Borrelia turcica IST7 plasmid lp32-A, complete sequence.
type: Entry
definition: Borrelia turcica IST7 plasmid lp32-A, complete sequence.
sequence version: NZ_CP028886.1
sequence date: 2023-02-24
sequence: sequence
division: CON
label: NZ_CP028886.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN08918700
keyword: RefSeq
source: Borrelia turcica IST7
organism: Borrelia turcica IST7
taxonomy: Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Borreliaceae; Borrelia.
reference: 1
references: 30240834
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP028886.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. v2.3.0; other v. 9.5.3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 48.0x\nSequencing Technology :: PacBio; Illumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/23/2023 23:20:26\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,277\nCDSs (total) :: 1,240\nGenes (coding) :: 1,232\nCDSs (with protein) :: 1,232\nGenes (RNA) :: 37\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 31\nncRNAs :: 3\nPseudo Genes (total) :: 8\nCDSs (without protein) :: 8\nPseudo Genes (ambiguous residues) :: 0 of 8\nPseudo Genes (frameshifted) :: 5 of 8\nPseudo Genes (incomplete) :: 3 of 8\nPseudo Genes (internal stop) :: 2 of 8\nPseudo Genes (multiple problems) :: 2 of 8\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 32782
topology: linear
so has quality: SO_0000987
location: 1..32782
location: region:1-32782:1
RO_0002162: 1104446

NZ_CP028886
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN08918700
type: BioSample
SIO_000068: biosample

1
title: Genome-wide analysis of Borrelia turcica and 'Candidatus Borrelia tachyglossi' shows relapsing fever-like genomes with unique genomic links to Lyme disease Borrelia
author: Gofton, A.W.
author: Margos, G.
author: Fingerle, V.
author: Hepner, S.
author: Loh, S.M.
author: Ryan, U.
author: Irwin, P.
author: Oskam, C.L.
journal: Infect Genet Evol 66, 72-81 (2018)
pubmed: 30240834

30240834
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Margos, G.
journal: Submitted (12-APR-2018) German National Reference Centre for Borrelia, Bavarian Health and Food Safety Authority, Veterinarstrasse 2, Oberschleissheim 85764, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32782:1
position: 32782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-32782:1:source
so part of: sequence
organism: Borrelia turcica IST7
mol type: genomic DNA
strain: IST7
isolation source: Hyalomma aegyptium
host: tortoise
type material: type strain of Borrelia turcica
plasmid: lp32-A
country: Turkey
collection date: 2000
collected by: Yeditepe University, Istanbul, Turkey
genotype: ST793

1104446
type: Taxonomy
SIO_000068: taxonomy

DB313_RS05235
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05235
old locus tag: DB313_05240
so part of: sequence
location: complement(273..785)
location: region:273-785:-1
so has part: feature:273-785:-1:exon
subclass of: SO_0000010

position:273:-1
position: 273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785:-1
position: 785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273-785:-1:exon

DB313_RS05235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05235
old locus tag: DB313_05240
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSTLTIPQETTVDEVKKDLKGVGIKEATIEFLLVKSTNYHYAVLSQQLISVKEQVDLKFQIVNEKFEKTDQKIDSLEKNMDIKFGKMDDQIDSLEKNMDIKFGKMDDQINSLEKTMDLKFETIDVKIDSLEKNMKSELSKSNRMLILIATVGAPVCYHLLQQLILYYKG
SIO_010081: DB313_RS05235
subclass of: SO_0000673
so part of: DB313_RS05235
location: complement(273..785)
location: region:273-785:-1
so has part: feature:273-785:-1:exon

WP_120104826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273-785:-1:exon

DB313_RS05240
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05240
old locus tag: DB313_05245
so part of: sequence
location: complement(798..2171)
location: region:798-2171:-1
so has part: feature:798-2171:-1:exon
subclass of: SO_0000010

position:798:-1
position: 798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2171:-1
position: 2171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:798-2171:-1:exon

DB313_RS05240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05240
old locus tag: DB313_05245
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKISRDNKKSTSVVKNTSTKNVIVEHNNNTTLILNNRVDILVYVLKFIGLISIALLLLIFNIISSYSGFNSYNNLDNSNKEFVLFSLLVSIVMIIVPSMVFMFFYSKLREVKKGILDLGNLEKVLACILILIGVVAQLFSTFMTYETLYYSRFSNFIENEIAKHKEYVRGRKEFLAKHEANILNAIKELDIKINENNKRIKLANDEHIKLDYTFKTNKVNLLKEIERAEADNSRLKVEKNNKLKELEKNKSEIVSFNLKNLRLGGLYVLSGTSTVVSSDDIDNIVFCWGLFLLALMLDIFLSISFCMLRNTIGDFLLYYRLNYKSRYIDNKNNIKPTIKLKSNKIDLNSIPVEVYNALEVVSKNLEKDNKTIKSINVIHDNTKISIHNIRKMLQLLLDYGFSYRKQKRLILNVESILEFIKYFNGNKIDQNLKSELEKQYDFLETFSNLNMFIHKVV
SIO_010081: DB313_RS05240
subclass of: SO_0000673
so part of: DB313_RS05240
location: complement(798..2171)
location: region:798-2171:-1
so has part: feature:798-2171:-1:exon

WP_120104827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:798-2171:-1:exon

