Chelmon rostratus mitochondrion, complete genome.
type: Entry
definition: Chelmon rostratus mitochondrion, complete genome.
sequence version: NC_025953.1
sequence date: 2023-04-03
sequence: sequence
division: VRT
label: NC_025953.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Chelmon rostratus (copperband butterflyfish)
organism: Chelmon rostratus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae; Chelmon.
reference: 1
references: 25427816
reference: 2
reference: 3
comment: PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to KM978959.\n\n##Assembly-Data-START##\nSequencing Technology :: Sanger dideoxy sequencing\n##Assembly-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16538
topology: circular
so has quality: SO_0000988
location: 1..16538
location: region:1-16538:1
RO_0002162: 109905

NC_025953
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Complete mitochondrial genome of copperband butterflyfish Chelmon rostratus (Teleostei, Perciformes, Chaetodontidae)
author: Wang, L.J.
author: You, F.
author: Wu, Z.H.
journal: Mitochondrial DNA, 1-2 (2014) In press
pubmed: 25427816
comments: Publication Status: Available-Online prior to print

25427816
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
journal: Submitted (16-DEC-2014) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Wang, L.
author: You, F.
author: Wu, Z.
journal: Submitted (13-OCT-2014) Key Laboratory of Experimental Marine Biology, Institute of Oceanology, Chinese Academy of Sciences, No. 7 Nanhai Road, Qingdao, Shandong 266071, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16538:1
position: 16538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16538:1:source
so part of: sequence
organism: Chelmon rostratus
organelle: mitochondrion
mol type: genomic DNA

109905
type: Taxonomy
SIO_000068: taxonomy

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 109905
product: tRNA-Phe
so part of: sequence
location: 1..69
location: region:1-69:1
so has part: feature:1-69:1:region

position:69:1
position: 69
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-69:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 109905
product: 12S ribosomal RNA
so part of: sequence
location: 70..1018
location: region:70-1018:1
so has part: feature:70-1018:1:region

position:70:1
position: 70
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1018:1
position: 1018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70-1018:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 109905
product: tRNA-Val
so part of: sequence
location: 1019..1088
location: region:1019-1088:1
so has part: feature:1019-1088:1:region

position:1019:1
position: 1019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088:1
position: 1088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1019-1088:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 109905
product: 16S ribosomal RNA
so part of: sequence
location: 1089..2781
location: region:1089-2781:1
so has part: feature:1089-2781:1:region

position:1089:1
position: 1089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2781:1
position: 2781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1089-2781:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 109905
product: tRNA-Leu
codon recognized: UUR
so part of: sequence
location: 2782..2854
location: region:2782-2854:1
so has part: feature:2782-2854:1:region

position:2782:1
position: 2782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2854:1
position: 2854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2782-2854:1:region

ND1
type: Gene
subclass of: SO_0000704
RO_0002162: 109905
gene: ND1
so part of: sequence
location: 2855..3829
location: region:2855-3829:1
so has part: feature:2855-3829:1:exon
subclass of: SO_0000010

22549231
type: Gene
SIO_000068: ncbigene

position:2855:1
position: 2855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3829:1
position: 3829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2855-3829:1:exon

ND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 109905
gene: ND1
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MTSILITHIISPLTFIVPVLLAVAFLTLIERKVLGYMQLRKGPNVVGPYGLLQPIADGLKLFIKEPIRPSTSSPLLFTMAPILALTLALTLWAPMPMPYPVVDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNIIIFTGGFTLQTFNVAQESTWLILPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSATMFLGASHFPLMPELTTVNMMIKATLLSIVFLWVRASYPRFRYDQLMHLIWKSFLPLTLALVIWHLALPIAFTGLPPQL
SIO_010081: ND1
subclass of: SO_0000673
so part of: ND1
location: 2855..3829
location: region:2855-3829:1
so has part: feature:2855-3829:1:exon

YP_009112421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2855-3829:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 109905
product: tRNA-Ile
so part of: sequence
location: 3834..3903
location: region:3834-3903:1
so has part: feature:3834-3903:1:region

position:3834:1
position: 3834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3903:1
position: 3903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3834-3903:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 109905
product: tRNA-Gln
so part of: sequence
location: complement(3903..3973)
location: region:3903-3973:-1
so has part: feature:3903-3973:-1:region

position:3903:-1
position: 3903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3973:-1
position: 3973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3903-3973:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 109905
product: tRNA-Met
so part of: sequence
location: 3973..4041
location: region:3973-4041:1
so has part: feature:3973-4041:1:region

position:3973:1
position: 3973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4041:1
position: 4041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3973-4041:1:region

