Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-8, complete sequence.
Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales; Moraxellaceae; Acinetobacter.
Non-baumannii Acinetobacter spp. carrying blaNDM-1 isolated in China
Submitted (17-SEP-2019) College of Veterinary Medicine, South China Agricultural University, 483 Wushan Street, Guangzhou 510642, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP044491.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler v. 0.4.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/26/2023 04:48:06\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,228\nCDSs (total) :: 3,116\nGenes (coding) :: 3,050\nCDSs (with protein) :: 3,050\nGenes (RNA) :: 112\nrRNAs :: 7, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 7, 7, 7 (5S, 16S, 23S)\ntRNAs :: 87\nncRNAs :: 4\nPseudo Genes (total) :: 66\nCDSs (without protein) :: 66\nPseudo Genes (ambiguous residues) :: 0 of 66\nPseudo Genes (frameshifted) :: 27 of 66\nPseudo Genes (incomplete) :: 43 of 66\nPseudo Genes (internal stop) :: 16 of 66\nPseudo Genes (multiple problems) :: 17 of 66\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_005328304.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004969149.1
COORDINATES: similar to AA sequence:RefSeq:WP_005265044.1
COORDINATES: similar to AA sequence:RefSeq:WP_004871868.1
COORDINATES: similar to AA sequence:RefSeq:WP_004856442.1
COORDINATES: similar to AA sequence:RefSeq:WP_004871874.1
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004896916.1
COORDINATES: similar to AA sequence:RefSeq:WP_004973743.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
type II toxin-antitoxin system RelB/DinJ family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_001129137.1
type II toxin-antitoxin system YafQ family toxin