Borrelia turcica IST7 plasmid cp33, complete sequence.
type: Entry
definition: Borrelia turcica IST7 plasmid cp33, complete sequence.
sequence version: NZ_CP028888.1
sequence date: 2023-02-24
sequence: sequence
division: CON
label: NZ_CP028888.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN08918700
keyword: RefSeq
source: Borrelia turcica IST7
organism: Borrelia turcica IST7
taxonomy: Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Borreliaceae; Borrelia.
reference: 1
references: 30240834
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP028888.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. v2.3.0; other v. 9.5.3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 48.0x\nSequencing Technology :: PacBio; Illumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/23/2023 23:20:26\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,277\nCDSs (total) :: 1,240\nGenes (coding) :: 1,232\nCDSs (with protein) :: 1,232\nGenes (RNA) :: 37\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 31\nncRNAs :: 3\nPseudo Genes (total) :: 8\nCDSs (without protein) :: 8\nPseudo Genes (ambiguous residues) :: 0 of 8\nPseudo Genes (frameshifted) :: 5 of 8\nPseudo Genes (incomplete) :: 3 of 8\nPseudo Genes (internal stop) :: 2 of 8\nPseudo Genes (multiple problems) :: 2 of 8\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 33967
topology: circular
so has quality: SO_0000988
location: 1..33967
location: region:1-33967:1
RO_0002162: 1104446

NZ_CP028888
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN08918700
type: BioSample
SIO_000068: biosample

1
title: Genome-wide analysis of Borrelia turcica and 'Candidatus Borrelia tachyglossi' shows relapsing fever-like genomes with unique genomic links to Lyme disease Borrelia
author: Gofton, A.W.
author: Margos, G.
author: Fingerle, V.
author: Hepner, S.
author: Loh, S.M.
author: Ryan, U.
author: Irwin, P.
author: Oskam, C.L.
journal: Infect Genet Evol 66, 72-81 (2018)
pubmed: 30240834

30240834
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Margos, G.
journal: Submitted (12-APR-2018) German National Reference Centre for Borrelia, Bavarian Health and Food Safety Authority, Veterinarstrasse 2, Oberschleissheim 85764, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33967:1
position: 33967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-33967:1:source
so part of: sequence
organism: Borrelia turcica IST7
mol type: genomic DNA
strain: IST7
isolation source: Hyalomma aegyptium
host: tortoise
type material: type strain of Borrelia turcica
plasmid: cp33
country: Turkey
collection date: 2000
collected by: Yeditepe University, Istanbul, Turkey
genotype: ST793

1104446
type: Taxonomy
SIO_000068: taxonomy

DB313_RS05590
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05590
old locus tag: DB313_05590
so part of: sequence
location: join(33152..33967,1..174)
location: region:1-33967:1
so has part: feature:33152-33967:1:exon
so has part: feature:1-174:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:33152-33967:1:exon

position:33152:1
position: 33152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-174:1:exon

position:174:1
position: 174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DB313_RS05590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05590
old locus tag: DB313_05590
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DUF693 family protein
translation: MVKYDFKIEFYNYDDTNYIIASKPKLTIDTALSKAYIELTIGNNYGTESGMLYKAGSLKIYNVPQTFNENKQLNIKFHDAVKISYKKLAYSNEYHFLLNGLIHTPMDTDYLSRDFSVDYDITNSILNYKINSIFREPADPTSINSPLIKRNINFKGKSIGEAISTVFKGNEELHLPKNITNTKINRAFTCSSLNEFLTALARNYTIICKVEPQDKNNNIDSVYHFYYKTVPKEGGDSFLKPLALEKFGLHFIPQQELKYSTETRQQLVYWNAQVLYTHRIEVNTRVSFNDRFNNLITGVVEETSGSLSNRGACVLNLSIKDDKSTLASI
SIO_010081: DB313_RS05590
subclass of: SO_0000673
so part of: DB313_RS05590
location: join(33152..33967,1..174)
location: region:1-33967:1
so has part: feature:33152-33967:1:exon
so has part: feature:1-174:1:exon

WP_120104932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33152-33967:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-174:1:exon

DB313_RS05595
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05595
old locus tag: DB313_05595
so part of: sequence
location: 186..983
location: region:186-983:1
so has part: feature:186-983:1:exon
subclass of: SO_0000010

position:186:1
position: 186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983:1
position: 983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186-983:1:exon

DB313_RS05595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05595
old locus tag: DB313_05595
inference: COORDINATES: protein motif:HMM:NF017423.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF777 family protein
translation: MQTQNYNEFRYYTNLENMAYIHHETLDKMCQHIFISRLGIVKEFDPKTQEGIVVIPEFGSLNIATKNISNMQLYLKEKDKVILLQSSVNLFDTKDTNYFDKTYFYILNRVDIKTIEKAIIDIDQFALKHHKLDIEAEETINIKSEDKLNIDSQDLALNSSTIKLKSEDKFNIDSQDLALNSSTIKLKSEDKFNIDSQDLALNSSAIKLKSSNPISISTNNESLYGILNSLLDTLQELKFVQEAGAMAELQLKMPLLKVRLQQLLS
SIO_010081: DB313_RS05595
subclass of: SO_0000673
so part of: DB313_RS05595
location: 186..983
location: region:186-983:1
so has part: feature:186-983:1:exon

WP_120104893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186-983:1:exon

DB313_RS05600
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05600
old locus tag: DB313_05600
so part of: sequence
location: 1081..1416
location: region:1081-1416:1
so has part: feature:1081-1416:1:exon
subclass of: SO_0000010

position:1081:1
position: 1081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1416:1
position: 1416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1081-1416:1:exon

DB313_RS05600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05600
old locus tag: DB313_05600
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDIKVNDNFDCILNGGLKLIDAIEEQKQTLFLYLKLPKGSLSWDKAYGVDYDTLLKILKLRDKPRLEFFFTTIATELQLNLSNIETTYLKGRVGVSLYFTQGDFLEMEFSI
SIO_010081: DB313_RS05600
subclass of: SO_0000673
so part of: DB313_RS05600
location: 1081..1416
location: region:1081-1416:1
so has part: feature:1081-1416:1:exon

WP_120104894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1081-1416:1:exon

DB313_RS05605
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05605
old locus tag: DB313_05605
so part of: sequence
location: 1413..2297
location: region:1413-2297:1
so has part: feature:1413-2297:1:exon
subclass of: SO_0000010

position:1413:1
position: 1413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2297:1
position: 2297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1413-2297:1:exon

