Rickettsia rhipicephali str. 3-7-female6-CWPP plasmid pMCC_1, complete sequence.
type: Entry
definition: Rickettsia rhipicephali str. 3-7-female6-CWPP plasmid pMCC_1, complete sequence.
sequence version: NC_017055.1
sequence date: 2022-12-21
sequence: sequence
division: CON
label: NC_017055.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02603560
keyword: RefSeq
source: Rickettsia rhipicephali str. 3-7-female6-CWPP
organism: Rickettsia rhipicephali str. 3-7-female6-CWPP
taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group.
reference: 1
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP003343.1.\nSequence data and annotation funded by the Intelligence Technology\nInnovation Center and Department of Homeland Security, Science and\nTechnology Directorate.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/21/2022 01:08:29\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,492\nCDSs (total) :: 1,452\nGenes (coding) :: 1,322\nCDSs (with protein) :: 1,322\nGenes (RNA) :: 40\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 33\nncRNAs :: 4\nPseudo Genes (total) :: 130\nCDSs (without protein) :: 130\nPseudo Genes (ambiguous residues) :: 0 of 130\nPseudo Genes (frameshifted) :: 96 of 130\nPseudo Genes (incomplete) :: 44 of 130\nPseudo Genes (internal stop) :: 43 of 130\nPseudo Genes (multiple problems) :: 49 of 130\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 15099
topology: circular
so has quality: SO_0000988
location: 1..15099
location: region:1-15099:1
RO_0002162: 1105113

NC_017055
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02603560
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
author: Johnson, S.L.
author: Munk, A.C.
author: Han, S.
author: Bruce, D.C.
author: Dasch, G.A.
journal: Submitted (22-FEB-2012) Genome Science B6, Los Alamos National Laboratory, PO Box 1663 M888, Los Alamos, NM 87545, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15099:1
position: 15099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-15099:1:source
so part of: sequence
organism: Rickettsia rhipicephali str. 3-7-female6-CWPP
mol type: genomic DNA
strain: 3-7-female6-CWPP
type material: type strain of Rickettsia rhipicephali
plasmid: pMCC_1

1105113
type: Taxonomy
SIO_000068: taxonomy

MCC_RS07065
type: Gene
subclass of: SO_0000704
RO_0002162: 1105113
locus tag: MCC_RS07065
old locus tag: MCC_07705
so part of: sequence
location: join(14456..15099,1..1720)
location: region:1-15099:1
so has part: feature:14456-15099:1:exon
so has part: feature:1-1720:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:14456-15099:1:exon

position:14456:1
position: 14456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-1720:1:exon

position:1720:1
position: 1720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MCC_RS07065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1105113
locus tag: MCC_RS07065
old locus tag: MCC_07705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012152319.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosomal replication initiator protein DnaA
translation: MQSFYPLATPSDNVGIHQYYDTTKNQSYVPITGCVLSHILSSKELSTLEKMYYILADGLSCINFSKGRNRSISLPAKSWAERLSCSKSEVFVLQKSLEDKGHFIITRDKNDQGQNKRNIITTTIPDKVFNDLKYEPDRFDLGDIDNTKTRHSKSDKLDSIDNIFMSTIEGKRQHLEKTKMFIRVPYEFLKQLNSNCSISATAKTITLYLFTKIYKSSLSSNNDKGNRDTDSKDKDNRITTETYIDASNSNQNDYKDVYDHDHSITNNLHSIVTSYQELQKELKLHRNSISRALKDLEDNNLIKRDKRVIRNNDDYNSRADKSLWQISLLNISLINNNDQKKQKEQKQQIVIEYNNNKALEISKEWKCTEYDPPCTDSGQLYNKDFVLKNSIIKNIDYIDVNLKNLSVNDSSNIYKSEENFKKEFLENEQSSFPSEFYNNSSCLNDSEAGCFVSKKEYYETANFKLPRANIHPEIVARTIKDISENKELRHFYPLSEKDVDMLNFKANRGFSTNFVNQLLLKLYIKYPEKKFKNKFTFLSYMEKVLASEKHQGPLVNHTTFRFSCNIGAEEQNMLEYEQYLSHIENSFDTSKEMQVKKKIAGRFSTSIAYSILTQVEFKINANNSFITVLIPSNLALSERQIEILSEQLEAVYGMNGYYVQEVEEVEDTSNERKRRDEEKVMLYPKITTSDIVSNGTHAGILAKSGGLDTIEADTAWYHIRQGLIEELGETMYTAWFEEVVVKECNDTSTLKLTMPTRFMADWVRNNYSHVIQRLGSSAGVKRVEYGY
SIO_010081: MCC_RS07065
subclass of: SO_0000673
so part of: MCC_RS07065
location: join(14456..15099,1..1720)
location: region:1-15099:1
so has part: feature:14456-15099:1:exon
so has part: feature:1-1720:1:exon

