Thermacetogenium phaeum DSM 12270, complete sequence.
type: Entry
definition: Thermacetogenium phaeum DSM 12270, complete sequence.
sequence version: NC_018870.1
sequence date: 2022-12-18
sequence: sequence
division: CON
label: NC_018870.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02603274
keyword: RefSeq
source: Thermacetogenium phaeum DSM 12270
organism: Thermacetogenium phaeum DSM 12270
taxonomy: Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermacetogenium.
reference: 1
references: 23259483
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP003732.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Assembly-Data-START##\nAssembly Method :: Newbler v. v2.6\nSequencing Technology :: Sanger dideoxy sequencing; 454; Illumina\n##Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/18/2022 12:53:08\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,904\nCDSs (total) :: 2,841\nGenes (coding) :: 2,779\nCDSs (with protein) :: 2,779\nGenes (RNA) :: 63\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 50\nncRNAs :: 4\nPseudo Genes (total) :: 62\nCDSs (without protein) :: 62\nPseudo Genes (ambiguous residues) :: 0 of 62\nPseudo Genes (frameshifted) :: 19 of 62\nPseudo Genes (incomplete) :: 41 of 62\nPseudo Genes (internal stop) :: 15 of 62\nPseudo Genes (multiple problems) :: 11 of 62\nCRISPR Arrays :: 11\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000340
sequence length: 2939057
topology: circular
so has quality: SO_0000988
location: 1..2939057
location: region:1-2939057:1
RO_0002162: 1089553

NC_018870
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02603274
type: BioSample
SIO_000068: biosample

1
title: Genome-guided analysis of physiological and morphological traits of the fermentative acetate oxidizer Thermacetogenium phaeum
author: Oehler, D.
author: Poehlein, A.
author: Leimbach, A.
author: Muller, N.
author: Daniel, R.
author: Gottschalk, G.
author: Schink, B.
journal: BMC Genomics 13, 723 (2012)
pubmed: 23259483
comments: Publication Status: Online-Only

23259483
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Poehlein, A.
author: Oehler, D.
author: Mueller, N.
author: Daniel, R.
author: Gottschalk, G.
author: Schink, B.
journal: Submitted (13-JUL-2012) Genomic and Applied Microbiology and Goettingen Genomics Laboratory, Georg-August-University Goettingen, Grisebachstr. 8, Goettingen, Lower Saxony 37077, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2939057:1
position: 2939057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-2939057:1:source
so part of: sequence
organism: Thermacetogenium phaeum DSM 12270
mol type: genomic DNA
strain: DSM 12270
culture collection: DSM:12270
type material: type strain of Thermacetogenium phaeum

1089553
type: Taxonomy
SIO_000068: taxonomy

TPH_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: dnaA
locus tag: TPH_RS00005
old locus tag: Tph_c00010
so part of: sequence
location: 113..1432
location: region:113-1432:1
so has part: feature:113-1432:1:exon
subclass of: SO_0000010

position:113:1
position: 113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1432:1
position: 1432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113-1432:1:exon

TPH_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: dnaA
locus tag: TPH_RS00005
old locus tag: Tph_c00010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011345563.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosomal replication initiator protein DnaA
translation: MLRNKLSEIWKDVLEILQQEVDEHNYSVWLNAASPLAYHDGTLIILTHNDFSREWLETRFSTLIRSRLEYKYNRSFSLRFVTPDSRENILLPSRGENQPSLNPKYTFDTFVVGNSNRLAHAAALAVAEAPSKAYNPLFIYGGVGLGKTHLMHAIGHHVLKNNRNFRVVYVSSETFTNELINAIKDDQNIEFRNKFRNVDVLLVDDIQFLAGKERTQEEFFHTFNTLHEANKQIIISSDRTPKEIPTLEDRLRSRFEWGLLADIQPPDLETREAILRKKAQLENRVVPDEVIRFIASKIKSNIRELEGALLRVIAYASLHQKEITLDLSKEALKDLFAGSRKQNITIGLIQRVVAKHFNLKVEDLKSKRRTQDVAFPRQIAMYLARELTEDSLPVIGREFGGRDHTTVMHACDKIKDRIQQDINTEDTINKLIDMIKTSS
SIO_010081: TPH_RS00005
subclass of: SO_0000673
so part of: TPH_RS00005
location: 113..1432
location: region:113-1432:1
so has part: feature:113-1432:1:exon

WP_028991234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113-1432:1:exon

TPH_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: dnaN
locus tag: TPH_RS00010
old locus tag: Tph_c00020
so part of: sequence
location: 1685..2800
location: region:1685-2800:1
so has part: feature:1685-2800:1:exon
subclass of: SO_0000010

position:1685:1
position: 1685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2800:1
position: 2800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1685-2800:1:exon

TPH_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: dnaN
locus tag: TPH_RS00010
old locus tag: Tph_c00020
EC number: 2.7.7.7
inference: COORDINATES: protein motif:HMM:TIGR00663.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit beta
translation: MKISCRRESLTSALAAACKIVPARPSAPILSGCLIYTDDKGLVVQSTDLEVSLTLWIPAHVEEEGCVVVPVRYLYDLLRRIPDEELSLSWNEESRLLDVTYGSSLSRLHTWMPDDFPPLQARAVGQELNLPAARWKSCACKTLFVVSQQETAFNYSGVYFRFLDEEIHVAATDAYRLALFKMANESSVKGTSILIPGRALGESVKLVEEGENLVITWDDQAVSFSGASFLLTTRLIDSGFPDYEMVIPSDPLLEVQVERKRLLDTLERASLFVSQREHYALACLKVEGDKLTVAAQADEVGSLKETIPLEEGAGNSCEASFNANYLLSPLHVMEQEKVSLSLNGSSGPAVYQEEGDDGSYLHLVSPVCRAS
SIO_010081: TPH_RS00010
subclass of: SO_0000673
so part of: TPH_RS00010
location: 1685..2800
location: region:1685-2800:1
so has part: feature:1685-2800:1:exon

WP_015049180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1685-2800:1:exon

TPH_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00015
old locus tag: Tph_c00030
so part of: sequence
location: 2816..3922
location: region:2816-3922:1
so has part: feature:2816-3922:1:exon
subclass of: SO_0000010

position:2816:1
position: 2816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3922:1
position: 3922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2816-3922:1:exon

TPH_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00015
old locus tag: Tph_c00030
inference: COORDINATES: protein motif:HMM:TIGR00611.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA replication/repair protein RecF
translation: MLSYIKLINFRNYREMEFSPEEGFLVVSGPNGSGKSNLLESIFYLGSGYSNRQVRDEILIRWGESFFSLKGTVVQGGLEYALEIVYSSELRRKVFKINGKRSRPGSAAGILPVVIFSPQDLSLVQGGPVYRRRFLDLLVAQLRPQHSADLLQYRTALLQRNRLLRGSAFAPAELLPWDEQLAAIGARIWRRRIDVLERLLFFCSDSFTSLSGGGVLTGRYLSRVAGGGCASTEDPEYRKNFLKALQRSREVDRRLKATTVGPHRDDFQLLFNGHEARFFSSQGEQRLMALALKMAHYRLLSAERGADPVLLLDDVFSELDERRRRLVFEQIRGGSQVIATMSGMPHGGYSRKEQLTESITLYRFEKRV
SIO_010081: TPH_RS00015
subclass of: SO_0000673
so part of: TPH_RS00015
location: 2816..3922
location: region:2816-3922:1
so has part: feature:2816-3922:1:exon

WP_015049181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2816-3922:1:exon

TPH_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00020
old locus tag: Tph_c00040
so part of: sequence
location: 3950..4210
location: region:3950-4210:1
so has part: feature:3950-4210:1:exon
subclass of: SO_0000010

position:3950:1
position: 3950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4210:1
position: 4210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3950-4210:1:exon

TPH_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00020
old locus tag: Tph_c00040
inference: COORDINATES: protein motif:HMM:NF015958.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF370 domain-containing protein
translation: MFLHIGGEVMVPLNELIAIIDLETGRRREVNCEFLNFAAGEKQVVHVGRPERGKSIVVTKRRIYYSPISVDTLTRRSQLQIAGRPE
SIO_010081: TPH_RS00020
subclass of: SO_0000673
so part of: TPH_RS00020
location: 3950..4210
location: region:3950-4210:1
so has part: feature:3950-4210:1:exon

WP_015049182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3950-4210:1:exon

TPH_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: gyrB
locus tag: TPH_RS00025
old locus tag: Tph_c00050
so part of: sequence
location: 4337..6265
location: region:4337-6265:1
so has part: feature:4337-6265:1:exon
subclass of: SO_0000010

position:4337:1
position: 4337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6265:1
position: 6265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4337-6265:1:exon

TPH_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: gyrB
locus tag: TPH_RS00025
old locus tag: Tph_c00050
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011345558.1
GO component: GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase (ATP-hydrolyzing) subunit B
translation: MVQQNGRERSGCDRDYDAAQIEVLEGMEAVRRRPGMYIGNTGARGLHQLVFELIDNSVDEHLAGYCDLIEITLHRDGSVTVRDNGRGIPVDIHPRTGRPAVEAALTMLHAGGKFGGNGYEISGGLHGVGLSVVNALSRWLLVEVRRDGRRYQQRYERGQVKSPLKDAGAAEGTGTTVRFLPDGQIFSERKFNREYITARVRDLSYLNKGLRFVLVDEVTGDRQEFYHEGGIADFVRSLNKNKEVLHQDPLYFSDKKDGVVIEVALQYHTGYTEGIYSYVNNIHTQEGGTHEAGFKAALTRIINDYAKKSGYLKENMEKLSGEDTREGLTAVLSVKLKEPQFEGQTKTKLGNSEVRGIVESVVSEHLEEFFEENPGPSKLIVEKAVQAARAREAARKARELTRRKTALDHISLPGKLADCTSKDPRECELYIVEGDSAGGSAKQGRDRRFQAILPLRGKIINAEKARLDKMLSNEEIKSIITAVGTGILDDFDLKKARYHRIIIMSDADVDGSHIRTLLLTFFYRYMRPLIEAGYVYIAQPPLYKVQKGKRIEYAYSDRELEKLLRNWKTDNVTIQRYKGLGEMNPEQLWETTMDPERRTMLQVTLTDAMLADEIFTILMGEKVEPRREFIQAHARDVRNLDI
SIO_010081: TPH_RS00025
subclass of: SO_0000673
so part of: TPH_RS00025
location: 4337..6265
location: region:4337-6265:1
so has part: feature:4337-6265:1:exon

WP_015049183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4337-6265:1:exon

TPH_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00030
old locus tag: Tph_c00060
so part of: sequence
location: 6537..9245
location: region:6537-9245:1
so has part: feature:6537-9245:1:exon
subclass of: SO_0000010

position:6537:1
position: 6537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9245:1
position: 9245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6537-9245:1:exon

TPH_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00030
old locus tag: Tph_c00060
EC number: 7.2.2.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009609927.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005388 - P-type calcium transporter activity [Evidence IEA]
GO process: GO:0006816 - calcium ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: calcium-translocating P-type ATPase, SERCA-type
translation: MREKLWHTMEIEDLSTALGTDPERGLSSAEVERRLQEFGPNALKEPPPRSLFSMVLEQLKEVLVLILIVAAVISGVLGEWADSLVILLIVVLNTILGVYQERKAEQALQALKRMTRPTAKVVRGGVVGEVELESLVPGDVVLLDAGDSVPADIRLTAAVSLRMNESSLTGESVPVEKDVGVLPEEEVPLGDRKNMAYMGTTVTAGHGCGIVVVTGMNTQIGRIAQLIQEAPQEVTPLQRRLAELGKVLGIGAGVLVLVVFLAGVRQGMDVLGMFMIAISLAVAAVPEGLPAVVTVVLALGVTRMSRRRAVVRRLSAVETLGTVTVICSDKTGTLTKNEMTVVHLYTEGRMLRVTGAGYRPVGDFVDEQETAVDPAADKNLRLLLLGGLLASDACLENGENGYRIIGDPTEGALVVAAAKAGIVREEAEREHPRLAEIPFDSDRKMMTTFNKIEDGVWSFTKGAPDVVLERCTGILQEGEFRPLDEVSKRRLLSVNSELASRGERVLALAARLWPDVPANPTSENAERDLIFLGYFAMQDPPRPEVRKAVDVCKRAGIRTVMITGDHLETAVAIARALGIWQEGNGALSGDRLQKMDDRQLEREVNRITVYARVSPEDKLRIVAALKAHNHIVAMTGDGVNDAPALKRADIGVSMGITGTEVAKEASDMVLLDDNFATIVNAVREGRTIYSNIRKSIQYLLSCNIGEIVAIFTAVLLGQGSPLTAIQILWLNLVTDSLPALALGVEPPENGVMEQPPRDPQEGVLSGGVGWNILWQGTMIGLISLAVYLLALSQGRTLEEAHTMTFATMALVQLVHSFNIRSFRDSLFTIGIGTNRYHLSAFAISLSLQGVVLFIPFLRGFFDTVMLRPGDWLTVLGFSLIPLLVVETTKAFGRLKQGRLQTG
SIO_010081: TPH_RS00030
subclass of: SO_0000673
so part of: TPH_RS00030
location: 6537..9245
location: region:6537-9245:1
so has part: feature:6537-9245:1:exon

WP_015049184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6537-9245:1:exon

TPH_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00035
old locus tag: Tph_c00080
so part of: sequence
location: complement(9777..9965)
location: region:9777-9965:-1
so has part: feature:9777-9965:-1:exon
subclass of: SO_0000010

position:9777:-1
position: 9777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9965:-1
position: 9965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9777-9965:-1:exon

TPH_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00035
old locus tag: Tph_c00080
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: transposase
translation: MSAIPFVMAFPSQRREAFIKGHIRAFEFFGVVPKRLIYDNLRTAVKEGWGKDVKKKQKDFLV
SIO_010081: TPH_RS00035
subclass of: SO_0000673
so part of: TPH_RS00035
location: complement(9777..9965)
location: region:9777-9965:-1
so has part: feature:9777-9965:-1:exon

WP_015049186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9777-9965:-1:exon

TPH_RS16125
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS16125
so part of: sequence
location: 10442..10996
location: region:10442-10996:1
so has part: feature:10442-10996:1:exon
subclass of: SO_0000010

position:10442:1
position: 10442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10996:1
position: 10996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10442-10996:1:exon

TPH_RS16125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS16125
inference: COORDINATES: protein motif:HMM:NF015558.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative sulfate exporter family transporter
translation: MTTKSLTATDSSQGLGLVQGMVLTLILALVARELSTLPILNIMGSMVLAILLGFTWRSLMGIPETAAVGVNYASKQILRYGIILMGLRLDIPGILAAGPQAILLDILAILIAITVITFLGKKAGLNKRLATLIAIGTGVCGAAAIAAAAPVIKARDDETAVSVAIIALLGTLFTIYLYASLPLT
SIO_010081: TPH_RS16125
subclass of: SO_0000673
so part of: TPH_RS16125
location: 10442..10996
location: region:10442-10996:1
so has part: feature:10442-10996:1:exon

WP_248642566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10442-10996:1:exon

TPH_RS16130
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS16130
so part of: sequence
location: 10908..11468
location: region:10908-11468:1
so has part: feature:10908-11468:1:exon
subclass of: SO_0000010

position:10908:1
position: 10908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11468:1
position: 11468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10908-11468:1:exon

TPH_RS16130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS16130
inference: COORDINATES: protein motif:HMM:NF015558.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative sulfate exporter family transporter
translation: MTKQLYLWPSSLCWELYLPYIYTLLYPLLNLTQFQYGLFSGSTLHELAHVIAAAQPGGAASVDLALLVKLGRVALLVPVVLLLGVIFISENKTEAAENWRQLPVPWFIFGFLAFSAINTAQILPSFLTTTLIQGGVFLLTMAMAGLGLNVSLEMIKKVGTKSLGVGLAGSLILSITGWLVISHLAN
SIO_010081: TPH_RS16130
subclass of: SO_0000673
so part of: TPH_RS16130
location: 10908..11468
location: region:10908-11468:1
so has part: feature:10908-11468:1:exon

WP_248642565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10908-11468:1:exon

TPH_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00050
old locus tag: Tph_c00110
so part of: sequence
location: complement(11503..12087)
location: region:11503-12087:-1
so has part: feature:11503-12087:-1:exon
subclass of: SO_0000010

position:11503:-1
position: 11503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12087:-1
position: 12087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11503-12087:-1:exon

TPH_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00050
old locus tag: Tph_c00110
inference: COORDINATES: protein motif:HMM:NF015431.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR substrate-binding domain-containing protein
translation: MAGYYKQKYPEVEITSLIANTQEIVQRVLAHELDLGVIEGQVEHPDLIQEDIFQDELVIIVSPRHPWAERGEITLEELKSEPIILREEGSGTRQVAAEGLKKVGVKLWSLKVAMELGSTQAIKEAVEAGLGVAIISRLAIKKESRNNLLREVRLQGVDFKRMLRVAYSRHKFRSPAAEAFLDLLLSKEAFKVLD
SIO_010081: TPH_RS00050
subclass of: SO_0000673
so part of: TPH_RS00050
location: complement(11503..12087)
location: region:11503-12087:-1
so has part: feature:11503-12087:-1:exon

WP_236608888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11503-12087:-1:exon

TPH_RS15515
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15515
so part of: sequence
location: complement(12104..12412)
location: region:12104-12412:-1
so has part: feature:12104-12412:-1:exon
subclass of: SO_0000010

position:12104:-1
position: 12104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12412:-1
position: 12412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12104-12412:-1:exon

TPH_RS15515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15515
inference: COORDINATES: protein motif:HMM:NF012354.2
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MLDTQLLVFKTVAEQKSFSLAARVLHMTQPAISIHVQTLEDYFGTRLLDRTNRRVSLTEAGRVLYHYAVQLSRLYDEARKAVAEVSGKVKGKLIIGATLNYW
SIO_010081: TPH_RS15515
subclass of: SO_0000673
so part of: TPH_RS15515
location: complement(12104..12412)
location: region:12104-12412:-1
so has part: feature:12104-12412:-1:exon

WP_049886046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12104-12412:-1:exon

TPH_RS14480
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS14480
pseudo: true
so part of: sequence
location: complement(<12737..12916)
location: region:12737-12916:-1
so has part: feature:12737-12916:-1:exon
subclass of: SO_0000010

position:12737:-1
position: 12737
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:12916:-1
position: 12916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12737-12916:-1:exon

TPH_RS14480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS14480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015050566.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: TPH_RS14480
subclass of: SO_0000673
so part of: TPH_RS14480
location: complement(<12737..12916)
location: region:12737-12916:-1
so has part: feature:12737-12916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12737-12916:-1:exon

TPH_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: gyrA
locus tag: TPH_RS00065
old locus tag: Tph_c00130
so part of: sequence
location: 13208..15655
location: region:13208-15655:1
so has part: feature:13208-15655:1:exon
subclass of: SO_0000010

position:13208:1
position: 13208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15655:1
position: 15655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13208-15655:1:exon

