1
position: 35791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37113:-1
position: 37113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35791-37113:-1:exon

TMO_RS28670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28670
old locus tag: TMO_d0033
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020085421.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRAP transporter large permease subunit
translation: MSYELIAILMFATMALMLLTGQRVFGAIGFVAAGAALLLYGNGAVEMPFNATLKLFNWFPMLTLPLFIYMGYILSEAGIAEDLYKAFHVWFGRLRGGLAIGTIVLMVVISAMNGLSVAGLAIGATIALPEMLRRGYDKVLITGVIQGGSSLGILIPPSVVLVLYGMIARAPVGQLWLAGMVPGLMMAAMFTAYVVVRCRLNPALAPTVTDDELNMPIGQKLKLLRAGLIPFVIFFTMMGLFVMGYTSLVESSAIGATGATIAAALKGRLNWRLIKETSKKTLSISCMFMWLILAALAFGAVFDGIGAARAIESLFITNWELTRWQVMAMMMASFILMGMFLDDTAMLVIVAPLYVPLVKALEFNVIWFGVLYTITCQIAYITPPFGYNLFLMRAMAPKEITLIDIYKSIIPFVIMMVITIALLMVFPGIALWLPNLVYGK
SIO_010081: TMO_RS28670
subclass of: SO_0000673
so part of: TMO_RS28670
location: complement(35791..37113)
location: region:35791-37113:-1
so has part: feature:35791-37113:-1:exon

WP_014748574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35791-37113:-1:exon

TMO_RS28675
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28675
old locus tag: TMO_d0034
so part of: sequence
location: complement(37110..37622)
location: region:37110-37622:-1
so has part: feature:37110-37622:-1:exon
subclass of: SO_0000010

position:37110:-1
position: 37110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37622:-1
position: 37622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37110-37622:-1:exon

TMO_RS28675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28675
old locus tag: TMO_d0034
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020085420.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRAP transporter small permease subunit
translation: MPAAIRWYVRVVDRLSDYVGIVAMALVFVMIGVLLLDAITRNALDIPLHWCVEVAQFTLLAYFFMGGAMTLKNDDHVRMDLIYQHLSTRGKAILDLITSACLMFYLVVMTIGSVSSLQYAIQTNERRFSMWNPSMIPIKALLVVCLVIMLLQTLSLVFKHIATIRRVDAV
SIO_010081: TMO_RS28675
subclass of: SO_0000673
so part of: TMO_RS28675
location: complement(37110..37622)
location: region:37110-37622:-1
so has part: feature:37110-37622:-1:exon

WP_041608250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37110-37622:-1:exon

TMO_RS28680
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28680
old locus tag: TMO_d0035
so part of: sequence
location: complement(37690..38445)
location: region:37690-38445:-1
so has part: feature:37690-38445:-1:exon
subclass of: SO_0000010

position:37690:-1
position: 37690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38445:-1
position: 38445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37690-38445:-1:exon

TMO_RS28680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28680
old locus tag: TMO_d0035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014869664.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DeoR/GlpR family DNA-binding transcription regulator
translation: MRRRERQARIADMIWQQGEMSVDALAQAFEVSAETIRRDLAGLASDGVLQKVHGGARRPKLHAEGSFKDRMAEEAEAKQVIAGRLVPLIEPGDTLFIDTGSTTLACAEALAGIGGLTVITNSLRIARVFGAAPQPGRVYLLGGTFMGDNDQTVGPLVIEQIRDFQADHAILTVAAIDAEVGAMDSNFDEAQVARAMIGNARSLILVAARAKFGRKAAFRVCGLDEVDTVVTDAPPGAIHEAALRAAGAELI
SIO_010081: TMO_RS28680
subclass of: SO_0000673
so part of: TMO_RS28680
location: complement(37690..38445)
location: region:37690-38445:-1
so has part: feature:37690-38445:-1:exon

WP_014748576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37690-38445:-1:exon

TMO_RS28685
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28685
old locus tag: TMO_d0036
so part of: sequence
location: 38634..40082
location: region:38634-40082:1
so has part: feature:38634-40082:1:exon
subclass of: SO_0000010

position:38634:1
position: 38634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40082:1
position: 40082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38634-40082:1:exon

TMO_RS28685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28685
old locus tag: TMO_d0036
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020188024.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MAPAGDAFPNGHADGTFDVAIIGAGVIGCALARRFTLEGARVVLIEKAADVLDGASKGNSAILHTGFDAPPGSVEAACIAAGYREYLEIRARLNLPLLQTGALVVAWTDEEAATLPDLIAQARANGVDDVEPLTEAEARRLEPALGPGVRAAFRVPREYVIDPWSAPHAYLRQAVENGARLMTAAPVTAGVFDGSTWRLETPRGAVRAGLVINAAGLWGDRLDDLLTGTTDFTIRPRKGQFVVYDKPAAALAGHILLPVPNKVTKGIVVCRTAFGNLLVGPTAEEQEDRERAGLVPETLEALIRRGTEILPALKDHEVTAIYAGLRPATEFKDYRIRVEAARRYVTVGGIRSTGLSSALGTAAHVHRLVAGLLAGHQAIADPVWPRMPMLAEHETRDWQCPGNGGVVCHCERVTRREIEAALDGPTGARSLAGLKRRTRVTMGRCQGFYCSEALAAITAGRLAVPMTADPTTAPPAAAGDEA
SIO_010081: TMO_RS28685
subclass of: SO_0000673
so part of: TMO_RS28685
location: 38634..40082
location: region:38634-40082:1
so has part: feature:38634-40082:1:exon

WP_014748577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38634-40082:1:exon

TMO_RS28690
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28690
old locus tag: TMO_d0037
so part of: sequence
location: 40079..41329
location: region:40079-41329:1
so has part: feature:40079-41329:1:exon
subclass of: SO_0000010

position:40079:1
position: 40079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41329:1
position: 41329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40079-41329:1:exon

TMO_RS28690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28690
old locus tag: TMO_d0037
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020085417.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MTAEHWDVVVIGAGPAGLAAATELRRQGVDRVLVLDREAEAGGIPRHCAHSPFGLREFRRLMTGPAYARRLMRTAAAAGVEIRTRVTVAAIRPGSGASGPELDVSTPDAGLGVIRARRVLVATGVRETSRAQRLIGGTKPGGVLSTGALQGLVHLDHLKPFSRPVVLGTELVSFSALITCVQAGIRPVAMIEPGQGTVARWPAGLLPRLLGVKLLTGTALRTIEGRDRVTAVTLRDADGAERVIETDGVVVTGGFRPEATLFAGSHLARDPATGGPVIDEFGRCSDPAVFAAGNLLRPVETAGWSWKEGRRTGRAIALDLAGRLPAAGGLAVVVAGAPLRFALPQLIAGGRPGLRVHDHIQFRVDSRVAGRLVLTDDGREIWSQRLRSRPERRILVPIDALPVVRSGRYTFGWDAR
SIO_010081: TMO_RS28690
subclass of: SO_0000673
so part of: TMO_RS28690
location: 40079..41329
location: region:40079-41329:1
so has part: feature:40079-41329:1:exon

WP_041608252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40079-41329:1:exon

TMO_RS28695
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28695
old locus tag: TMO_d0038
so part of: sequence
location: 41329..42756
location: region:41329-42756:1
so has part: feature:41329-42756:1:exon
subclass of: SO_0000010

position:42756:1
position: 42756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41329-42756:1:exon