DB313_RS05605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05605
old locus tag: DB313_05605
inference: COORDINATES: protein motif:HMM:NF015399.2
note: DUF276 is restricted to Borreliella and related spirochetes; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF276 domain-containing protein
translation: MSKPTIFNQESGIILKETEEILNEKKDLLKEKGISLSKNRIFDIINYPSSEIDRQILVALSELFKRIDEGGSFFKEWEAKLSIPSSSTFDAVRKAFLQIDGVDYCNLTSGAGIVALFLIITNKSYFINGEANQLDTKIKNQIWEVFYKVMPSGTAFIGDITVDGLNEMRQKKTYKFSLGKPKYIYMKIYYKINHKDFIHIDIDTKLREIYKQIIDENYKDMGIDYVYQDFLAPVSMIKGIKSIRVGTLVKEDEASESKSIQESEYTFNTDIEINPNEILLFDTKERLLIDIDKE
SIO_010081: DB313_RS05605
subclass of: SO_0000673
so part of: DB313_RS05605
location: 1413..2297
location: region:1413-2297:1
so has part: feature:1413-2297:1:exon

WP_120104895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1413-2297:1:exon

DB313_RS05610
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05610
old locus tag: DB313_05610
so part of: sequence
location: 2301..3062
location: region:2301-3062:1
so has part: feature:2301-3062:1:exon
subclass of: SO_0000010

position:2301:1
position: 2301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3062:1
position: 3062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2301-3062:1:exon

DB313_RS05610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05610
old locus tag: DB313_05610
inference: COORDINATES: protein motif:HMM:NF017093.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF735 family protein
translation: MNINHNSTYDIPEALRNTQLAKIIDNEIEYKKLILNEIKEITNNFSSNNIKSHLKIRFIAKFLAKIFKVYHLDKNLTSDIVNGIDSVLLSREHIGTDNSFNLLFASYLYTNVELTTNKEQAGEIVIKLLNNIKSPFRRYIVHNKLDKVVGNEKVFKFKKIVIIHSKGKFNLMFNYMPLNYTSSIYEFIKSLIPVGRVVRIKDRDNQVIMSNSAQETQEKQFLHKLKEQMKQPASYSHTDELEDTSTDIILTCR
SIO_010081: DB313_RS05610
subclass of: SO_0000673
so part of: DB313_RS05610
location: 2301..3062
location: region:2301-3062:1
so has part: feature:2301-3062:1:exon

WP_120104896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2301-3062:1:exon

DB313_RS05615
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05615
old locus tag: DB313_05615
so part of: sequence
location: 3086..4741
location: region:3086-4741:1
so has part: feature:3086-4741:1:exon
subclass of: SO_0000010

position:3086:1
position: 3086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4741:1
position: 4741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3086-4741:1:exon

DB313_RS05615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05615
old locus tag: DB313_05615
inference: COORDINATES: protein motif:HMM:NF016941.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF685 domain-containing protein
translation: MSQHIDTDNEIQIKDLNKKSKAEPNDLLLLDDPLTSCNAITYKNFYEQIREATYKDLPKLIEYLEKIDTIQDLKEDTSLEEINLNRGNIPTGRKEIIFYLDYSTKKIIPITLKTFAYKIYKHLFGVASQQDSDKTAVSNATQANDWKDDDLVTLLRRENGTLFKATYRDFFKKVKGELINTATKDTAINSNEDNICFYEKDKNRISITTFKRLVDAIISHYTTNENNIDTSYEKITFFDSKNYKFNAYNIDSLKKALDLATYETKANANAKYETKENANKTYVKKSYANSEYETKANVNNHYLKKTDASSVYETKANATKTYLPKASALVVYETKDNANNTYVKKSDASSVYETKANVNNTYVKKSEGITNGNLKLRLKDTFKNTYKASSITSTHQFILRNTSDNDIEILDFPVWLQGAPDDFGGTRTLNNDSHTNEGEYGKTHITLKLETRNETEIRIPQRFKNNSDAYIYLKISVQPIFYSSRGEKDNVKRVFVKFNDESAKREVFQFDAWGQKAHYSDGSYVGHIFPLYNGWYKIITLSDNTLDLIQV
SIO_010081: DB313_RS05615
subclass of: SO_0000673
so part of: DB313_RS05615
location: 3086..4741
location: region:3086-4741:1
so has part: feature:3086-4741:1:exon

WP_120104897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3086-4741:1:exon

DB313_RS06475
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS06475
so part of: sequence
location: 4766..4924
location: region:4766-4924:1
so has part: feature:4766-4924:1:exon
subclass of: SO_0000010

position:4766:1
position: 4766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4924:1
position: 4924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4766-4924:1:exon

DB313_RS06475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS06475
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQDILNFLHNLDLYKFIGLVVAILAIFWLLRPVFTDCVKIMKKILHIKDKQD
SIO_010081: DB313_RS06475
subclass of: SO_0000673
so part of: DB313_RS06475
location: 4766..4924
location: region:4766-4924:1
so has part: feature:4766-4924:1:exon

WP_161555033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4766-4924:1:exon

DB313_RS05620
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05620
old locus tag: DB313_05620
so part of: sequence
location: 4940..5215
location: region:4940-5215:1
so has part: feature:4940-5215:1:exon
subclass of: SO_0000010

position:4940:1
position: 4940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5215:1
position: 5215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4940-5215:1:exon

DB313_RS05620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05620
old locus tag: DB313_05620
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNENKENLSETQNEDATAVKIDTIEHPQVSNIYIGSLMHNVSSILKFANIEHPTINKIVEKSRLIDELVSFTQDIYNTIIADGNKRDINKK
SIO_010081: DB313_RS05620
subclass of: SO_0000673
so part of: DB313_RS05620
location: 4940..5215
location: region:4940-5215:1
so has part: feature:4940-5215:1:exon

WP_120104898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4940-5215:1:exon

DB313_RS06480
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS06480
so part of: sequence
location: 5212..5373
location: region:5212-5373:1
so has part: feature:5212-5373:1:exon
subclass of: SO_0000010

position:5212:1
position: 5212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5373:1
position: 5373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5212-5373:1:exon

DB313_RS06480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS06480
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIDIINVAGQIVANSSNSQEKVELLENLRERRNKLALEKIEALQREIANETYF
SIO_010081: DB313_RS06480
subclass of: SO_0000673
so part of: DB313_RS06480
location: 5212..5373
location: region:5212-5373:1
so has part: feature:5212-5373:1:exon

WP_161555034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5212-5373:1:exon

DB313_RS05625
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05625
old locus tag: DB313_05625
so part of: sequence
location: 5357..5737
location: region:5357-5737:1
so has part: feature:5357-5737:1:exon
subclass of: SO_0000010

position:5357:1
position: 5357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5737:1
position: 5737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5357-5737:1:exon