TPH_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: gyrA
locus tag: TPH_RS00065
old locus tag: Tph_c00130
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011345557.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA gyrase subunit A
translation: MPTIGSVSPVDINEEVKKSYLDYAMSVIVGRALPDVRDGLKPVHRRILYAMFDAGITPDKPHKKSAVVVGNVLARFHPHGDAAVYDALVRLAQDFSCRYPLVDGHGNFGSIDGDAPAAMRYTEVRLAPLALQMLADIDQETVDFVPNYDDSQKEPAVLPSRIPNLLVNGSSGIAVGMATNIPPHNLREVIDGLVYLIDHPEASVADLMQYIPGPDFPSGGSILGLNGIKEAYETGRGALVVRGRAEIEKTSGGRSQIVITELPFQVNKARLVERIAELVREKKLDGISDLRDESDRSGMRVVLELRREANPRVILNRLYKHTKLQDTFGVIMLALVDGTPRILNLKELLSHYLEHQVTVVRRRSQYQLRRAEERLHIVDGLVIALDHIDAVISLIRRSHTDEEARRGLMGNFQLSEKQAQAILDMRLRRLTGLEREKVLEEKRELEERIAGLKELLSNESLIRGVVRQELLEVREKFGDDRRTLIAEKAPEVRKEDIIPEELVVITLTRRGYIKRIPLNTYRGQHRGGRGITALTTRDEDFVEQLFAASTHHFLLFFTNKGKVYRLKVYDIPEGSRQAKGTALVNLLPLAADEVVTAVIPLRQFRDDRYLLMATRQGLVKKGLLSDYDSSRRDGIIALRLHPGDELIGVRLSEGREEIILATKKGMALCFNEEDVRVMGRAASGVLGIRLDPGDEVVGMDRFREGSQVLVVTERGYGKRTPAADYRVQKRGGRGLITLKVTDRNGCLAGVKVVDDRDEILLMSSEDSMIRIRVGEIPVQGRNTQGVKLMRLKEDERLVAVAKLPSNSIEGMEKVN
SIO_010081: TPH_RS00065
subclass of: SO_0000673
so part of: TPH_RS00065
location: 13208..15655
location: region:13208-15655:1
so has part: feature:13208-15655:1:exon

WP_015049187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13208-15655:1:exon

TPH_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: pdxS
locus tag: TPH_RS00070
old locus tag: Tph_c00140
so part of: sequence
location: 15746..16630
location: region:15746-16630:1
so has part: feature:15746-16630:1:exon
subclass of: SO_0000010

position:15746:1
position: 15746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16630:1
position: 16630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15746-16630:1:exon

TPH_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: pdxS
locus tag: TPH_RS00070
old locus tag: Tph_c00140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011345556.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyridoxal 5'-phosphate synthase lyase subunit PdxS
translation: MEAKGTWNVKKGLAEMLKGGVIMDVTTPEQAKIAEEAGACAVMALERVPADIRAAGGVARMADPDVILRIMDAVTIPVMAKARIGHFVEAQILEALGVDYIDESEVLTPADESYHIDKHQFKVPFVCGARDLGEALRRIGEGAAMIRTKGEAGTGNIVEAVRHMRTVQDQIRWLQGLPQEELMAAAKKLGAPYELVKEVAASGRLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSADPPKRAKAIVAAVTHYRDPQVLAEVSRGLGEAMRGLELSAIAPEERLADRGW
SIO_010081: TPH_RS00070
subclass of: SO_0000673
so part of: TPH_RS00070
location: 15746..16630
location: region:15746-16630:1
so has part: feature:15746-16630:1:exon

WP_015049188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15746-16630:1:exon

TPH_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: pdxT
locus tag: TPH_RS00075
old locus tag: Tph_c00150
so part of: sequence
location: 16634..17209
location: region:16634-17209:1
so has part: feature:16634-17209:1:exon
subclass of: SO_0000010

position:16634:1
position: 16634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17209:1
position: 17209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16634-17209:1:exon

TPH_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: pdxT
locus tag: TPH_RS00075
old locus tag: Tph_c00150
EC number: 3.5.1.2
EC number: 4.3.3.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012818165.1
GO function: GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
GO process: GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyridoxal 5'-phosphate synthase glutaminase subunit PdxT
translation: MRVGVLAMQGAFREHVDAFRRCGCEAMEVRTREELDEVAALAIPGGESTAITKLLRSFGLWEALLKRGAEDLPILATCAGVIVLARGIVGSDQVSLGLLDVAVRRNAYGRQVDSFETELKIEALGTEPVPAIFIRAPIIESVGPKVEVLATYREKAVLVRQGRILAATFHPELTADLRLHQYFLEMAEGKR
SIO_010081: TPH_RS00075
subclass of: SO_0000673
so part of: TPH_RS00075
location: 16634..17209
location: region:16634-17209:1
so has part: feature:16634-17209:1:exon

WP_028991231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16634-17209:1:exon

misc_binding
type: Miscellaneous Binding Site
subclass of: SO_0000409
RO_0002162: 1089553
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00230
inference: COORDINATES: profile:INFERNAL:1.1.1
note: T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: tRNA
so part of: sequence
location: 17266..17493
location: region:17266-17493:1
so has part: feature:17266-17493:1:region

position:17266:1
position: 17266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17493:1
position: 17493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17266-17493:1:region

TPH_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00080
old locus tag: Tph_c00160
so part of: sequence
location: 17546..18703
location: region:17546-18703:1
so has part: feature:17546-18703:1:exon
subclass of: SO_0000010

position:17546:1
position: 17546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18703:1
position: 18703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17546-18703:1:exon

TPH_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00080
old locus tag: Tph_c00160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012818166.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alanine--glyoxylate aminotransferase family protein
translation: MEEKQYLMLPGPTPVPPRVLRALAKPMINHRGPEFKTLLSEITAGLKEVFRTENDIIIYPSAGTGGMEAAVANFISPGEKVLVVSIGNFGDRFAEIARRFGARVEKMDFAWGTAADPAALEERLKEDKDKEIKAVFVTHNETSTGVTNDLKALRKAAGEHPALFIVDSVSGLGAMELETDGWNLDVVVAGSQKSFMIPPGLSFIAVSRRAWEAAEKCTNARYYWDIREARKYAEKGQTPYTPALPQLTALAESLRMIKEEGLPRIIARHRRLRDMVRAGVRALGLELLVKDEIASNAVTAVCAPAGIEADAIRRLLRERYGVIVAGGQNKLKNKIFRIGHLGYVCETDILATLAALEMALIGCGFKANLGQGVRAAQEVALAATQ
SIO_010081: TPH_RS00080
subclass of: SO_0000673
so part of: TPH_RS00080
location: 17546..18703
location: region:17546-18703:1
so has part: feature:17546-18703:1:exon

WP_015049190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17546-18703:1:exon

TPH_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: serA
locus tag: TPH_RS00085
old locus tag: Tph_c00170
so part of: sequence
location: 18732..20327
location: region:18732-20327:1
so has part: feature:18732-20327:1:exon
subclass of: SO_0000010

position:18732:1
position: 18732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20327:1
position: 20327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18732-20327:1:exon

TPH_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: serA
locus tag: TPH_RS00085
old locus tag: Tph_c00170
EC number: 1.1.1.95
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012818167.1
GO function: GO:0004617 - phosphoglycerate dehydrogenase activity [Evidence IEA]
GO process: GO:0006564 - L-serine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoglycerate dehydrogenase
translation: MNGARPKILVGDKIVDEALEMLRAEADVDVRIGIGQPELEEIIENYDALIVRSIPLVTEEVIRRGKRLKVVGRAGNGVDNIDVAAATRHGVVVVNTPDSNSFSAGEHTIALMLASARNLPQAHQTVKDGGWGRSRFMGNELYGKTVGIVGLGRIGSFVATRLKAFNMRVIAYDPYIPLERFKRFGAERMETLNDLVRQSDFITVHTPKTEETIGMIGMEQFRIAKKGVRVVNCARGGIIDEEALAWALKEGIVASAALDVFTKEPCTGNPLLEFDNVVVTPHIGATTFEAQHRVGTDLANYVLSALKGEIVPNTVNLPCLLGEEIDTMRPFLELAEYLGRLYYQLEKVPAERVELIYNGEIARKETGILTLAFLKGLLSPVMGDQVNLVNASWLAENRGIKVCERRDEVSKTGHVSLISVIFTGAGRRVEYAGTLAWDQSPRIVRVNGYQLDVVPTPYMLFVEHIDRPGVIGPFASALGEADINIAMMQVARTVKGEVALMILSVDSPVDESTLRRVRQLKGIINVKVVFM
SIO_010081: TPH_RS00085
subclass of: SO_0000673
so part of: TPH_RS00085
location: 18732..20327
location: region:18732-20327:1
so has part: feature:18732-20327:1:exon

WP_015049191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18732-20327:1:exon

TPH_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: serS
locus tag: TPH_RS00090
old locus tag: Tph_c00180
so part of: sequence
location: 20406..21683
location: region:20406-21683:1
so has part: feature:20406-21683:1:exon
subclass of: SO_0000010

position:20406:1
position: 20406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21683:1
position: 21683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20406-21683:1:exon

TPH_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: serS
locus tag: TPH_RS00090
old locus tag: Tph_c00180
EC number: 6.1.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012818168.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine--tRNA ligase
translation: MLDLKFIRSHPEVVKKALSDRNVEFDLDQVLAWDEERRSKIAESERLKNRRNTLSQEVGRLKAAKEDAAHLIEEVREISRRSKEIDRELNEIEQKLQQALLLIPNIPHESVPVGPDEGANIVLRVEGEPPSFGFEPRPHWEIGENLDILDFERGVKVAGARFTVLKGWGARLERALVNFMLDLHTEEHGYTEIFPPFLVNRATMTGTGQLPKFEEDLFYCNREDLFLIPTAEVPVTNLYSDEILPGEVLPIYHTAYTACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTTPEDSYLELEKLTADAEDVLRRLGLAYRVVSLSTGDLGFSAAKTYDLEVWFPAAGTYREISSCSNFEDFQARRANIRYRPEAGARPRFVHTLNGSGVAVGRTVAAILENYQREDGSVVVPEVLRPYMGIDVITGSR
SIO_010081: TPH_RS00090
subclass of: SO_0000673
so part of: TPH_RS00090
location: 20406..21683
location: region:20406-21683:1
so has part: feature:20406-21683:1:exon

WP_015049192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20406-21683:1:exon

TPH_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00095
old locus tag: Tph_c00190
so part of: sequence
location: 21807..21896
location: region:21807-21896:1
so has part: feature:21807-21896:1:exon
subclass of: SO_0000663

position:21807:1
position: 21807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21896:1
position: 21896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21807-21896:1:exon

TPH_RS00095
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1089553
locus tag: TPH_RS00095
old locus tag: Tph_c00190
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.9
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:21841..21843,aa:Ser,seq:tga)
SIO_010081: TPH_RS00095
subclass of: SO_0000673
so part of: TPH_RS00095
location: 21807..21896
location: region:21807-21896:1
so has part: feature:21807-21896:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21807-21896:1:exon

TPH_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00100
old locus tag: Tph_c00200
so part of: sequence
location: 21954..22030
location: region:21954-22030:1
so has part: feature:21954-22030:1:exon
subclass of: SO_0000663

position:21954:1
position: 21954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22030:1
position: 22030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21954-22030:1:exon

TPH_RS00100
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1089553
locus tag: TPH_RS00100
old locus tag: Tph_c00200
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.9
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:21988..21990,aa:Arg,seq:acg)
SIO_010081: TPH_RS00100
subclass of: SO_0000673
so part of: TPH_RS00100
location: 21954..22030
location: region:21954-22030:1
so has part: feature:21954-22030:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21954-22030:1:exon

TPH_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00105
old locus tag: Tph_c00210
so part of: sequence
location: 22047..22142
location: region:22047-22142:1
so has part: feature:22047-22142:1:exon
subclass of: SO_0000663

position:22047:1
position: 22047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22142:1
position: 22142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22047-22142:1:exon

TPH_RS00105
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1089553
locus tag: TPH_RS00105
old locus tag: Tph_c00210
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.9
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:22082..22084,aa:Ser,seq:gct)
SIO_010081: TPH_RS00105
subclass of: SO_0000673
so part of: TPH_RS00105
location: 22047..22142
location: region:22047-22142:1
so has part: feature:22047-22142:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22047-22142:1:exon

TPH_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00110
old locus tag: Tph_c00220
so part of: sequence
location: 22151..22227
location: region:22151-22227:1
so has part: feature:22151-22227:1:exon
subclass of: SO_0000663

position:22151:1
position: 22151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22227:1
position: 22227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22151-22227:1:exon

TPH_RS00110
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1089553
locus tag: TPH_RS00110
old locus tag: Tph_c00220
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.9
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:22185..22187,aa:Arg,seq:cct)
SIO_010081: TPH_RS00110
subclass of: SO_0000673
so part of: TPH_RS00110
location: 22151..22227
location: region:22151-22227:1
so has part: feature:22151-22227:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22151-22227:1:exon

TPH_RS15795
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15795
old locus tag: Tph_c00230
so part of: sequence
location: complement(22354..22737)
location: region:22354-22737:-1
so has part: feature:22354-22737:-1:exon
subclass of: SO_0000010

position:22354:-1
position: 22354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22737:-1
position: 22737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22354-22737:-1:exon

TPH_RS15795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15795
old locus tag: Tph_c00230
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTEMRLFCVCQRWAFNRLLEGVSRYEIKKVGQELFGLNSRHTDDARLRAQALLDSQKDLLGLETEETEKKLGSARHQAINSCNRPSTFKIFGLSHIVQGYPPDKPTSVRSPMFRVPLSASFRPHRCR
SIO_010081: TPH_RS15795
subclass of: SO_0000673
so part of: TPH_RS15795
location: complement(22354..22737)
location: region:22354-22737:-1
so has part: feature:22354-22737:-1:exon

WP_236608802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22354-22737:-1:exon

TPH_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00120
old locus tag: Tph_c00240
so part of: sequence
location: complement(22829..23011)
location: region:22829-23011:-1
so has part: feature:22829-23011:-1:exon
subclass of: SO_0000010

position:22829:-1
position: 22829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23011:-1
position: 23011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22829-23011:-1:exon

TPH_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00120
old locus tag: Tph_c00240
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEIEVTSQEEPKDAHTELVQDLLAIVTSFSGRLYGSRGSRKIRRSFRELIRDAEAEAQEG
SIO_010081: TPH_RS00120
subclass of: SO_0000673
so part of: TPH_RS00120
location: complement(22829..23011)
location: region:22829-23011:-1
so has part: feature:22829-23011:-1:exon

WP_015049194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22829-23011:-1:exon

TPH_RS14490
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: rpmH
locus tag: TPH_RS14490
old locus tag: Tph_c00250
so part of: sequence
location: 23207..23341
location: region:23207-23341:1
so has part: feature:23207-23341:1:exon
subclass of: SO_0000010

position:23207:1
position: 23207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23341:1
position: 23341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23207-23341:1:exon

TPH_RS14490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: rpmH
locus tag: TPH_RS14490
old locus tag: Tph_c00250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003397591.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L34
translation: MKRTYQPKRRRRKRVHGFLKRMRTPGGRKIIRRRRTKGRRVLSA
SIO_010081: TPH_RS14490
subclass of: SO_0000673
so part of: TPH_RS14490
location: 23207..23341
location: region:23207-23341:1
so has part: feature:23207-23341:1:exon

WP_081578536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23207-23341:1:exon

TPH_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: rnpA
locus tag: TPH_RS00125
old locus tag: Tph_c00260
so part of: sequence
location: 23363..23710
location: region:23363-23710:1
so has part: feature:23363-23710:1:exon
subclass of: SO_0000010

position:23363:1
position: 23363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23710:1
position: 23710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23363-23710:1:exon

TPH_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: rnpA
locus tag: TPH_RS00125
old locus tag: Tph_c00260
EC number: 3.1.26.5
inference: COORDINATES: protein motif:HMM:TIGR00188.1
GO function: GO:0004526 - ribonuclease P activity [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease P protein component
translation: MLRKELRLRKNADFKNVYENGRSVAGRYVSIYYIKRGDQKGTRIGIVAGKKVGGAVTRNRVKRVLREILSHYQDLLCEEHDIVVVARKRLLTAEFHKISADVGNILKGCGLLKGM
SIO_010081: TPH_RS00125
subclass of: SO_0000673
so part of: TPH_RS00125
location: 23363..23710
location: region:23363-23710:1
so has part: feature:23363-23710:1:exon

WP_015049196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23363-23710:1:exon

TPH_RS14495
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: yidD
locus tag: TPH_RS14495
so part of: sequence
location: 23782..24030
location: region:23782-24030:1
so has part: feature:23782-24030:1:exon
subclass of: SO_0000010

position:23782:1
position: 23782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24030:1
position: 24030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23782-24030:1:exon

TPH_RS14495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: yidD
locus tag: TPH_RS14495
inference: COORDINATES: protein motif:HMM:NF013932.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: membrane protein insertion efficiency factor YidD
translation: MINRLIICLIKVYQKLWSSWHPPVCRFYPTCSEYSIQALNEYRLSYAVILIIYRLLRCHPLSSGGFDPLPRDKNRFLKKSRR
SIO_010081: TPH_RS14495
subclass of: SO_0000673
so part of: TPH_RS14495
location: 23782..24030
location: region:23782-24030:1
so has part: feature:23782-24030:1:exon

WP_236608835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23782-24030:1:exon

TPH_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00130
old locus tag: Tph_c00270
so part of: sequence
location: 24069..24758
location: region:24069-24758:1
so has part: feature:24069-24758:1:exon
subclass of: SO_0000010

position:24069:1
position: 24069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24758:1
position: 24758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24069-24758:1:exon

TPH_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00130
old locus tag: Tph_c00270
inference: COORDINATES: protein motif:HMM:TIGR03592.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YidC/Oxa1 family membrane protein insertase
translation: MWNNIVQGFSEIIQAFYLATVWMKIPSYGLAIILFTIAVKIVLFPLTRLQMNSMRAMQELQPKIKEIQERYKNKPEKAQQAVMQLYKEKGVNPMSGCLPLLIQMPIIFALFSSLRLFFDPKLHPPYVDLTKAGFLWIENLGQPDPIILPLLTVVVTFAQQFFTSMTASGKIDPTQRTMLIIMPLFIGWIARTLPAGLTLYWVVFSLFSAVETLVIRRMSGVAKGAGSKA
SIO_010081: TPH_RS00130
subclass of: SO_0000673
so part of: TPH_RS00130
location: 24069..24758
location: region:24069-24758:1
so has part: feature:24069-24758:1:exon

WP_015049197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24069-24758:1:exon

TPH_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00135
old locus tag: Tph_c00280
so part of: sequence
location: 24755..25399
location: region:24755-25399:1
so has part: feature:24755-25399:1:exon
subclass of: SO_0000010

position:24755:1
position: 24755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25399:1
position: 25399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24755-25399:1:exon

TPH_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00135
old locus tag: Tph_c00280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011393997.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein jag
translation: MKEMIVEGSSVEEAVEKALKELSVGRDDVEIEVLEEGSRGFLGIIGVKSARVRVRVVDQPDVVIRSFLKEVFDKMELDVEQRIWFEDGYWRVELCGTDIRHLIGRHGETLNALQLLANLAVSKRLQERVRIILDAEGYREKREKVLRKLARRVADRVKRTKRDYTLEPMPPQERRIIHLELQDEKNVYTVSRGQEPYRRLAVCYKRDGLLKEEK
SIO_010081: TPH_RS00135
subclass of: SO_0000673
so part of: TPH_RS00135
location: 24755..25399
location: region:24755-25399:1
so has part: feature:24755-25399:1:exon

WP_015049198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24755-25399:1:exon

TPH_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: mnmE
locus tag: TPH_RS00140
old locus tag: Tph_c00290
so part of: sequence
location: 25523..26920
location: region:25523-26920:1
so has part: feature:25523-26920:1:exon
subclass of: SO_0000010

position:25523:1
position: 25523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26920:1
position: 26920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25523-26920:1:exon