TMO_RS28695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28695
old locus tag: TMO_d0038
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020085416.1
GO function: GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FGGY family carbohydrate kinase
translation: MTILAIDQGTTTTRAVLVGPDGGTRIVASLPHRQIHPAPGHVEHDPEELIRNLRSCLDAARAAGAPLAVGIDNQGESCLAWDAATGEAISPVLVWQDDRTRDVVDRLRADGAEDMVLSRAGLPLDPYFSASKLAWILREIPAARRLAGLGRLRLGTTDAFFRDRLTGRFETDVTTASRTALMNLDSCDWDPELCRLFGVPIEALPPIGPSTGDFGTLAGTGLRLTASLVDQQASLYGHGCRQAGDGKITFGTGGFALVVTDRRMAAGRDGPLPTIAWQKAGEAPVHALEGGVYCAASAVNWAQGLGLFAGHDDIGAFDGAPATLDGPVFVPALAGLACPHWDRRARGAWLGLGLDTGPGRMMQALLEGIALRMAEVVAVIGRHQPLTDPVPIDGGMAANAYFCRMLADCLERPVIVSDEPELTAVGTAALAAEVAGVAVATPRRGRRIDPRPLPSGLRARFDAARAAVQAFAAAG
SIO_010081: TMO_RS28695
subclass of: SO_0000673
so part of: TMO_RS28695
location: 41329..42756
location: region:41329-42756:1
so has part: feature:41329-42756:1:exon

WP_041608254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41329-42756:1:exon

TMO_RS28700
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28700
old locus tag: TMO_d0039
so part of: sequence
location: complement(42732..43607)
location: region:42732-43607:-1
so has part: feature:42732-43607:-1:exon
subclass of: SO_0000010

position:42732:-1
position: 42732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43607:-1
position: 43607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42732-43607:-1:exon

TMO_RS28700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28700
old locus tag: TMO_d0039
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010930232.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MTGFLRAAGHFGPTAAFVCLWSSGAIFIRLGLDHASPLAFLSLRFALALLAITMILRLQGQRWPRLQAWPRLLATGLLLVGAYAVCYMAAMDQGMTPGAVATIMGLQPVLTLVMTGGARSRRRVAGLVLALAGLVTVVWQSLAAASLTPAGAGLALAALAAMTAGALLQKRSTIDPLTAMPVQYLAALALCLIVLPTEAVRFDAVPAVVLPLLWLALVISVGAQLLFYRLIRAGDLVNVTSLFYLVPAGTVLLDFAVFGTVPAPLALCGMAAILGGIGLVFGRGQPAAAKA
SIO_010081: TMO_RS28700
subclass of: SO_0000673
so part of: TMO_RS28700
location: complement(42732..43607)
location: region:42732-43607:-1
so has part: feature:42732-43607:-1:exon

WP_014748580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42732-43607:-1:exon

TMO_RS28705
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28705
old locus tag: TMO_d0041
so part of: sequence
location: complement(43918..44778)
location: region:43918-44778:-1
so has part: feature:43918-44778:-1:exon
subclass of: SO_0000010

position:43918:-1
position: 43918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44778:-1
position: 44778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43918-44778:-1:exon

TMO_RS28705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28705
old locus tag: TMO_d0041
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014242427.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CoA ester lyase
translation: MSPARIQSRRSFIFTPGTRPDMFPKALASGTDIVCVDLEDAVAPKDKPEARDRAFAYVPVTEGDPRVERIIRINCLRTPEGMADVKALIEAERPAPAVMLPKVKGPEEVRNLADLLDEYQRPTRLHVIIETNEGLEAAVEIATSSERIEALFFGGVDMAADLRCRNVWNALLYARSRVVHAAATAGVDVIDVPWLDLEDEAGMIREAEAAADLGFSGKGTIHPKQIPHINRVFTPDDATVAHARKVLDAFAAADSGLLVVDGKLIEKPVLRSMTRIVNTWEAAQRG
SIO_010081: TMO_RS28705
subclass of: SO_0000673
so part of: TMO_RS28705
location: complement(43918..44778)
location: region:43918-44778:-1
so has part: feature:43918-44778:-1:exon

WP_041608256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43918-44778:-1:exon

TMO_RS28710
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28710
old locus tag: TMO_d0042
so part of: sequence
location: complement(44883..45512)
location: region:44883-45512:-1
so has part: feature:44883-45512:-1:exon
subclass of: SO_0000010

position:44883:-1
position: 44883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45512:-1
position: 45512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44883-45512:-1:exon

TMO_RS28710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28710
old locus tag: TMO_d0042
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020042058.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupin domain-containing protein
translation: MTPPESPPASIPEMPVVEPLTEEDDLSLGLAVRRARQARGLSLKQVADAANVSVGFLSQIERGISSPSVRALRAICAILDVPVLELLGGGESDPNNEARRIVRAGQRRRVDFGDKGMVKEFLTVHDQGMLQVMELTLDPDGGSGEDAYNHEGEECGVVLEGRLELYVDGAVYRLGEGDAFHFESASPHKFRNLANGRTRILWITTPPVW
SIO_010081: TMO_RS28710
subclass of: SO_0000673
so part of: TMO_RS28710
location: complement(44883..45512)
location: region:44883-45512:-1
so has part: feature:44883-45512:-1:exon

WP_228382396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44883-45512:-1:exon

TMO_RS31470
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS31470
so part of: sequence
location: complement(45659..45871)
location: region:45659-45871:-1
so has part: feature:45659-45871:-1:exon
subclass of: SO_0000010

position:45659:-1
position: 45659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45871:-1
position: 45871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45659-45871:-1:exon

TMO_RS31470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS31470
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLPLFVVLPTIAGQRGAGLPPATTHTTGSPVLVAQTPALRCGSASALTDFHRSEIIEGRNEIGQPISFS
SIO_010081: TMO_RS31470
subclass of: SO_0000673
so part of: TMO_RS31470
location: complement(45659..45871)
location: region:45659-45871:-1
so has part: feature:45659-45871:-1:exon

WP_145978541.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45659-45871:-1:exon

TMO_RS28715
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28715
old locus tag: TMO_d0043
so part of: sequence
location: 45870..46616
location: region:45870-46616:1
so has part: feature:45870-46616:1:exon
subclass of: SO_0000010

position:45870:1
position: 45870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46616:1
position: 46616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45870-46616:1:exon

TMO_RS28715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28715
old locus tag: TMO_d0043
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007600582.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MRLKTLAAAITALAIGAVAPAFAAETVKVGVTTTGVPFTFVDTSSQKPTGAMVDLAQAIGAEAGLATEFEVVAFSALIPSLTTGKIDLISAGMLATDKRREVVDFSAPVYTYGEAMFVPADEPANYTLDDLKGATIGAQVGTTFADALNARGTFGEVKLYDSIADIMRDVKLGRIKAGFGDKPIVAYQIAQNPGIGLRLVDGYQPLKAGDVALAVSKENPGLLEKVNAAIAKLKESGELAKIFAKYGL
SIO_010081: TMO_RS28715
subclass of: SO_0000673
so part of: TMO_RS28715
location: 45870..46616
location: region:45870-46616:1
so has part: feature:45870-46616:1:exon

WP_014748584.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45870-46616:1:exon

TMO_RS28720
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28720
old locus tag: TMO_d0044
so part of: sequence
location: 46744..47400
location: region:46744-47400:1
so has part: feature:46744-47400:1:exon
subclass of: SO_0000010

position:46744:1
position: 46744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47400:1
position: 47400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46744-47400:1:exon