DB313_RS05245
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05245
old locus tag: DB313_05250
so part of: sequence
location: complement(2161..2721)
location: region:2161-2721:-1
so has part: feature:2161-2721:-1:exon
subclass of: SO_0000010

position:2161:-1
position: 2161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2721:-1
position: 2721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2161-2721:-1:exon

DB313_RS05245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05245
old locus tag: DB313_05250
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFKFLRNLFENIKIKVTSYKLVTPNRLAKIIKYEYLGNKIIFKTRIYENWFNSLSSVEKQFILKNKSKKFKNSYNTISYLFEYLLLFSKSKDLYYKNFLFYNEIKDKFNLSNSIEKENLVISNIEYMLSLFDKDFSYIKKSVKSYYYRYSIAKNKVVKNKVAIIDNKNSNRLCLFEIKGKELQYEN
SIO_010081: DB313_RS05245
subclass of: SO_0000673
so part of: DB313_RS05245
location: complement(2161..2721)
location: region:2161-2721:-1
so has part: feature:2161-2721:-1:exon

WP_120104828.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2161-2721:-1:exon

DB313_RS05250
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05250
old locus tag: DB313_05255
so part of: sequence
location: complement(2714..3643)
location: region:2714-3643:-1
so has part: feature:2714-3643:-1:exon
subclass of: SO_0000010

position:2714:-1
position: 2714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3643:-1
position: 3643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2714-3643:-1:exon

DB313_RS05250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05250
old locus tag: DB313_05255
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKKLLIKNKKLKGLNLKKIKSQKKSIYNNIITKSRKEKNLNRVNTPEGWSIVDHETYLKYHNIFCEDTNYILYPIFRTLFGARDSEEIFQRYEISKVSELYREILNLEDYLDLELRWGDIPVFTYISSLSWCLCELNEIDNIQAIFSMIIEFCIEFKLEKEFIEDTSEQDLFIYFARKCFEFGTIEIEKIKFENKENMIKKRQENLEVLLGKKEYIEFIDKKAILEKEKYELKEKYRELEKEKNELTEKYRELELKEYEIEEKQSLLEKEQHNFICWLEAEKYYKGEIEYQQLLEERKIREEIGVLYV
SIO_010081: DB313_RS05250
subclass of: SO_0000673
so part of: DB313_RS05250
location: complement(2714..3643)
location: region:2714-3643:-1
so has part: feature:2714-3643:-1:exon

WP_120104829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2714-3643:-1:exon

DB313_RS06455
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS06455
so part of: sequence
location: complement(4235..4795)
location: region:4235-4795:-1
so has part: feature:4235-4795:-1:exon
subclass of: SO_0000010

position:4235:-1
position: 4235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4795:-1
position: 4795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4235-4795:-1:exon

DB313_RS06455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS06455
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGNLVERISKLFFSSKKEDERGIDDVCMELEGKEEASVVKKRGGRPSLNLTEEEKKEKLRIKNRLYREKNKDKIKEYREKNKDKLKEYREKNKDKLKEYFEKNQDRIKEVRRQYYVNNKIEIVAKKREARHENPEKSREYQRLYRKAKPEVSIKSNRKYYYANQEELRRKRREKYARQKLERANIS
SIO_010081: DB313_RS06455
subclass of: SO_0000673
so part of: DB313_RS06455
location: complement(4235..4795)
location: region:4235-4795:-1
so has part: feature:4235-4795:-1:exon

WP_161555025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4235-4795:-1:exon

DB313_RS05260
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05260
old locus tag: DB313_05265
so part of: sequence
location: complement(4863..5612)
location: region:4863-5612:-1
so has part: feature:4863-5612:-1:exon
subclass of: SO_0000010

position:4863:-1
position: 4863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5612:-1
position: 5612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4863-5612:-1:exon

DB313_RS05260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05260
old locus tag: DB313_05265
inference: COORDINATES: protein motif:HMM:NF014177.2
GO function: GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0032775 - DNA methylation on adenine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA adenine methylase
translation: MKIINREGSKYKYREEIIRLFPKHDTYIEGFLGTGAIFLNKPLAKYNIINDASKFIYKIFYFLRKNPEELYRRVKEAIIYDEIVEENQEKIEYQVIRALYSIFGSCTKTMVVNKINARKNFLERLERYKEEIQSKLSQSMFFRKDIFKFIETITLNMRMSQKSFIYLDPPYSVSKGRLGDNKGWRIEKLEKLILEVKKYRWQYAISEFNDTKVMELFEKHGLNIHVIGKSSGINRTFGHSKCEILATSY
SIO_010081: DB313_RS05260
subclass of: SO_0000673
so part of: DB313_RS05260
location: complement(4863..5612)
location: region:4863-5612:-1
so has part: feature:4863-5612:-1:exon

WP_161555026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4863-5612:-1:exon

DB313_RS05265
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05265
old locus tag: DB313_05270
so part of: sequence
location: complement(5675..6106)
location: region:5675-6106:-1
so has part: feature:5675-6106:-1:exon
subclass of: SO_0000010

position:5675:-1
position: 5675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6106:-1
position: 6106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5675-6106:-1:exon

DB313_RS05265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05265
old locus tag: DB313_05270
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEVRLTEEESIELENNLKTLRELRKDNIIFPEEYKIELKNKYKADLIKIYEYIDKEENTFEAYKEKHGAGRSDYAVYKEWYSKPFPPEIQALIDKNGEDLREYLEEKYPEVDCSTIDDLNSEWFEWYNFLYGKLGMAWLRGE
SIO_010081: DB313_RS05265
subclass of: SO_0000673
so part of: DB313_RS05265
location: complement(5675..6106)
location: region:5675-6106:-1
so has part: feature:5675-6106:-1:exon