ND2
type: Gene
subclass of: SO_0000704
RO_0002162: 109905
gene: ND2
so part of: sequence
location: 4042..5087
location: region:4042-5087:1
so has part: feature:4042-5087:1:exon
subclass of: SO_0000010

22549219
type: Gene
SIO_000068: ncbigene

position:4042:1
position: 4042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5087:1
position: 5087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4042-5087:1:exon

ND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 109905
gene: ND2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:5086..5087,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MNPYILATLLFGLGLGTTITFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAATLLFAGTTNAWLTGQWDIQQLHHPIPTIMITTALALKIGIAPLHSWLPEVLQGLDLTTGLILSTWQKLAPFILLIQIQPTSPNILMMLGLISVLVGGWGGLNQTQLRKILAYSSIAHLGWMLLVMQFSPSLSFLTLITYFIMTSSTFLVFKLNKSTSINALATSWAKAPMITTLAPLVLLSLGGLPPLTGFMPKWLILQELTKQSFALPATVAALAALLSLYFYLRLSYAMTLTSSANNLTGITPWRLPSSQLTLPLAISTIATVSLLPLTPAMTALLTL
SIO_010081: ND2
subclass of: SO_0000673
so part of: ND2
location: 4042..5087
location: region:4042-5087:1
so has part: feature:4042-5087:1:exon

YP_009112422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4042-5087:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 109905
product: tRNA-Trp
so part of: sequence
location: 5088..5161
location: region:5088-5161:1
so has part: feature:5088-5161:1:region

position:5088:1
position: 5088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5161:1
position: 5161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5088-5161:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 109905
product: tRNA-Ala
so part of: sequence
location: complement(5162..5230)
location: region:5162-5230:-1
so has part: feature:5162-5230:-1:region

position:5162:-1
position: 5162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5230:-1
position: 5230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5162-5230:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 109905
product: tRNA-Asn
so part of: sequence
location: complement(5232..5305)
location: region:5232-5305:-1
so has part: feature:5232-5305:-1:region

position:5232:-1
position: 5232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5305:-1
position: 5305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5232-5305:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 109905
product: tRNA-Cys
so part of: sequence
location: complement(5342..5407)
location: region:5342-5407:-1
so has part: feature:5342-5407:-1:region

position:5342:-1
position: 5342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5407:-1
position: 5407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5342-5407:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 109905
product: tRNA-Tyr
so part of: sequence
location: complement(5408..5475)
location: region:5408-5475:-1
so has part: feature:5408-5475:-1:region

position:5408:-1
position: 5408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5475:-1
position: 5475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5408-5475:-1:region

COX1
type: Gene
subclass of: SO_0000704
RO_0002162: 109905
gene: COX1
so part of: sequence
location: 5477..7021
location: region:5477-7021:1
so has part: feature:5477-7021:1:exon
subclass of: SO_0000010

22549220
type: Gene
SIO_000068: ncbigene

position:5477:1
position: 5477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7021:1
position: 7021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5477-7021:1:exon

COX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 109905
gene: COX1
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MATTRWLFSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFFLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSAIKWETPLLWSLGFIFLFTVGGLTGIVLANSSLDVVLHDTYYVVAHFHYVLSMGAVFAILAAFVHWFPLFSGYTLHSTWTKIHFGIMFVGVNLTFFPQHFLGLAGMPRRYSDYPDAYTIWNTISSIGSLISLVAVIMFLFIIWEAFAAKREVLSVELTMTNVEWLHGSPPPYHTFEEPAFVQIN
SIO_010081: COX1
subclass of: SO_0000673
so part of: COX1
location: 5477..7021
location: region:5477-7021:1
so has part: feature:5477-7021:1:exon

YP_009112423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5477-7021:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 109905
product: tRNA-Ser
codon recognized: UCN
so part of: sequence
location: complement(7027..7097)
location: region:7027-7097:-1
so has part: feature:7027-7097:-1:region

position:7027:-1
position: 7027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7097:-1
position: 7097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7027-7097:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 109905
product: tRNA-Asp
so part of: sequence
location: 7100..7169
location: region:7100-7169:1
so has part: feature:7100-7169:1:region

position:7100:1
position: 7100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7169:1
position: 7169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7100-7169:1:region

COX2
type: Gene
subclass of: SO_0000704
RO_0002162: 109905
gene: COX2
so part of: sequence
location: 7178..7868
location: region:7178-7868:1
so has part: feature:7178-7868:1:exon
subclass of: SO_0000010

22549221
type: Gene
SIO_000068: ncbigene

position:7178:1
position: 7178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7868:1
position: 7868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7178-7868:1:exon