TMO_RS28720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28720
old locus tag: TMO_d0044
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011482386.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter permease
translation: MSDFLSRSADYMPLLFEGMWRTVAVTLLALCLATLLGLVWALLRTSGVRVLAVPTRILVEFVRGIPILVILFYIYFVMPEIGLDLTAFQAGVIGLALTYSCYIGETFRAGIEAVDKGQIEAAKSIGMRRPLMMRRVVLPQAFRIVVPPYANNLVMLLKDSSQVSVISVAELTMQGKMLASSTFDNMTVFTLVALLYLCLTIPLNMVMRRVELRMGKAR
SIO_010081: TMO_RS28720
subclass of: SO_0000673
so part of: TMO_RS28720
location: 46744..47400
location: region:46744-47400:1
so has part: feature:46744-47400:1:exon

WP_041608259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46744-47400:1:exon

TMO_RS28725
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28725
old locus tag: TMO_d0045
so part of: sequence
location: 47397..48128
location: region:47397-48128:1
so has part: feature:47397-48128:1:exon
subclass of: SO_0000010

position:47397:1
position: 47397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48128:1
position: 48128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47397-48128:1:exon

TMO_RS28725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28725
old locus tag: TMO_d0045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015667933.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter ATP-binding protein
translation: MIRFEDVHKSYGSHEVLKGIDAEVAKGQVVCLIGPSGSGKSTLLRCVNGLETYQRGRITIDGALVDAEGPAIHGLRTRVSMVFQRFNLFPHRTALENVMEGPIHVLREPASEVRARAEALLARVGLADKFHAYPGALSGGQQQRVAIARSLAMRPDAILFDEPTSALDPEMVGEVLQVMRSLADEDMTMLVVTHEIQFAREVADAVLFLDGGRIVEQGPAAEVLRNPRHERTQDFLRRVTHPV
SIO_010081: TMO_RS28725
subclass of: SO_0000673
so part of: TMO_RS28725
location: 47397..48128
location: region:47397-48128:1
so has part: feature:47397-48128:1:exon

WP_014748586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47397-48128:1:exon

TMO_RS28730
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28730
old locus tag: TMO_d0046
so part of: sequence
location: 48387..49658
location: region:48387-49658:1
so has part: feature:48387-49658:1:exon
subclass of: SO_0000010

position:48387:1
position: 48387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49658:1
position: 49658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48387-49658:1:exon

TMO_RS28730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28730
old locus tag: TMO_d0046
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008890388.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MPSFSPAASVWAATAASGPDLPAITGERRADVAIVGAGFTGLVAALTLARGGASVIVVDTVEPGFGASGRNGGQVIPGLKDDPDTLDRVFGEATTAFAGGTADLVFSLIDELGIDCDPVRGGWIQASVKHLHLPRLESRMAQWRARGAAVEMLDPAGMAAATGGRGFVGGWIDRRGGSVHPLAYARGLARAALQAGAEIFRDAEAVSIKRGNGGWVLGFASGARLTADQVVIATNGYTGRLWPGLKATVIPANSIQVATAPLPDDLRARILPGRPVVSDSRRIANYFRIGPEGRLMMGGRGAFREPRDAADYRRIEAALASFYPEAARLPMGFRWAGRVAMTRDHLPHIHQPSAGVTMALGYNGRGVALASAMGRAIGAHLLDGANPLPLALSAIKPMPVHGLHPLYATAMIEAYRVRDMLER
SIO_010081: TMO_RS28730
subclass of: SO_0000673
so part of: TMO_RS28730
location: 48387..49658
location: region:48387-49658:1
so has part: feature:48387-49658:1:exon

WP_041608260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48387-49658:1:exon

TMO_RS28735
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28735
old locus tag: TMO_d0047
so part of: sequence
location: complement(49659..50018)
location: region:49659-50018:-1
so has part: feature:49659-50018:-1:exon
subclass of: SO_0000010

position:49659:-1
position: 49659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50018:-1
position: 50018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49659-50018:-1:exon

TMO_RS28735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28735
old locus tag: TMO_d0047
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018428316.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VOC family protein
translation: MTDAAICIPVLASLDIAESQVFYQDQLGFAAERHGDYLLVRRNRMEIHFWLTDDRRYPENTSCYIRGGEILDLHAEFSARGVPGLSAIEDKPWGMTEFHIHDPHGNLLRFGGSTRELRG
SIO_010081: TMO_RS28735
subclass of: SO_0000673
so part of: TMO_RS28735
location: complement(49659..50018)
location: region:49659-50018:-1
so has part: feature:49659-50018:-1:exon

WP_014748588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49659-50018:-1:exon

TMO_RS28740
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28740
old locus tag: TMO_d0048
so part of: sequence
location: complement(50063..50845)
location: region:50063-50845:-1
so has part: feature:50063-50845:-1:exon
subclass of: SO_0000010

position:50063:-1
position: 50063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50845:-1
position: 50845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50063-50845:-1:exon

TMO_RS28740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28740
old locus tag: TMO_d0048
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010658675.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MAAGTSGFTLDGVGLTAGGRPILADITLDLACEGLTALIGHNGSGKSTLLDILSGQTAPTTGRVRFAGRPLDRWPARDLARHLALLPQATPAAPGLLVHELVALGRFPWHGALGRFSAADRRAVDEAIALTGIGGFADRQVDTLSGGERQRVWVAMMIAQDASCWLLDEPTSALDIAHQAEVLGLIRDLARTRGFAAVLVLHDINMAADHADRIVALHSGRVIADDIPARIMTPAQLRAIYGIEMEVTRSAAGRIRAFAA
SIO_010081: TMO_RS28740
subclass of: SO_0000673
so part of: TMO_RS28740
location: complement(50063..50845)
location: region:50063-50845:-1
so has part: feature:50063-50845:-1:exon

WP_014748589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50063-50845:-1:exon

TMO_RS28745
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28745
old locus tag: TMO_d0049
so part of: sequence
location: complement(50845..52485)
location: region:50845-52485:-1
so has part: feature:50845-52485:-1:exon
subclass of: SO_0000010

position:52485:-1
position: 52485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50845-52485:-1:exon

TMO_RS28745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28745
old locus tag: TMO_d0049
inference: COORDINATES: protein motif:HMM:TIGR01194.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:1904680 - peptide transmembrane transporter activity [Evidence IEA]
GO process: GO:0015833 - peptide transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cyclic peptide export ABC transporter
translation: MTSGSLFASLVTSHWRRLTLAILAGGLSAAGTILLLHRVNDAIARDFVLPAGFVTGFLALAAVTFAARAASDLATNAAGQAVVADLRARLARRIIDAPVPALEGWGRNRILPVLNHDVDMISDVAFVAAPLAISAITVIGAFAYLIWLSPALSAAVILVLAAGGWLQYRARRRAVRGFDEAREGEDRLHAAYATITGGAKELKIYKPRREKIHGDILTTIADIRRINGRAIAIFVIANALGSALVFAVIGVLLAWAAFSPEDPAVYSGFLILLLFLRGPVEQIMTSMPAITRMQIALRRIDELSGRFATAEPGATASAAMPAEPVEIRLDGLAFAFPSTEDGPGFRLGPLDLGFAPGRITMIVGDNGSGKTTLIKLLLGLYRPDAGRIVVGGRPVEDDTRDAYRQMFSAILTDYHLFDEVMPGARVSDEELGTHLDRLRLGTKVEVANGRFSTTELSTGQRKRLALIHAWVDRRPVVVFDEWTADQDPGFRHVFHTELLPALKAEGRTLIVISHDDRYFDTADRIIRMKDGRVTEMVDLTTPRRDG
SIO_010081: TMO_RS28745
subclass of: SO_0000673
so part of: TMO_RS28745
location: complement(50845..52485)
location: region:50845-52485:-1
so has part: feature:50845-52485:-1:exon

WP_014748590.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50845-52485:-1:exon