TPH_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: mnmE
locus tag: TPH_RS00140
old locus tag: Tph_c00290
inference: COORDINATES: protein motif:HMM:TIGR00450.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
translation: MMERIEEGDLIAALGTALGEAAIGIVRMSGRGAVELVDRFFQPFRKGQNLLKTPSHSMRLGYIRNEDGEVIDEVLVSVMRGPHTYTREDVVEINCHGGILPIKRVLDLLLKNGARLAEPGEFTKRAFLNGRIDLAQAEAVLDVIRARSEKGAEIALRQLSGGLSREIGGMRDELKSILAWVEAEIDFPEDVDQIPVDKLMERIDALIARVDGYIEGSRAGRIYREGLKTVLVGKPNVGKSTLLNTLLGEERALVTDIPGTTRDIIEEAINLEGIPLILMDTAGIRGKAGVVERLGIDRTRAAVEEADIVLALFDVTSELSEEDRDVLELIKDKRGVVLLNKIDLKERRLDVDLIRERLGSSYVFLEISARLGWGRKELGEAVLNVVGVSKLAPESAVLTRRRQLEVMERVRESLVGAKCGIRGGMPPECVAIDLWDAWTQLGQILGDTESEDVIDEIFREFCIGK
SIO_010081: TPH_RS00140
subclass of: SO_0000673
so part of: TPH_RS00140
location: 25523..26920
location: region:25523-26920:1
so has part: feature:25523-26920:1:exon

WP_028991228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25523-26920:1:exon

TPH_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: rsmG
locus tag: TPH_RS00145
old locus tag: Tph_c00300
so part of: sequence
location: 26942..27718
location: region:26942-27718:1
so has part: feature:26942-27718:1:exon
subclass of: SO_0000010

position:26942:1
position: 26942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27718:1
position: 27718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26942-27718:1:exon

TPH_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: rsmG
locus tag: TPH_RS00145
old locus tag: Tph_c00300
EC number: 2.1.1.170
inference: COORDINATES: protein motif:HMM:TIGR00138.1
GO component: GO:0005575 - cellular_component [Evidence IEA]
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
GO process: GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
translation: MTRGMQKLVAGARELGLEIEGWMQERFQIYAELIRSWNRRINLVRLQNEENLFSSHFLDSLWCSRGCELVAVGRLLDIGSGAGFPAVPLKICFPHLQVVMVESQAKRCRFLEEVIDALRLEGCRVIWERSENLARDPNHRETYDCVTARALAALPVVLELGVPFLKRGGHLLAMKGRSIQEELGQSAFAMSVLGVRLERIVPYVFEGEEGRHIVSFVKEERTPEDYPRRAGIPEKRPLLRRGIGGDAVEKKMKCNART
SIO_010081: TPH_RS00145
subclass of: SO_0000673
so part of: TPH_RS00145
location: 26942..27718
location: region:26942-27718:1
so has part: feature:26942-27718:1:exon

WP_015049200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26942-27718:1:exon

TPH_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00150
old locus tag: Tph_c00310
so part of: sequence
location: 27705..28550
location: region:27705-28550:1
so has part: feature:27705-28550:1:exon
subclass of: SO_0000010

position:27705:1
position: 27705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28550:1
position: 28550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27705-28550:1:exon

TPH_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00150
old locus tag: Tph_c00310
inference: COORDINATES: protein motif:HMM:TIGR00180.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MHGHRGMVLEMLFGGGRKGDREVVKIPLQSIRCGRFQPRFNIDEESLKELAESIKNVGVLQPIVVRPCDGGYELIAGERRVRASMMAGLQEVPAVIKEVSDAEAMEMALMENVQRRNLHFFEEAEGFRRLIEQFNLTQVEVAERMGLSQSAVANKLRLLRLSPEVREQVYRLGLSERHARALLELEDSRAQLKVLGMAAVRDYRVGEWEELIRREKHKNISREIKKGRKQNVVPKIRDLRIFMNSLERGVKMMRSAGLNVRLSHEEDNGVLRIVIEVDTGV
SIO_010081: TPH_RS00150
subclass of: SO_0000673
so part of: TPH_RS00150
location: 27705..28550
location: region:27705-28550:1
so has part: feature:27705-28550:1:exon

WP_148275794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27705-28550:1:exon

TPH_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00155
old locus tag: Tph_c00320
so part of: sequence
location: 28543..29121
location: region:28543-29121:1
so has part: feature:28543-29121:1:exon
subclass of: SO_0000010

position:28543:1
position: 28543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29121:1
position: 29121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28543-29121:1:exon

TPH_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00155
old locus tag: Tph_c00320
inference: COORDINATES: protein motif:HMM:NF015639.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YkgJ family cysteine cluster protein
translation: MSEKVRIWWDETYECYDVGVLSDDAAVGDVERVGELVLSGRAARRRYGSSCNGCCICCGGRIPLTPGDISRMMRAGLGAGMSVGEWLSRYCRIDDLGPCLDVTLKCIDDICCLWDRKRSICSLYEARPFVCRTYICAPFSRRLDELRSQIVNYGEDLLEEMIVKGDFDGNKFTGIPLRNICSKELWGWLRDM
SIO_010081: TPH_RS00155
subclass of: SO_0000673
so part of: TPH_RS00155
location: 28543..29121
location: region:28543-29121:1
so has part: feature:28543-29121:1:exon

WP_015049202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28543-29121:1:exon

TPH_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00160
old locus tag: Tph_c00330
so part of: sequence
location: 29380..30189
location: region:29380-30189:1
so has part: feature:29380-30189:1:exon
subclass of: SO_0000010

position:29380:1
position: 29380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30189:1
position: 30189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29380-30189:1:exon

TPH_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00160
old locus tag: Tph_c00330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011393993.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MRPTVENKGFPSDRGQAKTIAIANQKGGVAKTTTAINLSACLAATGRRVLLVDADPQGNATSGLGVDRDGLDVSVYDLLLGEAQPERVVVSLQIENLDLLPATINLAGAEVELVGMKDREFRLRSALQSLRGRYHYIFIDCPPSLGLLTINALTAADRILIPIQCEYYALEGVGQLLQTVNLVRRRLNPQLELEGVLLTMFDARTNLAIQVVDEVKNYFGDKVFRTVIPRNVRLSEAPSHGKPVIAYDPRSRGAILYQELAQEVIEHEE
SIO_010081: TPH_RS00160
subclass of: SO_0000673
so part of: TPH_RS00160
location: 29380..30189
location: region:29380-30189:1
so has part: feature:29380-30189:1:exon

WP_236608836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29380-30189:1:exon

TPH_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00165
old locus tag: Tph_c00340
so part of: sequence
location: 30179..31036
location: region:30179-31036:1
so has part: feature:30179-31036:1:exon
subclass of: SO_0000010

position:30179:1
position: 30179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31036:1
position: 31036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30179-31036:1:exon

TPH_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00165
old locus tag: Tph_c00340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009610974.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MKSKGLGRGLKALIPTTPEGAAEDAEIVELPLERITPSRYQARQDFDEDSIRELASSIKEHGVMQPVVVRPVGEDLYELVVGERRWRACRQAGLETIPAVIRRVDDRTSGEMMLVENIQREDLNPVEEALAYRRLIEEFHLTQEEVASRVGKSRSFIANSLRLLQLPEGVRSLLGQGKLSVGHGKVLLGIPDPAGQEMLAREIVEKGLTVRDAEKAVQRLLKEGGSRQKAGEKKKDVELAAVEDRLRERLGTKVRIRPGRRGGRIEIEYYGRDDLERLLEFFFGC
SIO_010081: TPH_RS00165
subclass of: SO_0000673
so part of: TPH_RS00165
location: 30179..31036
location: region:30179-31036:1
so has part: feature:30179-31036:1:exon

WP_015049204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30179-31036:1:exon

TPH_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00170
old locus tag: Tph_c00350
so part of: sequence
location: 31273..32484
location: region:31273-32484:1
so has part: feature:31273-32484:1:exon
subclass of: SO_0000010

position:31273:1
position: 31273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32484:1
position: 32484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31273-32484:1:exon

TPH_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00170
old locus tag: Tph_c00350
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRFLLGVNYWPAKRAMYWWRDFHAAEVRDDFRRLAALGFQVVRIFLLWEDFQPSPGGLSPLCLERLVAVADAAADCRMVIQPTFFCGHMSGANWAPEWLLGRPLRGRFPVVSGGRPRSREIRNYYGERWIIKEQQRQCREVARALRGHPALWSYDLGNEPSNFVVPGDRQAAREWLAAVAGELKEVADCPVTIGLHAEDLQEDRKLWPADAALYCDYLSMHGYPFYLDWVDHPLDVEVLPFLGVLTRWLGGKDVLFQEFGVSDLVLWRECPKAAEEAGVLYYRRALRLLQAAGMLGAFAWCYSDYHPDLFGITPLRENPHERFFGLFAADGRPKKAAGAVREFAERIKDDGGCCRDGAAVPSWLQGEDAGRFCDNPLSELRRLYRSFKGSRELKEWRRVLDGR
SIO_010081: TPH_RS00170
subclass of: SO_0000673
so part of: TPH_RS00170
location: 31273..32484
location: region:31273-32484:1
so has part: feature:31273-32484:1:exon

WP_148275796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31273-32484:1:exon

TPH_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: larC
locus tag: TPH_RS00175
old locus tag: Tph_c00360
so part of: sequence
location: complement(32518..33744)
location: region:32518-33744:-1
so has part: feature:32518-33744:-1:exon
subclass of: SO_0000010

position:32518:-1
position: 32518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33744:-1
position: 33744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32518-33744:-1:exon

TPH_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: larC
locus tag: TPH_RS00175
old locus tag: Tph_c00360
inference: COORDINATES: protein motif:HMM:TIGR00299.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nickel pincer cofactor biosynthesis protein LarC
translation: MKIIYLDCFSGISGDMCLAALLDLGMPLECLQEAVERLGIPVAVEEKTVHKGAIRAKGIAVRELRPQPPARSLSAVLEIVTKSSLPEEIKAKTEACLRRLAAAEAAVHGTPPEKVHFHEVGGLDTLVDLAGTFIGIAHLKVEHLYASPLPLARGSIKTAHGLIPLPAPAALELLSGVPTYGVNLEAELVTPTGAALVTALASSFGPPPPAVWERVGYGAGSSDLEWPNVLRAWLGEERMSDQRAEKGAGAFEEGRILVLETQVDDTNPEFLPYLRSRLEEAGAVDVSFTPLLMKKGRPGFQVTVLSSAERLYALARIIFQETSSLGLRWRQEGRIMLFRTTIGVETPYGRIPVKIGYTLAPDGSREVFNRAPEYEDCARAAREHGVGIKEVYRSALAALVKIEDAQEI
SIO_010081: TPH_RS00175
subclass of: SO_0000673
so part of: TPH_RS00175
location: complement(32518..33744)
location: region:32518-33744:-1
so has part: feature:32518-33744:-1:exon

WP_015049206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32518-33744:-1:exon

TPH_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: larB
locus tag: TPH_RS00180
old locus tag: Tph_c00370
so part of: sequence
location: complement(33741..34502)
location: region:33741-34502:-1
so has part: feature:33741-34502:-1:exon
subclass of: SO_0000010

position:33741:-1
position: 33741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34502:-1
position: 34502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33741-34502:-1:exon

TPH_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: larB
locus tag: TPH_RS00180
old locus tag: Tph_c00370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011025167.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
GO process: GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nickel pincer cofactor biosynthesis protein LarB
translation: MDRSSLKKLLTDVRDGRTSVEEAFAKIRHLPYEDIGAAKIDHHRALRRGFPEVIFCQGKTPEQALAAFRELAGHNGRVLATRVSPETASLIKTELPEAQYRPEARILFLSRTEIKPRWGRIAVLSAGTSDLPVAEEAALTAELLENEVSRIYDVGVAGIHRLFSHLEELERARVLIVVAGMEGALPGVVAGLTDRPVIAVPTSTGYGASFGGLSALLTMLNTCSPGVGVVNIDNGFGAAVLAHLITRSGDEKP
SIO_010081: TPH_RS00180
subclass of: SO_0000673
so part of: TPH_RS00180
location: complement(33741..34502)
location: region:33741-34502:-1
so has part: feature:33741-34502:-1:exon

WP_015049207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33741-34502:-1:exon

TPH_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00185
old locus tag: Tph_c00380
so part of: sequence
location: 34757..35260
location: region:34757-35260:1
so has part: feature:34757-35260:1:exon
subclass of: SO_0000010

position:34757:1
position: 34757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35260:1
position: 35260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34757-35260:1:exon

TPH_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00185
old locus tag: Tph_c00380
inference: COORDINATES: protein motif:HMM:NF025935.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4446 family protein
translation: MDGIPFLQGDGALLTALGALSLLCLLLIFFNLRLLLWNRRLQRLLRGGGESLDELLRETLVSCREAKAELNELRQWCRELEQGVAKSLRRVGFLRFNAFSDKGSELSFALALLNNDGDGIVLCCLVGRDDCRLFAKPVVGGTSPYPLSDEEKAAIRMASRSEATAAN
SIO_010081: TPH_RS00185
subclass of: SO_0000673
so part of: TPH_RS00185
location: 34757..35260
location: region:34757-35260:1
so has part: feature:34757-35260:1:exon

WP_015049208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34757-35260:1:exon

TPH_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00190
old locus tag: Tph_c00390
so part of: sequence
location: 35281..36216
location: region:35281-36216:1
so has part: feature:35281-36216:1:exon
subclass of: SO_0000010

position:35281:1
position: 35281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36216:1
position: 36216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35281-36216:1:exon

TPH_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00190
old locus tag: Tph_c00390
inference: COORDINATES: protein motif:HMM:NF013700.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M23 family metallopeptidase
translation: MPGKLFLRGRRFLTRPFTFVVVPPGGARTKAVRLPCWLLACAGLLFAGLAALSLSGLIGGYRARSERDELLKLRLVNERQQRELASLREEAEEARAYLEGVKELDERVRRMTGLLERREDYSSRSGSRDSARRLRLSTSAAEEDPAEVRRNLSAVQRVAAMARRDLEQLERDLQEHFKYLAALPDHWPVRGEVTSGFGERPSPFGGGRSEFHDGLDLAAEYGAPVAAAGDGVVVFTGYRPGYGHTVVIEHGYGYKTSYCHLSGYLVRAGERVTKGQRIALAGNSGRSTGPHLHFMVEKDGVLIDPLQVLKE
SIO_010081: TPH_RS00190
subclass of: SO_0000673
so part of: TPH_RS00190
location: 35281..36216
location: region:35281-36216:1
so has part: feature:35281-36216:1:exon

WP_015049209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35281-36216:1:exon

TPH_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00195
old locus tag: Tph_c00400
so part of: sequence
location: 36718..37146
location: region:36718-37146:1
so has part: feature:36718-37146:1:exon
subclass of: SO_0000010

position:36718:1
position: 36718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37146:1
position: 37146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36718-37146:1:exon

TPH_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00195
old locus tag: Tph_c00400
inference: COORDINATES: protein motif:HMM:NF016408.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polymer-forming cytoskeletal protein
translation: MAWLRKDGLKLNESAETILGRGASFEGTLETEGSVRIDGRFRGAVRSAGDVVIGEGAAVEAELKGRNVLIAGLVRGNVDAEAKLEITPKGKLYGNFQASRLLVEEGALIRGECLMNGGSPLPEDASAGEEGVPSASEGAPIE
SIO_010081: TPH_RS00195
subclass of: SO_0000673
so part of: TPH_RS00195
location: 36718..37146
location: region:36718-37146:1
so has part: feature:36718-37146:1:exon

WP_015049210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36718-37146:1:exon

TPH_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00200
old locus tag: Tph_c00410
so part of: sequence
location: 37243..37482
location: region:37243-37482:1
so has part: feature:37243-37482:1:exon
subclass of: SO_0000010

position:37243:1
position: 37243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37482:1
position: 37482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37243-37482:1:exon

TPH_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00200
old locus tag: Tph_c00410
inference: COORDINATES: protein motif:HMM:NF015643.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YkuS family protein
translation: MAFVAVEDELGNVRSALEDAGYRVVGMNPADLRRAQAVVVSGMDIDMLQQEDIRTDVPVINAAGLSAEEIVAAVRERLK
SIO_010081: TPH_RS00200
subclass of: SO_0000673
so part of: TPH_RS00200
location: 37243..37482
location: region:37243-37482:1
so has part: feature:37243-37482:1:exon

WP_015049211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37243-37482:1:exon

TPH_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: yyaC
locus tag: TPH_RS00205
old locus tag: Tph_c00420
so part of: sequence
location: complement(37558..38169)
location: region:37558-38169:-1
so has part: feature:37558-38169:-1:exon
subclass of: SO_0000010

position:37558:-1
position: 37558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38169:-1
position: 38169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37558-38169:-1:exon

TPH_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: yyaC
locus tag: TPH_RS00205
old locus tag: Tph_c00420
inference: COORDINATES: protein motif:HMM:NF018564.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: spore protease YyaC
translation: MIFGLKPQNILSRQETRVSVHDRNAAGDLAAFLTGLLGELNPSSFRPVVLLGIGTDRSTGDSLGPLVGSRVNELAPGLLPVFGTLDDPVHAVNLAEKTEAIQNAFPFPLIIAVDASLGQPQNVGAITIGRGHLKPGTGVHKDLPPVGDIFITGVVNIGGYLEYLVLQNTRLGLVMKMADCIARAVILGCEQVRKKQKQPERLS
SIO_010081: TPH_RS00205
subclass of: SO_0000673
so part of: TPH_RS00205
location: complement(37558..38169)
location: region:37558-38169:-1
so has part: feature:37558-38169:-1:exon

WP_015049212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37558-38169:-1:exon

TPH_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: selA
locus tag: TPH_RS00210
old locus tag: Tph_c00430
so part of: sequence
location: 38332..39774
location: region:38332-39774:1
so has part: feature:38332-39774:1:exon
subclass of: SO_0000010

position:38332:1
position: 38332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39774:1
position: 39774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38332-39774:1:exon

TPH_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: selA
locus tag: TPH_RS00210
old locus tag: Tph_c00430
EC number: 2.9.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011393981.1
GO function: GO:0004125 - L-seryl-tRNASec selenium transferase activity [Evidence IEA]
GO process: GO:0016260 - selenocysteine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-seryl-tRNA(Sec) selenium transferase
translation: MDKRDRLRQLPAVHELVNRCSGAGCPTHLLTAAARQVLERWRKKILENGIDPPAPGELAAETAALVRSRLSPSLRPVINATGVVLHTNLGRAPLSEAACQAVAAVAGGYCNLEIDLETGSRGERYSHVEELLCDLTGAQAALVVNNNAAAVFLALHVLARGREVVVGRGELVEIGGSFRVPEIMAQSGAILREVGTTNKTYPRDYERAIGPETALLLKVHPSNYRVVGFTREVSRQELVAIGRSYRIPVMEDAGSGVFFDLLEFREAGESLIGESLAAGVDLVTCSGDKLLGGPQAGIIVGRADLVQALKESPLLRVLRVDKMTLAALEATLRLYLEGKAEEAVPVLRMISLKNSEIERRAIFLKEMLSASLGEECKLEIMPGSSRVGGGSLPLAELPTTLLSLRPGKMTAASLAGRLRRGDPPVIVRIWEDRVIIDPRTLAPGEEEQLAAALKAALRGEPGTPAGEEKAGGESDWIPLS
SIO_010081: TPH_RS00210
subclass of: SO_0000673
so part of: TPH_RS00210
location: 38332..39774
location: region:38332-39774:1
so has part: feature:38332-39774:1:exon

WP_015049213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38332-39774:1:exon

TPH_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: selB
locus tag: TPH_RS00215
old locus tag: Tph_c00440
so part of: sequence
location: 39756..41663
location: region:39756-41663:1
so has part: feature:39756-41663:1:exon
subclass of: SO_0000010

position:39756:1
position: 39756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41663:1
position: 41663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39756-41663:1:exon