DB313_RS05625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05625
old locus tag: DB313_05625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014023198.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKHTFNTKIKLFTLFLFTLFIACTTIASIPIEPVMPKEHTLDSLTKYESQLLEYVIYLQVFLVNTKKKVNDKDYPTFTFFNTNKLESTQTINALKANIAYMKEYISLTKPIAEAVYRKYSKQINHK
SIO_010081: DB313_RS05625
subclass of: SO_0000673
so part of: DB313_RS05625
location: 5357..5737
location: region:5357-5737:1
so has part: feature:5357-5737:1:exon

WP_120104899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5357-5737:1:exon

DB313_RS05630
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
gene: tmk
locus tag: DB313_RS05630
old locus tag: DB313_05630
so part of: sequence
location: complement(5768..6469)
location: region:5768-6469:-1
so has part: feature:5768-6469:-1:exon
subclass of: SO_0000010

position:5768:-1
position: 5768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6469:-1
position: 6469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5768-6469:-1:exon

DB313_RS05630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
gene: tmk
locus tag: DB313_RS05630
old locus tag: DB313_05630
EC number: 2.7.4.9
inference: COORDINATES: protein motif:HMM:TIGR00041.1
GO function: GO:0004798 - thymidylate kinase activity [Evidence IEA]
GO process: GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTMP kinase
translation: MNRCRVLNNFYVLEGVDGVGKSSIISAIKSLCVGKFNYHFTREPTDSCIGTLIREELGRESPLFSNKTIEYLLFADREEHIYGKGGVASLLLKTPPCAGHKVICDRYLLSSVVYQGNPVSLLDSPFPLPEVIFLIDSSIKRIMNRLEEKRKSGRIDRVELDRDSIIKIRNRYVEVLNRIDFSHLHTKIVVLENNVLGDIESNARKILKAISNQVYLDDLVSKNKPLVGSCVDF
SIO_010081: DB313_RS05630
subclass of: SO_0000673
so part of: DB313_RS05630
location: complement(5768..6469)
location: region:5768-6469:-1
so has part: feature:5768-6469:-1:exon

WP_120104900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5768-6469:-1:exon

DB313_RS05635
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
gene: bdr
locus tag: DB313_RS05635
old locus tag: DB313_05635
so part of: sequence
location: complement(7233..7604)
location: region:7233-7604:-1
so has part: feature:7233-7604:-1:exon
subclass of: SO_0000010

position:7233:-1
position: 7233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7604:-1
position: 7604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7233-7604:-1:exon

DB313_RS05635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
gene: bdr
locus tag: DB313_RS05635
old locus tag: DB313_05635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012537756.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bdr family repetitive protein
translation: MIQPQSLNTENFNEHITQEVIYKEFVKLGMQEVIANDLSRRYYHNELTYKDLEYLGNKFDLKLEKLEDNLKNEMEINKKEMEINMMEIKSTLRLHNWMFGTIITLNLGLILTLIPILYTILKK
SIO_010081: DB313_RS05635
subclass of: SO_0000673
so part of: DB313_RS05635
location: complement(7233..7604)
location: region:7233-7604:-1
so has part: feature:7233-7604:-1:exon

WP_120104901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7233-7604:-1:exon

DB313_RS05640
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05640
old locus tag: DB313_05640
so part of: sequence
location: 8234..9601
location: region:8234-9601:1
so has part: feature:8234-9601:1:exon
subclass of: SO_0000010

position:8234:1
position: 8234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9601:1
position: 9601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8234-9601:1:exon

DB313_RS05640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05640
old locus tag: DB313_05640
inference: COORDINATES: protein motif:HMM:NF014468.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid maintenance protein
translation: MAKAIQSKYHSLVNECSNRKQTNLIILVSTLDFVNNRHKQYTQKYLYHCFTLSQKRFNKKVISQEAFRKYLYTLAKLEITDNYCHRKGKQKGSDIRYTLLHDKTECHKMINNHFKKEKENKFSKKFDAYCKSKNKRLAKKNTYDKNQCINNKNNNIRNIEKRRTHSLSKSSRESFTKKETEHTNEKRRYEKYANKCEFVSLNILNLISKLDTTDRNKINHLKNYKRIELECRKAPASELEAIIFPIIENNYKNPYYLCKFNDYGCFNRIVEYFNGDKSKFEVKKGTIYKKSTFKLKDFNDNRKDALQKLLDNKKYELIKEKYRQVDLDIEFAKLFNKYKTKPHFILEYKKYKDLSKFIEYVKKSYSKTETREEIDANNRCALFSIILDRATYRYPNTEDIRLKVKNYMASIEKIEVALFKDNTYLNEFMEKLKSEEFMYTNDKKKNTLKVANNVS
SIO_010081: DB313_RS05640
subclass of: SO_0000673
so part of: DB313_RS05640
location: 8234..9601
location: region:8234-9601:1
so has part: feature:8234-9601:1:exon

WP_161555035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8234-9601:1:exon

DB313_RS05645
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05645
old locus tag: DB313_05645
so part of: sequence
location: 9689..10498
location: region:9689-10498:1
so has part: feature:9689-10498:1:exon
subclass of: SO_0000010

position:9689:1
position: 9689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10498:1
position: 10498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9689-10498:1:exon

DB313_RS05645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05645
old locus tag: DB313_05645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014017693.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MDAKKVPKIISVASIKGGVGKSTTCLILAKLLAQKHRVLLIDMDTQASITSYYNKQLKEKDINVFYHNIHKVLNEQMLIDDSIVNIAPNIDIIPSYLSLQDFVEDFISNLVENYTIGNKEKMTYEDATLCLKNAMRFLPKEYDYILIDNPPSLDTILVNALLVSDYVIVPVVCELWTVESLALIKDKIRDRLKLNIPIYMMITKYKKRSTYEYLYNELAKRDDFLGTISERESLNRSVFSRIDFDIKYDYMNEYKSVLDNFMKRVESEF
SIO_010081: DB313_RS05645
subclass of: SO_0000673
so part of: DB313_RS05645
location: 9689..10498
location: region:9689-10498:1
so has part: feature:9689-10498:1:exon

WP_120104903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9689-10498:1:exon

DB313_RS05650
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05650
old locus tag: DB313_05650
so part of: sequence
location: 10599..11258
location: region:10599-11258:1
so has part: feature:10599-11258:1:exon
subclass of: SO_0000010

position:10599:1
position: 10599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11258:1
position: 11258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10599-11258:1:exon

DB313_RS05650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05650
old locus tag: DB313_05650
inference: COORDINATES: protein motif:HMM:NF033725.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosome replication/partitioning protein
translation: MKIDKNTEIIQNRIIDNSVYDERDKKKNRFNELVNKLKLLEKRDISNKIEAMKILAEIYDDGLYIIAGYRQFGAFAKTCFISGSRVYIFVRIGQKLREGVITEQDIINNGINYIREIIQKEDYKALREGENKTKSTPLRIMLPSDTAYSYFKSNTKFTSYALARIYDEHRQLLDNLFYEYNQEKKQRRIHDTEDIIEAEEEQQTVEEKKHKKVKVITSK
SIO_010081: DB313_RS05650
subclass of: SO_0000673
so part of: DB313_RS05650
location: 10599..11258
location: region:10599-11258:1
so has part: feature:10599-11258:1:exon