COX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 109905
gene: COX2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:7868,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit II
translation: MAHPSQLGFQDATSPVMEELLYFHDHALMIVIMISTFVLYIIVAMVSTKITNKYILDSQEIEIVWTILPGFILIFIALPSLRILYLMDEINNPHLTIKALGHQWYWSYEYTDFEELSFDSYMIPTQDLTPGQSRLLEVDHRMVVPTESPIRMLVSAEDVLHSWTVPTLGVKMDAVPGRLNQTAFIASRPGVFYGQCSEICGVNHSFMPVVVEAVPLKHFENWSSLMMEDA
SIO_010081: COX2
subclass of: SO_0000673
so part of: COX2
location: 7178..7868
location: region:7178-7868:1
so has part: feature:7178-7868:1:exon

YP_009112424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7178-7868:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 109905
product: tRNA-Lys
so part of: sequence
location: 7869..7942
location: region:7869-7942:1
so has part: feature:7869-7942:1:region

position:7869:1
position: 7869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7942:1
position: 7942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7869-7942:1:region

ATP8
type: Gene
subclass of: SO_0000704
RO_0002162: 109905
gene: ATP8
so part of: sequence
location: 7944..8111
location: region:7944-8111:1
so has part: feature:7944-8111:1:exon
subclass of: SO_0000010

22549222
type: Gene
SIO_000068: ncbigene

position:7944:1
position: 7944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8111:1
position: 8111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7944-8111:1:exon

ATP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 109905
gene: ATP8
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLDPAPWFATLLLSWLVFLTIIPPKIMSHQFPNEFSPQGTKKPQTESWTWPWY
SIO_010081: ATP8
subclass of: SO_0000673
so part of: ATP8
location: 7944..8111
location: region:7944-8111:1
so has part: feature:7944-8111:1:exon

YP_009112425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7944-8111:1:exon

ATP6
type: Gene
subclass of: SO_0000704
RO_0002162: 109905
gene: ATP6
so part of: sequence
location: 8102..8785
location: region:8102-8785:1
so has part: feature:8102-8785:1:exon
subclass of: SO_0000010

22549223
type: Gene
SIO_000068: ncbigene

position:8102:1
position: 8102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8785:1
position: 8785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8102-8785:1:exon

ATP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 109905
gene: ATP6
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 6
translation: MMLSFFDQFLSPSFLGISLMTLALILPWILFPTPSNRWLNNRLLTLQNWSINRFTQQLFMPLNQEGHKWALILCSLMMFLITLNSLGLLPYTFTPTTQLALNMGLAVPFWLATVITGLRNRPTIVIGHILPEATPGPLILVLIIIETASLLIRPLALGVRLTANLTAGHLLIQLISTATFVLLPMMTTVASLTLILLYLLSLLEVAVAMIQAYVFVLLLSLYLQENI
SIO_010081: ATP6
subclass of: SO_0000673
so part of: ATP6
location: 8102..8785
location: region:8102-8785:1
so has part: feature:8102-8785:1:exon

YP_009112426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8102-8785:1:exon

COX3
type: Gene
subclass of: SO_0000704
RO_0002162: 109905
gene: COX3
so part of: sequence
location: 8795..9579
location: region:8795-9579:1
so has part: feature:8795-9579:1:exon
subclass of: SO_0000010

22549224
type: Gene
SIO_000068: ncbigene

position:8795:1
position: 8795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9579:1
position: 9579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8795-9579:1:exon

COX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 109905
gene: COX3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9578..9579,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MAHQAHPFHMISPSPWPLTGAIAALLMTSGLAIWFHFHSINLILLGTVLLLLTMYQWWRDVIREATFQGHHTPPVQKGLRFGMILFITSEVFFFLGFFWAFYHSSLAPTPELGGCWPPAGITALDPFEVPLLNTAVLLSSGVTVTWAHHSIMEGERKQAIQSLALTVALGLYFTFLQGMEYYEAPFTIADGVYGATFFVATGFHGLHVIIGSTFLAVCLLRQTQHHFTTQHHFGFEAAAWYWHFVDVVWLFLYIAIYWWGS
SIO_010081: COX3
subclass of: SO_0000673
so part of: COX3
location: 8795..9579
location: region:8795-9579:1
so has part: feature:8795-9579:1:exon

YP_009112427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8795-9579:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 109905
product: tRNA-Gly
so part of: sequence
location: 9580..9649
location: region:9580-9649:1
so has part: feature:9580-9649:1:region

position:9580:1
position: 9580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9649:1
position: 9649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9580-9649:1:region