TPH_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: selB
locus tag: TPH_RS00215
old locus tag: Tph_c00440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011393980.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0001514 - selenocysteine incorporation [Evidence IEA]; GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: selenocysteine-specific translation elongation factor
translation: MDSFIIIGTAGHVDHGKTWLVKALTGVDTDRLKEEKERGISIELGFAPLRLPGGIHAGVVDVPGHERFVKNMLAGAGGIDMVLFVVAADEGVMPQTREHLDILELLRVQKGVVALTKVDLVDEEWLLLVEEDVRELLKPTHFRHAPIVPVSSVTGAGLKELLDALAGVAAEVNPKPRTGEARLPIDRVFTITGFGTVLTGTLFSGTLHTGDALEIMPSGLRGRVRSLQVHGQKVEEAGAGQRVAVNLTGVEVGQVKRGDVLVTPGAFPAVRRVAAALHLLERAPHPLKNYQRIRFHLGTKEALGRVRLLDRDELRPGDDAVVQIELEEAVVAAVHDRYVIRQYSPVTTIGGGEIIECGGKRYKRFRPEVLRQLELKLTGSPSARVAGELRAATAHLSLADLSGRTGLGEAEVREILHELQREGDALLFEFGGETLAVPFALYEEWLGKVKEVLSAYHSRYPLRSGFPKEELRSRHFKFLPARLYQALLDRWAAAGEVVVNGQNLVMPGFNPSPTPEQAALIDRLRAELSACPFSPPGPEEILRLLENDGELLQYCLQTGVLVKAGEELYFLRDAVEQAWNILEAHLREHQEMTVATARDLLGTSRRYCLPLLEHFDRLKKTRRIGDKRMLYFQKN
SIO_010081: TPH_RS00215
subclass of: SO_0000673
so part of: TPH_RS00215
location: 39756..41663
location: region:39756-41663:1
so has part: feature:39756-41663:1:exon

WP_015049214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39756-41663:1:exon

TPH_RS16135
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS16135
so part of: sequence
location: 41778..41909
location: region:41778-41909:1
so has part: feature:41778-41909:1:exon
subclass of: SO_0000010

position:41778:1
position: 41778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41909:1
position: 41909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41778-41909:1:exon

TPH_RS16135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS16135
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVGIRAAKRRLLSFWKERLGKVRAEKERGSDALYKEFCRCIK
SIO_010081: TPH_RS16135
subclass of: SO_0000673
so part of: TPH_RS16135
location: 41778..41909
location: region:41778-41909:1
so has part: feature:41778-41909:1:exon

WP_269077475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41778-41909:1:exon

TPH_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00220
old locus tag: Tph_c00450
so part of: sequence
location: 42031..43233
location: region:42031-43233:1
so has part: feature:42031-43233:1:exon
subclass of: SO_0000010

position:42031:1
position: 42031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43233:1
position: 43233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42031-43233:1:exon

TPH_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00220
old locus tag: Tph_c00450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011345120.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MRLWRRKGKALAVITALVFVLSVFAAGCGSQGTEKTQGAAGDTIKIGVNYELSGNVATYGTSCKNGILLAFEEINAKGGVLGKKIEPLVQDNKSDNAESLSVATKLVSQGIVAMIGPATTGNVMAEEPVLTDAKIPLLATAATAPQVTFDEEKNKVRDFVFRICIIDPDQALVMANFVADELKLKNGAIMVDTTNDYSKGLGENFKEYFTAKGGKIVAEEGFVSTDNAFRAQLTRIAAKKPDFIYVPAYYNQVSLIIKQARELGIDVPFMGADGWDSPELVNIAEAKSLNGCYFTNHYSVEDPSPKIQDFVKAYQKKYNVIPDAFAALGYDAGYLMAAAIEKAGEADPIKIRQALEEIEDFEGVTGKLSFDEKHNPVKEVSIIKMVDGKQQLVTKLMPRQ
SIO_010081: TPH_RS00220
subclass of: SO_0000673
so part of: TPH_RS00220
location: 42031..43233
location: region:42031-43233:1
so has part: feature:42031-43233:1:exon

WP_015049215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42031-43233:1:exon

TPH_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00225
old locus tag: Tph_c00460
so part of: sequence
location: 43319..44194
location: region:43319-44194:1
so has part: feature:43319-44194:1:exon
subclass of: SO_0000010

position:43319:1
position: 43319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44194:1
position: 44194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43319-44194:1:exon

TPH_RS00225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00225
old locus tag: Tph_c00460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015907856.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid ABC transporter permease
translation: MQDLLQQLLNGLSLGSIYALIAVGYTMVYGIVQLINFAHGDVMMVGAYVALGAALLGLGFVPSLVLAMIVCSLLGVVIERVAYRPVRPVSRLAALTSAIGVSLFLEYAVMFVLSPKVWTYPAILKERIFRVGGIVITSKDLLVLGTTLVLVVILQYIIYRTRIGKAMRAVSFDGTAAQLMGVNVNSTVGVTFAIGSAMAAAAGLLIGLYFNTVQPLMGLMPGLKAFIAAVLGGIGSVPGAMLGGILLGMTEALVSGFGGSMYRDAVAFGILILILLIRPTGLLGKGIQEKA
SIO_010081: TPH_RS00225
subclass of: SO_0000673
so part of: TPH_RS00225
location: 43319..44194
location: region:43319-44194:1
so has part: feature:43319-44194:1:exon

WP_015049216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43319-44194:1:exon

TPH_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00230
old locus tag: Tph_c00470
so part of: sequence
location: 44204..45172
location: region:44204-45172:1
so has part: feature:44204-45172:1:exon
subclass of: SO_0000010

position:44204:1
position: 44204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45172:1
position: 45172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44204-45172:1:exon

TPH_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00230
old locus tag: Tph_c00470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004397425.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid ABC transporter permease
translation: MQKRWSANIALIFVLVVIFAAVQVGIDSGLLSDYLLTSVFLIGINIILASSLNLINGFTGEFSLGHAGFMAVGAYVGAVITVKLGLPFPLAIICGMLATALAGLLVGLPTLRLKGDYLAIATLGFGEIIRVILVNIEYVGGARGILGIPRVVNWPILFCAVVLSVLLIRNFICSTHGRACLAIRENDLAASMMGINVTFYKVLAFVIGASLAGLAGVLYAHYFYIIQPAKFSFLLTFDVLVMVMVGGLGSLTGSVVGAVLLTILSTALQAIPELRMVLYALLLITSAVFRPQGLLGEKELTLHIFKRWGGVFGAAAHREQAQ
SIO_010081: TPH_RS00230
subclass of: SO_0000673
so part of: TPH_RS00230
location: 44204..45172
location: region:44204-45172:1
so has part: feature:44204-45172:1:exon

WP_015049217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44204-45172:1:exon

TPH_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00235
old locus tag: Tph_c00480
so part of: sequence
location: 45141..45926
location: region:45141-45926:1
so has part: feature:45141-45926:1:exon
subclass of: SO_0000010

position:45141:1
position: 45141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45926:1
position: 45926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45141-45926:1:exon

TPH_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00235
old locus tag: Tph_c00480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015312259.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MPLLTVNRLNKSFGGLVALNNFNLNVEEGELVGLIGPNGAGKTTVFNLLTGLYQPTSGSIVFEGRDLKGKPPHLITKMGIARTFQNIRLFGNLSVLDNVKIAYQSVLNYGLIPAFFRVPPYSRRESEIEKEALGLLEIMHLERYAAEKAKNLPYGEQRRLEIARALATKPRLLLLDEPAAGMNPQETQELLSLIRWIRERFGLTIILIEHDMSLVMGLCERVLVLNYGSLIAEGTPQEIQQNPKVIEAYLGVDEGVTAWEE
SIO_010081: TPH_RS00235
subclass of: SO_0000673
so part of: TPH_RS00235
location: 45141..45926
location: region:45141-45926:1
so has part: feature:45141-45926:1:exon

WP_015049218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45141-45926:1:exon

TPH_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00240
old locus tag: Tph_c00490
so part of: sequence
location: 45914..46639
location: region:45914-46639:1
so has part: feature:45914-46639:1:exon
subclass of: SO_0000010

position:45914:1
position: 45914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46639:1
position: 46639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45914-46639:1:exon

TPH_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00240
old locus tag: Tph_c00490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011345114.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MGGIKQPVLSLEDVNVHYGAIWALKGVNLTVGEGEIISLIGANGAGKTTTLRAISGIVRATSGRITFRGEDITRMAAHDIVKRGIAQVPEGRRVFANLTVIENLEMGAYIRNDKQGIKEDLERVLERFPRLKERRNQIAGTLSGGEQQMLAIGRALMTRPSLMLLDEPSMGLAPLLVKEIFAIIEEINREGTTILLVEQNARMALQIAERAYVLETGRIVLEGPAKELSRREEVKKAYLGG
SIO_010081: TPH_RS00240
subclass of: SO_0000673
so part of: TPH_RS00240
location: 45914..46639
location: region:45914-46639:1
so has part: feature:45914-46639:1:exon

WP_015049219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45914-46639:1:exon

TPH_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00245
old locus tag: Tph_c00500
so part of: sequence
location: 46679..47323
location: region:46679-47323:1
so has part: feature:46679-47323:1:exon
subclass of: SO_0000010

position:46679:1
position: 46679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47323:1
position: 47323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46679-47323:1:exon

TPH_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00245
old locus tag: Tph_c00500
inference: COORDINATES: protein motif:HMM:NF012780.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CBS domain-containing protein
translation: MRDKMTPNPVTITPQTTIAEALTLMREGKFRRLPVLDRGKLVGIVTDRDLSEVSPSPATSLSIFELNYLLARTKIDTIIKKQKVISISPDAYLEEAALMMRDNEIGAIPVVEDGKLLGIITESDIFDAFIELMGLRDPGTRLELELEDKPGMLVRVSEIVWKNGGDISHLAVFHERLGRATLVLQLRTTNAEDIVKALKEEGISVKSAAWKGHA
SIO_010081: TPH_RS00245
subclass of: SO_0000673
so part of: TPH_RS00245
location: 46679..47323
location: region:46679-47323:1
so has part: feature:46679-47323:1:exon

WP_236608837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46679-47323:1:exon

TPH_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00250
old locus tag: Tph_c00510
so part of: sequence
location: 47411..47507
location: region:47411-47507:1
so has part: feature:47411-47507:1:exon
subclass of: SO_0000663

position:47411:1
position: 47411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47507:1
position: 47507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47411-47507:1:exon

TPH_RS00250
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1089553
locus tag: TPH_RS00250
old locus tag: Tph_c00510
product: tRNA-Sec
inference: COORDINATES: profile:tRNAscan-SE:2.0.9
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:47445..47447,aa:Sec,seq:tca)
SIO_010081: TPH_RS00250
subclass of: SO_0000673
so part of: TPH_RS00250
location: 47411..47507
location: region:47411-47507:1
so has part: feature:47411-47507:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47411-47507:1:exon

TPH_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00255
old locus tag: Tph_c00520
so part of: sequence
location: 47860..49539
location: region:47860-49539:1
so has part: feature:47860-49539:1:exon
subclass of: SO_0000010

position:47860:1
position: 47860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49539:1
position: 49539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47860-49539:1:exon

TPH_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00255
old locus tag: Tph_c00520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015051459.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MSSARERKGISRRTFIKGAAIGAVGAASLGMLAGCGEKEPKEQVQAPVDEARKPSFLTPPEPIPDSEIKETVNTDVVVVGAGFAGLCAAVRAGQLGAKVVLLEKNNIPGFRGYDYGAVNSKAQLSVGNRIDPVKITREIMRFGGYKGDQKVVSLFAEYSGEANDWLLDMATELGCTYTVWKPEDCTIPDTTIETFPTLTFVLDPPEEALEVMPKGTLPPTAAMAWVLLTNAKKVGVDVRFNTPAVQLIRPNNKGRVTGIIAKNKDGSYTRFNVTKGVVLCAGDYGNDPEMLKEYIPHAVGFMNLYNSKANTGDGHKMGLWVGAAIDEPPHAPMLFDIGMVEEPGLADSLMRQPWLSVNIRGERFMNEDLPYAYISNAVRQQPGGTRWTVWDSKWPEEAPKFRMTACKSLKSLFHDPKRVEELIKKGVIKSANTVEELAQKMKVPVETFKATVERYNELARKGVDEDFHKRAVCLTTIEKPPLYAAHLATALLVTLGGLRVNEKLQVLDKDLNVIPGLYAAGNNSGSYYANDYCVTMPGNSHGRAYTQGYLAGKYVVELG
SIO_010081: TPH_RS00255
subclass of: SO_0000673
so part of: TPH_RS00255
location: 47860..49539
location: region:47860-49539:1
so has part: feature:47860-49539:1:exon

WP_015049221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47860-49539:1:exon

TPH_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00260
old locus tag: Tph_c00530
so part of: sequence
location: complement(49670..51784)
location: region:49670-51784:-1
so has part: feature:49670-51784:-1:exon
subclass of: SO_0000010

position:49670:-1
position: 49670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51784:-1
position: 51784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49670-51784:-1:exon

TPH_RS00260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00260
old locus tag: Tph_c00530
inference: COORDINATES: protein motif:HMM:NF025885.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma 54-interacting transcriptional regulator
translation: MRKPLVQMLSPMIKNRDRLVKQTLDKSDVLLMEKIKKSKLEILHNSFSPTPNDLVRPVVNESWIRSRNYNLKLFDYNYGPTLDGAAFEELLREKGLLLKAADPYLLNLETMLSHTSCMVLLSDEEGVMLRVLIGNQKLFKKINKRFQLSPGVIWTEKTIGTCAHGISLLLGIPMQICGPEHYSEKFGQISCSSAPIFDVNDNLAATLSIVSPYLQNSHFLSLAISTAWAIQNEYRLALNRELFDTALEATDEAVIIINRRGIITRANAAARKTLDFWGRDLIGMPIEDILGKQPLVDFVLKMGEPVKDAEIESERLNRRLCFSAQPQKDHNGNNFGCVLTLKEIERGRRREKPTGQAQAAFTFDKIVGSSPQIIKSIETAKRFARLDVNILIQGESGTGKELFAQAIHNESRPEGPFIAINCAAIPKNLIASELFGYEGGAFTGADRQGRPGKIELANGGTLFLDEIGDMPLELQPVILRAIEEKRIMRIGGKRYIPVDFRLITATNKNLLDLVKNKQFREDLYYRLKVLELKIPPLRERGPDTVRLAKHFIALAAQKLQIPAPSLSDEAVFHLLKYSWPGNVRELENAMFHAVSMSRNGVIEPGDLPEEIGASPARCPVKDHTGLELIADSRIAAAPNLSLKEIEKITIIQALLQTQYNISEAAKILGMSRSTLYRKIRDNGLKFITLNRNTRPKALGQSQPR
SIO_010081: TPH_RS00260
subclass of: SO_0000673
so part of: TPH_RS00260
location: complement(49670..51784)
location: region:49670-51784:-1
so has part: feature:49670-51784:-1:exon

WP_015049222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49670-51784:-1:exon

TPH_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00265
so part of: sequence
location: 51744..52076
location: region:51744-52076:1
so has part: feature:51744-52076:1:exon
subclass of: SO_0000010

position:51744:1
position: 51744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52076:1
position: 52076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51744-52076:1:exon

TPH_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00265
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIIGLSICTKGFLIPITLLMLAVRLNTHLETFAGQGRAKGEHPELFCQGFEDAVSEVSANEGADFVDLSLLSSLFVLIILLPSLRGDFMLPEGKSLKFRSASAGIFQFQY
SIO_010081: TPH_RS00265
subclass of: SO_0000673
so part of: TPH_RS00265
location: 51744..52076
location: region:51744-52076:1
so has part: feature:51744-52076:1:exon

WP_148275799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51744-52076:1:exon

TPH_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00270
old locus tag: Tph_c00540
so part of: sequence
location: 52258..53478
location: region:52258-53478:1
so has part: feature:52258-53478:1:exon
subclass of: SO_0000010

position:52258:1
position: 52258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53478:1
position: 53478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52258-53478:1:exon

TPH_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00270
old locus tag: Tph_c00540
inference: COORDINATES: protein motif:HMM:NF037653.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MSIATEGQRQLELVERVLDEGLPFVASYLKRVLNRPVIITDSSGRIHYPEVEAGRTEEAFVEIPSGIGVNEFYYRQGDGCLFYHIGSNGASAFVIVRDLPPEVVARTASVLKGARLAVKCCFASFHKFAKSGERFERELREYFLQKNASDVREIFMSSGKDLNINIPYTAAVMEAEEAEGGIDWGLVGSYSREYLKKTGSDVIPVALPTGLVFVVPNPYADGVFETGVNWSGSVGRSRCKEFIEKTFSMKTSIGIGQPYPLSDLYKSYQEACLTLILLRVMGKKGFVREFSELGVFSFLFSQGLSSVKSFCLKTLGPLIEDDGNSTAVLLPTLRSLVDHGFNRSAAAKSLYVHINTLHYRLSKIEKLINADLSQPDVRANLYIAVKAWDALCQWRRKRGFFAPETV
SIO_010081: TPH_RS00270
subclass of: SO_0000673
so part of: TPH_RS00270
location: 52258..53478
location: region:52258-53478:1
so has part: feature:52258-53478:1:exon

WP_028991223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52258-53478:1:exon

TPH_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00275
old locus tag: Tph_c00550
so part of: sequence
location: complement(53903..54313)
location: region:53903-54313:-1
so has part: feature:53903-54313:-1:exon
subclass of: SO_0000010

position:53903:-1
position: 53903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54313:-1
position: 54313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53903-54313:-1:exon

TPH_RS00275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00275
old locus tag: Tph_c00550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013297378.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PIN domain-containing protein
translation: MNVLIDTNVILDAMLSRSPFKEAAEKLFLLAAEDKIEACITASSITDIYYLLKKYLKNDDHCKEALLKLFALFKILDVTGTDCEKALELAMPDYEDALLAVCAKRNKMDFIITRNLKDFTNAPVKIISPDDFLSTL
SIO_010081: TPH_RS00275
subclass of: SO_0000673
so part of: TPH_RS00275
location: complement(53903..54313)
location: region:53903-54313:-1
so has part: feature:53903-54313:-1:exon

WP_015049224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53903-54313:-1:exon

TPH_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00280
old locus tag: Tph_c00560
so part of: sequence
location: complement(54297..54524)
location: region:54297-54524:-1
so has part: feature:54297-54524:-1:exon
subclass of: SO_0000010

position:54297:-1
position: 54297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54524:-1
position: 54524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54297-54524:-1:exon

TPH_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00280
old locus tag: Tph_c00560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013297379.1
GO process: GO:0008219 - cell death [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system prevent-host-death family antitoxin
translation: MIVTATEFKKNLGKYLTLAAKEDIYITKNGKSIAKLTSPIHDKVEMAKSLFGILPADASLEQAREERLSRHERVD
SIO_010081: TPH_RS00280
subclass of: SO_0000673
so part of: TPH_RS00280
location: complement(54297..54524)
location: region:54297-54524:-1
so has part: feature:54297-54524:-1:exon

WP_015049225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54297-54524:-1:exon

TPH_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00285
old locus tag: Tph_c00570
so part of: sequence
location: complement(54723..54932)
location: region:54723-54932:-1
so has part: feature:54723-54932:-1:exon
subclass of: SO_0000010

position:54723:-1
position: 54723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54932:-1
position: 54932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54723-54932:-1:exon

TPH_RS00285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00285
old locus tag: Tph_c00570
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDLGEVFMKLFEKPEMEVRNCENCNSGIITSNGIVCCIDKKQECLPDGSYKYWTPLVVIGEEDLEDEA
SIO_010081: TPH_RS00285
subclass of: SO_0000673
so part of: TPH_RS00285
location: complement(54723..54932)
location: region:54723-54932:-1
so has part: feature:54723-54932:-1:exon

WP_015049226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54723-54932:-1:exon