TMO_RS28750
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28750
old locus tag: TMO_d0050
so part of: sequence
location: complement(52482..53240)
location: region:52482-53240:-1
so has part: feature:52482-53240:-1:exon
subclass of: SO_0000010

position:52482:-1
position: 52482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53240:-1
position: 53240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52482-53240:-1:exon

TMO_RS28750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28750
old locus tag: TMO_d0050
inference: COORDINATES: protein motif:HMM:NF016818.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: siderophore-interacting protein
translation: MTDTPDDGYRLLRVTAITDPGPHLRRLRLEGPDLARFATDDDLHVRLWLPAEAGAPPPRPKLGPDGRPLGGARGMAGAMRYYTIRRIDAAAGWLEVDFVLHDAAGPGADFARRAVPGATCGMSGPCGRGVPPARRLLLAGDETALPAIARIAEGLAPDATGFALIEVEGPEDILPFDHPPGLAVSWIVRRDGGRHPLAAALGPLLPGFDRADDFVWIAGEFDQLQTLKPLLATLPRARQLCVPYWRRSETRS
SIO_010081: TMO_RS28750
subclass of: SO_0000673
so part of: TMO_RS28750
location: complement(52482..53240)
location: region:52482-53240:-1
so has part: feature:52482-53240:-1:exon

WP_014748591.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52482-53240:-1:exon

TMO_RS28755
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
gene: fhuB
locus tag: TMO_RS28755
old locus tag: TMO_d0051
so part of: sequence
location: complement(53237..55216)
location: region:53237-55216:-1
so has part: feature:53237-55216:-1:exon
subclass of: SO_0000010

position:53237:-1
position: 53237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55216:-1
position: 55216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53237-55216:-1:exon

TMO_RS28755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
gene: fhuB
locus tag: TMO_RS28755
old locus tag: TMO_d0051
inference: COORDINATES: protein motif:HMM:NF007866.0
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fe(3+)-hydroxamate ABC transporter permease FhuB
translation: MTAPFRRPPILLPLAIAGFAVAALLLVRTNLAALVPPALWPDALLAPAPADTMQVLAHYAFLPRVSVALLSGGGLALAGAMLQYVLRNPLAEPATLGISAGAQLALTLATLQAPWAFAIGREGVALLGAALAFCLVLVLSAARGLSPVSVTLAGLIVSLFCGMAAAVVTLFNHDLLIGLFLWGAGYLDQGDWQTTRSLVGQVLPLALLTLLLIRPITLLGLDDRAARGLGLNVAWFRLAAMGAAVALTAVIVAAVGIISFIGLAAPAIARLAGARRPVAQLVAAPVIGALLLLITDQLVLLLPTTYRAFPTGAMTAILGAPLLLILLPRLAAAEPPALRRHAPVHRAARPWRLVALIAGLTLIIFAGALLTTGDATGPVAGHWDEILAYRLPRALAAFAGGLSLAIAGTILQRMTGNPLAAPEVLGISSGAMLGIIAVMFLAASPTRPLQIAGGAAGAVLMLALILALTRRQAFSGLRLLLAGIAMGSITGLVVAVLKTFQDPRLGQLLAWLSGSTYATSMPEALLALGLGLAALALTPLMLRWLHLLPLGGRFARTLGMSVARVNAGLLLLVALLSASATILVGPLAFVGIMGPHFARLAGLVRPAEQLVGAALFGGLTLLAADWAGRVVIFPYQIPAGLLAALIGGPVLLLLIGRRA
SIO_010081: TMO_RS28755
subclass of: SO_0000673
so part of: TMO_RS28755
location: complement(53237..55216)
location: region:53237-55216:-1
so has part: feature:53237-55216:-1:exon

WP_014748592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53237-55216:-1:exon

TMO_RS28760
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28760
old locus tag: TMO_d0052
so part of: sequence
location: complement(55213..56103)
location: region:55213-56103:-1
so has part: feature:55213-56103:-1:exon
subclass of: SO_0000010

position:55213:-1
position: 55213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56103:-1
position: 56103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55213-56103:-1:exon

TMO_RS28760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28760
old locus tag: TMO_d0052
inference: COORDINATES: protein motif:HMM:NF013648.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MSPRMPSRRTVLGGLVSTALAAPVPAFAGAGAPRIVALDWVSAASLAALGVMPVAAPELPRYAQIVVEPALAPGVQELGLRAEPNLERIARLRPDAILTDGELAPLEARLNRIAPVHRFQPHAFDGRDQIATGMAALDGLGRTVGLERQVNDYLARAQAAFDGAARLPAIDRRPAYVISLIDGRRCLVFTADGLFQAVLDRLGIANAWTGTGSAFGHLTVTLDQLAARPEARLINIGHVPLVRAALAMRQPVLSSLPAIRAGRVTLLPEVLFYGGIPAALRFLHLLTDALQAEHAA
SIO_010081: TMO_RS28760
subclass of: SO_0000673
so part of: TMO_RS28760
location: complement(55213..56103)
location: region:55213-56103:-1
so has part: feature:55213-56103:-1:exon

WP_014748593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55213-56103:-1:exon

TMO_RS28765
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28765
old locus tag: TMO_d0053
so part of: sequence
location: complement(56106..58628)
location: region:56106-58628:-1
so has part: feature:56106-58628:-1:exon
subclass of: SO_0000010

position:56106:-1
position: 56106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58628:-1
position: 58628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56106-58628:-1:exon

TMO_RS28765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28765
old locus tag: TMO_d0053
inference: COORDINATES: protein motif:HMM:TIGR01783.1
GO component: GO:0019867 - outer membrane [Evidence IEA]
GO function: GO:0015343 - siderophore-iron transmembrane transporter activity [Evidence IEA]
GO process: GO:0015891 - siderophore transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB-dependent siderophore receptor
translation: MAFRMAASRRRGVAGLTRLLLTTSMLGCAVLVPAGAGAQQTAPATAAETRAFSIPAQPLAAAIDAFIGASGWQISYSSALVAGKNSTAVSGRMTAEEALRRLVSGSGISVRISAPGSAALFAEAGAAAGETVLDPLMVEAGRRGGRNDPATATTGYVARNGSVATKTDTPVIEVPQSLSIVTRQEMDDRGVTDLNDAIAYAPGIRAIDYPGGQGMPLMYLRGFRAQSQRDFYRDGLRNGYNPYDSFVEPYGLESVAVLRGPSSVLYGDAAPGGLVSMTTKRPTEDPFGEIRLEYGSFDRKQVAIDLGGPLDEDRHILYRLTALKRDADTQIDHSKDDSVYIAPALTLDSREGTRLTLLAQYQNWTQGGSEQSLPLDNSVYSNGIKIPSDFYMGIPGLTDWNVESSTIGYVFEQEIDDTWTFRNNLRYTHAELDYVSAFNWEWPIAVVDGHYVNVGVQNRPRTSDTLVADANVNGVVETGPLAHDLTFGVNYGYSRIRETRTNSTNNAHIDILNPNYDFDPVYGLPWSDDKSLISQIGVYAQDQIRWDKWIVTLSGRQDWADISEYDYYSNTLYAAYGYDDTVTKRRQNAFSGRVGLGYLFDNGFAPYLSYSTSFEPVSGSYSDGRPFDPTTGEQYEAGLRYQPPGTGLMFSASVFQLTQQNVVTPDAQRPTLSTQEGEVRSRGLELEAKGDLGDGWSLVASYAYTDSEVTKDNPNASGISKVGTRTQAVPYHTAGLWVNHDFQTATLAGLRIGAGLRYVGSSLTAMDTGTGTQANIDGYTLFDASASYDLSQVHPGLAGLSLGVSGTNLTDEEYYTPGFYSNSVLAGKRRTIKGNLTYRW
SIO_010081: TMO_RS28765
subclass of: SO_0000673
so part of: TMO_RS28765
location: complement(56106..58628)
location: region:56106-58628:-1
so has part: feature:56106-58628:-1:exon