WP_120104904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10599-11258:1:exon

DB313_RS05655
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05655
old locus tag: DB313_05655
so part of: sequence
location: 11549..12031
location: region:11549-12031:1
so has part: feature:11549-12031:1:exon
subclass of: SO_0000010

position:11549:1
position: 11549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12031:1
position: 12031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11549-12031:1:exon

DB313_RS05655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05655
old locus tag: DB313_05655
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVNSTNNNRDNINLRGKLFNYVNDFYEFAENIDKGTYERMEVHITYAIGVFEELFEKHVKISENLDEAICIDFFDNYVATSLGKNTLYWMSEIFSEYALALIDICSSKSLSLEDRHKQMREVFVKFNDVVEEALEEEYLEDMGQYGLDDMIENSRNYYEY
SIO_010081: DB313_RS05655
subclass of: SO_0000673
so part of: DB313_RS05655
location: 11549..12031
location: region:11549-12031:1
so has part: feature:11549-12031:1:exon

WP_120104905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11549-12031:1:exon

DB313_RS05660
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05660
old locus tag: DB313_05660
so part of: sequence
location: 12045..13100
location: region:12045-13100:1
so has part: feature:12045-13100:1:exon
subclass of: SO_0000010

position:12045:1
position: 12045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13100:1
position: 13100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12045-13100:1:exon

DB313_RS05660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05660
old locus tag: DB313_05660
inference: COORDINATES: protein motif:HMM:NF016302.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ERF family protein
translation: MSSVVDSNMESEVSKPDALRELELFCELRKLKTYLKPIAKNGRCHIGKDKGYDYFHIDDILETIDSVINEHEINVAIWQEIKYEMLDGVKIDYIETMFVHTKNGYKHIIKTDLNMSETIEVYKLDMQYKSEYANVTKTERRQANNTIQQVMGSSFTYFCRYVLVKFFGITELLEDNDCNTGGNHTSKVVGSAIHADRQTQASSHKTYNNNDNGNGSGHNKKDLDTPEERQKLYNALDKLANREGASKLKFYVANKLISVVSGWYYAKGFKDKIEERITSFSKLEYKFKDKIEEIKRDREREKLIQEGAEKLMKGALEELDDSDLDGSDNYPYSYSSVRFGDELDNNYGVER
SIO_010081: DB313_RS05660
subclass of: SO_0000673
so part of: DB313_RS05660
location: 12045..13100
location: region:12045-13100:1
so has part: feature:12045-13100:1:exon

WP_161555036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12045-13100:1:exon

DB313_RS05665
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05665
old locus tag: DB313_05665
so part of: sequence
location: 13105..13476
location: region:13105-13476:1
so has part: feature:13105-13476:1:exon
subclass of: SO_0000010

position:13105:1
position: 13105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13476:1
position: 13476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13105-13476:1:exon

DB313_RS05665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05665
old locus tag: DB313_05665
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLVRTLDRIGRFVLYVLKGIRRMIWGVFCTLVGNERREIIKRLVFLWEMVEIQRKHHEKLRDEFIELSGNQVKALDDTYELAGEIERLKRQIKVLQRKAKGRENIRLSRTRRASRDIKGGVRQ
SIO_010081: DB313_RS05665
subclass of: SO_0000673
so part of: DB313_RS05665
location: 13105..13476
location: region:13105-13476:1
so has part: feature:13105-13476:1:exon

WP_120104907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13105-13476:1:exon

DB313_RS05670
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05670
old locus tag: DB313_05670
so part of: sequence
location: 13473..15416
location: region:13473-15416:1
so has part: feature:13473-15416:1:exon
subclass of: SO_0000010

position:13473:1
position: 13473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15416:1
position: 15416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13473-15416:1:exon

DB313_RS05670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05670
old locus tag: DB313_05670
inference: COORDINATES: protein motif:HMM:NF021128.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YqaJ viral recombinase family protein
translation: MRRLPRVCKGEFSKYSRSRSFDEQRREQTKLGASEIGSILLGQDDYLRAIAHKTGLIKFKTTEQMEKGKIMEGLSFALYERQYRCEITAIYPNKYKNGVDGYNYFKKYRGGESPIGSTIDGWLLKTDGTVELLELKYSENKKYPACIKDYNKYGNPLRYKYFLAIYAQAQAQIANTGVDTCNVHFTMSDGNKRCVIKRNQPFIDHMFSIAYRFLNELPLYKEIVGDIIASGCSEDEYIDALREALKSRGASLYGELDAPDYDYKKALLAYLPKQKVVVSEAEAGVLEDLLIQIDSLEKEASQIMDTVVKEKKDKARALQGILRDQFPFIDDSSMYEAGDIIFTFTSDRYTNIIDRLNIIGINPTVRVEEDSIKQQELETQPQNEYDYLFTQEELEALNAPLVEEEVGEFSTTTYPKVIRGIEEIREYLGDAEAEEIYDTNNNSYTDDANNDNHIDSSCKEYNMSFFDDIDYNNEYDKGNLLEEDDMNNIKDNPDKRRVEQVKSQIKTRIKESVAEGSVKFSSKDLYELAEGYGVLESYFDYLSPEDLYLILKYFPLMPNRDDDWGGDINFYIRVYLEVRDKYAEEIRLFRQAELEKQAQVRFRESEALRFTDRQSKVSFGANKDREENEFFGEGLDFTTHEQESQQI
SIO_010081: DB313_RS05670
subclass of: SO_0000673
so part of: DB313_RS05670
location: 13473..15416
location: region:13473-15416:1
so has part: feature:13473-15416:1:exon

WP_120104908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13473-15416:1:exon

DB313_RS05675
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05675
old locus tag: DB313_05675
so part of: sequence
location: complement(15521..16879)
location: region:15521-16879:-1
so has part: feature:15521-16879:-1:exon
subclass of: SO_0000010

position:15521:-1
position: 15521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16879:-1
position: 16879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15521-16879:-1:exon