WP_120104832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5675-6106:-1:exon

DB313_RS05270
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05270
old locus tag: DB313_05275
so part of: sequence
location: complement(6108..6599)
location: region:6108-6599:-1
so has part: feature:6108-6599:-1:exon
subclass of: SO_0000010

position:6108:-1
position: 6108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6599:-1
position: 6599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6108-6599:-1:exon

DB313_RS05270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05270
old locus tag: DB313_05275
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSVHEDLIYMDWKRNKENNMSEVRLTEKDKIELEDTLKTLRELRKSKIILPEEYKIELKNKVKDDIIKICEYLEEDDRKFEEYKEKHGAGRDEDELYEAWHSKPYPRKIDNLIEKNISEIREYWEEKYPEVDCSTRGDLNSEWFCWYNFLYKKLGMAWLRGE
SIO_010081: DB313_RS05270
subclass of: SO_0000673
so part of: DB313_RS05270
location: complement(6108..6599)
location: region:6108-6599:-1
so has part: feature:6108-6599:-1:exon

WP_161555027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6108-6599:-1:exon

DB313_RS05275
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05275
old locus tag: DB313_05280
so part of: sequence
location: complement(6630..6932)
location: region:6630-6932:-1
so has part: feature:6630-6932:-1:exon
subclass of: SO_0000010

position:6630:-1
position: 6630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6932:-1
position: 6932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6630-6932:-1:exon

DB313_RS05275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05275
old locus tag: DB313_05280
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEVRYKRPVVREYRESNIRLTEEDKIAIENMLKDDIGENHEEIKEYIRNLMIYLGDMGECIDQSKVFKTWNNRYCPPNLKERFSKHKEKIEKYFEEKYS
SIO_010081: DB313_RS05275
subclass of: SO_0000673
so part of: DB313_RS05275
location: complement(6630..6932)
location: region:6630-6932:-1
so has part: feature:6630-6932:-1:exon

WP_120104834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6630-6932:-1:exon

DB313_RS05280
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05280
old locus tag: DB313_05285
so part of: sequence
location: complement(6934..7230)
location: region:6934-7230:-1
so has part: feature:6934-7230:-1:exon
subclass of: SO_0000010

position:6934:-1
position: 6934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7230:-1
position: 7230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6934-7230:-1:exon

DB313_RS05280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05280
old locus tag: DB313_05285
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRVDFAKRVKEMEVGTSVEEMLDMYERKREWQEYLEVHGEGRDPNEVYDEWVNTTIVARLGKRLERAKRMGERLDSEFEKRIGKTKVKNKIKMKKGE
SIO_010081: DB313_RS05280
subclass of: SO_0000673
so part of: DB313_RS05280
location: complement(6934..7230)
location: region:6934-7230:-1
so has part: feature:6934-7230:-1:exon

WP_120104835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6934-7230:-1:exon

DB313_RS05285
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05285
old locus tag: DB313_05290
so part of: sequence
location: complement(7227..8480)
location: region:7227-8480:-1
so has part: feature:7227-8480:-1:exon
subclass of: SO_0000010

position:7227:-1
position: 7227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8480:-1
position: 8480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7227-8480:-1:exon

DB313_RS05285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05285
old locus tag: DB313_05290
inference: COORDINATES: protein motif:HMM:NF014468.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid maintenance protein
translation: MIPQKPLFFKKTTKDKEVLLQKLIKNSQEATSHTKSVTINYVKSRIARTQTQIERSYKICWAIEVKTIEYYESGRLRHYSACDIHRMVNSILASKNSKPYASSTLRGDIKVLKELKLIEAVTKYLGDGNGGFSFYVINHKKWKDYKTIIKTHYENKLINDLANAKITGIFEEKIDSILFDEELETEIVEVENSQEGIEQIETDKLSNGGAQNSDLISKDIRSLYKYKNSKKSTLKRVEENGTDTKNRAKSNSSTKTRPKTAYNTTYEDYMEVRLESNYRVSRATMAKIRCNSNNVNTYRNALRNLEAGILVYGRDYLIGDITEHFTSEFVGEYSGKVWMMNPNTAKTNDFYKIWGRFTDKYTNKYKQQEMLSSRTYSDGYGNMSELDANGRFIERGVKPISGLLDKFRQDINKDSVI
SIO_010081: DB313_RS05285
subclass of: SO_0000673
so part of: DB313_RS05285
location: complement(7227..8480)
location: region:7227-8480:-1
so has part: feature:7227-8480:-1:exon

WP_120104836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7227-8480:-1:exon

DB313_RS05290
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05290
old locus tag: DB313_05295
so part of: sequence
location: complement(8789..9433)
location: region:8789-9433:-1
so has part: feature:8789-9433:-1:exon
subclass of: SO_0000010

position:8789:-1
position: 8789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9433:-1
position: 9433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8789-9433:-1:exon

DB313_RS05290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05290
old locus tag: DB313_05295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014486448.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isochorismatase family protein
translation: MEDKLSNLILQNATLILVDIQNDFLESGALPVPSGSEIIPLINHLQTCFNHVVATKDWHCENHISFSSINNKGWPKHCVQGTWGAEFPKSLNVEKIKAVFLKGQNKNSDSYSGFYNDSDKKESTGLFNYLKSNEINTVFIAGLALDFCVKETIIDAYKLGLQSYLIIDATRSISPFPDLVIQDLRDLGILTCLSKNIFDNSSLSHFKNSKSFYI
SIO_010081: DB313_RS05290
subclass of: SO_0000673
so part of: DB313_RS05290
location: complement(8789..9433)
location: region:8789-9433:-1
so has part: feature:8789-9433:-1:exon