WP_014748594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56106-58628:-1:exon

TMO_RS28770
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28770
old locus tag: TMO_d0054
so part of: sequence
location: complement(58737..59723)
location: region:58737-59723:-1
so has part: feature:58737-59723:-1:exon
subclass of: SO_0000010

position:58737:-1
position: 58737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59723:-1
position: 59723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58737-59723:-1:exon

TMO_RS28770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28770
old locus tag: TMO_d0054
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015917942.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FecR domain-containing protein
translation: MRRDPPSPDTTGPEPHDDPAADQALDWFLTLRDGTADAATRAEFARWQARDPRHAAEFRRVTAAWGAESFATAVQELPAAATAAAPRRRPILRRMAGLAMAAGFAALALWQGPALMIRLEADHRTATGERATITLPDGSTMMLDTASAVTVDFDGGRRLVTLLKGEAWFDVRHDPDHPFRVTGRFTTVTVLGTAFAVEARDDRDEIILERGRVEVARRDGLGTPVVMAPDQRVVASAAGIDPVRPVDTRRALAWREGRLVFHDRPLSEVVDSLARYHPGYVILADRAAANLAVSGSYRLDDVTAGFAGLADAAGLSLRALPGGIIILE
SIO_010081: TMO_RS28770
subclass of: SO_0000673
so part of: TMO_RS28770
location: complement(58737..59723)
location: region:58737-59723:-1
so has part: feature:58737-59723:-1:exon

WP_014748595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58737-59723:-1:exon

TMO_RS28775
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28775
old locus tag: TMO_d0055
so part of: sequence
location: complement(59815..60330)
location: region:59815-60330:-1
so has part: feature:59815-60330:-1:exon
subclass of: SO_0000010

position:59815:-1
position: 59815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60330:-1
position: 60330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59815-60330:-1:exon

TMO_RS28775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28775
old locus tag: TMO_d0055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007702319.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor
translation: MTTTLTEIFLHSRQTLIRRVRRIVWDPQVAEDLAQETYIRAAHADRSGTIEQMEAYLHRTARNLALDHLRRRQTRAAVERPETPDHDIRDIAADQPAADDRLAAREELDHVRAALSRLPERTQKVVVLARIEGWSNARIARHLDISERTVFNDLKLALGHCRDALARLERK
SIO_010081: TMO_RS28775
subclass of: SO_0000673
so part of: TMO_RS28775
location: complement(59815..60330)
location: region:59815-60330:-1
so has part: feature:59815-60330:-1:exon

WP_014748596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59815-60330:-1:exon

TMO_RS28780
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28780
old locus tag: TMO_d0056
so part of: sequence
location: complement(60522..60860)
location: region:60522-60860:-1
so has part: feature:60522-60860:-1:exon
subclass of: SO_0000010

position:60522:-1
position: 60522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60860:-1
position: 60860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60522-60860:-1:exon

TMO_RS28780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28780
old locus tag: TMO_d0056
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008943733.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF962 domain-containing protein
translation: MPPTDRPQRYAEFWPYYLREHADPRCRALHYAGSTAALLCLLALVVTGSWWWLAGALVSGYGFAWIGHFFIEKNRPATFSYPLWSLVSDWRMYGLWLAGRLRPELRGAGITV
SIO_010081: TMO_RS28780
subclass of: SO_0000673
so part of: TMO_RS28780
location: complement(60522..60860)
location: region:60522-60860:-1
so has part: feature:60522-60860:-1:exon

WP_014748597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60522-60860:-1:exon

TMO_RS30130
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS30130
old locus tag: TMO_d0057
so part of: sequence
location: 61234..62583
location: region:61234-62583:1
so has part: feature:61234-62583:1:exon
subclass of: SO_0000010

position:61234:1
position: 61234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62583:1
position: 62583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61234-62583:1:exon

TMO_RS30130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS30130
old locus tag: TMO_d0057
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: thioesterase family protein
translation: MQMNDQADEEMIAGADIGFEAIEGGRGVVMAAETDARGRMSAAAIADRFADGVVVALSAAGFGRHAMAEQGLSLKVLASAVEVERAPAIGEAWRVGLTPVPVEEGIGFAAELSDPLMGDVFARGIVEVVPEDASGVHAAFPDDIADRLAEAAIESAGPADALPAGAGVVGNRHCDIMGHMNVQFYGAAFDQACRLLGVGLGLAEGVVLKPVRSVIRFKAEQRLGDAFQVTSRPTMVAPDAIAVTHELHNLETGTLSASVDYVLQPILAEDASLRPFDDATIETASMLGAEIVGGIDIGPGPSEGQGISFETYRGSVDPWHCDEHGLVGEQSLIDRVSCAAGQLLDKVGLSGERIRRDRIGTAAVEYRIRYEGPARNGDALTLRSQIAGVRDKVLVLRHRLSRPGEEATPLLEIDVIAVMLDLERRRATRVPDDVAAQARELLIEDDAAV
SIO_010081: TMO_RS30130
subclass of: SO_0000673
so part of: TMO_RS30130
location: 61234..62583
location: region:61234-62583:1
so has part: feature:61234-62583:1:exon

WP_014748598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61234-62583:1:exon

TMO_RS28790
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28790
old locus tag: TMO_d0058
so part of: sequence
location: complement(62650..63840)
location: region:62650-63840:-1
so has part: feature:62650-63840:-1:exon
subclass of: SO_0000010

position:62650:-1
position: 62650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63840:-1
position: 63840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62650-63840:-1:exon

TMO_RS28790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28790
old locus tag: TMO_d0058
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018390057.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Mrp/NBP35 family ATP-binding protein
translation: MSRTVRDQILSRLAGIRDPERGRDVVASGRISGLTVDEAGIARIMVETTPDRAAATEPLRREIEQAAAGVAGVTRAAAVLTAERTPGRGPGQAPRGGAGHGHSHGHSHAPAGSAAAGSPTGPAAGQRPSAPVVPGVTAIIAVASGKGGVGKSTLAVNLALALQARGLKTGILDADVYGPSIPRMLGLQGRPDSPDGKRITPKIGWGLKAMSIGLMVEEDTPLIWRGPMVQGALDQFLRETDWAPLDVLVLDMPPGTGDVQLSIAQRVPLAGAVIVSTPQDIALLDARKGLAMFRKVEVPILGLVENMSWFTCPHCGGRSDIFGHGGARDEALKLGLPFLGAVPLDLDVRIMSDEGRPVVAVAPESEAAAPYHAIAAGVVESLGRVRREPPRIIIED
SIO_010081: TMO_RS28790
subclass of: SO_0000673
so part of: TMO_RS28790
location: complement(62650..63840)
location: region:62650-63840:-1
so has part: feature:62650-63840:-1:exon

WP_041608263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62650-63840:-1:exon

TMO_RS28795
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
gene: hflK
locus tag: TMO_RS28795
old locus tag: TMO_d0059
so part of: sequence
location: 64176..65366
location: region:64176-65366:1
so has part: feature:64176-65366:1:exon
subclass of: SO_0000010

position:64176:1
position: 64176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65366:1
position: 65366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64176-65366:1:exon