DB313_RS05675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05675
old locus tag: DB313_05675
inference: COORDINATES: protein motif:HMM:TIGR01547.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PBSX family phage terminase large subunit
translation: MNLKLEKLLYLFPNKMASKYRRIFENIPAGSGSRHIDFGLFESNNLLPKQKEVLDSIRTHGHNKIILNGGIASGKTFLACYLFIKNLLENRAFYAKNVNNFIMGNSQNSIEVNILGEIETICDLLHIPYERKKQNTSFILIDSLRVNLYGGDKISDFKRLRGSNSALMFINEATTLSQEVIQEALKRLRIGSRTAIFDTNPDFPTHFFKTDYIDQTKIYKTYNFTTYDNATLASDFIREQEITYEHLPTYRARVLLGEWVASDCSIFHQIEFSDDYKFSAPICYIDPAFTVGGDNTAICILEKHKDKLYAYIYQDKRPVYDDDILYRIKTIIDGFNVRLLFIEDRDSVKGVGRLTQTLISLRGQCDNTLFKIVPVRPISNKFNRICSLIPIFNGKLLEFLKDIDKTVINDIYAYKGDSKTCDDALDSLANAYLLLMGSSKEKQTHFTKIKYY
SIO_010081: DB313_RS05675
subclass of: SO_0000673
so part of: DB313_RS05675
location: complement(15521..16879)
location: region:15521-16879:-1
so has part: feature:15521-16879:-1:exon

WP_152031121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15521-16879:-1:exon

DB313_RS05680
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05680
old locus tag: DB313_05680
so part of: sequence
location: complement(16900..17571)
location: region:16900-17571:-1
so has part: feature:16900-17571:-1:exon
subclass of: SO_0000010

position:16900:-1
position: 16900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17571:-1
position: 17571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16900-17571:-1:exon

DB313_RS05680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05680
old locus tag: DB313_05680
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKIYKGKYLKYYKPFIRGEISIGDIARIEKVSYSTVSKAMGKCRRALRATQDVILSNINSSKGSGSDCDSCLLNTNNIDHVLRCSSSDEDVDVLSSITTSTALKKLASVDTLKVEINRLISNLFFDEKYREVVIKEQVYNVLCADLARVEQALRNAYHSVEDRSKLLVEKEQLCEEIERYRLTFRETILLKRLAIEKQYYTSTLNDKEFKQIVKNYLYSDNL
SIO_010081: DB313_RS05680
subclass of: SO_0000673
so part of: DB313_RS05680
location: complement(16900..17571)
location: region:16900-17571:-1
so has part: feature:16900-17571:-1:exon

WP_120104910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16900-17571:-1:exon

DB313_RS05685
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05685
old locus tag: DB313_05685
so part of: sequence
location: complement(17648..18100)
location: region:17648-18100:-1
so has part: feature:17648-18100:-1:exon
subclass of: SO_0000010

position:17648:-1
position: 17648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18100:-1
position: 18100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17648-18100:-1:exon

DB313_RS05685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05685
old locus tag: DB313_05685
inference: COORDINATES: protein motif:HMM:NF015173.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF261 family protein
translation: MFNQITRITQYNTKLNPNIRRLGGYYLSLLFYVNYFTKTIDFKVKNVNEYYYLFVKKGYLDKSSLPKSPCLILEYFGFIRPHYRYERVLNPVSENEFTIYEVYITSLDTVHHIARKGKLTLYDSRDMASRKIKSRNVSKRVFSYLSINAF
SIO_010081: DB313_RS05685
subclass of: SO_0000673
so part of: DB313_RS05685
location: complement(17648..18100)
location: region:17648-18100:-1
so has part: feature:17648-18100:-1:exon

WP_161555037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17648-18100:-1:exon

DB313_RS05690
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05690
old locus tag: DB313_05690
so part of: sequence
location: complement(18093..18644)
location: region:18093-18644:-1
so has part: feature:18093-18644:-1:exon
subclass of: SO_0000010

position:18093:-1
position: 18093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18644:-1
position: 18644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18093-18644:-1:exon

DB313_RS05690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05690
old locus tag: DB313_05690
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLATQKNLFYSTYTQACLLKQGKNLSLQDIAIDFIKGLPNLIKLMYLKERVEFLASLSEPVVYEFTCLNQEKVREVLNLANKYGDTRYDLFFTPNDAILLFNECFDLLSRKISPKTYSLFTNTLGILEIRNDDLIVGNNFNKISFINTIKEIVHEEILSKETLIKVLVALRNYYKQYKTDEHV
SIO_010081: DB313_RS05690
subclass of: SO_0000673
so part of: DB313_RS05690
location: complement(18093..18644)
location: region:18093-18644:-1
so has part: feature:18093-18644:-1:exon

WP_120104912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18093-18644:-1:exon

DB313_RS05695
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05695
old locus tag: DB313_05695
so part of: sequence
location: complement(18656..18859)
location: region:18656-18859:-1
so has part: feature:18656-18859:-1:exon
subclass of: SO_0000010

position:18656:-1
position: 18656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18859:-1
position: 18859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18656-18859:-1:exon

DB313_RS05695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05695
old locus tag: DB313_05695
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVDLVTLLGLFLSFLSLIFCLLILSLNIRKILLKVDKKHRQQKEYLKRLKEFEYLVKGSTKNTINSK
SIO_010081: DB313_RS05695
subclass of: SO_0000673
so part of: DB313_RS05695
location: complement(18656..18859)
location: region:18656-18859:-1
so has part: feature:18656-18859:-1:exon

WP_120104913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18656-18859:-1:exon

DB313_RS05700
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05700
old locus tag: DB313_05700
so part of: sequence
location: complement(19037..19930)
location: region:19037-19930:-1
so has part: feature:19037-19930:-1:exon
subclass of: SO_0000010

position:19037:-1
position: 19037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19930:-1
position: 19930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19037-19930:-1:exon

DB313_RS05700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05700
old locus tag: DB313_05700
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKFNLYFLIPLFLLFIRCLSLELFQANPKPIEENYKINNTLTIEDLTQEEYDYYLQRYGEEKNIKKYYLSDFAEEYSYNLYSIDMYLLNPGMVIRIPVNREIVFKEFQQHGFILLKQNFYSHIDHVPLFKIIKADEYNKMFKLAQSIEKKQKKKNEEYEKLEKLNGLIKNNPFSLITLKDHFINGKIKENDIIYIEGYFDKLKASRLILKNLIKNKSSFVGYSFDKFTEFEVTNHDSNNIKNIMNKLQQNTEYLIKAKYLPKDEEMKQYVLNIEIIEIYGPDSNGYLELLKNNNFLS
SIO_010081: DB313_RS05700
subclass of: SO_0000673
so part of: DB313_RS05700
location: complement(19037..19930)
location: region:19037-19930:-1
so has part: feature:19037-19930:-1:exon

WP_120104914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19037-19930:-1:exon

DB313_RS05705
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05705
old locus tag: DB313_05705
so part of: sequence
location: 20521..21465
location: region:20521-21465:1
so has part: feature:20521-21465:1:exon
subclass of: SO_0000010

position:20521:1
position: 20521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21465:1
position: 21465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20521-21465:1:exon