WP_041405552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14456-15099:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-1720:1:exon

MCC_RS10775
type: Gene
subclass of: SO_0000704
RO_0002162: 1105113
locus tag: MCC_RS10775
pseudo: true
so part of: sequence
location: 1845..>2063
location: region:1845-2063:1
so has part: feature:1845-2063:1:exon
subclass of: SO_0000010

position:1845:1
position: 1845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2063:1
position: 2063
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1845-2063:1:exon

MCC_RS10775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1105113
locus tag: MCC_RS10775
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611584.1
note: internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: MCC_RS10775
subclass of: SO_0000673
so part of: MCC_RS10775
location: 1845..>2063
location: region:1845-2063:1
so has part: feature:1845-2063:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1845-2063:1:exon

MCC_RS07080
type: Gene
subclass of: SO_0000704
RO_0002162: 1105113
locus tag: MCC_RS07080
old locus tag: MCC_07710
so part of: sequence
location: complement(2283..5240)
location: region:2283-5240:-1
so has part: feature:2283-5240:-1:exon
subclass of: SO_0000010

position:2283:-1
position: 2283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5240:-1
position: 5240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2283-5240:-1:exon

MCC_RS07080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1105113
locus tag: MCC_RS07080
old locus tag: MCC_07710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014372996.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
translation: MTERLTQVVSNIMTYQHIITILQRYDHHFDCTQFDKAIKFLLKYCHNNKYSLEISETLISIYPDTKSVITSLLFFSSVKNHLTLTHIKYHFGEEIATIFFSLAELFRIQNTYCNTIQETFQLFCSLKPNIAIRILLIRFAYLLHKIIFNCNISDIEYYLMSEEIKDIYVPLFKEITIEKINNVLQNVCLEILQPKLYKFISDFLKVNYQNPDQLVIKVINSFHDILSRLDVAYAISGRVKSTYSIAQKLVNKSNEIKNLCDIIGIRVIVTQDNECYKVLNTILNYYAHVPKRNKDFIKCPKKNNYQSLHTVIIDKDLRKLEVQIRTRRMHSIAQSGSASHLQYKLNLQNSNNLDVTHNILNKFIFNTLNQYSSITTIVPKYLRINRLDGLISYIIGSIKPNDRTLKQGVYIYHENTRYYVDTAKIVNVNQKTLTLVSKGKPYIATDTGKTSQLQGVSLQNMWTDQNSIKNSLSMLKKRVSYNTQIKERHLEKQRYTEKNLSSNGELSTNQLQKIKIANTSNKNPNLNDHHAYLKYYIKCTNTHTTSSMQMKSDYELNYINKNLLIDAVIQNNQNTDNPPSRTFSKKLKLQCVQGYKKKDKLFCTEVNLHLQNNSDNTNCSKDKLFYTEVNLHLQNNSNNTNCSKDKLFCTEVNLHLQNNSNNTNCSKDKLFYTEVNLHLQNNSNNTNCSKDKLFCTEVNLHLQNNSNNTNCSKDKLFCTEVNLHLQNNSNNTNCSKDKLFCTEVNLHLQNNSNNTNCSSDVLSSQKRRSQQKNCINIITIKFISDDDIMNIRIEELMTIFKDTQITYLNLRQNYIGDIGVRELAKILNNMHITYLNLSSNAIGLYGIRTLTATVKEMNIIIHLTGQQPYHETDYYDGHFSKLQRIELPQLDPDLVREMANSTSDNTSGNEENDSGCEVWDWDAESDDINDTDSNGTMTIRIGHSNEDVNIDTIKSRIYGINKTPDIEVIHNAQILTEDIDCMGAL
SIO_010081: MCC_RS07080
subclass of: SO_0000673
so part of: MCC_RS07080
location: complement(2283..5240)
location: region:2283-5240:-1
so has part: feature:2283-5240:-1:exon

WP_231288790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2283-5240:-1:exon