WP_120104837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8789-9433:-1:exon

DB313_RS05295
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05295
old locus tag: DB313_05300
so part of: sequence
location: complement(9786..10529)
location: region:9786-10529:-1
so has part: feature:9786-10529:-1:exon
subclass of: SO_0000010

position:9786:-1
position: 9786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10529:-1
position: 10529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9786-10529:-1:exon

DB313_RS05295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05295
old locus tag: DB313_05300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012665364.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OspD family protein
translation: MGNLIKILLLSLLLLLAVSCVHEQQQSSSTEDGNHLNDEDINSANYESKKKDILSTLAQSLKQVENLLQVASLTTNKLNESDENTIGTAFTSAVNLISSATAHLKSASEKTHKISEFAGINIEEIKKAKDKATSADIASTEASKLAKQEEQNIQKLYKAQMQQSATNSEDIKQAKASVEVAWKAAEKAKDDIVEAEKAAKEALAKINTENTNNAKLTDIKEITELVVKIAENTKKVAQEVVDSLNKT
SIO_010081: DB313_RS05295
subclass of: SO_0000673
so part of: DB313_RS05295
location: complement(9786..10529)
location: region:9786-10529:-1
so has part: feature:9786-10529:-1:exon

WP_120104838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9786-10529:-1:exon

DB313_RS05300
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05300
old locus tag: DB313_05305
so part of: sequence
location: complement(10753..12027)
location: region:10753-12027:-1
so has part: feature:10753-12027:-1:exon
subclass of: SO_0000010

position:10753:-1
position: 10753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12027:-1
position: 12027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10753-12027:-1:exon

DB313_RS05300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05300
old locus tag: DB313_05305
inference: COORDINATES: protein motif:HMM:NF014468.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid maintenance protein
translation: MNIQQRSKKIKTHKKDQATFSILQKLTSLNESKIDNGMAQVSITYAKSMILKKDIILNRLKKICWAIETKNKEYISSKGTKEYSAKDIRQIVNSCLIKDGLKPVAISTMRGDIAKLKKIGLLKTWHQSLGEGNGSIARYIQNREKWPSKDTLIKAHLEKELIECFKNKIIVDNFIIQMEKENSKQSSLPKPRKSKKENSQEQIEQGKLSNGGVQNSDLISKDIRSLYKYKNSKKSTLKKEEENRTDAGKTSKNRAKSNSSTKTRPKIAYKTTYEEYMEVRLESSYRVSKATMAKIRCNSNNVNTYRNALRNLEAGILVYGRDYLIGDIVEHFTSEFVNGYKGKVWMMNPNTAKTNDFYKIWGMFTDKYTNKYKQQEMLARRAYYDGYGNMSELDANGRFIEGSVKLISGLLDKFRQDINKDSVI
SIO_010081: DB313_RS05300
subclass of: SO_0000673
so part of: DB313_RS05300
location: complement(10753..12027)
location: region:10753-12027:-1
so has part: feature:10753-12027:-1:exon

WP_120104839.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10753-12027:-1:exon

DB313_RS05305
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05305
old locus tag: DB313_05310
so part of: sequence
location: complement(12337..12738)
location: region:12337-12738:-1
so has part: feature:12337-12738:-1:exon
subclass of: SO_0000010

position:12337:-1
position: 12337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12738:-1
position: 12738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12337-12738:-1:exon

DB313_RS05305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05305
old locus tag: DB313_05310
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIIKNNIYLYTCKEIKNILDEKYQIHYSIEGISTKFQRVDAEIKIGKSAHIPEEFIRYLFINMNQKKHDIVQIKEKIRKRKEEIKLMLNYKELIGNSARNSKDKTRKHKIKDEATQKTITKLIKKIYNKTHII
SIO_010081: DB313_RS05305
subclass of: SO_0000673
so part of: DB313_RS05305
location: complement(12337..12738)
location: region:12337-12738:-1
so has part: feature:12337-12738:-1:exon

WP_120104840.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12337-12738:-1:exon

DB313_RS05310
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05310
old locus tag: DB313_05315
so part of: sequence
location: 13413..14357
location: region:13413-14357:1
so has part: feature:13413-14357:1:exon
subclass of: SO_0000010

position:13413:1
position: 13413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14357:1
position: 14357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13413-14357:1:exon

DB313_RS05310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05310
old locus tag: DB313_05315
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLGNNCNISFNNPLYRDQLIQSECFTNSYLDIIDRFFLKTPVTERGGGITLYSMKEQRGSKLESFSSDPNQLEGNAMSDFLLKEYSLRESFPYIVNKSDKLISEAEKLVMKKLSKLIYRSYLLEGMNDVHSKTSPVDVKITEDFLEKFKEVEERLNLTFNNVVMSVKTANDLIKNDKGIQKKRELYELPEFDAVNLLRIYLGIEPFIFELPEDNIYDGYIYLLHSSRSLDIYSTRVGLRNFVYNGSVGGGKERAKFDDGKFARRYYDERVGINGGYVAQLSVIGQLKVDNPNLFAVLKLNGAKELPKAYPTTKE
SIO_010081: DB313_RS05310
subclass of: SO_0000673
so part of: DB313_RS05310
location: 13413..14357
location: region:13413-14357:1
so has part: feature:13413-14357:1:exon