DB313_RS05705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05705
old locus tag: DB313_05705
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MSRKTLLSTDKKVPNPSNIIYSNLNNPDVFINSLATAYKNKQIDNEYIFTLSNLLNRDTYAKLLNLILDKDNPVLINENNNAGEQKKRAITKYRKKNIRKKTNFYMSITKEQILKILELSYEQDKIMGMFYYLQYMTGSRCSEIANIKMQDIRKVAVDGEYMYRINIHVAKKRGETVIRPVLVSLLDFDKIQDAHREYAQANIKNRISLHNYNYLKRTYLFQKTKYKSLSTDNMGFFLRQIIQKVTRKKHIGKCSHIFRHYRIFLMKNSNVPSYDIKEEFHFSNISMVDRYGKPLIDKKKDYEFMINEKPSFAK
SIO_010081: DB313_RS05705
subclass of: SO_0000673
so part of: DB313_RS05705
location: 20521..21465
location: region:20521-21465:1
so has part: feature:20521-21465:1:exon

WP_120104915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20521-21465:1:exon

DB313_RS05710
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05710
old locus tag: DB313_05710
so part of: sequence
location: 21518..21700
location: region:21518-21700:1
so has part: feature:21518-21700:1:exon
subclass of: SO_0000010

position:21518:1
position: 21518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21700:1
position: 21700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21518-21700:1:exon

DB313_RS05710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05710
old locus tag: DB313_05710
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHADKEQTDKFNNTVSQDTQDQKNEVQPSLLSSSEHNTSQETRKRRLRTKKDYEIKHFYD
SIO_010081: DB313_RS05710
subclass of: SO_0000673
so part of: DB313_RS05710
location: 21518..21700
location: region:21518-21700:1
so has part: feature:21518-21700:1:exon

WP_120104916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21518-21700:1:exon

DB313_RS05715
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
gene: bdr
locus tag: DB313_RS05715
old locus tag: DB313_05715
so part of: sequence
location: 21791..22462
location: region:21791-22462:1
so has part: feature:21791-22462:1:exon
subclass of: SO_0000010

position:21791:1
position: 21791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22462:1
position: 22462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21791-22462:1:exon

DB313_RS05715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
gene: bdr
locus tag: DB313_RS05715
old locus tag: DB313_05715
inference: COORDINATES: protein motif:HMM:NF019415.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bdr family repetitive protein
translation: MQATQEQADYTRYHITEQQVYEELIRMGMDKPIAIQFANKYFYNELTQRDLENLEKNFNVRLKAIEDRIMGVENRISELKDDIKSLDTKIDSVRNELKDDIKSLDTKIDNVRNELKDDIKNVKDELNNKIDSVRNELKDDYKSLDTKIDSVRNELKDDIKNVKDDIKNVKEDLNHKIDSVKNELSVKIDSLEKNNKWIFGLTFTIWLTTLGGFIALFIAMYTK
SIO_010081: DB313_RS05715
subclass of: SO_0000673
so part of: DB313_RS05715
location: 21791..22462
location: region:21791-22462:1
so has part: feature:21791-22462:1:exon

WP_120104917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21791-22462:1:exon

DB313_RS05720
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05720
old locus tag: DB313_05720
so part of: sequence
location: 22613..23893
location: region:22613-23893:1
so has part: feature:22613-23893:1:exon
subclass of: SO_0000010

position:22613:1
position: 22613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23893:1
position: 23893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22613-23893:1:exon

DB313_RS05720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05720
old locus tag: DB313_05720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010257705.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1073 domain-containing protein
translation: MDEKASYNREGQGSIERARQNASRLYEYSIFFRNYIESTPEDALKNGIALNFLDEGGQVDSKARILLLKNLKVKLKEALRQAMISHRFYGFGYILIQTNGIDDDLKRGVNKDTPTGFVFLEPRKIVDNNPKLDKPYIEYVRNVYEESGDRRGRDSNIQIHKSRLIMYLNYDIILDKFVPVYSQGLITGFELFEDIYRQISKRIGNFNFLHYKDETLVDLMNTIEEIRVEATKLRQGNKENHFLNFLNSASNNRLINNRIHSLEHTSEALERELGKLKNKLHNEGIFYTSNENASLEIVKYDLAFLKDAFELVKAKIGADTKEPLTRSFNEQVKGLGSDGKGDRTNYYDYLKGVQEAVEIAVNSKLNTHYNLDMKFNDIEVLNTEERIAQETLFIDAYTKYLNLEADPRVSAKQAEYIKSNLPILGK
SIO_010081: DB313_RS05720
subclass of: SO_0000673
so part of: DB313_RS05720
location: 22613..23893
location: region:22613-23893:1
so has part: feature:22613-23893:1:exon

WP_120104918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22613-23893:1:exon

DB313_RS05725
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05725
old locus tag: DB313_05725
so part of: sequence
location: 23918..24634
location: region:23918-24634:1
so has part: feature:23918-24634:1:exon
subclass of: SO_0000010

position:23918:1
position: 23918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24634:1
position: 24634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23918-24634:1:exon

DB313_RS05725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05725
old locus tag: DB313_05725
inference: COORDINATES: protein motif:HMM:NF018761.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1357 family protein
translation: MVDTVPTTQASSKETAHLDDDKTTSNLVASDTQASITREEYQGLMDTLREFKQQLVASKEGQTNFYKKPSIDEQVAREIASNERRELTQKELADKAKFISEVSKLAEENLASHFNTEKLELQGYHTDEIVDAQIKALVKKYVPQETIIAIAGTSDLEKVKKGSELLGQLFRVAKAHIRDRQNRYNSQRALNSILTRSENSEFKSFSNDGANLLAEDDFKYANLNYWKQRRENREKQVS
SIO_010081: DB313_RS05725
subclass of: SO_0000673
so part of: DB313_RS05725
location: 23918..24634
location: region:23918-24634:1
so has part: feature:23918-24634:1:exon

WP_120104919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23918-24634:1:exon

DB313_RS05730
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05730
old locus tag: DB313_05730
so part of: sequence
location: 24661..25284
location: region:24661-25284:1
so has part: feature:24661-25284:1:exon
subclass of: SO_0000010

position:24661:1
position: 24661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25284:1
position: 25284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24661-25284:1:exon

DB313_RS05730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05730
old locus tag: DB313_05730
inference: COORDINATES: protein motif:HMM:NF014983.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF228 domain-containing protein
translation: MSTDTTELQKQIQKLQQEKSSLEAQLQQEKAKTTSKQQDAISLLQSKGEREIRPTTNLENDFVNQNKQFASYASTRVDPKTRIEALPYKGFCHKMGVKLVYDTEYEKQVEAGGGDELYGVCINVDEYLKVAHVVRTVCQGHFVCANGSIKAGDKLTFSDKGILEKAVKNRHTYAHATAVKDSFEFSDKKGIYGVEVDFNGFVAPKVN
SIO_010081: DB313_RS05730
subclass of: SO_0000673
so part of: DB313_RS05730
location: 24661..25284
location: region:24661-25284:1
so has part: feature:24661-25284:1:exon