ND3
type: Gene
subclass of: SO_0000704
RO_0002162: 109905
gene: ND3
so part of: sequence
location: 9650..9998
location: region:9650-9998:1
so has part: feature:9650-9998:1:exon
subclass of: SO_0000010

22549225
type: Gene
SIO_000068: ncbigene

position:9650:1
position: 9650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9998:1
position: 9998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9650-9998:1:exon

ND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 109905
gene: ND3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9998,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNLITTIIAIASILSVVLIIVSFWLPLINPDHEKLSPYECGFDPLGTARLPFSLRFFLIAILFLLFDLEIALLLPLPWGDQLSSPLLTFLWASAVLIILTLGLIYEWLQGGLEWAE
SIO_010081: ND3
subclass of: SO_0000673
so part of: ND3
location: 9650..9998
location: region:9650-9998:1
so has part: feature:9650-9998:1:exon

YP_009112428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9650-9998:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 109905
product: tRNA-Arg
so part of: sequence
location: 9999..10068
location: region:9999-10068:1
so has part: feature:9999-10068:1:region

position:9999:1
position: 9999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10068:1
position: 10068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9999-10068:1:region

ND4L
type: Gene
subclass of: SO_0000704
RO_0002162: 109905
gene: ND4L
so part of: sequence
location: 10069..10365
location: region:10069-10365:1
so has part: feature:10069-10365:1:exon
subclass of: SO_0000010

22549226
type: Gene
SIO_000068: ncbigene

position:10069:1
position: 10069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10365:1
position: 10365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10069-10365:1:exon

ND4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 109905
gene: ND4L
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MTPIQFTFSSAFMLGLAGLAFHRTHLLSALLCLEGMMLSLFIAFSLWALQLDATNFSTSPMLLLAFSACEASAGLALLVATARTHGSDQLKNLNLLQC
SIO_010081: ND4L
subclass of: SO_0000673
so part of: ND4L
location: 10069..10365
location: region:10069-10365:1
so has part: feature:10069-10365:1:exon

YP_009112429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10069-10365:1:exon

ND4
type: Gene
subclass of: SO_0000704
RO_0002162: 109905
gene: ND4
so part of: sequence
location: 10359..11736
location: region:10359-11736:1
so has part: feature:10359-11736:1:exon
subclass of: SO_0000010

22549227
type: Gene
SIO_000068: ncbigene

position:10359:1
position: 10359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11736:1
position: 11736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10359-11736:1:exon

ND4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 109905
gene: ND4
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:11736,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKILAPTLMLIPTVWLTSAKWLWPTALLQSLIIALVSLLWLVNFSETGWSCLNTYMATDPLSTPLLVLTCWLLPLMILASQNHMTHEPLNRQRMLYLLTSLQFLLIMAFSATEIIMFYVMFEATLIPTLILITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLILQNNTGSLSLLIIQYSDPMTMHTYADKLWWASCLLAFLVKMPLYGTHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMLPMLSPLTKELSYPFIILALWGVVMTASICLRQTDLKSLIAYSSVSHMGLVVGAILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMALPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTIALTGAGTLITAGYSLHMFLTTQRGPLPTHIIALEPSHSREHLLMILHLLPLILLILKPELIWGMTS
SIO_010081: ND4
subclass of: SO_0000673
so part of: ND4
location: 10359..11736
location: region:10359-11736:1
so has part: feature:10359-11736:1:exon

YP_009112430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10359-11736:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 109905
product: tRNA-His
so part of: sequence
location: 11737..11807
location: region:11737-11807:1
so has part: feature:11737-11807:1:region

position:11737:1
position: 11737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11807:1
position: 11807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11737-11807:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 109905
product: tRNA-Ser
codon recognized: AGY
so part of: sequence
location: 11808..11875
location: region:11808-11875:1
so has part: feature:11808-11875:1:region

position:11808:1
position: 11808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11875:1
position: 11875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11808-11875:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 109905
product: tRNA-Leu
codon recognized: CUN
so part of: sequence
location: 11882..11954
location: region:11882-11954:1
so has part: feature:11882-11954:1:region

position:11882:1
position: 11882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11954:1
position: 11954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11882-11954:1:region

ND5
type: Gene
subclass of: SO_0000704
RO_0002162: 109905
gene: ND5
so part of: sequence
location: 11955..13793
location: region:11955-13793:1
so has part: feature:11955-13793:1:exon
subclass of: SO_0000010

22549228
type: Gene
SIO_000068: ncbigene

position:11955:1
position: 11955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13793:1
position: 13793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11955-13793:1:exon