TMO_RS28795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
gene: hflK
locus tag: TMO_RS28795
old locus tag: TMO_d0059
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019014957.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0045861 - negative regulation of proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FtsH protease activity modulator HflK
translation: MPWNTPGGGQGGGPQGPWGRGPNGPQPPDLDELLRRSQEKMRRVLPGGGGGSGGGRLIALVAAVGVAIWLGTGFYRVQPDEQGVELVFGRWVNTTTPGLHYNWPAPIGEVYKPAVTRVNRVEIGYRSGTDFGRAAGVREVNAESLMLTGDENIIDIDVTVFWRIKDAGAYLFEIQRPDTTIKSVAESAMREVVGQTPLQFVLTEGRARIEQQTRELIQATLDTYKSGVEVTQVQLQKVDPPQQVIDAFRDVQAARADQERLQNEAEAYRNSILPRARGEAERLIQEAQAYREQVVADAQGSAERFTSILTAYNEAKDITARRLYLETMEDVMAGMSKVVIEPGVTGGQGGGQSVVPYLPLDRLIREPAPRTGDGADMSSSSGAASAAQGNATTTPR
SIO_010081: TMO_RS28795
subclass of: SO_0000673
so part of: TMO_RS28795
location: 64176..65366
location: region:64176-65366:1
so has part: feature:64176-65366:1:exon

WP_041608265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64176-65366:1:exon

TMO_RS28800
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
gene: hflC
locus tag: TMO_RS28800
old locus tag: TMO_d0060
so part of: sequence
location: 65385..66287
location: region:65385-66287:1
so has part: feature:65385-66287:1:exon
subclass of: SO_0000010

position:65385:1
position: 65385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66287:1
position: 66287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65385-66287:1:exon

TMO_RS28800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
gene: hflC
locus tag: TMO_RS28800
old locus tag: TMO_d0060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008945125.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0045861 - negative regulation of proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protease modulator HflC
translation: MRKGLLTVGAIVVAAAAVVGISSTYVVHQTEQALVLQFGEPRKVVQEPGLHFKLPFVQNVVYYDNRVLDFDADVQEVIASDQKRLVVDSFARFRITDPLRFYQAVGSEAVVRARLDSIVNASLRNVLGSVPLGTVLTSQRAQLMSQTASIVNNEAKSFGIEVLDVRMRRVDLPEANSQAIFNRMRTEREREATELRAQGAELAQRIRSRADRERTVLLAEARRESQIARGEGDAQASRIFAESFGKDAQFFDFYRSLQAYRTALGNSDTTMVLTPDGDFFRYFGADGQLRLPGQTPAAGN
SIO_010081: TMO_RS28800
subclass of: SO_0000673
so part of: TMO_RS28800
location: 65385..66287
location: region:65385-66287:1
so has part: feature:65385-66287:1:exon

WP_014748601.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65385-66287:1:exon

TMO_RS28805
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28805
old locus tag: TMO_d0061
so part of: sequence
location: 66495..66776
location: region:66495-66776:1
so has part: feature:66495-66776:1:exon
subclass of: SO_0000010

position:66495:1
position: 66495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66776:1
position: 66776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66495-66776:1:exon

TMO_RS28805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28805
old locus tag: TMO_d0061
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017271873.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRVAIKVLTTVTAPYGGALSAHDLAGRIADPGSAERCDPLVFAFFSEVSPRLQQAFIDEMHVDPTAARQVASRFSELAGYSLPFADESRFAA
SIO_010081: TMO_RS28805
subclass of: SO_0000673
so part of: TMO_RS28805
location: 66495..66776
location: region:66495-66776:1
so has part: feature:66495-66776:1:exon

WP_014748602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66495-66776:1:exon

TMO_RS28810
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28810
old locus tag: TMO_d0064
so part of: sequence
location: complement(66809..67819)
location: region:66809-67819:-1
so has part: feature:66809-67819:-1:exon
subclass of: SO_0000010

position:66809:-1
position: 66809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67819:-1
position: 67819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66809-67819:-1:exon

TMO_RS28810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28810
old locus tag: TMO_d0064
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011445012.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldo/keto reductase
translation: MRYRRLGRSGLLVSEISLGTMTFGSQLDERTSVRIMAEAFEAGVTLFDTAEMYAVPQTPETQGASERILGAFLKTVPRDRVIVATKVSGPGDGPGRGIVGHIRGGLCALDRFHIERAVEESLKRLGTDVIDLYQTHWPDRVTPMDDQLEALDRLVRAGKVRYLGVSNETPWGLTRLAARAEALGTARIVSLQNVYHLLKRVYDDGMSEVCVNEGIGMLAFSPIAMGVLTGKYGATGGAGPEARLNAFPPRFQARYGHARAIAAADRYVALAREHGLHPATMAVAWTLGRPGIASALPGVSRPDQLAPILAAADIDLSPDLLQAIEAVHREMPNPVV
SIO_010081: TMO_RS28810
subclass of: SO_0000673
so part of: TMO_RS28810
location: complement(66809..67819)
location: region:66809-67819:-1
so has part: feature:66809-67819:-1:exon

WP_014748603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66809-67819:-1:exon

TMO_RS28815
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28815
old locus tag: TMO_d0062
so part of: sequence
location: 67990..68175
location: region:67990-68175:1
so has part: feature:67990-68175:1:exon
subclass of: SO_0000010

position:67990:1
position: 67990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68175:1
position: 68175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67990-68175:1:exon

TMO_RS28815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28815
old locus tag: TMO_d0062
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008190419.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2065 domain-containing protein
translation: MNDLLTAIGLVLVFEGAVYALFPRGMKRMIVAVLAEPEDRLRVGGAVIAAIGVGLVWWLRG
SIO_010081: TMO_RS28815
subclass of: SO_0000673
so part of: TMO_RS28815
location: 67990..68175
location: region:67990-68175:1
so has part: feature:67990-68175:1:exon

WP_014748604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67990-68175:1:exon

TMO_RS28820
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28820
old locus tag: TMO_d0063
so part of: sequence
location: 68267..69739
location: region:68267-69739:1
so has part: feature:68267-69739:1:exon
subclass of: SO_0000010

position:68267:1
position: 68267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69739:1
position: 69739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68267-69739:1:exon

TMO_RS28820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28820
old locus tag: TMO_d0063
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018640846.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DegQ family serine endoprotease
translation: MPASLPHRIFSGLAALTIATCVALGAGPADARPAPESFADLVEKLTPAVVNISTTQNVEVQGPQIPIPQFPPGSPFEDLFRDFFGDRSGPGGGTRKVTALGSGFVIDAGGLVVTNNHVIKDADEISVILTDNTELPAEVVGTDPKTDLAVLRVKSPKPLPAVAWGDSAKSRVGDWVIAVGNPFGLGGSVTAGIISARARDINVGPFDDFLQTDAAINRGNSGGPMFNMAGEVIGINTAIFSPTGGSVGIGFAVPSELARPVIEQLVEYGRTRRGWLGVQIQPVTPDIAESLSLDKAHGALVARVMPDSPAAKAGIEVGDVVLRFDGKDVTEMRELPRIVAETEINRSVPVEVWRNGRKIEVKVTVGELDESDLAQATEEPGQEQAPQGTGTKVAALGLTVAQADGAVRDRFGLGADVEGVVITEIDANGPADDKPIRVGDVIVDIGQRKVEKVADIEAAIKEARDAGRKSVLLLVRTGDDSRFVAIRLKD
SIO_010081: TMO_RS28820
subclass of: SO_0000673
so part of: TMO_RS28820
location: 68267..69739
location: region:68267-69739:1
so has part: feature:68267-69739:1:exon

WP_014748605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68267-69739:1:exon

TMO_RS28825
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
gene: serB
locus tag: TMO_RS28825
old locus tag: TMO_d0065
so part of: sequence
location: complement(69825..70751)
location: region:69825-70751:-1
so has part: feature:69825-70751:-1:exon
subclass of: SO_0000010

position:69825:-1
position: 69825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70751:-1
position: 70751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69825-70751:-1:exon

