Borrelia turcica IST7 plasmid lp32-B, complete sequence.
type: Entry
definition: Borrelia turcica IST7 plasmid lp32-B, complete sequence.
sequence version: NZ_CP028887.1
sequence date: 2023-02-24
sequence: sequence
division: CON
label: NZ_CP028887.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN08918700
keyword: RefSeq
source: Borrelia turcica IST7
organism: Borrelia turcica IST7
taxonomy: Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Borreliaceae; Borrelia.
reference: 1
references: 30240834
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP028887.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. v2.3.0; other v. 9.5.3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 48.0x\nSequencing Technology :: PacBio; Illumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/23/2023 23:20:26\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,277\nCDSs (total) :: 1,240\nGenes (coding) :: 1,232\nCDSs (with protein) :: 1,232\nGenes (RNA) :: 37\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 31\nncRNAs :: 3\nPseudo Genes (total) :: 8\nCDSs (without protein) :: 8\nPseudo Genes (ambiguous residues) :: 0 of 8\nPseudo Genes (frameshifted) :: 5 of 8\nPseudo Genes (incomplete) :: 3 of 8\nPseudo Genes (internal stop) :: 2 of 8\nPseudo Genes (multiple problems) :: 2 of 8\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 32353
topology: linear
so has quality: SO_0000987
location: 1..32353
location: region:1-32353:1
RO_0002162: 1104446

NZ_CP028887
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN08918700
type: BioSample
SIO_000068: biosample

1
title: Genome-wide analysis of Borrelia turcica and 'Candidatus Borrelia tachyglossi' shows relapsing fever-like genomes with unique genomic links to Lyme disease Borrelia
author: Gofton, A.W.
author: Margos, G.
author: Fingerle, V.
author: Hepner, S.
author: Loh, S.M.
author: Ryan, U.
author: Irwin, P.
author: Oskam, C.L.
journal: Infect Genet Evol 66, 72-81 (2018)
pubmed: 30240834

30240834
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Margos, G.
journal: Submitted (12-APR-2018) German National Reference Centre for Borrelia, Bavarian Health and Food Safety Authority, Veterinarstrasse 2, Oberschleissheim 85764, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32353:1
position: 32353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-32353:1:source
so part of: sequence
organism: Borrelia turcica IST7
mol type: genomic DNA
strain: IST7
isolation source: Hyalomma aegyptium
host: tortoise
type material: type strain of Borrelia turcica
plasmid: lp32-B
country: Turkey
collection date: 2000
collected by: Yeditepe University, Istanbul, Turkey
genotype: ST793

1104446
type: Taxonomy
SIO_000068: taxonomy

DB313_RS05390
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05390
old locus tag: DB313_05395
so part of: sequence
location: 316..963
location: region:316-963:1
so has part: feature:316-963:1:exon
subclass of: SO_0000010

position:316:1
position: 316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963:1
position: 963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316-963:1:exon

DB313_RS05390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05390
old locus tag: DB313_05395
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTGIPLNHLNNKSILAFQKDNHSLFYKVDSNRLFRKYTLTDSSSIVKAIRFLARSHESIHARKINRIIKRIFNLNLTSKNIQDIYYLIFKDKIAITLLDNTFPCMDSFVYNTKLDNILLVNEPLLDLNKILAYINSFSHLKLNKSSLALFKNSTSHIEKSIAFLVEDFFNNNKYRYKNLHQLISFINSNLKQMGIDYKSTCKSQKKIFLRLFKS
SIO_010081: DB313_RS05390
subclass of: SO_0000673
so part of: DB313_RS05390
location: 316..963
location: region:316-963:1
so has part: feature:316-963:1:exon

WP_152031117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316-963:1:exon

DB313_RS05395
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05395
old locus tag: DB313_05400
so part of: sequence
location: complement(1324..2097)
location: region:1324-2097:-1
so has part: feature:1324-2097:-1:exon
subclass of: SO_0000010

position:1324:-1
position: 1324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2097:-1
position: 2097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1324-2097:-1:exon

DB313_RS05395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05395
old locus tag: DB313_05400
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: p23 cell envelope protein
translation: MRRPTLLILIIIMGCNLGKEDVDSVEEEDVVVAAVKTSSKVSREEGVSFEVVEGKTERCLDATHWAVSLFSKCRTCYINWIKTKPVEIRSWKGKVIKTLKGRLGYSISVTPVKYNNESSKYVMPLIMFESIDSGNSVEVISFVLTDYPKLNFNKRGGTFEIPRVEKSAEREGNNVYPFGILNALSPNGGEEIIGVIAGQHKGGSWESLKAKITVKIGGIVKAYRIGLDARVFNEFMKEVFTRYPEASSENRKFRIPV
SIO_010081: DB313_RS05395
subclass of: SO_0000673
so part of: DB313_RS05395
location: complement(1324..2097)
location: region:1324-2097:-1
so has part: feature:1324-2097:-1:exon

WP_120104856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1324-2097:-1:exon

DB313_RS05400
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05400
old locus tag: DB313_05405
so part of: sequence
location: 2258..2605
location: region:2258-2605:1
so has part: feature:2258-2605:1:exon
subclass of: SO_0000010

position:2258:1
position: 2258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2605:1
position: 2605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2258-2605:1:exon