ND5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 109905
gene: ND5
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MHPTPLMMTSALIIIFIMLTHPLLTTLTPKPLQKDWALSQVKTAVKLAFFTSLLPMFLFFNEGAETIITTWNWVNTTTFDLNISLKFDHYAIIFTPVALYVTWSILEFASWYMHADPFMDRFFKYLLTFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRVGDIGLILSMAWIAMNLNSWEMQQMFITAKNMDLTIPLLGLIVAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRMSPLLENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGMQFLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSYLNAWALALTLLATSFTAVYSLRVVFFVSMGHPRFNSLSPINENNPKVINPIKRLAWGSIIAGLLITSHVIPMKTPIMTMPPLLKLAALAVTILGLILALELATLTNKQYKVLPLLKTHHFSNMLGFFPALTHRWAPKLNLIFGQMIANQMMDQVWFEKTGPKALTSANLPLITTTSNIQQGTIKAYLSLFLLTITFTTLIFAL
SIO_010081: ND5
subclass of: SO_0000673
so part of: ND5
location: 11955..13793
location: region:11955-13793:1
so has part: feature:11955-13793:1:exon

YP_009112431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11955-13793:1:exon

ND6
type: Gene
subclass of: SO_0000704
RO_0002162: 109905
gene: ND6
so part of: sequence
location: complement(13790..14311)
location: region:13790-14311:-1
so has part: feature:13790-14311:-1:exon
subclass of: SO_0000010

22549229
type: Gene
SIO_000068: ncbigene

position:13790:-1
position: 13790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14311:-1
position: 14311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13790-14311:-1:exon

ND6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 109905
gene: ND6
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MSYLMLMFLVGVVLGLIAVASNPSPFFAALGLVVVAGFGCGVLVGHGGSFLSLILFLVYLGGMLVVFAYSAALAADPYPESLGSRLVAVYMVVYLMVVFLVSGLFWEGWYESFWVSVDEFADFSVFRGDMGGVAVMYSLGGEMLIISAWVLLLTLLVVLELTRGLSRGTIRAV
SIO_010081: ND6
subclass of: SO_0000673
so part of: ND6
location: complement(13790..14311)
location: region:13790-14311:-1
so has part: feature:13790-14311:-1:exon

YP_009112432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13790-14311:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 109905
product: tRNA-Glu
so part of: sequence
location: complement(14312..14380)
location: region:14312-14380:-1
so has part: feature:14312-14380:-1:region

position:14312:-1
position: 14312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14380:-1
position: 14380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14312-14380:-1:region

CYTB
type: Gene
subclass of: SO_0000704
RO_0002162: 109905
gene: CYTB
so part of: sequence
location: 14385..15525
location: region:14385-15525:1
so has part: feature:14385-15525:1:exon
subclass of: SO_0000010

22549230
type: Gene
SIO_000068: ncbigene

position:14385:1
position: 14385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15525:1
position: 15525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14385-15525:1:exon

CYTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 109905
gene: CYTB
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:15525,aa:TERM)
transl table: 2
product: cytochrome b
translation: MAALRKTHPLLKIANNALVDLPAPSNISVWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVTHICRDVNYGWLIRNLHANGASMFFICIYMHIGRGLYYGSYLYKETWNVGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFTFHFLLPFVIAAATMVHLLFLHETGSNNPLGLNSDMDKISFHPYFSYKDLLGFAMLLILLTSLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMVVPILHTSKQRSLTFRPFTQFLFWLLIANVAILTWIGGMPVEHPFIIIGQIASLLYFSLFLIVMPATSWLENKILGWS
SIO_010081: CYTB
subclass of: SO_0000673
so part of: CYTB
location: 14385..15525
location: region:14385-15525:1
so has part: feature:14385-15525:1:exon

YP_009112433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14385-15525:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 109905
product: tRNA-Thr
so part of: sequence
location: 15526..15596
location: region:15526-15596:1
so has part: feature:15526-15596:1:region

position:15526:1
position: 15526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15596:1
position: 15596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15526-15596:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 109905
product: tRNA-Pro
so part of: sequence
location: complement(15596..15665)
location: region:15596-15665:-1
so has part: feature:15596-15665:-1:region

position:15596:-1
position: 15596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15665:-1
position: 15665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15596-15665:-1:region

D-loop
type: Displacement Loop
subclass of: SO_0000297
RO_0002162: 109905
note: control region
so part of: sequence
location: 15666..16497
location: region:15666-16497:1
so has part: feature:15666-16497:1:region

position:15666:1
position: 15666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16497:1
position: 16497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15666-16497:1:region