TPH_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00290
old locus tag: Tph_c00580
so part of: sequence
location: complement(55196..55570)
location: region:55196-55570:-1
so has part: feature:55196-55570:-1:exon
subclass of: SO_0000010

position:55196:-1
position: 55196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55570:-1
position: 55570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55196-55570:-1:exon

TPH_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00290
old locus tag: Tph_c00580
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIALPPSLRERKRSAQPIKKGVMLMATFWEEHRDDSLCADCGGKCCYVYGPPYNMTRERLHEDKHGVHGGGYYKNYGVEPLSQKIHPHACEYLSPSGCIIPWEKRPPICKNYRCGLWRDLVFRR
SIO_010081: TPH_RS00290
subclass of: SO_0000673
so part of: TPH_RS00290
location: complement(55196..55570)
location: region:55196-55570:-1
so has part: feature:55196-55570:-1:exon

WP_028991222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55196-55570:-1:exon

TPH_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00295
old locus tag: Tph_c00590
so part of: sequence
location: 55722..56264
location: region:55722-56264:1
so has part: feature:55722-56264:1:exon
subclass of: SO_0000010

position:55722:1
position: 55722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56264:1
position: 56264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55722-56264:1:exon

TPH_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00295
old locus tag: Tph_c00590
inference: COORDINATES: protein motif:HMM:NF014001.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA 2'-phosphotransferase
translation: MDHVRLSKLVAYALRHAPQEFGLRLDEEGWAPVSDLLAALHRRGWSDLDVRGLQEMIRSAEKKRFEMAGGKIRALYGHSRSQRVVKEPAFPPEILYHGTARRFLPSIKENGLLPGRRQYVHLSVDVPTALEVGRRHDSRPVILRVWARRACDAGVKFFLGNDRIWLAEAVPAGYLEFPQG
SIO_010081: TPH_RS00295
subclass of: SO_0000673
so part of: TPH_RS00295
location: 55722..56264
location: region:55722-56264:1
so has part: feature:55722-56264:1:exon

WP_015049228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55722-56264:1:exon

TPH_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00300
old locus tag: Tph_c00600
so part of: sequence
location: 56435..59155
location: region:56435-59155:1
so has part: feature:56435-59155:1:exon
subclass of: SO_0000010

position:56435:1
position: 56435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59155:1
position: 59155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56435-59155:1:exon

TPH_RS00300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00300
old locus tag: Tph_c00600
inference: COORDINATES: protein motif:HMM:NF015644.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UPF0182 family protein
translation: MDGRKRLVRLLFVVLALVLGDRALNVWADYEWFKSLGYQGVFWTLFSTRFVVGAAVFLVLFAFFQLNFRCLRRCLPPHRVYDLHGGRILAAMVNPLHRLITSDAGKYLFTVLSVALSLIYAVSLGARFEVIQKFVYAVPFGRTDPIFGRDAAFYVFKLPFYELLQSSLASAFIVALFLCAFVYLLLASGEFLHGGWRFFSPVKLHLGSLIAGLLVLKAWDYHLSVYRLLVGGSGAFPGAGYTDIHARLPAYQILAVLAVLVAVLVFVGIFKGRVLPVAAGAAVLAAASLLLGAVYPAFVQKFQVEPNEFAREEPYIEYGLDATRFAFGLDDVRSVSTAAADAGAGGLDGETLEKSAGLLRNLRLWDFRPLQQVYNQLQQLRRYYVFADVDVDRYRLGDQYRQVMLAVRELNQENLPERAGTWVNRRLQYTHGYGVVMSPANEVTDAGLPVMLLKNIPPAASSPEIEVKRPEIYFGELTGNMVVVNTRAGEFSHPSGERNVYTNYEGQGGVRLTPIKRLLYALHFRDLRLLLSSEITPQSRILYNRTVQDARRLAPYLRYDGDPYPVVDGGRIYWILDAYTVAGHYPYSAARNGINYVRNSVKVVVDAYEGDISFYTSDPSDPVVGTYSRIYPGLYRPLSEMPAGLRAHLRYPEDLFKMQADVFAEYHVRDARVFYNREDEWEVPKEKYSDASRQMEPYYVIMQLPGEEEEEFLLILPFTPMKRGNAVAWLAARCDGEHYGELVLDVFPKDVHAYGPMQVEASIDQDADISAQLTLWNQHGSQVIRGNLLTVPLAGKLLYVKPLFLQAEESAMPELIRVIAFYDGRVVMEKDLQGALDRLFGRAEQPPEQGAATPQAPGDSSALARRAWQLYQEAGERLRAGDWSGYGKAIEELGQVLKEMAGETGR
SIO_010081: TPH_RS00300
subclass of: SO_0000673
so part of: TPH_RS00300
location: 56435..59155
location: region:56435-59155:1
so has part: feature:56435-59155:1:exon

WP_015049229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56435-59155:1:exon

TPH_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00305
old locus tag: Tph_c00610
so part of: sequence
location: 59197..59424
location: region:59197-59424:1
so has part: feature:59197-59424:1:exon
subclass of: SO_0000010

position:59197:1
position: 59197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59424:1
position: 59424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59197-59424:1:exon

TPH_RS00305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00305
old locus tag: Tph_c00610
inference: COORDINATES: protein motif:HMM:NF019751.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: H-type small acid-soluble spore protein
translation: MEKEGLIHLDSGRAKEIVESLGVVEVLYNGFPVWIERLNGDTAEVRFLETGGRLEVPVTELVEGGSLGEEGPGGP
SIO_010081: TPH_RS00305
subclass of: SO_0000673
so part of: TPH_RS00305
location: 59197..59424
location: region:59197-59424:1
so has part: feature:59197-59424:1:exon

WP_015049230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59197-59424:1:exon

TPH_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00315
old locus tag: Tph_c00620
so part of: sequence
location: 59941..60807
location: region:59941-60807:1
so has part: feature:59941-60807:1:exon
subclass of: SO_0000010

position:59941:1
position: 59941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60807:1
position: 60807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59941-60807:1:exon

TPH_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00315
old locus tag: Tph_c00620
inference: COORDINATES: protein motif:HMM:NF013088.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MGGYRFQSGVFLVLFSGICYGFMPIIAIYAYQGGATATTLAFLRAALAAVLFIVYLFWRGFPSNVNRRAVLILLAVGAFVQPLESFCYVAALQYISAGLTVLIFYTYPAWVAIWGLLFRWERLSLRKGIGIAVASAGLVLVVGTSLGRVNAYGVLLAITAALGCSFYVIFSKRAIRDVGPLYASTIMSVSTAVTLGVIGAAAGGLSFGMQPLGWLMALLCAVVTVNLALLAFLAGLKIVGSTTASILCMTEPLTTVVFSAILFSQHLTASQLLGGLVILAGAVLVVKG
SIO_010081: TPH_RS00315
subclass of: SO_0000673
so part of: TPH_RS00315
location: 59941..60807
location: region:59941-60807:1
so has part: feature:59941-60807:1:exon

WP_015049231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59941-60807:1:exon

TPH_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00320
old locus tag: Tph_c00630
so part of: sequence
location: complement(60808..61449)
location: region:60808-61449:-1
so has part: feature:60808-61449:-1:exon
subclass of: SO_0000010

position:60808:-1
position: 60808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61449:-1
position: 61449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60808-61449:-1:exon

TPH_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00320
old locus tag: Tph_c00630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011393986.1
GO process: GO:0009116 - nucleoside metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosyltransferase family protein
translation: MEVSKLVFLDRRDAGKRLAEELTHYRGKNVLVLGIPRGGVIVAAEVARALQAPLDVIIPRKIGAPFNEELAIGAAAPDGAVIFDERALSLLNLTKSDLQEQIERERKEMERRSRYYRRGRGALDCREKTVILIDDGIATGMTVKAALQSLRKQEPAALVLAVPVASREAVAELRLLVDDLICLHAPAAFYAVGQFYEDFRQTTDEEVIAALEQ
SIO_010081: TPH_RS00320
subclass of: SO_0000673
so part of: TPH_RS00320
location: complement(60808..61449)
location: region:60808-61449:-1
so has part: feature:60808-61449:-1:exon

WP_236608803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60808-61449:-1:exon

TPH_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00330
old locus tag: Tph_c00640
so part of: sequence
location: 61749..62021
location: region:61749-62021:1
so has part: feature:61749-62021:1:exon
subclass of: SO_0000010

position:61749:1
position: 61749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62021:1
position: 62021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61749-62021:1:exon

TPH_RS00330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00330
old locus tag: Tph_c00640
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEPLDALQTLIFMSVVVEALTAIFRRFVSKKASELVTILVGITLCCAYEVGIFSSLGLTTSYPLVDYCVSGIIISQGSNALSGLFRLRYK
SIO_010081: TPH_RS00330
subclass of: SO_0000673
so part of: TPH_RS00330
location: 61749..62021
location: region:61749-62021:1
so has part: feature:61749-62021:1:exon

WP_015049233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61749-62021:1:exon

TPH_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00335
old locus tag: Tph_c00650
so part of: sequence
location: 62199..62912
location: region:62199-62912:1
so has part: feature:62199-62912:1:exon
subclass of: SO_0000010

position:62199:1
position: 62199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62912:1
position: 62912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62199-62912:1:exon

TPH_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00335
old locus tag: Tph_c00650
inference: COORDINATES: protein motif:HMM:NF014704.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0009403 - toxin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CvpA family protein
translation: MNLLDGIILILLAAGALSGYRRGLIGAAASFLGFLGGIWLAGHYYIPLAGILEQRLGLEELFTRILFPFCAGIPVSGGEPLLNPVPGADVPGFPPSLWEPVQALNLGIGGVAIARTLADSLVKLLAFFLIYALASFTLGSLAGFLGGICTRIAGLFLLGGVNRLGGLALGLVTSALFVAVAVGMLTPFIFGLTLGLPAAEGLRQALLNNWNASLLIPYFTRSWGAIALVLARLFRMV
SIO_010081: TPH_RS00335
subclass of: SO_0000673
so part of: TPH_RS00335
location: 62199..62912
location: region:62199-62912:1
so has part: feature:62199-62912:1:exon

WP_015049234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62199-62912:1:exon

TPH_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: selD
locus tag: TPH_RS00345
old locus tag: Tph_c00670
so part of: sequence
location: 63190..64248
location: region:63190-64248:1
so has part: feature:63190-64248:1:exon
subclass of: SO_0000010

position:63190:1
position: 63190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64248:1
position: 64248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63190-64248:1:exon

TPH_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: selD
locus tag: TPH_RS00345
old locus tag: Tph_c00670
EC number: 2.7.9.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013538374.1
GO function: GO:0004756 - selenide, water dikinase activity [Evidence IEA]
GO process: GO:0001887 - selenium compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl except: (pos:63244..63246,aa:Sec)
transl table: 11
product: selenide, water dikinase SelD
translation: MPKEQETIRLTRFARYSGUAAKLGPGALEEILAGLPRFEHPDLLVGTGIPDDAGVYRLRPDLALVQTVDFFTPVVDDPYWFGQVAAANALSDIYAMGATPLTALNLVAFPSCKLGPEVLRAILKGGCDKVAEAGALVLGGHSVEDDEPKYGLAVTGVVHPAEVVTNSGACPGDFLILTKPLGTGVMVTALKGGLLTPDEERKLAEVMALLNAPAAEAMRLVGVHACTDITGFGLLGHLREMAVNSGVDVEIELASLPLLPKAKKFAEEGLIPGGAYRNKEYLKDHVEIGGRISPAEEDLLYDPQTSGGLLIAVSGEKREQLLSALREKGVASPRAVGRVTGRGKGRILVRGV
SIO_010081: TPH_RS00345
subclass of: SO_0000673
so part of: TPH_RS00345
location: 63190..64248
location: region:63190-64248:1
so has part: feature:63190-64248:1:exon

WP_081578540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63190-64248:1:exon

TPH_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: yedF
locus tag: TPH_RS00350
old locus tag: Tph_c00680
so part of: sequence
location: 64286..64873
location: region:64286-64873:1
so has part: feature:64286-64873:1:exon
subclass of: SO_0000010

position:64286:1
position: 64286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64873:1
position: 64873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64286-64873:1:exon

TPH_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: yedF
locus tag: TPH_RS00350
old locus tag: Tph_c00680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011391672.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase-like selenium metabolism protein YedF
translation: MSEEGVFVDARGLSCPQPVIMTRKALESAAEGRVTAVVDNEVARDNIVKMARSLSCEVDIDRAGSDYYIHITRPEHFSTRLQRQETQLFVFSSDCLGRGSEELGRTLMKNFFYSLCEQGGLGKVLIFLNGGVRLTCTGSPVLDYLIELQQDGAAILTCGTCLDYYQLRSSLGVGEVTNMYAIVEYLQQCPRVVFL
SIO_010081: TPH_RS00350
subclass of: SO_0000673
so part of: TPH_RS00350
location: 64286..64873
location: region:64286-64873:1
so has part: feature:64286-64873:1:exon

WP_015049237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64286-64873:1:exon

TPH_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00355
old locus tag: Tph_c00690
so part of: sequence
location: 65709..65906
location: region:65709-65906:1
so has part: feature:65709-65906:1:exon
subclass of: SO_0000010

position:65709:1
position: 65709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65906:1
position: 65906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65709-65906:1:exon

TPH_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00355
old locus tag: Tph_c00690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011391674.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF951 domain-containing protein
translation: MRFSLGDVVRMKKQHPCGNDEWEILRVGMDFRIRCLKCGRQVMIPRAKFERSVKAVVREALSDEE
SIO_010081: TPH_RS00355
subclass of: SO_0000673
so part of: TPH_RS00355
location: 65709..65906
location: region:65709-65906:1
so has part: feature:65709-65906:1:exon

WP_015049238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65709-65906:1:exon

TPH_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: rpsF
locus tag: TPH_RS00360
old locus tag: Tph_c00700
so part of: sequence
location: 66038..66328
location: region:66038-66328:1
so has part: feature:66038-66328:1:exon
subclass of: SO_0000010

position:66038:1
position: 66038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66328:1
position: 66328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66038-66328:1:exon

TPH_RS00360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: rpsF
locus tag: TPH_RS00360
old locus tag: Tph_c00700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015740091.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S6
translation: MRPYEILFILKPDLEEEATTAAIDRFANLIQQNQGSVEQISRWGKRRLAYEIAGYREGYYTLILFQGEPATAKELDRVMLLTDEVLRHIIVRRDAA
SIO_010081: TPH_RS00360
subclass of: SO_0000673
so part of: TPH_RS00360
location: 66038..66328
location: region:66038-66328:1
so has part: feature:66038-66328:1:exon

WP_015049239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66038-66328:1:exon

TPH_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00365
old locus tag: Tph_c00710
so part of: sequence
location: 66355..66804
location: region:66355-66804:1
so has part: feature:66355-66804:1:exon
subclass of: SO_0000010

position:66355:1
position: 66355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66804:1
position: 66804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66355-66804:1:exon

TPH_RS00365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00365
old locus tag: Tph_c00710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011391677.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded DNA-binding protein
translation: MFLNRVILIGRSTREPELRFTGSGTAVANFTLAVDRPFLNARGERETDFIRVVVWRKLAETCANYMGKGRLVAVEGRLQVRSYQTPEGQTRTATEVVADTVRFLDRAREGATAAGPTGPEAAPESGEEPGFLDDPVFNDEGFGMEEPPF
SIO_010081: TPH_RS00365
subclass of: SO_0000673
so part of: TPH_RS00365
location: 66355..66804
location: region:66355-66804:1
so has part: feature:66355-66804:1:exon

WP_015049240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66355-66804:1:exon

TPH_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: rpsR
locus tag: TPH_RS00370
old locus tag: Tph_c00720
so part of: sequence
location: 66770..67057
location: region:66770-67057:1
so has part: feature:66770-67057:1:exon
subclass of: SO_0000010

position:66770:1
position: 66770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67057:1
position: 67057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66770-67057:1:exon

TPH_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: rpsR
locus tag: TPH_RS00370
old locus tag: Tph_c00720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013412641.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S18
translation: MRVSVWRNRRFNIRISGGVILKRERGKKKKKVCSFCVERVDTIDYKDVYRLRKYITERGKILPRRISGNCAYHQRRLTTAIKRARNVALLPFTVE
SIO_010081: TPH_RS00370
subclass of: SO_0000673
so part of: TPH_RS00370
location: 66770..67057
location: region:66770-67057:1
so has part: feature:66770-67057:1:exon

WP_201764464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66770-67057:1:exon

TPH_RS15590
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15590
old locus tag: Tph_c00730
so part of: sequence
location: complement(67474..68769)
location: region:67474-68769:-1
so has part: feature:67474-68769:-1:exon
subclass of: SO_0000010

position:67474:-1
position: 67474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68769:-1
position: 68769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67474-68769:-1:exon

TPH_RS15590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15590
old locus tag: Tph_c00730
inference: COORDINATES: protein motif:HMM:NF019515.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1670 domain-containing protein
translation: MNRRELYRPLVERTLVNYQVQYLARRYDFGKESLVARLLVEEINRRMEEMESVLGIERVKPFELYVQKAQSQARLPLFCPEYLDPILGGGDFGMARQLILERCLQSYHMGFPKGGRGDLVRIIDPWSLVRKKGPSSYVDQLCQDIQPYSKTDAASWDCMIEQIQPVLPADRLQAPDLLAPGRVLKELTEFVAAEAGLGRVVARQLVEEVIALRHICCPRTKELKPYEMPLIVTHVSARLSEDVSTRFRQLTPVIITVWKPEELEQQPDTVPGFLEQLKRRIVRVCFEAYRQNGLLTLMELQWIFQLSSARISELIRSVQREHNLVVPTPGTILDAGRSMTHKDVIVGLHLQGYTVKDIARMTHHSPRAVDNYIGTFEAVLILYLFGVPPELMARLLKRGISLINEHLKLVREHYRDHQEIKEYLASKGVKI
SIO_010081: TPH_RS15590
subclass of: SO_0000673
so part of: TPH_RS15590
location: complement(67474..68769)
location: region:67474-68769:-1
so has part: feature:67474-68769:-1:exon

WP_015049242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67474-68769:-1:exon

TPH_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00380
old locus tag: Tph_c00740
so part of: sequence
location: complement(68766..70307)
location: region:68766-70307:-1
so has part: feature:68766-70307:-1:exon
subclass of: SO_0000010

position:68766:-1
position: 68766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70307:-1
position: 70307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68766-70307:-1:exon

TPH_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00380
old locus tag: Tph_c00740
inference: COORDINATES: protein motif:HMM:NF019515.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1670 domain-containing protein
translation: MGRAKEYRQRLKYQVASARKKTLESLLAVRFIEELGMSETEARLLGYRTSRWISNQPGIRGPNQILSDAVSGRDAFSRKHKALKKIRLTPYDIEDLDLELEFGLSTMQAGRILRLIEEAYRQDALLSAKQLTVLCNITPTSLRSRLAGLRREGMWVPVAGLPRVDRERGGMLRSAWALARYLDGESLSEVRRTAALSREAFRQLWSRFSHVARSILKGRFKQGDPEEEAWAAIVHVVPEKTLLPLLEEPGVPPSFGDWASFMNELMVDFALSPVKARALREIAEEMLTALSDSRPDGDVVYWAVASTEPAGKPLEACRLVPVSLTLIDPEDVPPPDVDRDLNRLSDIKFRKVLRYATQAKYAGGYLTYADLGYLLGIHPEAISRLVRSHPAVAVPLRGMECDIGRGVTHRKKIIKLYLEMHTETEIVARTGHSYEAIENYLKEFAAVLVLSERGLTVPLIRRVTGRSVKLINTYLELIQEYSGPEYAFRLHHLRKVFELHEDELKKSLRGVKR
SIO_010081: TPH_RS00380
subclass of: SO_0000673
so part of: TPH_RS00380
location: complement(68766..70307)
location: region:68766-70307:-1
so has part: feature:68766-70307:-1:exon