WP_120104841.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13413-14357:1:exon

DB313_RS05315
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05315
old locus tag: DB313_05320
so part of: sequence
location: complement(14686..18564)
location: region:14686-18564:-1
so has part: feature:14686-18564:-1:exon
subclass of: SO_0000010

position:14686:-1
position: 14686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18564:-1
position: 18564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14686-18564:-1:exon

DB313_RS05315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05315
old locus tag: DB313_05320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002662181.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I restriction enzyme HsdR N-terminal domain-containing protein
translation: MSKTKEILGVKTNHPYINDYREIINKLFIDTKSRDVIEKFFYYFKKELKNRNFSSSTSEAEVETFVEMISRELSYTVKQQSGITTEGKSSRTDILLFENQDEKDLFDKSLTSSKVIPSEKILLIIEVKNPNNDLRKAEEQLYVYLNQYKRDFGITTNGYIWRFYDKSQVYTGEKKYIEFNFSEILKNKFNRQEGFLLFFYLVRKERYLSGEIEEEKVKRNREQDTIKKTLKEILYANPDDSIVFKIAKNIYKELKESKDFTSRDLEIILEEATIFVLRIFFIAYIEDKFKDVLDKHSVYKKKVSFRHYFYPKLTKENAAYIKLLSIFSLLDEGMDNDSDKFPMFNGGLFSNSRAKHLTNQNLLTTEEIRDILTKILFFNEENARNKKYVEYSKIDVKSFGELYEALLEYDLRIAKDIIYRIKIDGNYLIYTENNLPPEYKNKGYITTYYEGDIYLTSMSLNRKKSGAFYTPDNLTEFMVTSAIEEQLKSKSPFEIKIIDNACGSGHFLIASLNYLTDKVYANIDDFKDVKIEMAKEQKLIEAETSKYGIRNIDDKLILKRMLLKKCIYGVDINPISVEVTMLSLWVNTFIFGTPLSFIEHHIKTGNALIGYIKNEFSHAARRYLPEDASLWLNENIKNIMSKIEESLKRLKCINDINKEQIEESKTIYSEYKRDRDKLKLVFSLVKLYELYSTKSLKLNQKINFGGSGSYDVTKLIDNIMNDNITEDASEIIKEVEAFHNEYKIFHYEIEFPDITDGFEIVIGNPPWEKVKFDEAEFFAKYNPGYRKLSISEQNKFKEETMGSEINTESKTLTSLYKDERSTIGKLNDIYKSSFTDFSCGGDPNLFRYFVAFNLKLIAKGGNLTYLIPSCMWSEHSSQKLRIYLFEYYELNYLYQFENKKRFVDVHSSFKFVIFQLSNNKKKTSQFKSKFMIQKNDNIIEEMTEELRSIKKGQHFPYKGFYLSLEDIQAISPSKYIVAEYGNEEESTLLKKMFNKYPLLTENYVNFGEGMHVTKYKSYFKASDEKKDDDILLYQGANIHQFNSRYFESEKAKENSKLLWISKENLDSLVSDCSRYEDFKIMYRKIAINTNERTMISALKPKDSYCTNSLYLNYEAPLISIFKKLFIIGVFNSLSFDFLIRKFVEVNVLKTCLYQCPMPQPTDEEILCNQIYFKLAKNSCILIVKNDLQNFSQLLELKEFNFNKEDKAKILKLNSKDKYFKAIEREINFIVASLYSLTPDEFEILLENFKVLKKKKDESYFSDLVEEYKRWRLKEEKKESESFIERTDCNKRE
SIO_010081: DB313_RS05315
subclass of: SO_0000673
so part of: DB313_RS05315
location: complement(14686..18564)
location: region:14686-18564:-1
so has part: feature:14686-18564:-1:exon

WP_120104842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14686-18564:-1:exon

DB313_RS06560
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS06560
so part of: sequence
location: complement(18750..19130)
location: region:18750-19130:-1
so has part: feature:18750-19130:-1:exon
subclass of: SO_0000010

position:18750:-1
position: 18750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19130:-1
position: 19130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18750-19130:-1:exon

DB313_RS06560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS06560
inference: COORDINATES: protein motif:HMM:NF017701.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF871 family protein
translation: MAKVNRYILELKADLNPKINPIEREIILENLHFNRGDITPYRIRSTMSRVYYKDINFSLHSPDEIKRGDILIDSSEYLGYGGELQIALKDTPNNGLVNVVGRIHEEELYLLDEIEAWEKFKIIENK
SIO_010081: DB313_RS06560
subclass of: SO_0000673
so part of: DB313_RS06560
location: complement(18750..19130)
location: region:18750-19130:-1
so has part: feature:18750-19130:-1:exon

WP_274542544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18750-19130:-1:exon

DB313_RS06565
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS06565
pseudo: true
so part of: sequence
location: complement(<19137..>19391)
location: region:19137-19391:-1
so has part: feature:19137-19391:-1:exon
subclass of: SO_0000010

position:19137:-1
position: 19137
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:19391:-1
position: 19391
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19137-19391:-1:exon