MCC_RS07085
type: Gene
subclass of: SO_0000704
RO_0002162: 1105113
locus tag: MCC_RS07085
old locus tag: MCC_07715
so part of: sequence
location: complement(5656..5853)
location: region:5656-5853:-1
so has part: feature:5656-5853:-1:exon
subclass of: SO_0000010

position:5656:-1
position: 5656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5853:-1
position: 5853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5656-5853:-1:exon

MCC_RS07085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1105113
locus tag: MCC_RS07085
old locus tag: MCC_07715
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRLNKIKARFAHTTKEDKNAKAKIEYARGCGDRAYEANQQKHQDFTGSKTAAARKQRREDFRGI
SIO_010081: MCC_RS07085
subclass of: SO_0000673
so part of: MCC_RS07085
location: complement(5656..5853)
location: region:5656-5853:-1
so has part: feature:5656-5853:-1:exon

WP_014411946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5656-5853:-1:exon

MCC_RS07090
type: Gene
subclass of: SO_0000704
RO_0002162: 1105113
locus tag: MCC_RS07090
old locus tag: MCC_07720
so part of: sequence
location: 6508..7059
location: region:6508-7059:1
so has part: feature:6508-7059:1:exon
subclass of: SO_0000010

position:6508:1
position: 6508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7059:1
position: 7059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6508-7059:1:exon

MCC_RS07090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1105113
locus tag: MCC_RS07090
old locus tag: MCC_07720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014372994.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MATVGYARVSSSGQSLSVQLDKLKDCDKIFQEKKSGFGGTRSVLKNALDYVREGDIFTVTKLDRLARSTAHLCKIAEILEQKSVALKVLDQNIDTKDATGRLIFNVLGAIGQFETEIRAERQMDGILKAKERGVKFGKKKYLTHEQLSALKEKREQGVKIKTLMQEFNLSKATIYRYLAQELI
SIO_010081: MCC_RS07090
subclass of: SO_0000673
so part of: MCC_RS07090
location: 6508..7059
location: region:6508-7059:1
so has part: feature:6508-7059:1:exon

WP_012152323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6508-7059:1:exon

MCC_RS07095
type: Gene
subclass of: SO_0000704
RO_0002162: 1105113
locus tag: MCC_RS07095
old locus tag: MCC_07725
so part of: sequence
location: complement(7259..8302)
location: region:7259-8302:-1
so has part: feature:7259-8302:-1:exon
subclass of: SO_0000010

position:7259:-1
position: 7259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8302:-1
position: 8302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7259-8302:-1:exon

MCC_RS07095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1105113
locus tag: MCC_RS07095
old locus tag: MCC_07725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014411947.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MTNEEHNQKQQQTELENSGVSERPRHDELFKKVMSEPIAAREFLEHYLPVSFKNKINLNSVKIEKESFVTEDLKKRFSDVVYSVSLKNDNVKDSTTDSVDNDKAYVYVLIEHQSSSDYWIAFRLWQYMLLLCERHKDANKGNNKQERDKLPLICPIVVYANDKPYNAPRSFWELFEDSNTAKTLMLDEYLLVDLQKQSDDEIEKKKHLGMMEYMLKHIKARDILNLWQSLLERFKSSIEIDKENGYIYIKWLLWYSDAKVDADKQAELAKIIAKHLNKADGEGLMRTIADKYIDEGIAQGMQIGKNEGKHERTMEVAKNMLSNNYSIPEISRITGLSISEINNLLKA
SIO_010081: MCC_RS07095
subclass of: SO_0000673
so part of: MCC_RS07095
location: complement(7259..8302)
location: region:7259-8302:-1
so has part: feature:7259-8302:-1:exon

WP_014411947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7259-8302:-1:exon

MCC_RS07100
type: Gene
subclass of: SO_0000704
RO_0002162: 1105113
locus tag: MCC_RS07100
old locus tag: MCC_07730
so part of: sequence
location: complement(8315..8668)
location: region:8315-8668:-1
so has part: feature:8315-8668:-1:exon
subclass of: SO_0000010

position:8315:-1
position: 8315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8668:-1
position: 8668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8315-8668:-1:exon

MCC_RS07100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1105113
locus tag: MCC_RS07100
old locus tag: MCC_07730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013747307.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHNMIVYAQKHGILKDHEILINSSDSHNALKTLSTTCEKHYMEHRGENIKQLLDDEHGMVGAKKYSYSLKYMKHGMQNNIPGFVDEKPVASTFAKVKAEVKEPRLEKELEHTMTMRL
SIO_010081: MCC_RS07100
subclass of: SO_0000673
so part of: MCC_RS07100
location: complement(8315..8668)
location: region:8315-8668:-1
so has part: feature:8315-8668:-1:exon