DB313_RS05400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05400
old locus tag: DB313_05405
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKFSLLFLLALATSLALFASCSQDVADFADEMEEEEIELAEADEDDEDDDEEEGVEEVVEVADSSDTSSQTEVPKATSLGGAVKGLASAVFAPVTSILSGLSGFFSSSDNSSKK
SIO_010081: DB313_RS05400
subclass of: SO_0000673
so part of: DB313_RS05400
location: 2258..2605
location: region:2258-2605:1
so has part: feature:2258-2605:1:exon

WP_120104857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2258-2605:1:exon

DB313_RS05405
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05405
old locus tag: DB313_05410
so part of: sequence
location: complement(2710..3072)
location: region:2710-3072:-1
so has part: feature:2710-3072:-1:exon
subclass of: SO_0000010

position:2710:-1
position: 2710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3072:-1
position: 3072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2710-3072:-1:exon

DB313_RS05405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05405
old locus tag: DB313_05410
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQYNKFVLTNLFLSLFLSCTLNLGDDEKKIKAQYEEQERQLQQELYMTKEEALQHAELRRTQKPIRLHKFLLVTGDLRDNAKRAQDEAYGIIGKLEDLEKGITNKDNGSIKNDLEKYILN
SIO_010081: DB313_RS05405
subclass of: SO_0000673
so part of: DB313_RS05405
location: complement(2710..3072)
location: region:2710-3072:-1
so has part: feature:2710-3072:-1:exon

WP_120104858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2710-3072:-1:exon

DB313_RS05410
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05410
old locus tag: DB313_05415
so part of: sequence
location: 3172..3420
location: region:3172-3420:1
so has part: feature:3172-3420:1:exon
subclass of: SO_0000010

position:3172:1
position: 3172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3420:1
position: 3420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3172-3420:1:exon

DB313_RS05410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05410
old locus tag: DB313_05415
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGYKEDVQFDFQYENINKLKNNLELLCDIVRGYLGGNLSKITVDGLQKDAVTKAIDGVVLINKTLARIKIIAELVFLLYLTN
SIO_010081: DB313_RS05410
subclass of: SO_0000673
so part of: DB313_RS05410
location: 3172..3420
location: region:3172-3420:1
so has part: feature:3172-3420:1:exon

WP_120104859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3172-3420:1:exon

DB313_RS05415
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05415
old locus tag: DB313_05420
so part of: sequence
location: 4177..4431
location: region:4177-4431:1
so has part: feature:4177-4431:1:exon
subclass of: SO_0000010

position:4177:1
position: 4177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4431:1
position: 4431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4177-4431:1:exon

DB313_RS05415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05415
old locus tag: DB313_05420
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIRLIYGVIKANGRFMAYLDRIDPAGVFKSFIGFLLFGILYFTFCYLYTLPLYRHDKLLDEFFSAAKVNYARNLYEEYKESGLK
SIO_010081: DB313_RS05415
subclass of: SO_0000673
so part of: DB313_RS05415
location: 4177..4431
location: region:4177-4431:1
so has part: feature:4177-4431:1:exon

WP_120104860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4177-4431:1:exon

DB313_RS06525
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS06525
so part of: sequence
location: complement(5216..5851)
location: region:5216-5851:-1
so has part: feature:5216-5851:-1:exon
subclass of: SO_0000010

position:5216:-1
position: 5216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5851:-1
position: 5851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5216-5851:-1:exon

DB313_RS06525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS06525
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRFPLKYLARRATVRRDIFWNTYMSDEIQNKRGDANITNFPVLKPQDMNYDYIYEYVREWASKKYKEAGDIIIRKVDDREYICETKICFRFNKILETLYKDFKQVFLSRLVKRDAPKPQAKVPPQPQEVGEPVVGSIQDQPRQEQVRVAAGSPAPQPNSLGSDASLVGSTPKGKGKKVVPPEGEAASRDATPPEPKIPNKKNKQEANRRES
SIO_010081: DB313_RS06525
subclass of: SO_0000673
so part of: DB313_RS06525
location: complement(5216..5851)
location: region:5216-5851:-1
so has part: feature:5216-5851:-1:exon

WP_193927155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5216-5851:-1:exon

DB313_RS05425
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05425
old locus tag: DB313_05430
so part of: sequence
location: complement(5848..7416)
location: region:5848-7416:-1
so has part: feature:5848-7416:-1:exon
subclass of: SO_0000010

position:5848:-1
position: 5848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7416:-1
position: 7416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5848-7416:-1:exon