DB313_RS06565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS06565
inference: COORDINATES: protein motif:HMM:NF039260.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MupG family TIM beta-alpha barrel fold protein
SIO_010081: DB313_RS06565
subclass of: SO_0000673
so part of: DB313_RS06565
location: complement(<19137..>19391)
location: region:19137-19391:-1
so has part: feature:19137-19391:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19137-19391:-1:exon

DB313_RS05325
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05325
old locus tag: DB313_05330
so part of: sequence
location: complement(19524..19835)
location: region:19524-19835:-1
so has part: feature:19524-19835:-1:exon
subclass of: SO_0000010

position:19524:-1
position: 19524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19835:-1
position: 19835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19524-19835:-1:exon

DB313_RS05325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05325
old locus tag: DB313_05330
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVLEGYVNKSIMVLIGYRTRLKLNEHCKDSNKNSYKDLLLANLTSINNDEQKIQIRTTSYLQNKIILFSKNPQLLTISEEQPTLNDFVKERSNDMETKYRQNT
SIO_010081: DB313_RS05325
subclass of: SO_0000673
so part of: DB313_RS05325
location: complement(19524..19835)
location: region:19524-19835:-1
so has part: feature:19524-19835:-1:exon

WP_120104843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19524-19835:-1:exon

DB313_RS05330
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05330
old locus tag: DB313_05335
so part of: sequence
location: complement(21579..24731)
location: region:21579-24731:-1
so has part: feature:21579-24731:-1:exon
subclass of: SO_0000010

position:21579:-1
position: 21579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24731:-1
position: 24731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21579-24731:-1:exon

DB313_RS05330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05330
old locus tag: DB313_05335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014486467.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-6 DNA methylase
translation: MSIDLLKEYVNDLKRTKVEEKTEFADRDYLKKLINKIKPNSNIQIQNEPKRNKEGLGAPDFIVKNNESIVGYIEAKKIEQNLDDTLRSPQIEKYKQLSNNILLTNYIEFIWISKGNVVLREILIFKTDLEKHNTKIDPIKSEKVTNILNQFLESPIEKITSVEKLASLLAKRTKTLKELVEQTLNLNLSLPPDKHNTLTGTYNILKKRIYNDNFKADEFADSIAQTITYGFFLAKLNNTSNLIINFNNIKQFIPNNFALIQDILRLVDNIASSSEYKNIKWILEEIINIINNIDTEILFKEFSFAQTYQESLKDPYLYFYEDFLTQYDKHLRKSKGVYYTPYCVVNFIVNSLNNILKHTFDLENGFATREEVTVLDFATGTGTFLLEVIKCILKEVPKESGKQQDYITSHILKNIYGFEYLMAPYAVAHFKLFQYLKEICNFKFENENERLKIFLTNTLDLTEKTSQVEFQAFLPAISEENKLVNEVKNKPILVILGNPPYNVGSKNNNNHILKLMKAYKAIENKQLDERAIISLNDDYVKFIRFSEHKIENASEGLLGIITNNGYLDNVTFRGMRYHLLKTFDEIYILNLHGNSRKKEKTDDGDIDENIFDIQTGVAIGIFIKNKTREETNKLANVFYKNIKGTKIQKYAFLDSNDIFSINTFEKLNLNPPYYFFVKKNLVNVDTYNKGISLKDIFSKYSVGILSGKDKIAIDFTKEKLLFKLNDLAYLSEQDARYKYGLGKDTENWNLLEVQKFLKSTNIDEKHVQNITYRPFDNRFIYYSKSKGVVARPLYKTMQHILDIEDNIALATTRFLSTDSFKHIFITSNISEGCLVSNKTKEASYFYPLFIKEEHGALGNVVKDNFTESFRNFIDTKYPKKFKPQKILAYIYAILNSNTYKTKFYEFLKIDFPKIIFTDEIETFESLSRLGNMLISAHLLKTTGNVDKNIGMHISLNDNDKHIVEKIQYRSDTEELYYNNNSKFINVPYNVYNFFIGSYQVLHSYLKYRKGRYLSIDEIEHIEKIIRVVYYTIDIQHQIDLITCNLKEFNT
SIO_010081: DB313_RS05330
subclass of: SO_0000673
so part of: DB313_RS05330
location: complement(21579..24731)
location: region:21579-24731:-1
so has part: feature:21579-24731:-1:exon

WP_120104844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21579-24731:-1:exon

DB313_RS05335
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05335
old locus tag: DB313_05340
so part of: sequence
location: complement(24697..25275)
location: region:24697-25275:-1
so has part: feature:24697-25275:-1:exon
subclass of: SO_0000010

position:24697:-1
position: 24697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25275:-1
position: 25275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24697-25275:-1:exon

DB313_RS05335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05335
old locus tag: DB313_05340
inference: COORDINATES: protein motif:HMM:NF016359.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage terminase large subunit
translation: MPKFACLKYAYNKIRHKLIASSRGMCKTHNSARIWLEYLITEQVNDMIWFRYTESAVYDSFIKLFGSIIDKEGLEKYAKIRQNKHNELWKVRSPYTNSVPDFRDAFSPPALKGIEGKNKVLFDEATEFSNSSLLKLEGNIKREDRVEIWYCFNFGEVSRYTLYTFKYTIKYCTIRIGQFISSEYRFIKRIRK
SIO_010081: DB313_RS05335
subclass of: SO_0000673
so part of: DB313_RS05335
location: complement(24697..25275)
location: region:24697-25275:-1
so has part: feature:24697-25275:-1:exon