WP_120104920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24661-25284:1:exon

DB313_RS05735
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05735
old locus tag: DB313_05735
so part of: sequence
location: 25316..26278
location: region:25316-26278:1
so has part: feature:25316-26278:1:exon
subclass of: SO_0000010

position:25316:1
position: 25316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26278:1
position: 26278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25316-26278:1:exon

DB313_RS05735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05735
old locus tag: DB313_05735
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSYLDDNYYARKVAEVLEEGFVDEPEFYKWFTPNQIINTDITSGHFQTTKWEAFVEDTPTAVSNGTNVVSNIQFRSITTQTSFLRLQYAFNHLRRGAEDKYTRNGYIGDPSINILPFKEAYIKAHKLIDKIRTAFFLLGYISVDKDGKHKKILLNDIKGKPNMFGLINTPNQITKSVDKSNINSPEKIIEVFKAGLAEMNLEEYAYAPIMVLMDNQTSLKLNTYDKNGSKAKYKTMLLDDLASINNGNPTQIRTTPLLKDKIIIFPHKPELLLINEGLPPIINEFVEKRSNDMETSYIDFVIGSTMAHDKTMLVLNIGDA
SIO_010081: DB313_RS05735
subclass of: SO_0000673
so part of: DB313_RS05735
location: 25316..26278
location: region:25316-26278:1
so has part: feature:25316-26278:1:exon

WP_120104921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25316-26278:1:exon

DB313_RS05740
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05740
old locus tag: DB313_05740
so part of: sequence
location: 26281..26685
location: region:26281-26685:1
so has part: feature:26281-26685:1:exon
subclass of: SO_0000010

position:26281:1
position: 26281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26685:1
position: 26685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26281-26685:1:exon

DB313_RS05740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05740
old locus tag: DB313_05740
inference: COORDINATES: protein motif:HMM:NF024429.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3890 domain-containing protein
translation: MSATTNSIDEIHRRILELLSLNAEILSIENLKTYIHLLEDILLAKRVEPTLLSSNESFLLVYYFVACQLIKKGTLTSFTFNRIKSEKLGELAVEYSDPARNKEIDSKDFCNEFNELLDDLTKRGYKRVKPLGVI
SIO_010081: DB313_RS05740
subclass of: SO_0000673
so part of: DB313_RS05740
location: 26281..26685
location: region:26281-26685:1
so has part: feature:26281-26685:1:exon

WP_120104922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26281-26685:1:exon

DB313_RS05745
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05745
old locus tag: DB313_05745
so part of: sequence
location: 26685..27068
location: region:26685-27068:1
so has part: feature:26685-27068:1:exon
subclass of: SO_0000010

position:27068:1
position: 27068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26685-27068:1:exon

DB313_RS05745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05745
old locus tag: DB313_05745
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DUF1506 family protein
translation: MSLSLTRLSASTSRVINHFKQELLLYKRSVSQNDAYKTVEQAYAQNPVNFTGSISSLSVVELDNLLSIGGQDPTSYLKVYTADLSIDIKRGDRISINGCFYLVDSIRMHKRIGISLLEMVIKEEVWE
SIO_010081: DB313_RS05745
subclass of: SO_0000673
so part of: DB313_RS05745
location: 26685..27068
location: region:26685-27068:1
so has part: feature:26685-27068:1:exon

WP_120104923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26685-27068:1:exon

DB313_RS05750
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05750
old locus tag: DB313_05750
so part of: sequence
location: 27059..27475
location: region:27059-27475:1
so has part: feature:27059-27475:1:exon
subclass of: SO_0000010

position:27059:1
position: 27059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27475:1
position: 27475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27059-27475:1:exon

DB313_RS05750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05750
old locus tag: DB313_05750
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGIKTTYKEYGIEIGWFSSEIASIAKFHELGTSNLVRRSHLYKVFNLQEFREVTNTLIKDAIVNKKSISSALEKIAIIFIALYKDFVLSQGVTPKLLDRTIKAKRRKGSSTPDTPLVDTGRMINSIEYRHITREDSTC
SIO_010081: DB313_RS05750
subclass of: SO_0000673
so part of: DB313_RS05750
location: 27059..27475
location: region:27059-27475:1
so has part: feature:27059-27475:1:exon

WP_120104924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27059-27475:1:exon

DB313_RS05755
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05755
old locus tag: DB313_05755
so part of: sequence
location: 27469..28035
location: region:27469-28035:1
so has part: feature:27469-28035:1:exon
subclass of: SO_0000010

position:27469:1
position: 27469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28035:1
position: 28035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27469-28035:1:exon

DB313_RS05755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05755
old locus tag: DB313_05755
inference: COORDINATES: protein motif:HMM:NF017382.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF764 family protein
translation: MLIDLHETQVYVLKILEMFAVALKKKQGISIELINIINHPYLEDINTNSSDVVAIKVIDYGRLGNRELRSGGFYDSVNEYELMISLYFICFITKENAVNQIDLLNRMTLIYQEYNSFLHNNSNIFKFSKAVDKEYVLRLKYILRHIGRFALKDPITVKSKYSNKAISTNIITKVNVQVIEEKITSTQK
SIO_010081: DB313_RS05755
subclass of: SO_0000673
so part of: DB313_RS05755
location: 27469..28035
location: region:27469-28035:1
so has part: feature:27469-28035:1:exon

WP_120104925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27469-28035:1:exon

DB313_RS05760
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05760
old locus tag: DB313_05760
so part of: sequence
location: 28050..29156
location: region:28050-29156:1
so has part: feature:28050-29156:1:exon
subclass of: SO_0000010

position:28050:1
position: 28050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29156:1
position: 29156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28050-29156:1:exon

DB313_RS05760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05760
old locus tag: DB313_05760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014023228.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF787 family protein
translation: MPQDTIKVNLVDNALQMNVINYYRPLLIFKSEVLDGVALMLTSQAYEDDILNLKMISSISSDQSKQQTAKNERGLLTRAVKDYFDEGGFKSLDILLFKDIKEVKAYLKVNLHPFVCFVNPCEDKNTTDITSLVNPNNFIVFSKTSRDLPTALKSKKGRQLENLILFYNKETTNKEGASEYDNTHIKFISQYLHQASMFHATNPYGIRIKAEPIITDTELISSLRGSNINFYTLLNETGYDGILAIKEGVDLAGRPIDEIATYAYIKNKATEELIRIWNANNRSNSKLSTIQLEGASPNVYTSALEVLFKRFKDNGLIFSFSDIKFKIEPIDNALRMSLSVMIQYNHSLNTVELKITAEDINAIFKGDK
SIO_010081: DB313_RS05760
subclass of: SO_0000673
so part of: DB313_RS05760
location: 28050..29156
location: region:28050-29156:1
so has part: feature:28050-29156:1:exon