DB313_RS05425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05425
old locus tag: DB313_05430
inference: COORDINATES: protein motif:HMM:NF014468.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid maintenance protein
translation: MISKKDGKYNKKTYQNPQKVEKIRILNELVRENENKSRKSCSEITMYQVKSMIGKKLLRISRMRKIYWSINAKNREYKSDNMQYSAKDILAMSNDLLKRDNEKPVCSRTIQRDIKLMNKIELLKTETVRFGVGRGSLSFYIQNMELADKYRDIIHDEVIKLLKEELADKIIIGDLDKRIANVEFDKEKTRAILKEVEENKEKRKRDEAEIIKCKDIKSDEKDPHLFKPKNNYKYKKNSREMLTKERQKEKTGQKNGVEERLASQYSIENSYMMKLRENSNNKDTYENALCNLETALCEYTRDYKIEHITDHFMEQFLSRYKGKVWMMMRRVDGIISDYEVIWEGRFKDKYPHKYKENVMPIKSSRQVSKQRKTIKDKEEGRDTNVREQKRELRDNIFSILLAQLTITRKTSRSTIAPIIKKFIDKLGDRLSYKGIINNFYYYSLLDILDRKQNIGDSEPDMKIDTKIATKSESNEGRVGLAINLTTSEGFKTTKGLAIENLCRYENNYLENNTNREYTEVAR
SIO_010081: DB313_RS05425
subclass of: SO_0000673
so part of: DB313_RS05425
location: complement(5848..7416)
location: region:5848-7416:-1
so has part: feature:5848-7416:-1:exon

WP_120104861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5848-7416:-1:exon

DB313_RS06575
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS06575
so part of: sequence
location: complement(7514..7648)
location: region:7514-7648:-1
so has part: feature:7514-7648:-1:exon
subclass of: SO_0000010

position:7514:-1
position: 7514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7648:-1
position: 7648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7514-7648:-1:exon

DB313_RS06575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS06575
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIYNINIEKTQEMTKGLIRLSSKTIYKKRQSNLASSQTGTFCI
SIO_010081: DB313_RS06575
subclass of: SO_0000673
so part of: DB313_RS06575
location: complement(7514..7648)
location: region:7514-7648:-1
so has part: feature:7514-7648:-1:exon

WP_274542545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7514-7648:-1:exon

DB313_RS05430
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05430
old locus tag: DB313_05435
so part of: sequence
location: complement(7863..8072)
location: region:7863-8072:-1
so has part: feature:7863-8072:-1:exon
subclass of: SO_0000010

position:7863:-1
position: 7863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8072:-1
position: 8072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7863-8072:-1:exon

DB313_RS05430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05430
old locus tag: DB313_05435
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRKAEKMEESRKRKDTLKDEIKRIGEESIDFFSVMKKEIDELKRSHIPADEGNKTNENDKEKKVKKTK
SIO_010081: DB313_RS05430
subclass of: SO_0000673
so part of: DB313_RS05430
location: complement(7863..8072)
location: region:7863-8072:-1
so has part: feature:7863-8072:-1:exon

WP_120104862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7863-8072:-1:exon

DB313_RS05440
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05440
old locus tag: DB313_05445
so part of: sequence
location: 9356..9589
location: region:9356-9589:1
so has part: feature:9356-9589:1:exon
subclass of: SO_0000010

position:9356:1
position: 9356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9589:1
position: 9589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9356-9589:1:exon

DB313_RS05440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05440
old locus tag: DB313_05445
inference: COORDINATES: protein motif:HMM:NF016969.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF693 family protein
translation: METGNKNGDLLLITPYILFLKVTFTIENLQKNKDNKEEIIYLNLQGKTVSEAIKEVFGNKAILNMENIDKNKEIQET
SIO_010081: DB313_RS05440
subclass of: SO_0000673
so part of: DB313_RS05440
location: 9356..9589
location: region:9356-9589:1
so has part: feature:9356-9589:1:exon

WP_120104864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9356-9589:1:exon

DB313_RS06385
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS06385
so part of: sequence
location: 9899..10114
location: region:9899-10114:1
so has part: feature:9899-10114:1:exon
subclass of: SO_0000010

position:9899:1
position: 9899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10114:1
position: 10114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9899-10114:1:exon

DB313_RS06385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS06385
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHNEYKIYDDKTRGPSQETQVTQNSETKQGNKNKLRVVTKKPPIKSPPIKKPVNKGITSNKRIHNQELEIS
SIO_010081: DB313_RS06385
subclass of: SO_0000673
so part of: DB313_RS06385
location: 9899..10114
location: region:9899-10114:1
so has part: feature:9899-10114:1:exon

WP_152031118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9899-10114:1:exon

DB313_RS05455
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05455
old locus tag: DB313_05460
so part of: sequence
location: 10153..10377
location: region:10153-10377:1
so has part: feature:10153-10377:1:exon
subclass of: SO_0000010

position:10153:1
position: 10153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10377:1
position: 10377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10153-10377:1:exon

DB313_RS05455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05455
old locus tag: DB313_05460
inference: COORDINATES: protein motif:HMM:NF017423.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF777 family protein
translation: MNQTIFICRIGIIKKFEYESQEGNVLSPEFAGLEIKTFSISNIRLDLREGRGVILLQSNYNIFNEYDDNNFDKG
SIO_010081: DB313_RS05455
subclass of: SO_0000673
so part of: DB313_RS05455
location: 10153..10377
location: region:10153-10377:1
so has part: feature:10153-10377:1:exon

WP_238614543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10153-10377:1:exon

DB313_RS05460
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05460
old locus tag: DB313_05465
so part of: sequence
location: 10942..11346
location: region:10942-11346:1
so has part: feature:10942-11346:1:exon
subclass of: SO_0000010

position:10942:1
position: 10942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11346:1
position: 11346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10942-11346:1:exon