WP_015049243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68766-70307:-1:exon

TPH_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00385
old locus tag: Tph_c00760
so part of: sequence
location: complement(70600..71043)
location: region:70600-71043:-1
so has part: feature:70600-71043:-1:exon
subclass of: SO_0000010

position:70600:-1
position: 70600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71043:-1
position: 71043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70600-71043:-1:exon

TPH_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00385
old locus tag: Tph_c00760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013787307.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicB family antitoxin
translation: MPKYVYPAIFDPNEHGGYTVTFPDLPGCVTEGDTLDEALKMAAEAMALHLYGMEEDGDEIPVPSNPVEVKLPEDASPGAFVTLIQARTEPIRDETQNRAIKKTLTIPKWLNDAAEKEGINFSQVLQYALKEQLGFVDKHFFNRYMMD
SIO_010081: TPH_RS00385
subclass of: SO_0000673
so part of: TPH_RS00385
location: complement(70600..71043)
location: region:70600-71043:-1
so has part: feature:70600-71043:-1:exon

WP_015049245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70600-71043:-1:exon

TPH_RS14510
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS14510
so part of: sequence
location: complement(71071..71256)
location: region:71071-71256:-1
so has part: feature:71071-71256:-1:exon
subclass of: SO_0000010

position:71071:-1
position: 71071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71256:-1
position: 71256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71071-71256:-1:exon

TPH_RS14510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS14510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013149557.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicA family toxin
translation: MSSREIIKLLEEDGWYLVGVAGSHHQFKHPTKPGKVTVPHPRKSLAPKTFKSILKQAGLLK
SIO_010081: TPH_RS14510
subclass of: SO_0000673
so part of: TPH_RS14510
location: complement(71071..71256)
location: region:71071-71256:-1
so has part: feature:71071-71256:-1:exon

WP_081578541.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71071-71256:-1:exon

TPH_RS14965
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS14965
so part of: sequence
location: complement(71292..71579)
location: region:71292-71579:-1
so has part: feature:71292-71579:-1:exon
subclass of: SO_0000010

position:71292:-1
position: 71292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71579:-1
position: 71579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71292-71579:-1:exon

TPH_RS14965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS14965
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFRRKENIPQIEAETGLPAGGRLFLAGQHLMPAADSHPPVLCSSPALPLLPYGRQLITKVIQAMVVDLQINIIQLLSHKGPFLVFLTETYFLYVL
SIO_010081: TPH_RS14965
subclass of: SO_0000673
so part of: TPH_RS14965
location: complement(71292..71579)
location: region:71292-71579:-1
so has part: feature:71292-71579:-1:exon

WP_148275800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71292-71579:-1:exon

TPH_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00395
old locus tag: Tph_c00770
so part of: sequence
location: 71668..73359
location: region:71668-73359:1
so has part: feature:71668-73359:1:exon
subclass of: SO_0000010

position:71668:1
position: 71668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73359:1
position: 73359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71668-73359:1:exon

TPH_RS00395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00395
old locus tag: Tph_c00770
inference: COORDINATES: protein motif:HMM:NF013528.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DHH family phosphoesterase
translation: MESSLYKNYKRKFFVGLGILLALTCLALARYNMLLGIFGFIVTLTGMYAFSYMDRQEEAAREREIKEEALSLVSAEAPEESPAAAAISLAFLQVDDYDEVFHSLPDEQRPLLVAAVDKFLREWAASLGAYLHKTGRDSYTLLLPLQELEALEQKEFSLLDEVRKINVGDHPPVTLSIGAARGVDAGNPARLGQLARQALNLAIERGGDQAVVKSPEHTWFYGGRTEAVGKRSQVRARVTAAELDRLLKTAKNVVLMGHVGMDFDALGAALGLAEIAGHYGKPAKIVIDRQGGAVERLFSLVAGHNPELLCEKEDAVELTSPQTLLVLVDVHRPQMVISPKLLSRAGSIVVIDHHRRGEEFPEHVKLSYIVPAASSTCELVGELAHYFPEEIHFSSLAATAMLAGLVVDTKRFTFGTSSRTFRVAAWLREAGAAPAVIRELFTDTLEVMLYRARILQSVEIVGGKYAVAGNDEPFAGAQVAASRAADNLLEIAGVTASFVLYPVEGGMRISARSTGAVNVHRVMEKLGGGGHFTVAAAFLPDVGMEEARRRLLNILHAELEEGR
SIO_010081: TPH_RS00395
subclass of: SO_0000673
so part of: TPH_RS00395
location: 71668..73359
location: region:71668-73359:1
so has part: feature:71668-73359:1:exon

WP_015049246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71668-73359:1:exon

TPH_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: rplI
locus tag: TPH_RS00400
old locus tag: Tph_c00780
so part of: sequence
location: 73365..73817
location: region:73365-73817:1
so has part: feature:73365-73817:1:exon
subclass of: SO_0000010

position:73365:1
position: 73365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73817:1
position: 73817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73365-73817:1:exon

TPH_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: rplI
locus tag: TPH_RS00400
old locus tag: Tph_c00780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011391680.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L9
translation: MKVILREDVKNLGKKGDIVEVSEGHGRNYLIPRGLAVPVTRGVLKEASLIADGRAKKEERLLKNARELASRLDGMTVTLPARAGEGGKLYGAVTSRDIAAALERLLGRKVDKKKIELPEPIKALGVFPVQIRLHPGVQVEIRVNVVAADS
SIO_010081: TPH_RS00400
subclass of: SO_0000673
so part of: TPH_RS00400
location: 73365..73817
location: region:73365-73817:1
so has part: feature:73365-73817:1:exon

WP_028991215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73365-73817:1:exon

TPH_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: lonC
locus tag: TPH_RS00405
old locus tag: Tph_c00790
so part of: sequence
location: 73851..75794
location: region:73851-75794:1
so has part: feature:73851-75794:1:exon
subclass of: SO_0000010

position:73851:1
position: 73851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75794:1
position: 75794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73851-75794:1:exon

TPH_RS00405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: lonC
locus tag: TPH_RS00405
old locus tag: Tph_c00790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011342988.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0030436 - asexual sporulation [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Lon family ATP-dependent protease
translation: MPGGCKEKNSAWEEEKKAGRRGFKRSEIKGRVAALYQILADVYGSERLILRASKLGVLKAMRSNMVGEQVLALQKLIQGDPTISRAPLMKDIPEILDDLEDTLAQMMARRVVEEDLERKIAEKLQERQDQYLNEMREQLLKEKGTPENAATLKKLAVLEKKKQVHLNESIGAVLRPRTPEEIIGQERALKALIAKLAAPYPQHILLYGPPGVGKTSAARIALEHVKSRGDSIFQPDAPFVEVDGTTLRWDPRDVTNPLIGSVHDPIYQGARRELAESGVPEPKPGLVTEAHGGILFIDEIGDVDPILQNKLLKVMEDKRVYFDSSYYEPNDPNIPEYIKKLFEEGAPADFVLIGATTRSPEEISPAFRSRCAEIFFDCLTPEDVQKVLHQAARKLEVALEPGVAESISDYTVDARKATNVLVDAYAVARYRRGGTGKRILVTMEDLQEVLQVSRMTPHVTTHAAACGEIGRVFGLAVSGFLGTIIEIEAVAFPARDSRRGIVRFNDAAGTMAKDSVFNALAVYRKLTGKDAADYDIHVNIVGGGRVDGPSAGAAIFLAIYSAIEGVPLRQDVAVTGELSIQGRVKAVGGISEKIYGARQIGARKVIAPAENTRDLPGELWGITVVGVRNIDEALPHVLFSGERPEGA
SIO_010081: TPH_RS00405
subclass of: SO_0000673
so part of: TPH_RS00405
location: 73851..75794
location: region:73851-75794:1
so has part: feature:73851-75794:1:exon

WP_015049248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73851-75794:1:exon

TPH_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: dnaB
locus tag: TPH_RS00410
old locus tag: Tph_c00800
so part of: sequence
location: 75794..77176
location: region:75794-77176:1
so has part: feature:75794-77176:1:exon
subclass of: SO_0000010

position:77176:1
position: 77176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75794-77176:1:exon

TPH_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: dnaB
locus tag: TPH_RS00410
old locus tag: Tph_c00800
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013782183.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replicative DNA helicase
translation: MELLNRIPPHNLEAEQAVLGALLIAPESLATVAEILRPEDFYGEGHRAIYLTLKEMAEAGRPIDLLTVTEELQGKGLLEQVGGATYLATLAGAVPTAVHVEYYAGIVAEKGLLRSIIEACTRIASQGYEEGAESESLLDEAERMLLSLGERRQSRSYRSIRELLVETLEKIEQLYQRKGSVTGLPTGFTELDRITSGLQPSDLILLAARPSMGKTSLGLNIAQNVAVKSGVPVGIFSLEMSGDQVVQRLLCSEALVDQQRLRTGFLQEDDWPRLLKAATRLAEAPIFIDDTPAITLLELRSKARRLKLEHGIGLLVVDYLQLIQSGRRMENRVQEISEISRQLKSLARELDVPVLALSQLSRAVEQRGGDRRPLLSDLRESGSLEQDSDVVMFIYRDDYYNEDSEEKGVADIIIAKQRNGPVGTVKLAFLKEFTKFVNLEREEPPAFGGERDYGIEPEED
SIO_010081: TPH_RS00410
subclass of: SO_0000673
so part of: TPH_RS00410
location: 75794..77176
location: region:75794-77176:1
so has part: feature:75794-77176:1:exon

WP_015049249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75794-77176:1:exon

TPH_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00415
old locus tag: Tph_c00810
so part of: sequence
location: 77333..77761
location: region:77333-77761:1
so has part: feature:77333-77761:1:exon
subclass of: SO_0000010

position:77333:1
position: 77333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77761:1
position: 77761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77333-77761:1:exon

TPH_RS00415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00415
old locus tag: Tph_c00810
inference: COORDINATES: protein motif:HMM:NF037100.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase domain-containing protein
translation: MDIQSLCQKLSPVFESYGVSCCYLFGSRAGENYYHDSDIDLAVVFDNYSPEKHNLNLEIEIQDTVSEILAPLEVDLLFLQKAPIYLRFTVIKNGKVIYCSNEDFRTDFEDITIRDYLDFKPVLDMYYREMAEELIEKNGGRI
SIO_010081: TPH_RS00415
subclass of: SO_0000673
so part of: TPH_RS00415
location: 77333..77761
location: region:77333-77761:1
so has part: feature:77333-77761:1:exon

WP_015049250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77333-77761:1:exon

TPH_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00420
old locus tag: Tph_c00820
so part of: sequence
location: 77765..78187
location: region:77765-78187:1
so has part: feature:77765-78187:1:exon
subclass of: SO_0000010

position:77765:1
position: 77765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78187:1
position: 78187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77765-78187:1:exon

TPH_RS00420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00420
old locus tag: Tph_c00820
inference: COORDINATES: protein motif:HMM:NF014043.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF86 domain-containing protein
translation: MINKDLIRNRIDLINRSIARLKRMAALSREQFLADPDNFAIAEHHLRRALQSLFDAGRHIIAKQGLGHPVDYRSIILTLGREKIIPPQFAERIKGMAGYRNRLVHGYAEVTPEEMYNVIQERLDDFEEFCFHILKYTANT
SIO_010081: TPH_RS00420
subclass of: SO_0000673
so part of: TPH_RS00420
location: 77765..78187
location: region:77765-78187:1
so has part: feature:77765-78187:1:exon

WP_015049251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77765-78187:1:exon

TPH_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00425
old locus tag: Tph_c00830
so part of: sequence
location: complement(78221..79783)
location: region:78221-79783:-1
so has part: feature:78221-79783:-1:exon
subclass of: SO_0000010

position:78221:-1
position: 78221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79783:-1
position: 79783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78221-79783:-1:exon

TPH_RS00425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00425
old locus tag: Tph_c00830
EC number: 6.3.2.31
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011025174.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: coenzyme F420-0:L-glutamate ligase
translation: MEKLVLPANTGVAAIGLKIGLIVPNDDIASITAEAVREIAADGDIVCVTEAVVARSQNRYVSCTELAEDIRQKLNLKPGSTVAMISPIASRNRFALILKAIAMATRGGKVIVQFPIPFDEVGNQVIDEEFASTRLKLKKTLQSLYEARGNTPMLNVLIREIIAALKLQEIGYQILSIRKITGKGIADLTVRMPDGRIAVAEVTFADLQKAARKATGIRQDVPEAECALAIAVALEHHRLSIVDADEYLEQGKVEPETLDFSALLPSYHEPEVIFSGELGNNSFTHPITEVDYRKLYLSMIAEGGASGEIIFTNNPFKIYNLGYIDGVCIGAVHEREKLRELFLSFGALVPVITIQEVGPPPWGVIGSNVSDFEGGILKLLPEDPNGTAEKIKDKIRAVTGKEVEVLIFGDGAYKDPDTGIYELADPHPAIGVSSGLKEAGLRKGAKLKLVVDTLYKQGYTKEEILEYLKNRQGKTTKEELGTTPRSLTSIIGTLADLVAGSADAGTPIVLVRGFQYERKS
SIO_010081: TPH_RS00425
subclass of: SO_0000673
so part of: TPH_RS00425
location: complement(78221..79783)
location: region:78221-79783:-1
so has part: feature:78221-79783:-1:exon

WP_015049252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78221-79783:-1:exon

TPH_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00430
old locus tag: Tph_c00840
so part of: sequence
location: complement(79890..81254)
location: region:79890-81254:-1
so has part: feature:79890-81254:-1:exon
subclass of: SO_0000010

position:79890:-1
position: 79890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81254:-1
position: 81254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79890-81254:-1:exon

TPH_RS00430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00430
old locus tag: Tph_c00840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013781085.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: radical SAM protein
translation: MMNKLQKAAVHLLVRYLVNDSLKKLPKAFNLAEKLDRGHLHTPQIRAVRDILLDENSLWRRFVEDLLREVDRKVLVKLVENFFINSYLDGAARARAVEARYDCNVPWAILMDPTSACNLSCTGCWAAQYGNKSSLSYEDLDSICRQGKEMGIYFYIFSGGEPLLRKRDIIRLCEEHQDCYFSAFTNGTLVDDEFCEELLRVGNFALAFSIEGDEEATDMRRGKGTYKKVIEAMERMRRHKLLFGYSTCYHRYNTESVGSDEFVDEMIAHGCRFSWNFTYIPVGKDAVTDLLATPEQRAYMYRRVREIRQTKPIFIMDFWNDGEFTNGCIAGGRRYLHINSAGDVEPCAFVHYSNVNIHEVSLLEALRSPLFMAYRRNQPFNQNHLRPCPLLDNPEALISMVKESGAQSTDMKAPEDVETLCAKTAPAAEKWARVADTLWAEHLQKEYHAERKRA
SIO_010081: TPH_RS00430
subclass of: SO_0000673
so part of: TPH_RS00430
location: complement(79890..81254)
location: region:79890-81254:-1
so has part: feature:79890-81254:-1:exon

WP_201764465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79890-81254:-1:exon

TPH_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00435
old locus tag: Tph_c00850
so part of: sequence
location: complement(81396..82124)
location: region:81396-82124:-1
so has part: feature:81396-82124:-1:exon
subclass of: SO_0000010

position:81396:-1
position: 81396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82124:-1
position: 82124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81396-82124:-1:exon

TPH_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00435
old locus tag: Tph_c00850
inference: COORDINATES: protein motif:HMM:NF012655.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR family transcriptional regulator
translation: MEKENNGNNETRERIVNASIQLFSEKGFDATRVNEIARAANVNKALIYYYFKNKEDILDYLVHSLFDSVTTITMNFIQVSIIKMIKEGHLDIEPDRLRFANEEARECFLQNVHIYYERLLDYALENKAIIRILMLESLKNGKHQNALFRLVDLTKSSNDNSIFRTISDADSDFSYSHDMILFQVFFSLFPLVCFAAYYDDIKEISLLNDQELRSAFLRSFEILVASLVSNKEILLRSPPTGV
SIO_010081: TPH_RS00435
subclass of: SO_0000673
so part of: TPH_RS00435
location: complement(81396..82124)
location: region:81396-82124:-1
so has part: feature:81396-82124:-1:exon

WP_201764466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81396-82124:-1:exon

TPH_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00440
old locus tag: Tph_c00860
so part of: sequence
location: 82479..83876
location: region:82479-83876:1
so has part: feature:82479-83876:1:exon
subclass of: SO_0000010

position:82479:1
position: 82479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83876:1
position: 83876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82479-83876:1:exon

TPH_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00440
old locus tag: Tph_c00860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011345531.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MSKYDCIIVGAGPAGIFCALELVRSNTGMKILMLEKGRDLPERVCPSREKKAPCFGCNSCAVVSGWGGAGAFSDGKLALSTDVGGMLGEYLDRRSFEEGIKYVHDIYLEFGAPEKIYGLERQEEIELLQKRAALAGLRLVPAPVRHMGTGRTQKILQRMQDYLKEKGVTVKTRSPVASILVESGAAAGVVTEEGEEIAARYVVCAPGRHGAEWLVKEALRLGLETTINPVDIGLRVELPAAVLEPLTDITYEAKFLFTSPTFEDRVRTFCMNPYGEVVMENTDGIITVNGHTHAEYKTENTNFALLVSKTFTEPFKEPIAYGKYIASLANMLGGGVIVQRLGDLMQGRRSTAERLAKGMVVPTLQEATPGDLSLVLPYRHFLAIIEMLQAMDQVAPGVYSRHTLLYGVEVKFYSSRLKVSGDLETGLPKLFVAGDGAGITRGLSQASLSGVVAGRAIARRVAGEL
SIO_010081: TPH_RS00440
subclass of: SO_0000673
so part of: TPH_RS00440
location: 82479..83876
location: region:82479-83876:1
so has part: feature:82479-83876:1:exon

WP_015049255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82479-83876:1:exon

TPH_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00445
old locus tag: Tph_c00870
so part of: sequence
location: 83958..84605
location: region:83958-84605:1
so has part: feature:83958-84605:1:exon
subclass of: SO_0000010

position:83958:1
position: 83958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84605:1
position: 84605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83958-84605:1:exon

TPH_RS00445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00445
old locus tag: Tph_c00870
inference: COORDINATES: protein motif:HMM:NF033518.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS607 family transposase
translation: MELLSIGEAAKRLGVHPNRLRAWEKQGLIKSIRLPSGQRRYPAEEINRILGTGGIKAEQDAVVLYARVSTKKQADAGNLERQMERLRAYAQEKGYRIVGEHLDVASGLNQNRRGLERVLKMAERGEFKKLLIEYPDRLARFGYAYLERHLKHCGVEIEVTSQREPVDAHTELVQDLLTIVTSFSARLYGARGGRKVRQGFRELIEDAEKAQKGEV
SIO_010081: TPH_RS00445
subclass of: SO_0000673
so part of: TPH_RS00445
location: 83958..84605
location: region:83958-84605:1
so has part: feature:83958-84605:1:exon

WP_015049256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83958-84605:1:exon

TPH_RS00450
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00450
old locus tag: Tph_c00880
so part of: sequence
location: 84574..86262
location: region:84574-86262:1
so has part: feature:84574-86262:1:exon
subclass of: SO_0000010

position:84574:1
position: 84574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86262:1
position: 86262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84574-86262:1:exon