WP_014411948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8315-8668:-1:exon

MCC_RS09260
type: Gene
subclass of: SO_0000704
RO_0002162: 1105113
locus tag: MCC_RS09260
so part of: sequence
location: 8698..8985
location: region:8698-8985:1
so has part: feature:8698-8985:1:exon
subclass of: SO_0000010

position:8698:1
position: 8698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8985:1
position: 8985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8698-8985:1:exon

MCC_RS09260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1105113
locus tag: MCC_RS09260
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MLISFLKLSKYDDEWLRVGQQLLLLQRSTDKRRCYRSALLCFKSVIKTHSDNYVAYYFGGITLCLLGSYDEAIKMFDMSLRCNKEESTALVHTFI
SIO_010081: MCC_RS09260
subclass of: SO_0000673
so part of: MCC_RS09260
location: 8698..8985
location: region:8698-8985:1
so has part: feature:8698-8985:1:exon

WP_197407966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8698-8985:1:exon

MCC_RS10780
type: Gene
subclass of: SO_0000704
RO_0002162: 1105113
locus tag: MCC_RS10780
pseudo: true
so part of: sequence
location: <9341..9907
location: region:9341-9907:1
so has part: feature:9341-9907:1:exon
subclass of: SO_0000010

position:9341:1
position: 9341
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:9907:1
position: 9907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9341-9907:1:exon

MCC_RS10780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1105113
locus tag: MCC_RS10780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012476889.1
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: integrase core domain-containing protein
SIO_010081: MCC_RS10780
subclass of: SO_0000673
so part of: MCC_RS10780
location: <9341..9907
location: region:9341-9907:1
so has part: feature:9341-9907:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9341-9907:1:exon

MCC_RS07110
type: Gene
subclass of: SO_0000704
RO_0002162: 1105113
locus tag: MCC_RS07110
old locus tag: MCC_07745
so part of: sequence
location: complement(10049..11260)
location: region:10049-11260:-1
so has part: feature:10049-11260:-1:exon
subclass of: SO_0000010

position:10049:-1
position: 10049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11260:-1
position: 11260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10049-11260:-1:exon

MCC_RS07110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1105113
locus tag: MCC_RS07110
old locus tag: MCC_07745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013006753.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDQQLISSKCFPTDNCSLDTKVGCNIFELLNDNTKSLGLKAYVEHLNGTIFRIVSSFNNTRIFGTEYKIFSPGNTPLLYEHQCFTDESILIKNVHKVVLQGYDVSMRTTKTGKCGIFLIKYMSDKLKHMLQEVTPDVINNTTSSILDFFFTTVTENTSLNYTNEVIDYNSTNSTDISNYDEHSQDNTMLVGGLVLASAVSITYLLTCMYNKYCKKTPVAQTETADINISDPALIEINSRKAKIYYSDNSSADGKEYAIVDISSKRAKYTKATYDTSNPSSSHSDDYERMELIDTSNPSSSHSDDYERMELIDTSNPSSSHSDDYERMELMSSTDSSTQDSSHVNSHRLAQLHIEDRDSGIPICDNCEPIYDYPQLPPRPATFYIPIAQHHDDSSILGLSEFLC
SIO_010081: MCC_RS07110
subclass of: SO_0000673
so part of: MCC_RS07110
location: complement(10049..11260)
location: region:10049-11260:-1
so has part: feature:10049-11260:-1:exon

WP_231288789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10049-11260:-1:exon

MCC_RS09270
type: Gene
subclass of: SO_0000704
RO_0002162: 1105113
locus tag: MCC_RS09270
old locus tag: MCC_07750
so part of: sequence
location: complement(11631..11780)
location: region:11631-11780:-1
so has part: feature:11631-11780:-1:exon
subclass of: SO_0000010

position:11631:-1
position: 11631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11780:-1
position: 11780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11631-11780:-1:exon

MCC_RS09270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1105113
locus tag: MCC_RS09270
old locus tag: MCC_07750
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFTGYKKLLIEGAQRFNLDGASASLVTKEEVPPKTKNTLNSLNLTQTPN
SIO_010081: MCC_RS09270
subclass of: SO_0000673
so part of: MCC_RS09270
location: complement(11631..11780)
location: region:11631-11780:-1
so has part: feature:11631-11780:-1:exon