DB313_RS05460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05460
old locus tag: DB313_05465
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: phage integrase family protein
translation: MLVSLLDFDKIQDAHREYAQANIKNRISLHNYNYLKRTYLFQKTKYKSLSTNNMSFFLRQIIQKVTRKKHIGKCSHIFRHYRIFLMKNSNVPSYDIKEEFHFSNISMVDRYGKPLIDKKKDYEFMINEKPSFAK
SIO_010081: DB313_RS05460
subclass of: SO_0000673
so part of: DB313_RS05460
location: 10942..11346
location: region:10942-11346:1
so has part: feature:10942-11346:1:exon

WP_161555029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10942-11346:1:exon

DB313_RS05465
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05465
old locus tag: DB313_05470
so part of: sequence
location: 11399..11587
location: region:11399-11587:1
so has part: feature:11399-11587:1:exon
subclass of: SO_0000010

position:11399:1
position: 11399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11587:1
position: 11587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11399-11587:1:exon

DB313_RS05465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05465
old locus tag: DB313_05470
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHTNKEQTDKFNNILNQDTQYQNKKSKAQPSLLSSSEHNTSQETRKRRLRTKKDYEIKHFYD
SIO_010081: DB313_RS05465
subclass of: SO_0000673
so part of: DB313_RS05465
location: 11399..11587
location: region:11399-11587:1
so has part: feature:11399-11587:1:exon

WP_120104868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11399-11587:1:exon

DB313_RS05470
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05470
old locus tag: DB313_05475
so part of: sequence
location: 11621..12205
location: region:11621-12205:1
so has part: feature:11621-12205:1:exon
subclass of: SO_0000010

position:11621:1
position: 11621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12205:1
position: 12205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11621-12205:1:exon

DB313_RS05470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05470
old locus tag: DB313_05475
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKFLINLFICLLFIGCVPLDSNTEDSKDNKEEVKEKTQDNKSSSEVKQQVVVSNPLSTDDKGVLDYLKTQLLASINSKGVVDEKKGQYISKLNGFFKWLNENPDKGRELAKVGKDLQDLIKSKSNGTLENLENVKRKSNDSQNLKEQVKQVFDMAYNTFGDIYETNEKALEDLKNTLSDNNNHLDGIKIFVPKR
SIO_010081: DB313_RS05470
subclass of: SO_0000673
so part of: DB313_RS05470
location: 11621..12205
location: region:11621-12205:1
so has part: feature:11621-12205:1:exon

WP_120104869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11621-12205:1:exon

DB313_RS05475
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
gene: bdr
locus tag: DB313_RS05475
old locus tag: DB313_05480
so part of: sequence
location: 12309..12740
location: region:12309-12740:1
so has part: feature:12309-12740:1:exon
subclass of: SO_0000010

position:12309:1
position: 12309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12740:1
position: 12740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12309-12740:1:exon

DB313_RS05475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
gene: bdr
locus tag: DB313_RS05475
old locus tag: DB313_05480
inference: COORDINATES: protein motif:HMM:NF040499.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bdr family repetitive protein
translation: MQVTQEQADYTRYHITEQQVYEELIRMGMDKPIAIQFANKYFYNELTQRDLENLEKNFNVRLKALEDRIMGVENRISELKDDIKSLDTKIDNVKNELKDDIKNVKNELSVKIDSLEKNNKWIFGLTFTIWLTTLGGFIALFLK
SIO_010081: DB313_RS05475
subclass of: SO_0000673
so part of: DB313_RS05475
location: 12309..12740
location: region:12309-12740:1
so has part: feature:12309-12740:1:exon

WP_120104870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12309-12740:1:exon

DB313_RS05480
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05480
old locus tag: DB313_05485
so part of: sequence
location: 12906..14270
location: region:12906-14270:1
so has part: feature:12906-14270:1:exon
subclass of: SO_0000010

position:12906:1
position: 12906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14270:1
position: 14270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12906-14270:1:exon

DB313_RS05480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05480
old locus tag: DB313_05485
inference: COORDINATES: protein motif:HMM:NF018125.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF228 domain-containing protein
translation: MDEKASYNREGQGSIERARQNASRLYEYSIFFRNYIESTPEDALKNGIALNFLDEGGQVDSKARILLLKNLKVRLKEALRQAMISHRFYGFGYILIQTNGIDDDLKRGVNKDTPTGFVFLEPRKIVDNNPKLDKPYIEYVRNVYEESGDRRSRDSNIQIHKSRLIMYENYDIILDKFVPVYSQGLITGFELFEDIYRQISKRIGNFNFLHYKDETLVDLMNTIEEIRVEATKLRQGNKENHFLNFLTSASNNRLINNRIHSLEHTSEALERELGRLKNKLHNEGIFYTSNENASLEIVKYDLAFLKDAFELVKAKIGADTKEPLTRSFNEQVKGLGSDGKGDRTNYYDYLKGVQEAVEIAVNNKLNTHYNLDMKFNDIEVLNTEERIAQGTLLYGVFINVDEYLKVAHVVRTVCQGHFVCASGSIKAGDKLTFSDKGILEKAVNNRHTYTHVLQ
SIO_010081: DB313_RS05480
subclass of: SO_0000673
so part of: DB313_RS05480
location: 12906..14270
location: region:12906-14270:1
so has part: feature:12906-14270:1:exon