TPH_RS00450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00450
old locus tag: Tph_c00880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015738458.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS200/IS605 family element transposase accessory protein TnpB
translation: MRKRHKREKFSVTVCGEFFPESYPAFRSPRRSRGEEDPLETELRLFCACMRWAFCRLLEGASRDEVKRKGQELFGLNSRYVDDARLKAQAVLDSQKELLELEIEETEKKLGRARKKLGLAMKKPAKAEEKGAPPEVIEKLHLTVKGRNSRVASLEKKLAELEAHRENGTIPKVVFGGRKLWKRVCKGRASREEWRAARRNRIFSRGDETKGGNPNVKVTYREGEFRLAVTISHLSERTGEDALGRPKMSRAPRVEGRLWLPEKHRDLVRIWLAVGLPYTAELIRTLEGRYTVHLTFDLGGIPEPDFSRGCLALDTNPDGVTLCNVSASGYPEPWPEGFSIPYPSNLGKYEGEFQIIPYPNGFLYIRIPELAYASGFRRDYLAGVLAKAVVDTALSLGKPIALEDLDFGRDRLGTNKKFNRMASNFPFAKMVEAVCRRAAKEGLSFKLVPARHTSTIGYWKYAERNAVPVHCAAALSIGRRAMGFKERVTEELKQRLAQIKRGLAQQVSPDRPREGEGMTRRVKAILERLDEEIPLHNGLTLKRQEAFYSVWHDLRELALTLR
SIO_010081: TPH_RS00450
subclass of: SO_0000673
so part of: TPH_RS00450
location: 84574..86262
location: region:84574-86262:1
so has part: feature:84574-86262:1:exon

WP_015049257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84574-86262:1:exon

TPH_RS00455
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00455
old locus tag: Tph_c00890
so part of: sequence
location: 86570..87859
location: region:86570-87859:1
so has part: feature:86570-87859:1:exon
subclass of: SO_0000010

position:86570:1
position: 86570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87859:1
position: 87859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86570-87859:1:exon

TPH_RS00455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00455
old locus tag: Tph_c00890
EC number: 6.3.4.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011393792.1
GO function: GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO process: GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenylosuccinate synthase
translation: MSGVVIVGAQWGDEGKGKVTDYLASRADVVVRYQGGSNAGHTVVKDGQEYRLHLVPSGILYPDKVCVIGNGLVVDPVGLCEELDGLQRRGLPLARLYVSDRAHILLPCHIRLDEAEEQNRDNGRIGTTGRGIGPAYTDKVARIGLRAGELMEPGWEDQVVALVEKKNRVLKKLYGMDGFPPQAVVEKLRPSVERLRPLITDTSLLLNSALKEGKNVLFEGAQGTLLDLDHGTYPYVTSSSPTAGGACTGSGVGPTAIDAVYGVCKAYLTRVGEGPFPTELHGETCRQIRDRGKEYGTTTGRPRRCGWLDLVMLRYTARVNGLTGLLITRLDVLDEQPRLLLCTGYRYRGELLEGFPASLRVLRECEPVYEEMEGWQQDTSGARRLDDLPPAARRYLDRISEIVDVPVAMVSVGPQREQTIVVEEIFPGS
SIO_010081: TPH_RS00455
subclass of: SO_0000673
so part of: TPH_RS00455
location: 86570..87859
location: region:86570-87859:1
so has part: feature:86570-87859:1:exon

WP_015049258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86570-87859:1:exon

TPH_RS00460
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00460
old locus tag: Tph_c00900
so part of: sequence
location: 88167..88242
location: region:88167-88242:1
so has part: feature:88167-88242:1:exon
subclass of: SO_0000663

position:88167:1
position: 88167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88242:1
position: 88242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88167-88242:1:exon

TPH_RS00460
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1089553
locus tag: TPH_RS00460
old locus tag: Tph_c00900
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.9
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:88200..88202,aa:Lys,seq:ttt)
SIO_010081: TPH_RS00460
subclass of: SO_0000673
so part of: TPH_RS00460
location: 88167..88242
location: region:88167-88242:1
so has part: feature:88167-88242:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88167-88242:1:exon

TPH_RS00465
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00465
old locus tag: Tph_c00910
so part of: sequence
location: 88465..88692
location: region:88465-88692:1
so has part: feature:88465-88692:1:exon
subclass of: SO_0000010

position:88465:1
position: 88465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88692:1
position: 88692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88465-88692:1:exon

TPH_RS00465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00465
old locus tag: Tph_c00910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013755782.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicB family antitoxin
translation: MQRRFKVILEKNDSNGYTVTVPALPGCVTQGKNKSEALERIREAIQGYLEALEIEGLPMPESDIDVAEVEVAYGV
SIO_010081: TPH_RS00465
subclass of: SO_0000673
so part of: TPH_RS00465
location: 88465..88692
location: region:88465-88692:1
so has part: feature:88465-88692:1:exon

WP_015049259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88465-88692:1:exon

TPH_RS14515
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS14515
old locus tag: Tph_c00920
so part of: sequence
location: 88689..88913
location: region:88689-88913:1
so has part: feature:88689-88913:1:exon
subclass of: SO_0000010

position:88689:1
position: 88689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88913:1
position: 88913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88689-88913:1:exon

TPH_RS14515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS14515
old locus tag: Tph_c00920
inference: COORDINATES: protein motif:HMM:NF019540.2
GO function: GO:0003729 - mRNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicA family toxin
translation: MTKLPRVSGKDVVRALKRAGFRVTHIRGSHYYLRRSGGSLVTVPVHPDEILDLKTLKSILKQAGISIEELIDLL
SIO_010081: TPH_RS14515
subclass of: SO_0000673
so part of: TPH_RS14515
location: 88689..88913
location: region:88689-88913:1
so has part: feature:88689-88913:1:exon

WP_015049260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88689-88913:1:exon

TPH_RS15595
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15595
old locus tag: Tph_c00930
so part of: sequence
location: complement(88860..89249)
location: region:88860-89249:-1
so has part: feature:88860-89249:-1:exon
subclass of: SO_0000010

position:88860:-1
position: 88860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89249:-1
position: 89249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88860-89249:-1:exon

TPH_RS15595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15595
old locus tag: Tph_c00930
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARIIAEIEKSTYIEKIIWTAKGPPVELEAKKKSTAISCGALIFNGEPSGTRTSDTLIKSSGKHVSSGFSGYLKFTKILLNHGLPAQVSFIQFFNFIQSFLVCDQIVITLVSLKQINQFLNRYSCLFKD
SIO_010081: TPH_RS15595
subclass of: SO_0000673
so part of: TPH_RS15595
location: complement(88860..89249)
location: region:88860-89249:-1
so has part: feature:88860-89249:-1:exon

WP_201764467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88860-89249:-1:exon

TPH_RS14520
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS14520
old locus tag: Tph_c00940
so part of: sequence
location: 89421..89582
location: region:89421-89582:1
so has part: feature:89421-89582:1:exon
subclass of: SO_0000010

position:89421:1
position: 89421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89582:1
position: 89582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89421-89582:1:exon

TPH_RS14520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS14520
old locus tag: Tph_c00940
inference: COORDINATES: protein motif:HMM:NF016895.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SPOR domain-containing protein
translation: MPVLQTSGLWRVQVGAFVKKEKAEALAERLRAAGFDAWVVLPTMPQADSNDST
SIO_010081: TPH_RS14520
subclass of: SO_0000673
so part of: TPH_RS14520
location: 89421..89582
location: region:89421-89582:1
so has part: feature:89421-89582:1:exon

WP_015049262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89421-89582:1:exon

TPH_RS14525
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS14525
pseudo: true
so part of: sequence
location: <89626..>89849
location: region:89626-89849:1
so has part: feature:89626-89849:1:exon
subclass of: SO_0000010

position:89626:1
position: 89626
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:89849:1
position: 89849
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89626-89849:1:exon

TPH_RS14525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS14525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011343704.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: TPH_RS14525
subclass of: SO_0000673
so part of: TPH_RS14525
location: <89626..>89849
location: region:89626-89849:1
so has part: feature:89626-89849:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89626-89849:1:exon

TPH_RS00475
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00475
old locus tag: Tph_c00950
so part of: sequence
location: 90074..90442
location: region:90074-90442:1
so has part: feature:90074-90442:1:exon
subclass of: SO_0000010

position:90074:1
position: 90074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90442:1
position: 90442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90074-90442:1:exon

TPH_RS00475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00475
old locus tag: Tph_c00950
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDKHQGLEERIQKLEERIRETEIRQRLLVDAIARVAELVDPNFRSFSLLALISGFRGKDIEEMQHFFEEWVINHLPDEENGREKFVQEFTRRFPQYAHMLEAIMQAYQADGLLPQLTRIILE
SIO_010081: TPH_RS00475
subclass of: SO_0000673
so part of: TPH_RS00475
location: 90074..90442
location: region:90074-90442:1
so has part: feature:90074-90442:1:exon

WP_015049263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90074-90442:1:exon

TPH_RS15285
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15285
so part of: sequence
location: 90571..90738
location: region:90571-90738:1
so has part: feature:90571-90738:1:exon
subclass of: SO_0000010

position:90571:1
position: 90571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90738:1
position: 90738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90571-90738:1:exon

TPH_RS15285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15285
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGSWAGGRAVLRTAGLALLVAGSASAMAVPPMLAGRFLDAREAVAAGSGRGTGSG
SIO_010081: TPH_RS15285
subclass of: SO_0000673
so part of: TPH_RS15285
location: 90571..90738
location: region:90571-90738:1
so has part: feature:90571-90738:1:exon

WP_155990799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90571-90738:1:exon

TPH_RS00490
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00490
old locus tag: Tph_c00960
so part of: sequence
location: 91170..91757
location: region:91170-91757:1
so has part: feature:91170-91757:1:exon
subclass of: SO_0000010

position:91170:1
position: 91170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91757:1
position: 91757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91170-91757:1:exon

TPH_RS00490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00490
old locus tag: Tph_c00960
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVQYWYRRVVAAAVMVSLLVVQSFLGISQAMASPSAGLAWGPVTVGNLQFKVSNVHYGYAGPKVGNTDHFNIYVDRKDSRGRYTIPVANYHVSTSNRGNSWCVYVWDSVSGKTILDACSNDPMTLAQQAASAIKSSLKTLLSNADWIATTAIIGVLTLVIIDLIVPGDPIPIIPFSVQKTSVSPLSDSLTLFNGE
SIO_010081: TPH_RS00490
subclass of: SO_0000673
so part of: TPH_RS00490
location: 91170..91757
location: region:91170-91757:1
so has part: feature:91170-91757:1:exon

WP_015049264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91170-91757:1:exon

TPH_RS00495
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00495
old locus tag: Tph_c00970
so part of: sequence
location: 91763..92311
location: region:91763-92311:1
so has part: feature:91763-92311:1:exon
subclass of: SO_0000010

position:91763:1
position: 91763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92311:1
position: 92311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91763-92311:1:exon

TPH_RS00495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00495
old locus tag: Tph_c00970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019907354.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGDREYFYIGDRNKNTSGIKSIGGIWKSVLKYGVLSGSHFEARFPDDPALSEGKDEFLQLPKISVESWSGMKGAIAVKGEMTPEARALFSRIIDSEDIRLWDFVIFRDGKKLLSVSDYDDRIVTEHFAKEFMEKLFHSWFEAIPEPEIKPQEGETGEFLEVLREMTQEIVSMLERDKSVHG
SIO_010081: TPH_RS00495
subclass of: SO_0000673
so part of: TPH_RS00495
location: 91763..92311
location: region:91763-92311:1
so has part: feature:91763-92311:1:exon

WP_015049265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91763-92311:1:exon

TPH_RS15800
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15800
old locus tag: Tph_c00980
so part of: sequence
location: 92751..92984
location: region:92751-92984:1
so has part: feature:92751-92984:1:exon
subclass of: SO_0000010

position:92751:1
position: 92751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92984:1
position: 92984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92751-92984:1:exon

TPH_RS15800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15800
old locus tag: Tph_c00980
inference: COORDINATES: protein motif:HMM:NF013677.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MNRKQYSPEMKMQIVKETLETGNASIVARRHDRAKTKTASVLIWVLRNPWSHVIKNLTKLHKFILADPPLAGNAVYS
SIO_010081: TPH_RS15800
subclass of: SO_0000673
so part of: TPH_RS15800
location: 92751..92984
location: region:92751-92984:1
so has part: feature:92751-92984:1:exon

WP_015049266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92751-92984:1:exon

TPH_RS14530
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS14530
pseudo: true
so part of: sequence
location: <93073..93318
location: region:93073-93318:1
so has part: feature:93073-93318:1:exon
subclass of: SO_0000010

position:93073:1
position: 93073
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:93318:1
position: 93318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93073-93318:1:exon

TPH_RS14530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS14530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012269208.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: reverse transcriptase domain-containing protein
SIO_010081: TPH_RS14530
subclass of: SO_0000673
so part of: TPH_RS14530
location: <93073..93318
location: region:93073-93318:1
so has part: feature:93073-93318:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93073-93318:1:exon

TPH_RS00510
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00510
old locus tag: Tph_c00990
so part of: sequence
location: 93393..93653
location: region:93393-93653:1
so has part: feature:93393-93653:1:exon
subclass of: SO_0000010

position:93393:1
position: 93393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93653:1
position: 93653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93393-93653:1:exon

TPH_RS00510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00510
old locus tag: Tph_c00990
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicA family toxin
translation: MAKYKKLLMRIMSGQSDANIPFVELCNLLLALGFKERVKGDHHIFYQDGIEEILNLQPKGTLAKAYQVKQVRAVILKYRMGGINNV
SIO_010081: TPH_RS00510
subclass of: SO_0000673
so part of: TPH_RS00510
location: 93393..93653
location: region:93393-93653:1
so has part: feature:93393-93653:1:exon

WP_015049267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93393-93653:1:exon

TPH_RS00515
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00515
old locus tag: Tph_c01000
so part of: sequence
location: 93646..93855
location: region:93646-93855:1
so has part: feature:93646-93855:1:exon
subclass of: SO_0000010

position:93646:1
position: 93646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93855:1
position: 93855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93646-93855:1:exon

TPH_RS00515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00515
old locus tag: Tph_c01000
inference: COORDINATES: protein motif:HMM:NF027249.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicB family antitoxin
translation: MYKYEIIIYWSEEDEAFIAEVPELPGCAADGASYQEVLANVEKVIEEWIETATELGRPIPKPKGRLRYA
SIO_010081: TPH_RS00515
subclass of: SO_0000673
so part of: TPH_RS00515
location: 93646..93855
location: region:93646-93855:1
so has part: feature:93646-93855:1:exon

WP_015049268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93646-93855:1:exon

TPH_RS00520
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00520
old locus tag: Tph_c01010
so part of: sequence
location: 94143..94358
location: region:94143-94358:1
so has part: feature:94143-94358:1:exon
subclass of: SO_0000010

position:94143:1
position: 94143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94358:1
position: 94358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94143-94358:1:exon

TPH_RS00520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00520
old locus tag: Tph_c01010
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSIERLENEIRKLKPHEREELFRRLGILKGKEEKRRGGPDDPLAKLIGIVEISSDSSKRYKEDLYGGRTPL
SIO_010081: TPH_RS00520
subclass of: SO_0000673
so part of: TPH_RS00520
location: 94143..94358
location: region:94143-94358:1
so has part: feature:94143-94358:1:exon

WP_015049269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94143-94358:1:exon

TPH_RS00525
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00525
old locus tag: Tph_c01020
so part of: sequence
location: 94336..94776
location: region:94336-94776:1
so has part: feature:94336-94776:1:exon
subclass of: SO_0000010

position:94336:1
position: 94336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94776:1
position: 94776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94336-94776:1:exon

TPH_RS00525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00525
old locus tag: Tph_c01020
inference: COORDINATES: protein motif:HMM:NF013970.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PIN domain-containing protein
translation: MEAVHLSKLFIDTSAFVALVDKKDDLHRPAVNFYQSLDEKIILITSIFIVSETYTWLRYKRDFKAAKLFLNIIGEAFKTDFIKIVYPDQVMCEKIPGILEKYQDQDLSYTDAFSFLVIENMGIKDVFGFDCHFYSAKCILWPVVKK
SIO_010081: TPH_RS00525
subclass of: SO_0000673
so part of: TPH_RS00525
location: 94336..94776
location: region:94336-94776:1
so has part: feature:94336-94776:1:exon

WP_015049270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94336-94776:1:exon

TPH_RS00535
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00535
old locus tag: Tph_c01030
so part of: sequence
location: 95656..96030
location: region:95656-96030:1
so has part: feature:95656-96030:1:exon
subclass of: SO_0000010

position:95656:1
position: 95656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96030:1
position: 96030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95656-96030:1:exon

TPH_RS00535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00535
old locus tag: Tph_c01030
inference: COORDINATES: protein motif:HMM:NF014620.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NifB/NifX family molybdenum-iron cluster-binding protein
translation: MKIAIPYENGKVNPHFGQSREFVIFETDGKEIKGQKVIDGRSFCHNHEGLAGTLKAEGVEVVIAGGIGYGMVGALRGAGLKVVSGASGDARMVAEDYLNGTLVADGSVCGCGGHEHGHGHFHHR
SIO_010081: TPH_RS00535
subclass of: SO_0000673
so part of: TPH_RS00535
location: 95656..96030
location: region:95656-96030:1
so has part: feature:95656-96030:1:exon

WP_015049271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95656-96030:1:exon

TPH_RS00540
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: tsaA
locus tag: TPH_RS00540
old locus tag: Tph_c01040
so part of: sequence
location: 96395..96856
location: region:96395-96856:1
so has part: feature:96395-96856:1:exon
subclass of: SO_0000010

position:96395:1
position: 96395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96856:1
position: 96856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96395-96856:1:exon

TPH_RS00540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: tsaA
locus tag: TPH_RS00540
old locus tag: Tph_c01040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015050869.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
translation: MNLMPVGMIHSPYRTLKDAPRQGRLAGGTAELEVFPEFAEGLKDVEKASHLIVLYWCHLSSRDTLQTKTPFGPELRGVFACRSPARPNPIAFCVAELLEVKGNRLLVCGLDAVDGSPLLDIKPYSSEVDAVPGARIGWFEKPGKGSSCAISKE
SIO_010081: TPH_RS00540
subclass of: SO_0000673
so part of: TPH_RS00540
location: 96395..96856
location: region:96395-96856:1
so has part: feature:96395-96856:1:exon

WP_037999655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96395-96856:1:exon

TPH_RS00545
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00545
old locus tag: Tph_c01050
so part of: sequence
location: 96869..97660
location: region:96869-97660:1
so has part: feature:96869-97660:1:exon
subclass of: SO_0000010

position:96869:1
position: 96869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97660:1
position: 97660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96869-97660:1:exon

TPH_RS00545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00545
old locus tag: Tph_c01050
inference: COORDINATES: protein motif:HMM:NF013793.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogenase reductase
translation: MMPKLLVCGRGGSGKSTLVALLAQCLGEEGKVLVVDADESNLGLGTMLRLQPPEKTLMDYLGGKPAVREKLMAALRGSGDEKVQMFAEKTTIDDLPPECMYGNGQVAWVRIGKIEHVMEGCACPMGALARSFLNNLIVGKDEWVLVDTEAGVEHFGRGVLEGVDAVLLVAEPSHESVVLVDKAISLCREAGKRHAVVLNKVVEEAEPVLKKMLAERGVEASGVLPYSPAISWANLWGEPLEGGLMGSEINALVGKIKGLVGLI
SIO_010081: TPH_RS00545
subclass of: SO_0000673
so part of: TPH_RS00545
location: 96869..97660
location: region:96869-97660:1
so has part: feature:96869-97660:1:exon

WP_201764468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96869-97660:1:exon

TPH_RS00550
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00550
old locus tag: Tph_c01060
so part of: sequence
location: 97680..98807
location: region:97680-98807:1
so has part: feature:97680-98807:1:exon
subclass of: SO_0000010

position:97680:1
position: 97680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98807:1
position: 98807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97680-98807:1:exon