WP_120104926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28050-29156:1:exon

DB313_RS05765
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05765
old locus tag: DB313_05765
so part of: sequence
location: 29157..29594
location: region:29157-29594:1
so has part: feature:29157-29594:1:exon
subclass of: SO_0000010

position:29157:1
position: 29157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29594:1
position: 29594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29157-29594:1:exon

DB313_RS05765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05765
old locus tag: DB313_05765
inference: COORDINATES: protein motif:HMM:NF018966.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1463 family protein
translation: MAYDGHTSFQNFKDSVFIFNEHEFKHGRIKISKGKNEIAKTSNLGDMAFFLKQEANFYIIELEVSKNSYDYKKLMAFYHAQENGDQRPEDNYKPLTFLDKEGGVKITTEHAFFTSYNELSYNPEEPAEVTFTLNAIKCTTEFIDK
SIO_010081: DB313_RS05765
subclass of: SO_0000673
so part of: DB313_RS05765
location: 29157..29594
location: region:29157-29594:1
so has part: feature:29157-29594:1:exon

WP_120104927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29157-29594:1:exon

DB313_RS05770
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05770
old locus tag: DB313_05770
so part of: sequence
location: 29608..30075
location: region:29608-30075:1
so has part: feature:29608-30075:1:exon
subclass of: SO_0000010

position:29608:1
position: 29608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30075:1
position: 30075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29608-30075:1:exon

DB313_RS05770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05770
old locus tag: DB313_05770
inference: COORDINATES: protein motif:HMM:NF018989.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1473 family protein
translation: MRYSLVILTKSGDIKFELKTMSMYEWDMLLGFDNTLDTLRDMNKFELVLNHMICSFQHDLYDSFFKYLYGEILDKDRKFAEIYKTDLFLLIYKLHYDIFENSQTERLPKLVYIEGFFDSKLNLNKYDYINEDWNYSYVANLMNMNTLGNLNEQSK
SIO_010081: DB313_RS05770
subclass of: SO_0000673
so part of: DB313_RS05770
location: 29608..30075
location: region:29608-30075:1
so has part: feature:29608-30075:1:exon

WP_120104928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29608-30075:1:exon

DB313_RS05775
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05775
old locus tag: DB313_05775
so part of: sequence
location: 30059..30301
location: region:30059-30301:1
so has part: feature:30059-30301:1:exon
subclass of: SO_0000010

position:30059:1
position: 30059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30301:1
position: 30301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30059-30301:1:exon

DB313_RS05775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05775
old locus tag: DB313_05775
inference: COORDINATES: protein motif:HMM:NF018705.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1322 family protein
translation: MSSQNKNSSFLHIYHKYKQFIDKELKSKDNQYILPLILGICNDLEQIKQLDGKDFRLIRKACLLKLEYEEWNLILNKIPF
SIO_010081: DB313_RS05775
subclass of: SO_0000673
so part of: DB313_RS05775
location: 30059..30301
location: region:30059-30301:1
so has part: feature:30059-30301:1:exon

WP_120104929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30059-30301:1:exon

DB313_RS05780
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05780
old locus tag: DB313_05780
so part of: sequence
location: 30324..32426
location: region:30324-32426:1
so has part: feature:30324-32426:1:exon
subclass of: SO_0000010

position:30324:1
position: 30324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32426:1
position: 32426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30324-32426:1:exon

DB313_RS05780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05780
old locus tag: DB313_05780
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPEDDNKDKFTIPITVNIGANTDSAHKQIIEDINEIETDARIGIDSAYFKNRLDELKKNFKTKSIADLRVGINTKSNQINLVKRNLIEEKEAIKQAYAFKKASFKEELKQLESTPTTAETKVHAKSLKSSLKEIEVEEKSKLKEADERANTQVNRLKADRDIESQFFKERMTQEQDNLRGQKQAQRFKDREENRIRREEEKRIKKTFQETSRLMRSGLSYEQAREEGEKRARQTEGEYYKKRLKQLKENGIATSEFSKAIAKLKKNTSFLTQTMANITGNLISNMASFITSGLKDGFSATKNRDMSKAHAHIKRGGRNFDALRELYKANPNKMPKLTQGESINFEIIKQMNQRGIDFNSEAEIIAGSLNLENMYALRGGNTTNATLKGIELALSLVETQYANIGEAFNIVESLGRGELSGLYGIARKLGAKGGRYTELGLQDRERKYATSQKGTTLIEEDLALVMQLLKGKIANTEGVKEKLDLHKNISKASYFTAEKQAQASDFIAHKTGATIKATSNWYEANQIQKEKLKENLSFKEYRKQELKKKKHIYDKIKPLGNYSTTQEYIPDFIDNSVEKKGDDYYVKSHSKGYMGGVEKRKLNKAEVDAYLKFKGDDDIIHSQWQKAREQGQTPEDILQNGMTKSSSKDISHINTEGINKSLASTTTAISNFTNAVSNATQQLNTRFPLSKTTLKDSIGRS
SIO_010081: DB313_RS05780
subclass of: SO_0000673
so part of: DB313_RS05780
location: 30324..32426
location: region:30324-32426:1
so has part: feature:30324-32426:1:exon

WP_120104930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30324-32426:1:exon

DB313_RS05785
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05785
old locus tag: DB313_05785
so part of: sequence
location: 32442..33140
location: region:32442-33140:1
so has part: feature:32442-33140:1:exon
subclass of: SO_0000010

position:32442:1
position: 32442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33140:1
position: 33140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32442-33140:1:exon

DB313_RS05785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05785
old locus tag: DB313_05785
inference: COORDINATES: protein motif:HMM:NF017448.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF792 family protein
translation: MSFDFFKKVTNPDKFLDIIKDAKWGADDTENAKLKLEREKAYTFIKANSKLILEICNQIILLFGRGSNWMALYPRLDFYGLGFIPQLFLISATNEYMEISTGQDGSSYPVINPVTRNLQNASYNIYGKPYTITLNEGILTSFYEKIIFDESLKRIPALNAILRETKSLVRKQLEERVKAGVPFSFFSPLTGYIPYTKIPRLVSRPTEYEGTYNVSISIEEIEVGYLEDFEFE
SIO_010081: DB313_RS05785
subclass of: SO_0000673
so part of: DB313_RS05785
location: 32442..33140
location: region:32442-33140:1
so has part: feature:32442-33140:1:exon

WP_120104931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32442-33140:1:exon