WP_120104871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12906-14270:1:exon

DB313_RS06470
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS06470
so part of: sequence
location: 14388..14555
location: region:14388-14555:1
so has part: feature:14388-14555:1:exon
subclass of: SO_0000010

position:14388:1
position: 14388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14555:1
position: 14555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14388-14555:1:exon

DB313_RS06470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS06470
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSYLDDNYYARRVAEVLEEGFIDEPEFYKWFTLNQVVNTDITSGHFQTTKCTIKR
SIO_010081: DB313_RS06470
subclass of: SO_0000673
so part of: DB313_RS06470
location: 14388..14555
location: region:14388-14555:1
so has part: feature:14388-14555:1:exon

WP_161555030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14388-14555:1:exon

DB313_RS05485
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05485
old locus tag: DB313_05490
so part of: sequence
location: complement(14612..14905)
location: region:14612-14905:-1
so has part: feature:14612-14905:-1:exon
subclass of: SO_0000010

position:14612:-1
position: 14612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14905:-1
position: 14905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14612-14905:-1:exon

DB313_RS05485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05485
old locus tag: DB313_05490
inference: COORDINATES: protein motif:HMM:NF017435.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF787 family protein
translation: MSSDTSKQQTAKNEWDLLTKAVKNYCDKDGFNSLDILLFKDIKEVKACLKANLHPFVCVTNPCDDKIISYITSLVISNNFIVFSKTIRDLPSTLKSC
SIO_010081: DB313_RS05485
subclass of: SO_0000673
so part of: DB313_RS05485
location: complement(14612..14905)
location: region:14612-14905:-1
so has part: feature:14612-14905:-1:exon

WP_274542546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14612-14905:-1:exon

DB313_RS05490
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05490
old locus tag: DB313_05495
so part of: sequence
location: 15271..16296
location: region:15271-16296:1
so has part: feature:15271-16296:1:exon
subclass of: SO_0000010

position:15271:1
position: 15271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16296:1
position: 16296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15271-16296:1:exon

DB313_RS05490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05490
old locus tag: DB313_05495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004791868.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BMP family protein
translation: MTRILFLFSMLIFACTAVKEQSRQVKIGIIADGSFADKGFNESALDALNEIREDYGVEIISRESSLDSFLGDIEELNGMGVDLMWLVGQPFADVAETVASENTAIKYAVIDAVYDSSILLPSNLTSMTFRTEESAFLVGYIAARKSRIDRIGFIGGMDVPVINTFRFGYEAGALYAKSDIYVEVDYVGDFNDKGLGKIAAEKMYSNGADVIFTAAGLTGLGVIDVAEKLGDGHYVIGVDQDQSQLAPNSIITSAVKDVRRAVLSFTANYLTTKHFDGGGRTNSYGLREGFVGHIRNPKMIPDEMEAEIEEISQKIINGKIVVPKDYKSFSKFIELRDEVKE
SIO_010081: DB313_RS05490
subclass of: SO_0000673
so part of: DB313_RS05490
location: 15271..16296
location: region:15271-16296:1
so has part: feature:15271-16296:1:exon

WP_238614542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15271-16296:1:exon

DB313_RS05495
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05495
old locus tag: DB313_05500
so part of: sequence
location: 16341..17351
location: region:16341-17351:1
so has part: feature:16341-17351:1:exon
subclass of: SO_0000010

position:16341:1
position: 16341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17351:1
position: 17351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16341-17351:1:exon

DB313_RS05495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05495
old locus tag: DB313_05500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011193710.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BMP family protein
translation: MIRLLILIICMLYASCTGSSERGIGKVSIITEGHFDDRGFNESALSGLRGVETNFKIEVVSKESTAAYYQADVESLKDNGSSLIWLMGFQMSELAMPVALSNEDVNYAVIDAIYDKDVLMPPNLAAITFRTEECAFLVGYIAARKTKTGKIGFVGGIKGDIVDSFRFGYEAGALYAKRDIKVVSEYAGSFSDVAIGATMARNMYSGGADIIFAAAGLSGVGVIEAAKELGDGYYVIGVDQDQSYLAPNNIITSAVKDIRRAVMSFTSAYLRTGEFKGGGVTSYGLREGFVGHIRNPKMIPSALEYELNIIKEKIIGGDIKVPAHEESYVNFAISFL
SIO_010081: DB313_RS05495
subclass of: SO_0000673
so part of: DB313_RS05495
location: 16341..17351
location: region:16341-17351:1
so has part: feature:16341-17351:1:exon

WP_120104873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16341-17351:1:exon

DB313_RS05500
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05500
old locus tag: DB313_05505
so part of: sequence
location: 17447..18244
location: region:17447-18244:1
so has part: feature:17447-18244:1:exon
subclass of: SO_0000010

position:17447:1
position: 17447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18244:1
position: 18244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17447-18244:1:exon