WP_120104845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24697-25275:-1:exon

DB313_RS06570
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS06570
so part of: sequence
location: complement(25837..25968)
location: region:25837-25968:-1
so has part: feature:25837-25968:-1:exon
subclass of: SO_0000010

position:25837:-1
position: 25837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25968:-1
position: 25968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25837-25968:-1:exon

DB313_RS06570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS06570
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGTEAHTTEILDTIFGKNNWKYRVYSNKDNVSIDIRHLTEQKK
SIO_010081: DB313_RS06570
subclass of: SO_0000673
so part of: DB313_RS06570
location: complement(25837..25968)
location: region:25837-25968:-1
so has part: feature:25837-25968:-1:exon

WP_274542543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25837-25968:-1:exon

DB313_RS05345
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05345
old locus tag: DB313_05350
so part of: sequence
location: complement(26095..26295)
location: region:26095-26295:-1
so has part: feature:26095-26295:-1:exon
subclass of: SO_0000010

position:26095:-1
position: 26095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26295:-1
position: 26295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26095-26295:-1:exon

DB313_RS05345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05345
old locus tag: DB313_05350
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSSSHQDSINTEFEIYRAKYLNLIDNQNIHNEVTKNYYEFRISKLYRLYKIAQEAHNKFFWHLWI
SIO_010081: DB313_RS05345
subclass of: SO_0000673
so part of: DB313_RS05345
location: complement(26095..26295)
location: region:26095-26295:-1
so has part: feature:26095-26295:-1:exon

WP_120104847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26095-26295:-1:exon

DB313_RS05350
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05350
old locus tag: DB313_05355
so part of: sequence
location: 26534..26851
location: region:26534-26851:1
so has part: feature:26534-26851:1:exon
subclass of: SO_0000010

position:26534:1
position: 26534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26851:1
position: 26851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26534-26851:1:exon

DB313_RS05350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05350
old locus tag: DB313_05355
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLIVCAVAFLLLNLVYGDDNVKDKIKSLEDKLIAFEAECKDRFDKVDNKIEAVRSELSSEIKEVRNELSSKIDSAIKPLYWIFGFVSTFAVSAVIGLFIHYLSNK
SIO_010081: DB313_RS05350
subclass of: SO_0000673
so part of: DB313_RS05350
location: 26534..26851
location: region:26534-26851:1
so has part: feature:26534-26851:1:exon

WP_120104848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26534-26851:1:exon

DB313_RS05355
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05355
old locus tag: DB313_05360
so part of: sequence
location: complement(26870..27460)
location: region:26870-27460:-1
so has part: feature:26870-27460:-1:exon
subclass of: SO_0000010

position:26870:-1
position: 26870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27460:-1
position: 27460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26870-27460:-1:exon

DB313_RS05355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05355
old locus tag: DB313_05360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYDWLYKSSINPKITNQHKIMRGTAFNFFKECMIIAIDSFNTNGKLFNIKELKYEFRKVLTNREYNVASNGVIVKDFFDHFTDLDKKSEVKLKGIETTQFHSQDTIENKIIPDEVARLNQLLNFKNKDTIKENSQILTFLLKKILLSKSKVVLLDLFQFDFLKSKFPHLSKQRHKSIIDILNRNIVLIKEKIKLTD
SIO_010081: DB313_RS05355
subclass of: SO_0000673
so part of: DB313_RS05355
location: complement(26870..27460)
location: region:26870-27460:-1
so has part: feature:26870-27460:-1:exon

WP_120104849.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26870-27460:-1:exon

DB313_RS05360
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05360
old locus tag: DB313_05365
so part of: sequence
location: 27516..28256
location: region:27516-28256:1
so has part: feature:27516-28256:1:exon
subclass of: SO_0000010

position:27516:1
position: 27516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28256:1
position: 28256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27516-28256:1:exon

DB313_RS05360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05360
old locus tag: DB313_05365
inference: COORDINATES: protein motif:HMM:NF027994.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protelomerase family protein
translation: MSTTNYSDNYISKLVSQIRGRIKEINPTHPMLKYFKLTREEYEAITAEKNRRVKERNANKKSFNKREFLLLTEELLLSHRFELLYMGLLLASGRRSLEIIAGSFSDSQEKDSILFQGQLKTRDTKRFNTPYSIPLTVDKKLFLNAYSIFTNTTQYKDIRERWEDNELSDSTINLLLKRELTKIFDSNFLLSDFRAIYTTLILKREGYFNDIHGSKEIYPRVAEILGHINDESASQSYRDFKLTNSS
SIO_010081: DB313_RS05360
subclass of: SO_0000673
so part of: DB313_RS05360
location: 27516..28256
location: region:27516-28256:1
so has part: feature:27516-28256:1:exon

WP_120104850.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27516-28256:1:exon

DB313_RS05365
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05365
old locus tag: DB313_05370
so part of: sequence
location: complement(28248..28433)
location: region:28248-28433:-1
so has part: feature:28248-28433:-1:exon
subclass of: SO_0000010

position:28248:-1
position: 28248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28433:-1
position: 28433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28248-28433:-1:exon

DB313_RS05365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05365
old locus tag: DB313_05370
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANSNAREQNTNDNNFTNKFIDEIKSIDKYLSGNIIDDKTYKLRLNGRAKAFLQNINLLLA
SIO_010081: DB313_RS05365
subclass of: SO_0000673
so part of: DB313_RS05365
location: complement(28248..28433)
location: region:28248-28433:-1
so has part: feature:28248-28433:-1:exon