TMO_RS28825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
gene: serB
locus tag: TMO_RS28825
old locus tag: TMO_d0065
EC number: 3.1.3.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018263561.1
GO function: GO:0036424 - L-phosphoserine phosphatase activity [Evidence IEA]
GO process: GO:0006564 - L-serine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoserine phosphatase SerB
translation: MGTVLTLIGDPVKAGSGETVLDQGTIDLVRRAVEAAGHATGTVTALHDGVAVDIAAEGEAAAVGDAAEAALAGAGLPVDAAAQPDGPTRRRRLLVSDMDSTMITCECIDELADFAGVKAEVSAVTERAMRGELDFAEALTARVATLAGLADGVLARAFGERVRLMPGARTLVATMRSQGARAVLVSGGFTYFTARVAALCGFDDHRANVLEIEDGRLTGRVIPPILGADAKVEALDHYAGLWAGGLGGALAVGDGANDLPMIVQAGLGVAYHAKPRVAAAAPVRINHGDLTALLYLQGYARDEFLVAD
SIO_010081: TMO_RS28825
subclass of: SO_0000673
so part of: TMO_RS28825
location: complement(69825..70751)
location: region:69825-70751:-1
so has part: feature:69825-70751:-1:exon

WP_041608268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69825-70751:-1:exon

TMO_RS28830
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
gene: miaA
locus tag: TMO_RS28830
old locus tag: TMO_d0066
so part of: sequence
location: 70814..71782
location: region:70814-71782:1
so has part: feature:70814-71782:1:exon
subclass of: SO_0000010

position:70814:1
position: 70814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71782:1
position: 71782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70814-71782:1:exon

TMO_RS28830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
gene: miaA
locus tag: TMO_RS28830
old locus tag: TMO_d0066
EC number: 2.5.1.75
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009540573.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
translation: MQRSNPAPAGAGPLIVVMGPTASGKSQLALDLARARDGVVINADAMQVYADLRIVTARPSEVDEAAAPHRLYGVRPAEAVWSAADWAAAARAEIAAAHEAGRLPLITGGTGLYIRALVEGLSDLPAIPQDLRDEVRALGLAGGVPALKAALAPLDPEAAQRLADPQRLARALEVVRATGRSLADWQRAHPPAGGHAGPVFTIALMPDAGTRDRAIAGRFVKMLEMGAADEVAAFLARGLDPQAVPLMKAVGVPEIGAWLAGEISRDEMLERGRVATRQYAKRQMTWIRNQAHINLGAHEQYSECLASRIFLEIDLFLLTLGH
SIO_010081: TMO_RS28830
subclass of: SO_0000673
so part of: TMO_RS28830
location: 70814..71782
location: region:70814-71782:1
so has part: feature:70814-71782:1:exon

WP_014748607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70814-71782:1:exon

TMO_RS28835
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28835
old locus tag: TMO_d0067
so part of: sequence
location: 72021..73772
location: region:72021-73772:1
so has part: feature:72021-73772:1:exon
subclass of: SO_0000010

position:72021:1
position: 72021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73772:1
position: 73772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72021-73772:1:exon

TMO_RS28835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28835
old locus tag: TMO_d0067
EC number: 2.2.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014414543.1
GO function: GO:0003984 - acetolactate synthase activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO process: GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetolactate synthase 3 large subunit
translation: MQFTGAEILIKALADQGVEVIFGYPGGAVLPIYDALYKQNSVRHYLVRHEQAAVHAAEGYARSTGKVGVVLVTSGPGATNAVTGLTDALMDSIPIVCLTGQVPTHMIGNDAFQEADTVGITRPCTKHNYLIRDVNVLAAKVHEAFHVARSGRPGPVVIDLPKDVLNTLAAYTAPDALPAPTYRPQVTPEQAAIERAVDLMLKADRPVFYVGGGVINAGTEACDNLVRLVRATGFPITMTLMGLGAYPASDRQSLGMLGMHGTLEANLAMHGSDLMINLGARFDDRVTGRLDGFSPDSIKIHADIDPSSINKNVAVDLPIVGDAGNTIRALLEVWERRKAEHDPARIGDWWEKISGWRAQNSLGFQNSAQIIKPQYAIRRLWEMTRDRNPYITTEVGQHQMWAAQHFGFDQPNHWMTSGGLGTMGYGLPAAMGVQVAHPDALVIDIAGEASTMMNIQELSSLIQHRLPVKVFILNNEWMGMVRQWQELFHGGRYSESYSAALPDFVKLAEAFGAKGLRAHSPDDLDDVIREMLAHDGPVVVDVRVDKGENVYPMIPAGAAHHEIILGPGQELDACKSEDGMVLV
SIO_010081: TMO_RS28835
subclass of: SO_0000673
so part of: TMO_RS28835
location: 72021..73772
location: region:72021-73772:1
so has part: feature:72021-73772:1:exon

WP_014748608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72021-73772:1:exon

TMO_RS28840
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
gene: ilvN
locus tag: TMO_RS28840
old locus tag: TMO_d0068
so part of: sequence
location: 73882..74418
location: region:73882-74418:1
so has part: feature:73882-74418:1:exon
subclass of: SO_0000010

position:73882:1
position: 73882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74418:1
position: 74418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73882-74418:1:exon

TMO_RS28840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
gene: ilvN
locus tag: TMO_RS28840
old locus tag: TMO_d0068
EC number: 2.2.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008891745.1
GO function: GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
GO process: GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetolactate synthase small subunit
translation: MVIKNEPITQHTISVLVDNESGVLARVIGLFSGRGYNIDSLTVAEVNEARTRSRITIVTSGTPMIIEQIKAQLTRLVPVHAVTDLTQSGPFVGRELALVKVACTGDRRVESLRIADIFRARVVDSTHESFIFEMTGSTEKIEAFINLMRPLGLADVARTGIAALSRGAAPLASERGRV
SIO_010081: TMO_RS28840
subclass of: SO_0000673
so part of: TMO_RS28840
location: 73882..74418
location: region:73882-74418:1
so has part: feature:73882-74418:1:exon

WP_014748609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73882-74418:1:exon

TMO_RS28845
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
gene: ilvC
locus tag: TMO_RS28845
old locus tag: TMO_d0069
so part of: sequence
location: 74591..75607
location: region:74591-75607:1
so has part: feature:74591-75607:1:exon
subclass of: SO_0000010

position:74591:1
position: 74591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75607:1
position: 75607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74591-75607:1:exon

TMO_RS28845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
gene: ilvC
locus tag: TMO_RS28845
old locus tag: TMO_d0069
EC number: 1.1.1.86
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011388228.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ketol-acid reductoisomerase
translation: MRVYYDRDADLNLIKTKTVAIIGYGSQGHAHAANLRDSGINVIVGLRAGSATRAKAEGAGFAVHTPDEAAKLADVVMVLTPDELHAELYEQDLRDNLKEGAALVVAHGLSIHFGLIQPRADIDVFMIAPKGPGHTVRSEYLKGGGVPSLVAVAQDVSGNALETALSYACGLGAGRAGIIETTFKEECETDLFGEQAVLCGGVTHLITAGFETLVEAGYAPEMAYFECLHEMKLIVDLMYEGGIANMRYSISNTAEYGDYVSGPRVITPAVKAEMKKILEDIQGGRFTRDWVLENAARQSSFKAMRRRNAEHQIEEIGEKLRAMMPWIAANRLVDKTKN
SIO_010081: TMO_RS28845
subclass of: SO_0000673
so part of: TMO_RS28845
location: 74591..75607
location: region:74591-75607:1
so has part: feature:74591-75607:1:exon