DB313_RS05500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05500
old locus tag: DB313_05505
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLYLNILAFISLVLPIVTLICSIDFYYNSVNNIERISMLAEDKAAAVLDLAIHEKRLIRREEIYGRHKGGVSDLESLGIIQYRIHIRRIRVPIFIESLRIAIEKIYKAFWMLVNIGYGSPAVGEVRLKLSLALSIILFVCDILDTINNLDIDSAARSAYIKEKINEFVNTTLGVDFLIKENFIDDMNRFDIEAFIYNFVSVIASIFMFIYNRLTNRDAIEANISETEVALVLLTNAAAYLAMGAGQIEDILNTTIKLNKKRPVAK
SIO_010081: DB313_RS05500
subclass of: SO_0000673
so part of: DB313_RS05500
location: 17447..18244
location: region:17447-18244:1
so has part: feature:17447-18244:1:exon

WP_120104874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17447-18244:1:exon

DB313_RS05505
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05505
old locus tag: DB313_05510
pseudo: true
so part of: sequence
location: 18344..19356
location: region:18344-19356:1
so has part: feature:18344-19356:1:exon
subclass of: SO_0000010

position:18344:1
position: 18344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19356:1
position: 19356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18344-19356:1:exon

DB313_RS05505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05505
old locus tag: DB313_05510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008882228.1
GO function: GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: L-threonylcarbamoyladenylate synthase
SIO_010081: DB313_RS05505
subclass of: SO_0000673
so part of: DB313_RS05505
location: 18344..19356
location: region:18344-19356:1
so has part: feature:18344-19356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18344-19356:1:exon

DB313_RS05510
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05510
old locus tag: DB313_05515
so part of: sequence
location: 19431..19781
location: region:19431-19781:1
so has part: feature:19431-19781:1:exon
subclass of: SO_0000010

position:19431:1
position: 19431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19781:1
position: 19781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19431-19781:1:exon

DB313_RS05510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05510
old locus tag: DB313_05515
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHRIFGLIFVAIIITLCVVVTGVLMIKLFNLIFGKAGSILPKLDKEYKRDNRIVKMEEAFDDYVKKQNEEKMREREIDESLMKKRSERAAKLAQIKQQEGSKSQVKPRGAIRRDRY
SIO_010081: DB313_RS05510
subclass of: SO_0000673
so part of: DB313_RS05510
location: 19431..19781
location: region:19431-19781:1
so has part: feature:19431-19781:1:exon

WP_120104875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19431-19781:1:exon

DB313_RS05515
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05515
old locus tag: DB313_05520
so part of: sequence
location: 20131..20397
location: region:20131-20397:1
so has part: feature:20131-20397:1:exon
subclass of: SO_0000010

position:20131:1
position: 20131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20397:1
position: 20397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20131-20397:1:exon

DB313_RS05515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05515
old locus tag: DB313_05520
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNKPINQDASFSRLDTSLFDFVYDVDIFTDIDLYDEYIGDLFDGEEVQVSGAFVNDLSIYSPNILLRSRICFLQDKTVSLVNILNII
SIO_010081: DB313_RS05515
subclass of: SO_0000673
so part of: DB313_RS05515
location: 20131..20397
location: region:20131-20397:1
so has part: feature:20131-20397:1:exon

WP_120104876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20131-20397:1:exon

DB313_RS05520
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05520
old locus tag: DB313_05525
so part of: sequence
location: complement(20650..21219)
location: region:20650-21219:-1
so has part: feature:20650-21219:-1:exon
subclass of: SO_0000010

position:20650:-1
position: 20650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21219:-1
position: 21219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20650-21219:-1:exon

DB313_RS05520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05520
old locus tag: DB313_05525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014486162.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosome replication/partitioning protein
translation: MKDIVLNNRIINKDDSPHLLNLEHEKTAHSHYLELKKRLKQNLKKEIYYKLDNILILKEIKDNEYYKIDGYKNFESFIKDYRLAKSQVYLYLRLADAVKEGFIEEKYIIEHGINKSIEMVKNKKQGIEESKQNPLKPLRFQLKNEESYNFYKKHAKFAAYLLDSIFSNKQELLQEFLNEFENLKSKKGK
SIO_010081: DB313_RS05520
subclass of: SO_0000673
so part of: DB313_RS05520
location: complement(20650..21219)
location: region:20650-21219:-1
so has part: feature:20650-21219:-1:exon

WP_120104877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20650-21219:-1:exon

DB313_RS05525
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05525
old locus tag: DB313_05530
so part of: sequence
location: complement(21261..22007)
location: region:21261-22007:-1
so has part: feature:21261-22007:-1:exon
subclass of: SO_0000010

position:21261:-1
position: 21261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22007:-1
position: 22007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21261-22007:-1:exon

DB313_RS05525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05525
old locus tag: DB313_05530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010883861.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MEIKKHKVISIANIKGGVGKSTSSLIFATLLAKKYKVLLIDMDTQASTTSYFYQKLQEKNINIKDTNIYQVLSEKIDINESIVNLDTNLDFIPSYIDLHKFNTESIPLKEFRLKESLFLLEDEYEYIIIDTNPSLDYTLSATLISTHYIIVPMVAEKWAAESLELLYFWIKQLKINNVPVFLLITRFKNHNTHKQLLEYFQSQKRFLGFIHEREDLNKRIAKNDIFDLTKDYIKEYGSILTKFLNQIF
SIO_010081: DB313_RS05525
subclass of: SO_0000673
so part of: DB313_RS05525
location: complement(21261..22007)
location: region:21261-22007:-1
so has part: feature:21261-22007:-1:exon

WP_120104878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21261-22007:-1:exon