WP_120104851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28248-28433:-1:exon

DB313_RS05370
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05370
old locus tag: DB313_05375
so part of: sequence
location: complement(28676..29560)
location: region:28676-29560:-1
so has part: feature:28676-29560:-1:exon
subclass of: SO_0000010

position:28676:-1
position: 28676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29560:-1
position: 29560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28676-29560:-1:exon

DB313_RS05370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05370
old locus tag: DB313_05375
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNRIIIFLIFILFLSCDPQGSGKPDTTQQGSGKPGTTQQGSDQPGSTTQGSNQPGSTTQGSDQPGSTTQGSNQPGSTTQGSDQPDSTTQGSDQPGSTTQGSNQPDSTTQGSNQPGSTTQGSNQPGSTTQGSDQPDSTTQGSDQPDTKSNYQNVSTTPINQANTYLLDEKANQLSEEIRQYVQAAKNTSTTTQEKVKTANKLLKTVNDLSDILNNIAILKNIDQAPSITEIDAKIKTALNNIANDLSESTSDESLVNERIEALRTLYNKLLSEKYDLVQRITAYSQIRVDIPLEN
SIO_010081: DB313_RS05370
subclass of: SO_0000673
so part of: DB313_RS05370
location: complement(28676..29560)
location: region:28676-29560:-1
so has part: feature:28676-29560:-1:exon

WP_120104852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28676-29560:-1:exon

DB313_RS05375
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
gene: bdr
locus tag: DB313_RS05375
old locus tag: DB313_05380
so part of: sequence
location: 30145..30531
location: region:30145-30531:1
so has part: feature:30145-30531:1:exon
subclass of: SO_0000010

position:30145:1
position: 30145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30531:1
position: 30531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30145-30531:1:exon

DB313_RS05375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
gene: bdr
locus tag: DB313_RS05375
old locus tag: DB313_05380
inference: COORDINATES: protein motif:HMM:NF040500.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bdr family repetitive protein
translation: MNNLAYKQMPEYKYVKQAFIEKGFEEDIIESFLLLNLVYGDDNVKDKIKSLEDKLIAFEAECKGRFDNVDNKIAEVRSEIKTVRSELSSEIKEVRTKLNGRIDKLDTKIEAVKNELKSELSSKIDSAI
SIO_010081: DB313_RS05375
subclass of: SO_0000673
so part of: DB313_RS05375
location: 30145..30531
location: region:30145-30531:1
so has part: feature:30145-30531:1:exon

WP_120104853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30145-30531:1:exon

DB313_RS05380
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05380
old locus tag: DB313_05385
so part of: sequence
location: complement(30672..30854)
location: region:30672-30854:-1
so has part: feature:30672-30854:-1:exon
subclass of: SO_0000010

position:30672:-1
position: 30672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30854:-1
position: 30854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30672-30854:-1:exon

DB313_RS05380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05380
old locus tag: DB313_05385
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRVTATGGFNNPNDLANAINNIIEKLEEEGREVINIKYAISALSGNIYATESHYALILFK
SIO_010081: DB313_RS05380
subclass of: SO_0000673
so part of: DB313_RS05380
location: complement(30672..30854)
location: region:30672-30854:-1
so has part: feature:30672-30854:-1:exon

WP_120104854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30672-30854:-1:exon

DB313_RS05385
type: Gene
subclass of: SO_0000704
RO_0002162: 1104446
locus tag: DB313_RS05385
old locus tag: DB313_05390
so part of: sequence
location: complement(30865..32430)
location: region:30865-32430:-1
so has part: feature:30865-32430:-1:exon
subclass of: SO_0000010

position:30865:-1
position: 30865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32430:-1
position: 32430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30865-32430:-1:exon

DB313_RS05385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1104446
locus tag: DB313_RS05385
old locus tag: DB313_05390
inference: COORDINATES: protein motif:HMM:NF027994.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protelomerase family protein
translation: MANSNTREQNTNDNNFTNKFIDEIKSLDKYLSEDIIDDKTYKLRLNGRAKAFLQNIKSTTNYSDNYISKLVTQIRGRIKEINPTHPMLKYFKLTREEYEAITAEKNRRVKERNANKKSFNKREFLLLTEELLLSHRFELLYMGLLLASGRRSLEIIAGSFSDSQEKDSILFQGQLKTRDAKRFNTPYSIPLTVDKKLFLTAYSIFSNTTQYKDIRERWEDNELSDSTINLLLKRELTKIFDSNFLVSDFRSIYTTLILKREGYFDDTHGSKEIYPRVAEILGHIDDESAAQSYRDFKLTNSPSIADIKLKINYIRQNRKLEISKKMYDWLYKSSINSKITNQHKIMRGTAFNFFKECMIIAIDSFNTNGKLFNIKELKYEFRKVLSSKGYNVASNGVIVKDFFDHFTGLDKKSEVKLKGIETTQFHSQDTIENKIIPDEVARLNQLLNFKNKDTIKENSQILTFLLKKILLSKSKVVLLDLFQFDFLKSKFPNLSKQRHKSIIDILNRNIVLIKEKIKLTD
SIO_010081: DB313_RS05385
subclass of: SO_0000673
so part of: DB313_RS05385
location: complement(30865..32430)
location: region:30865-32430:-1
so has part: feature:30865-32430:-1:exon

WP_120104628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30865-32430:-1:exon