WP_014411952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11631-11780:-1:exon

MCC_RS07115
type: Gene
subclass of: SO_0000704
RO_0002162: 1105113
locus tag: MCC_RS07115
old locus tag: MCC_07755
so part of: sequence
location: 12373..12858
location: region:12373-12858:1
so has part: feature:12373-12858:1:exon
subclass of: SO_0000010

position:12373:1
position: 12373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12858:1
position: 12858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12373-12858:1:exon

MCC_RS07115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1105113
locus tag: MCC_RS07115
old locus tag: MCC_07755
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013006748.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MDISLRIQKFLSQKIKTYKIQQKDLVLGTSLSRSTISKLLNAILLNPNIITILKIATFFECDIDEVLGRAKFIKNTKKYQLYVSLTLNDINNHLLSFLKTKIQQLNITEYILEKNCRVGSSTITHFINTNSDNRILSTKVIVKLADYFQISIDEMIGRTKI
SIO_010081: MCC_RS07115
subclass of: SO_0000673
so part of: MCC_RS07115
location: 12373..12858
location: region:12373-12858:1
so has part: feature:12373-12858:1:exon

WP_012152329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12373-12858:1:exon

MCC_RS07120
type: Gene
subclass of: SO_0000704
RO_0002162: 1105113
locus tag: MCC_RS07120
old locus tag: MCC_07760
so part of: sequence
location: complement(13031..13261)
location: region:13031-13261:-1
so has part: feature:13031-13261:-1:exon
subclass of: SO_0000010

position:13031:-1
position: 13031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13261:-1
position: 13261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13031-13261:-1:exon

MCC_RS07120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1105113
locus tag: MCC_RS07120
old locus tag: MCC_07760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014372990.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix domain-containing protein
translation: MTGKRIEFPKKPVQKNTTQFIDAWVSGNIKHAQQDQKHKRTTIFLPEELHKKLKIEAARREVTMTEIIIEAVEKSI
SIO_010081: MCC_RS07120
subclass of: SO_0000673
so part of: MCC_RS07120
location: complement(13031..13261)
location: region:13031-13261:-1
so has part: feature:13031-13261:-1:exon

WP_014372990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13031-13261:-1:exon

MCC_RS07125
type: Gene
subclass of: SO_0000704
RO_0002162: 1105113
locus tag: MCC_RS07125
old locus tag: MCC_07765
so part of: sequence
location: complement(13273..13914)
location: region:13273-13914:-1
so has part: feature:13273-13914:-1:exon
subclass of: SO_0000010

position:13273:-1
position: 13273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13914:-1
position: 13914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13273-13914:-1:exon

MCC_RS07125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1105113
locus tag: MCC_RS07125
old locus tag: MCC_07765
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012152330.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MILSFLNQKGGVGKTTLSINVATCLSLKKQKVLLIDADPQNSSLDWIAIRRKESLFTVVGLTKPIIHKEVSKLVKNYDHIIIDGPPRIYDVAKSAIVTSDLVVMPVQPSPYDIWAANEVVSLIKEVSQPLEGRKNIKSAFLINRKISNTAIGRDVEQALDHYGMDILQTHICQRVAYAETAAIGSTVMEEHNRDNLAVREITDLTNEILEKYN
SIO_010081: MCC_RS07125
subclass of: SO_0000673
so part of: MCC_RS07125
location: complement(13273..13914)
location: region:13273-13914:-1
so has part: feature:13273-13914:-1:exon

WP_014411953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13273-13914:-1:exon

MCC_RS07130
type: Gene
subclass of: SO_0000704
RO_0002162: 1105113
locus tag: MCC_RS07130
old locus tag: MCC_07770
so part of: sequence
location: 14124..14303
location: region:14124-14303:1
so has part: feature:14124-14303:1:exon
subclass of: SO_0000010

position:14124:1
position: 14124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14303:1
position: 14303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14124-14303:1:exon

MCC_RS07130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1105113
locus tag: MCC_RS07130
old locus tag: MCC_07770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014372988.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKKINVKRISLDIPEHIIEKIDKICAENFITRRKWFIDAANDKLEKYELNKIDMIVKK
SIO_010081: MCC_RS07130
subclass of: SO_0000673
so part of: MCC_RS07130
location: 14124..14303
location: region:14124-14303:1
so has part: feature:14124-14303:1:exon

WP_014372988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14124-14303:1:exon