WP_041608293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74591-75607:1:exon

TMO_RS28850
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28850
old locus tag: TMO_d0070
so part of: sequence
location: 75738..76763
location: region:75738-76763:1
so has part: feature:75738-76763:1:exon
subclass of: SO_0000010

position:75738:1
position: 75738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76763:1
position: 76763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75738-76763:1:exon

TMO_RS28850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28850
old locus tag: TMO_d0070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014527164.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YihY/virulence factor BrkB family protein
translation: MTAEDGRTGTLRGQAESGLDPDGAPAEHEARGRHARGPDEMPMRGWKDVLWRTVRQVIEDRVEAVAAGVAFYTLLAIFPGITALISIYGLFADPAAVVEHMTLLGDVLPAGPVQLMSEQMLRVSRQPQGQLGFGALFSLAIALWSANQGMKAMFDALDVAYGERQSRSFVVFTAVTLGFTLAAILSTALVLAALALLPVALDVLPLGTSAEQLLDIGRWPLLVLIVVLGTSVLYRYAPSRRTAHWRWVTPGGCLAAVVWLIASMAFSWYVANLAGYDRMYGPLGAVVVFMTWIWISVMIVLVGAELNAELEHQTACDSTEGQPKPMGHRGAYVADTLGKLP
SIO_010081: TMO_RS28850
subclass of: SO_0000673
so part of: TMO_RS28850
location: 75738..76763
location: region:75738-76763:1
so has part: feature:75738-76763:1:exon

WP_145978543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75738-76763:1:exon

TMO_RS28855
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28855
old locus tag: TMO_d0071
so part of: sequence
location: complement(76790..77386)
location: region:76790-77386:-1
so has part: feature:76790-77386:-1:exon
subclass of: SO_0000010

position:76790:-1
position: 76790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77386:-1
position: 77386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76790-77386:-1:exon

TMO_RS28855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28855
old locus tag: TMO_d0071
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011394192.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF924 family protein
translation: MLTDLATALRAEEAVIADGATLDRVLDYWFGELGPSDWFGAGERLDEVIGDRFGRVLAAARRGCCAPWRSTPRGRLAEILVLDQFSRHIHRGTPDAFAADGMALALAQEAVAGGHDLKLTVTERKFLYLPFEHSESLSVHVQAMALFTALGDADALDWERRHLAVLERFGRYPHRNEVLGRVSTPEEQVYLEEPGAGF
SIO_010081: TMO_RS28855
subclass of: SO_0000673
so part of: TMO_RS28855
location: complement(76790..77386)
location: region:76790-77386:-1
so has part: feature:76790-77386:-1:exon

WP_014748612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76790-77386:-1:exon

TMO_RS28860
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28860
old locus tag: TMO_d0072
so part of: sequence
location: complement(77488..77913)
location: region:77488-77913:-1
so has part: feature:77488-77913:-1:exon
subclass of: SO_0000010

position:77488:-1
position: 77488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77913:-1
position: 77913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77488-77913:-1:exon

TMO_RS28860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1110502
locus tag: TMO_RS28860
old locus tag: TMO_d0072
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTITPPDAPVLGTAGFDLSCWPVVRGRSPAGDLAMVEAWIDALTLILDSGQRFAVVMDMPGTITADAATLTEGRKKVILWMKQRREDLAARCGGFVYLPADPAEIEELAAKTAQVAAAFPFPLHVAPDEAAALERAHSLTH
SIO_010081: TMO_RS28860
subclass of: SO_0000673
so part of: TMO_RS28860
location: complement(77488..77913)
location: region:77488-77913:-1
so has part: feature:77488-77913:-1:exon

WP_014748613.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77488-77913:-1:exon

TMO_RS28865
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28865
old locus tag: TMO_rd01
so part of: sequence
location: 78439..79939
location: region:78439-79939:1
so has part: feature:78439-79939:1:exon
subclass of: SO_0000573

position:78439:1
position: 78439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79939:1
position: 79939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78439-79939:1:exon

TMO_RS28865
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1110502
locus tag: TMO_RS28865
old locus tag: TMO_rd01
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TMO_RS28865
subclass of: SO_0000673
so part of: TMO_RS28865
location: 78439..79939
location: region:78439-79939:1
so has part: feature:78439-79939:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78439-79939:1:exon

TMO_RS28870
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28870
old locus tag: TMO_rd02
so part of: sequence
location: 79994..80070
location: region:79994-80070:1
so has part: feature:79994-80070:1:exon
subclass of: SO_0000663

position:79994:1
position: 79994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80070:1
position: 80070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79994-80070:1:exon

TMO_RS28870
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1110502
locus tag: TMO_RS28870
old locus tag: TMO_rd02
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:80028..80030,aa:Ile,seq:gat)
SIO_010081: TMO_RS28870
subclass of: SO_0000673
so part of: TMO_RS28870
location: 79994..80070
location: region:79994-80070:1
so has part: feature:79994-80070:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:79994-80070:1:exon

TMO_RS28875
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28875
old locus tag: TMO_rd03
so part of: sequence
location: 80369..83113
location: region:80369-83113:1
so has part: feature:80369-83113:1:exon
subclass of: SO_0000573

position:80369:1
position: 80369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83113:1
position: 83113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80369-83113:1:exon

TMO_RS28875
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1110502
locus tag: TMO_RS28875
old locus tag: TMO_rd03
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TMO_RS28875
subclass of: SO_0000673
so part of: TMO_RS28875
location: 80369..83113
location: region:80369-83113:1
so has part: feature:80369-83113:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:80369-83113:1:exon

TMO_RS28880
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
gene: rrf
locus tag: TMO_RS28880
old locus tag: TMO_rd04
so part of: sequence
location: 83242..83356
location: region:83242-83356:1
so has part: feature:83242-83356:1:exon
subclass of: SO_0000573

position:83242:1
position: 83242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83356:1
position: 83356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83242-83356:1:exon

TMO_RS28880
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1110502
gene: rrf
locus tag: TMO_RS28880
old locus tag: TMO_rd04
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TMO_RS28880
subclass of: SO_0000673
so part of: TMO_RS28880
location: 83242..83356
location: region:83242-83356:1
so has part: feature:83242-83356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:83242-83356:1:exon

TMO_RS28885
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28885
old locus tag: TMO_rd05
so part of: sequence
location: 83445..83521
location: region:83445-83521:1
so has part: feature:83445-83521:1:exon
subclass of: SO_0000663

position:83445:1
position: 83445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83521:1
position: 83521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83445-83521:1:exon

TMO_RS28885
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1110502
locus tag: TMO_RS28885
old locus tag: TMO_rd05
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:83479..83481,aa:Met,seq:cat)
SIO_010081: TMO_RS28885
subclass of: SO_0000673
so part of: TMO_RS28885
location: 83445..83521
location: region:83445-83521:1
so has part: feature:83445-83521:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:83445-83521:1:exon

TMO_RS28890
type: Gene
subclass of: SO_0000704
RO_0002162: 1110502
locus tag: TMO_RS28890
old locus tag: TMO_rd06
so part of: sequence
location: 83584..83660
location: region:83584-83660:1
so has part: feature:83584-83660:1:exon
subclass of: SO_0000663

position:83584:1
position: 83584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83660:1
position: 83660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83584-83660:1:exon

TMO_RS28890
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1110502
locus tag: TMO_RS28890
old locus tag: TMO_rd06
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:83618..83620,aa:Met,seq:cat)
SIO_010081: TMO_RS28890
subclass of: SO_0000673
so part of: TMO_RS28890
location: 83584..83660
location: region:83584-83660:1
so has part: feature:83584-83660:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:83584-83660:1:exon