DB313_RS05530
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05530
old locus tag: DB313_05535
so part of: sequence
location: 22594..22992
location: region:22594-22992:1
so has part: feature:22594-22992:1:exon
subclass of: SO_0000010

position:22594:1
position: 22594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22992:1
position: 22992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22594-22992:1:exon

DB313_RS05530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05530
old locus tag: DB313_05535
inference: COORDINATES: protein motif:HMM:NF014177.2
GO function: GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0032775 - DNA methylation on adenine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA adenine methylase
translation: MKLISREGSKYKYRKEIIKLFPKHDCYIEGFLGTGSIFFNKELAKYNIINDTSEFIYKMFYFLKKKPEELYRRVEKAIIYEDIVDENQDKIEYHIIRALYSLFGACTKTIVTNKINSRKNFLQRLESYKEEF
SIO_010081: DB313_RS05530
subclass of: SO_0000673
so part of: DB313_RS05530
location: 22594..22992
location: region:22594-22992:1
so has part: feature:22594-22992:1:exon

WP_120104879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22594-22992:1:exon

DB313_RS05535
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05535
old locus tag: DB313_05540
so part of: sequence
location: complement(23557..24078)
location: region:23557-24078:-1
so has part: feature:23557-24078:-1:exon
subclass of: SO_0000010

position:23557:-1
position: 23557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24078:-1
position: 24078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23557-24078:-1:exon

DB313_RS05535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05535
old locus tag: DB313_05540
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNFLLNLFIYLFLISCSVIGDTPEDILSSDEVLSSDEVKTLDDFQNQLLSSSMNISRQDREDTRKTKLDGFIQWLKQSPSKGRELIVVIKDLQEAIKEKNNGSDLDLANLTPTTPPTPNGGQSLKDMVAQLFSMACSAFDNEKTPNEEILNRIKDDLNDRTVLNMPPLAPIQS
SIO_010081: DB313_RS05535
subclass of: SO_0000673
so part of: DB313_RS05535
location: complement(23557..24078)
location: region:23557-24078:-1
so has part: feature:23557-24078:-1:exon

WP_120104880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23557-24078:-1:exon

DB313_RS05540
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05540
old locus tag: DB313_05545
so part of: sequence
location: 24215..25003
location: region:24215-25003:1
so has part: feature:24215-25003:1:exon
subclass of: SO_0000010

position:24215:1
position: 24215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25003:1
position: 25003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24215-25003:1:exon

DB313_RS05540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05540
old locus tag: DB313_05545
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIIRILVSLLLCFILMLGCQNEPSEYDIGYVTKISKEEIAKLEQFIDVTKDYESVLVDIYNDYIGDYNAIKTYSNCNGNSCLWSDVREEHVSRLKVGNLIEEYSKLVEMLQTGIDNYTPQTLINSIDKFKEDLKGELPLIGEENQRRPHNASIARNIAESYYNTMKIAVTSYVDAFAYLVSTLSSPELTEATESFATASKVFVEKRGDAATHAILYGIMTIISQGSLINAQSISEMFGKEGEEFSPSIGKLYYVYKASKPY
SIO_010081: DB313_RS05540
subclass of: SO_0000673
so part of: DB313_RS05540
location: 24215..25003
location: region:24215-25003:1
so has part: feature:24215-25003:1:exon

WP_120104881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24215-25003:1:exon

DB313_RS05555
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05555
old locus tag: DB313_05555
so part of: sequence
location: 25858..26118
location: region:25858-26118:1
so has part: feature:25858-26118:1:exon
subclass of: SO_0000010

position:25858:1
position: 25858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26118:1
position: 26118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25858-26118:1:exon

DB313_RS05555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05555
old locus tag: DB313_05555
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFVDKKLEHQIILGGIGKFDKDKISINDNIVVNKDSGKVAIRNDNASIKAILKEIVNLIKDIKITESYNDSITGSAATPLMLSLVL
SIO_010081: DB313_RS05555
subclass of: SO_0000673
so part of: DB313_RS05555
location: 25858..26118
location: region:25858-26118:1
so has part: feature:25858-26118:1:exon

WP_120104883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25858-26118:1:exon

DB313_RS05560
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
gene: bdr
locus tag: DB313_RS05560
old locus tag: DB313_05560
so part of: sequence
location: 26249..26806
location: region:26249-26806:1
so has part: feature:26249-26806:1:exon
subclass of: SO_0000010

position:26249:1
position: 26249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26806:1
position: 26806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26249-26806:1:exon

DB313_RS05560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
gene: bdr
locus tag: DB313_RS05560
old locus tag: DB313_05560
inference: COORDINATES: protein motif:HMM:NF040500.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bdr family repetitive protein
translation: MINLAYKQMPEYKYVKQAFIEKGFEEDIIESFLLLNLVYSDDNVKDKIKSLEDKLIAFEAECKGRFDKVDNKIEAVRNEIKTVRSELSSEIKEVRTELNGRIDKLDDKIEAVRNELSSEIKEVRNELSSEIKEVRNELNGRIDTIKSELSSKIDSAIKPLYWIFGFVSTFAVSAVIGLFIHYLSK
SIO_010081: DB313_RS05560
subclass of: SO_0000673
so part of: DB313_RS05560
location: 26249..26806
location: region:26249-26806:1
so has part: feature:26249-26806:1:exon

WP_120104884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26249-26806:1:exon

DB313_RS05565
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05565
old locus tag: DB313_05565
so part of: sequence
location: 27024..27953
location: region:27024-27953:1
so has part: feature:27024-27953:1:exon
subclass of: SO_0000010

position:27024:1
position: 27024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27953:1
position: 27953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27024-27953:1:exon

DB313_RS05565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05565
old locus tag: DB313_05565
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLINKALIIISLVSSVMSCKLYDKLLDKVEESLDKQEVSVRSSASKPDTNAITDMQDSDVGASEQNSGRSGRRARSLDDYSQNEQEEVVNKVDSSGSEAEQNVAIVKEDKVVVESLSDKSKQGVIVNEETKELCDKANEIKSQAETRLVEVGAITKNLEQIKKKLDEVKTEVTNAETDFNKARRGSNSESKQKLLADLHKAIDKVRNSRNYADLILYNEAKGSLESSEGSFNNAKSQAEIALSDIKSIYRASGGAYYIHKAKEAMEGAEKLLEDAQRDQSTLKFRMNQVEVDFSKLKQAHEALVGIMN
SIO_010081: DB313_RS05565
subclass of: SO_0000673
so part of: DB313_RS05565
location: 27024..27953
location: region:27024-27953:1
so has part: feature:27024-27953:1:exon

WP_120104885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27024-27953:1:exon

DB313_RS05570
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05570
old locus tag: DB313_05570
so part of: sequence
location: complement(28512..29087)
location: region:28512-29087:-1
so has part: feature:28512-29087:-1:exon
subclass of: SO_0000010

position:28512:-1
position: 28512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29087:-1
position: 29087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28512-29087:-1:exon

DB313_RS05570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05570
old locus tag: DB313_05570
inference: COORDINATES: protein motif:HMM:NF033725.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosome replication/partitioning protein
translation: MELKRKKNISPVLNPKVLPVKQKTEEEKERALYNQCKNTLDNNTDTIVELALENPKMLYLIKVNQLYRLDGHKSFNAFLKQYPKLGKTQAYTYIKIIKAIEDGIIDENHVVQNGYRRTIAFINNARQNGNLEQIQNKKFLHFGFDTPDIYMTCKQNKDFVEFLLKRIISEQDLFNKFMNEFTSLKNNQKKS
SIO_010081: DB313_RS05570
subclass of: SO_0000673
so part of: DB313_RS05570
location: complement(28512..29087)
location: region:28512-29087:-1
so has part: feature:28512-29087:-1:exon

WP_120104886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28512-29087:-1:exon

DB313_RS05580
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05580
old locus tag: DB313_05580
so part of: sequence
location: complement(29614..30405)
location: region:29614-30405:-1
so has part: feature:29614-30405:-1:exon
subclass of: SO_0000010

position:29614:-1
position: 29614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30405:-1
position: 30405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29614-30405:-1:exon

DB313_RS05580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05580
old locus tag: DB313_05580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539598.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MNTKKAQVVTFGSIKGGVGKSILSIMFSYMLSNMNKKVLIIDLNPQNSVTRYFMDKVFSLKNINVFCLLKQMVCDNAEKHFEVNDFLSQIDNYTYLLPSHPDLLDFEGESIKFKEVLLKFCFKEYLIKENFDYVIIDTAPNSNFLLKNALSVTDNFVVPIEVERWSIEGFSEIGKRVNRIEEINRKKIDISIIKNRFIKNRNEVIQLDNLLEEKYKNLIKGKVHYTTLLQKVINKGLVPNKNENYYKEIKNALSNILNIPNVI
SIO_010081: DB313_RS05580
subclass of: SO_0000673
so part of: DB313_RS05580
location: complement(29614..30405)
location: region:29614-30405:-1
so has part: feature:29614-30405:-1:exon

WP_120104888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29614-30405:-1:exon

DB313_RS05585
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05585
old locus tag: DB313_05585
so part of: sequence
location: 30777..31664
location: region:30777-31664:1
so has part: feature:30777-31664:1:exon
subclass of: SO_0000010

position:30777:1
position: 30777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31664:1
position: 31664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30777-31664:1:exon

DB313_RS05585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05585
old locus tag: DB313_05585
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVMIKSLMIISLVGSVMSCRLYDKLLDVAEESLDKQEVSMESHDKPETDATTSEQNSGRSGRRARSLSDDSEIEKEEIGSNKDISYNQAKQILAVAGDKGVKLYDSSALNDDKVSDLKKLTNEAKKINVEVDACIVEVDEIVNELSKINTRFSVMKIEIMAIEGAFKEAKKNLERLDKQLLFKLDQAIDKVNNKIKKAELIRYKDANNAVKYAGEDFERTKREADDALKRIGSGDTSWYWYYFPRAQRALYDAKNLLEIAKKDKSGLDSEMKQVEKDFDKLKQAHEDWSRNKTL
SIO_010081: DB313_RS05585
subclass of: SO_0000673
so part of: DB313_RS05585
location: 30777..31664
location: region:30777-31664:1
so has part: feature:30777-31664:1:exon

WP_120104889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30777-31664:1:exon