TPH_RS00550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00550
old locus tag: Tph_c01060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015739183.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron ABC transporter substrate-binding protein
translation: MLFKHLRVGAALVALMLLIALLSGCGSVGTSQGKSTGQAEKAVITDLAGRQVEVSIPAKKVVAIGPGALRLVCYAGGAGKVVGVENLEKQQSTGRPYILAYPELKELPTIGQGGPDSTPDAEKLVSVKPDVIFVAYLVDRAKADELQAQTNIPVVVLGYGDQVPFDEDVYKSISLIGKVIGEEQRAEDVVNYLKECQADLQERTKGIPENEKPAVYVGALGMKGVHGIESTSAKYGPFVAIGARNVVDETGMQGSLMIEKEKLLAWDPEIIFIDESGLSLVRDDYRKNKNFYLSLKAFKNGNVYGQMPFNYYTTNIDTAIADAYYAGKVIFPEQFKDVDPAKKADEIYNFLLGKPLYQQMAKDYGGFIKLDLAKL
SIO_010081: TPH_RS00550
subclass of: SO_0000673
so part of: TPH_RS00550
location: 97680..98807
location: region:97680-98807:1
so has part: feature:97680-98807:1:exon

WP_015049274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97680-98807:1:exon

TPH_RS00555
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00555
old locus tag: Tph_c01070
so part of: sequence
location: 98825..99901
location: region:98825-99901:1
so has part: feature:98825-99901:1:exon
subclass of: SO_0000010

position:98825:1
position: 98825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99901:1
position: 99901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98825-99901:1:exon

TPH_RS00555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00555
old locus tag: Tph_c01070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015739182.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron ABC transporter permease
translation: MRETAVAESIPESYLRYTGRKALIICLVLLFTLLLAVYAINAGSAGLTPLEVLSTLLGMGDSRLQIIVWNIRLPRVLAAVAAGVGLSVAGCVMQNLLRNPLASPSTLGVSQGAAFGAALAIIAMGAGSIQSTSADAVIINNPYLVTVSAFVGAMLTTVVVLFLAQIRGVTPEAMVLAGVALSSLFTAATTVIQYFASDVQVASIVFWTFGDISRASWRDLGIMAAVVGASFVYFLYNRWNYNAIDGGEETAKGLGVNVERVRLVGMFVASLITAVLVSFLGVIAFVGLLGPHIMRRFLGGDHRFLIPASAAMGGFLLLASDTLARTLIAPVVLPVGAITSFMGAPLFLYLLARGYNRR
SIO_010081: TPH_RS00555
subclass of: SO_0000673
so part of: TPH_RS00555
location: 98825..99901
location: region:98825-99901:1
so has part: feature:98825-99901:1:exon

WP_028991210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98825-99901:1:exon

TPH_RS00560
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00560
old locus tag: Tph_c01080
so part of: sequence
location: 99898..100650
location: region:99898-100650:1
so has part: feature:99898-100650:1:exon
subclass of: SO_0000010

position:99898:1
position: 99898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100650:1
position: 100650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99898-100650:1:exon

TPH_RS00560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00560
old locus tag: Tph_c01080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003868051.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MILSVEGVEFSYNSHPVLKDVRFEVERGELFSILGNNGAGKSTLLRCLNRIIRPRTGSILIDGVKLSDLSRLEVARRVGYVAQRHEGSRVTVFDAVLLGRRPHIRWDATEKDMAIVREVLAALRLEEFSLRYLDELSGGELQKVIIARALAQEPRLLLLDEPTSNLDLKNQYEVLRIVKDVARERRIAVVVVMHDINLALRFADRFLLLRNGEIYACGGREVITPENIAGVYGIPVRVEQLGGVPVVVPV
SIO_010081: TPH_RS00560
subclass of: SO_0000673
so part of: TPH_RS00560
location: 99898..100650
location: region:99898-100650:1
so has part: feature:99898-100650:1:exon

WP_015049276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99898-100650:1:exon

TPH_RS14535
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS14535
so part of: sequence
location: 100960..101181
location: region:100960-101181:1
so has part: feature:100960-101181:1:exon
subclass of: SO_0000010

position:100960:1
position: 100960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101181:1
position: 101181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100960-101181:1:exon

TPH_RS14535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS14535
inference: COORDINATES: protein motif:HMM:NF015947.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MSIRKKLNIREGDYLQVYLENNEIRLRKIEPVRPLSAEDPIWRLIGAGESGKADVSEHHDRYLAEGEIRRWKK
SIO_010081: TPH_RS14535
subclass of: SO_0000673
so part of: TPH_RS14535
location: 100960..101181
location: region:100960-101181:1
so has part: feature:100960-101181:1:exon

WP_081578703.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100960-101181:1:exon

TPH_RS00570
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00570
old locus tag: Tph_c01100
so part of: sequence
location: 101169..101573
location: region:101169-101573:1
so has part: feature:101169-101573:1:exon
subclass of: SO_0000010

position:101169:1
position: 101169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101573:1
position: 101573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101169-101573:1:exon

TPH_RS00570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00570
old locus tag: Tph_c01100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011392211.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PIN domain-containing protein
translation: MEKIMVDTSAIYALLDRFDNLHQKAVSLLREISRKQLMVMLTDFIVAECHALLSSRLGPEIARAWLKGLCWPVERVTEKDEQRAKEIIFTYVDKAFSYTDAITFAVMERLGISTALAFDQHFSQYGFVLYNIDK
SIO_010081: TPH_RS00570
subclass of: SO_0000673
so part of: TPH_RS00570
location: 101169..101573
location: region:101169-101573:1
so has part: feature:101169-101573:1:exon

WP_015049278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101169-101573:1:exon

TPH_RS15290
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15290
so part of: sequence
location: 101721..101873
location: region:101721-101873:1
so has part: feature:101721-101873:1:exon
subclass of: SO_0000010

position:101721:1
position: 101721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101873:1
position: 101873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101721-101873:1:exon

TPH_RS15290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15290
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKLPLYALKKEIAVYAKGADEEIKRYSIRLRGSAGKGVKFFGFGRRRGG
SIO_010081: TPH_RS15290
subclass of: SO_0000673
so part of: TPH_RS15290
location: 101721..101873
location: region:101721-101873:1
so has part: feature:101721-101873:1:exon

WP_158502649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101721-101873:1:exon

TPH_RS00575
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00575
old locus tag: Tph_c01110
so part of: sequence
location: complement(101820..102059)
location: region:101820-102059:-1
so has part: feature:101820-102059:-1:exon
subclass of: SO_0000010

position:101820:-1
position: 101820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102059:-1
position: 102059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101820-102059:-1:exon

TPH_RS00575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00575
old locus tag: Tph_c01110
inference: COORDINATES: protein motif:HMM:NF024945.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MTRPQEVYVHPNTLRYRIKKIEELTGMKLERMEEKINLFVAVNLYELLRINGLLDNASDDDSSAAPAPAEAEELHPFTG
SIO_010081: TPH_RS00575
subclass of: SO_0000673
so part of: TPH_RS00575
location: complement(101820..102059)
location: region:101820-102059:-1
so has part: feature:101820-102059:-1:exon

WP_158502650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101820-102059:-1:exon

TPH_RS00580
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: ccsA
locus tag: TPH_RS00580
old locus tag: Tph_c01120
so part of: sequence
location: complement(102122..102904)
location: region:102122-102904:-1
so has part: feature:102122-102904:-1:exon
subclass of: SO_0000010

position:102122:-1
position: 102122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102904:-1
position: 102904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102122-102904:-1:exon

TPH_RS00580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: ccsA
locus tag: TPH_RS00580
old locus tag: Tph_c01120
inference: COORDINATES: protein motif:HMM:NF013725.2
GO function: GO:0020037 - heme binding [Evidence IEA]
GO process: GO:0017004 - cytochrome complex assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c biogenesis protein CcsA
translation: MAAIEKAFVIAALMFYAAASCCYFAGLKTNKTLRPALLLAAGGLAANLIALINRSVASGRLPLATGYEFLLCFTLITAFLYLVYEIRSKMKNAGGPVMLIAALLLAVIVIFMPEQFYVVTPLMPALKSPWLTAHVSTAVIAYGGFAFAAGLAVMQLRQKGLPDTENAIYKITAAGFAMLSLSIVLGAIWAEQAWGSYWSWDPKEIWALITWIIYAIYLHLHRQRLLSGSGACYMVIAGFIIVLFTFFGVNYLMSGLHSYG
SIO_010081: TPH_RS00580
subclass of: SO_0000673
so part of: TPH_RS00580
location: complement(102122..102904)
location: region:102122-102904:-1
so has part: feature:102122-102904:-1:exon

WP_015049280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102122-102904:-1:exon

TPH_RS00585
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00585
old locus tag: Tph_c01130
so part of: sequence
location: complement(102957..104012)
location: region:102957-104012:-1
so has part: feature:102957-104012:-1:exon
subclass of: SO_0000010

position:102957:-1
position: 102957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104012:-1
position: 104012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102957-104012:-1:exon

TPH_RS00585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00585
old locus tag: Tph_c01130
inference: COORDINATES: protein motif:HMM:NF016995.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c biogenesis protein ResB
translation: MITVTDAYRFLSSMKTGLVLLGLIGLASAAGSVIRPDSFFRTGLFKLLLMLLLLNMALCTCNRLAGYLKRSGRSGTKSRLRFRELGILLLHAGIVLVLIGGAVYAGYGQTGMISLAEGETAAISDYLKTDNPFTLRLDKFTIEFNPDGSPSQYYSYVSILDGGKETEYRIGVNSPLQYEGIKAYQQSFGYLIEAEGSGVNGERVSRTLREGEMIDVPGTERKVKAYRYIPNFDPRYGMNSKTLRPDNPKIIYSVYEKGHLLGVGAASPGESVVIADGCAVHFRDVRMYTVLKVKSDPGLSLAAAGGLMLMAGVVITVFLSPANRKRRTMTANGGPAGPGAGNGGNAAVPGS
SIO_010081: TPH_RS00585
subclass of: SO_0000673
so part of: TPH_RS00585
location: complement(102957..104012)
location: region:102957-104012:-1
so has part: feature:102957-104012:-1:exon

WP_015049281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102957-104012:-1:exon

TPH_RS00590
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00590
old locus tag: Tph_c01140
so part of: sequence
location: complement(104541..105824)
location: region:104541-105824:-1
so has part: feature:104541-105824:-1:exon
subclass of: SO_0000010

position:104541:-1
position: 104541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105824:-1
position: 105824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104541-105824:-1:exon

TPH_RS00590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00590
old locus tag: Tph_c01140
inference: COORDINATES: protein motif:HMM:NF037653.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MSALKQGENYWIEAVLEKKNLDAVINFLHNITGKPVRITDRTGKVYACSEGVKMASADDHFVDIPQNGNSILIYDPAQRDLYYRADSSDGEAWIIIGNTGEAEYPAWLPYLEEVATAVKICIFIAHEKENMEHQFKKKLIEDILLWNASEIKELIRQNKYCLDLDKLYFVSIMEPVLDSKTDMETLYKHTLEWLKYHEDVVICSVWNEKYIIFICPNKYDLQTLESDDNWDNYLSYIRKHQKDIAKRFNIPTYFGIGRKYLITELHKSYQEALTALNISKLTGKKNSVTHYLNLGVFKLINLQETAMLRQFCAENLGRLLEHDRTTKGELLQTLRVLCDTDFDVNAAAQKMFLHFNTLRYRIKKIEELTGRQLDRILDRLNLFVAVKLHDLLLLNGLLGEPGSAEKEAADSTANNPAAQLMRRRSCL
SIO_010081: TPH_RS00590
subclass of: SO_0000673
so part of: TPH_RS00590
location: complement(104541..105824)
location: region:104541-105824:-1
so has part: feature:104541-105824:-1:exon

WP_028991207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104541-105824:-1:exon

TPH_RS00600
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00600
old locus tag: Tph_c01160
so part of: sequence
location: 106385..108043
location: region:106385-108043:1
so has part: feature:106385-108043:1:exon
subclass of: SO_0000010

position:106385:1
position: 106385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108043:1
position: 108043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106385-108043:1:exon

TPH_RS00600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00600
old locus tag: Tph_c01160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015050458.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MEEAKKGISRRSFLKGVAVGAAGIAAAGALAGCGEETGTKTPPKEGEEPKKLSFEVPPEPIPEKDIKETVTADVVVVGAGLAGLCAALSAAEAGAKTVVVEKRETFTARGMHNAAVGSRVQKKLGIEIDKRQAVRDIVKWCGNRVKEELHWLFVNKSGECMNWLLDMTEAEGITAEMWAAHYKGPDYYEYPVTHIFVGGPNAAKFAHNVDVATVLEKNAKKKGVDFYYKTPAEQLIRPDNGRVGGVIAKNEKGEYIRFEAKKAVILCAGDYSGDKEMLEYYSPMALRADAYVYTPVGVNTGDGHKMGMWIGAAMQQDYPHPAMIHTQAGAWSYCFLHVNKHGYRYENEDKTAQAVCMSKMMQPDNIGWAVYDSKFLDLLPETIKIGGGMFWDQVNRTWGKPFNKEAERAMLERHIKQGLVVTADTIEELAQKMKVPSENLKATVERYNQLAVMKDDVDFGKRSELLFPIDKPPFYAGLMKSALLVVVGGLCVNAKMQVLDKKGNVIPGLYAAGNNAGSFFAQDYPTIFPGHSHGRCITFGRLAGQYAAAERV
SIO_010081: TPH_RS00600
subclass of: SO_0000673
so part of: TPH_RS00600
location: 106385..108043
location: region:106385-108043:1
so has part: feature:106385-108043:1:exon

WP_015049284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106385-108043:1:exon

TPH_RS00605
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00605
old locus tag: Tph_c01170
so part of: sequence
location: 108370..110031
location: region:108370-110031:1
so has part: feature:108370-110031:1:exon
subclass of: SO_0000010

position:108370:1
position: 108370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110031:1
position: 110031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108370-110031:1:exon

TPH_RS00605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00605
old locus tag: Tph_c01170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015050458.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MEKENKKGISRRTFIKSMAVGAAGVAAAGALAGCGEKEPSTSGGAKAEKEARYSFEVPPEPIPAKNIKKTLEADVVVVGAGLSGLSAAVRAREKGAKVIVIEKGSSWTGRGGHFGVAESRVMKKMGIVNDKKEIARAWIAQCGNRANEELVWLFLNRSGEAMDWLLDKAEAANLTVGILDAYYKGPTYREYPGTHMFLGGPMMKEGKEPGQDVSLLLYNEAKRLGVEFYFKTPGEQLVKEGNRVVGVIAKAEDGYYRFNASKGVVLATGDIGGDKEMCEALAPLALKANGSQYYPVGQNTGDGHKMGLWVGGTFEDPPFAAVIHPQAFSWLSYFFLFVNQQGKRFMNEDTWVQAKSLGAMRQPGKGPWAFVIFDSKWPEEVAASLPIGGGMFWDSMGRLVGQKWTPDADRKTIEGYIEGGKIGWMADTIEELAGKIGVPAENLKATVERYNELARAKNDVDFGKRSELLTTIEKPPYYALKFGGALLVVTGGLNVDVKLRVLDKDHNPIPGLYAVGNVSGGLYGVDYPTTIPGNSHGRALTWGYLVGSTVMEG
SIO_010081: TPH_RS00605
subclass of: SO_0000673
so part of: TPH_RS00605
location: 108370..110031
location: region:108370-110031:1
so has part: feature:108370-110031:1:exon

WP_015049285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108370-110031:1:exon

TPH_RS00610
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00610
old locus tag: Tph_c01180
so part of: sequence
location: 110162..110710
location: region:110162-110710:1
so has part: feature:110162-110710:1:exon
subclass of: SO_0000010

position:110162:1
position: 110162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110710:1
position: 110710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110162-110710:1:exon

TPH_RS00610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00610
old locus tag: Tph_c01180
inference: COORDINATES: protein motif:HMM:NF025890.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c3 family protein
translation: MEVKNSESQAKKRAFLTPKRILIVVGVVLALGVVGAIALNQLSKNPAFCGTCHIIKPYYESWKNSNLLANKHAAQGVECLDCHHKSYLEKAQEGINYITGNYSEPLEKLTFTREQCLECHEEDYEQAVAATEFEESNPHDSHMGEIECTQCHQMHDKSKVMCSQCHTFSWFEELDDSWEIES
SIO_010081: TPH_RS00610
subclass of: SO_0000673
so part of: TPH_RS00610
location: 110162..110710
location: region:110162-110710:1
so has part: feature:110162-110710:1:exon

WP_236608840.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110162-110710:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 1089553
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01055
inference: COORDINATES: profile:INFERNAL:1.1.1
note: molybdenum cofactor riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: molybdenum cofactor
so part of: sequence
location: 111010..111144
location: region:111010-111144:1
so has part: feature:111010-111144:1:region

position:111010:1
position: 111010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111144:1
position: 111144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111010-111144:1:region

TPH_RS00615
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00615
old locus tag: Tph_c01190
so part of: sequence
location: 111199..112248
location: region:111199-112248:1
so has part: feature:111199-112248:1:exon
subclass of: SO_0000010

position:111199:1
position: 111199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112248:1
position: 112248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111199-112248:1:exon

TPH_RS00615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00615
old locus tag: Tph_c01190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011392937.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron ABC transporter permease
translation: MQPVLLCRIMRLKTTTVWWNYLLLFITLLALIFISLLLGRYPITPEQIVGILKAELFFSDRAVPDTVSTVFMEIRLPRIIAALLIGAALSVSGAVYQGTFKNPMVSPDILGASAGAGFGAALAILCSWGMKGIHIASFVCGLLAVFLTYFISTRIKSGDSSLILVLTGIFVGTVFSSLISLFKAVADPYNKLPAITYWLMGSLVSIKWSSIKLMILPVLTSSIVLYLVRWHLNIISFGDEEAQALGVDTGKLRIIVILCATLLTTSAVSVSGMIGWVGLVIPHLARALIGPDYQNLLPVSILVGGSFLLLVDTMARSLLPMEIPLGILTSLIGAPFFLYLLTKTRKGWR
SIO_010081: TPH_RS00615
subclass of: SO_0000673
so part of: TPH_RS00615
location: 111199..112248
location: region:111199-112248:1
so has part: feature:111199-112248:1:exon

WP_015049287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111199-112248:1:exon

TPH_RS00620
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00620
old locus tag: Tph_c01200
so part of: sequence
location: 112245..113027
location: region:112245-113027:1
so has part: feature:112245-113027:1:exon
subclass of: SO_0000010

position:112245:1
position: 112245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113027:1
position: 113027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112245-113027:1:exon

TPH_RS00620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00620
old locus tag: Tph_c01200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049324.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MKLKLQDLAFAYEKNNEVLRGVTLEVESGEVLCLLGPNGAGKTTLFKSILGLLKPSKGKVLIDGKDVRDYPRKELAHYLGYVPQNHIPPFPFRVLEVVLMGRTAHINNFAVPSTVDVEIAREAMRRLNIGHLENRNYAEISGGERQLVLIARALAQKPGILVLDEPTSNLDFGNQLRILRHIKRLAESGLTVVMSSHFPEHAFYCGSKVAVMQKGRIIHVGRPEEVITGQNLKEIYGVEVEVAEIERKGINYRVCIPSVV
SIO_010081: TPH_RS00620
subclass of: SO_0000673
so part of: TPH_RS00620
location: 112245..113027
location: region:112245-113027:1
so has part: feature:112245-113027:1:exon

WP_015049288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112245-113027:1:exon

TPH_RS00625
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00625
old locus tag: Tph_c01210
so part of: sequence
location: 113114..114205
location: region:113114-114205:1
so has part: feature:113114-114205:1:exon
subclass of: SO_0000010

position:113114:1
position: 113114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114205:1
position: 114205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113114-114205:1:exon

TPH_RS00625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00625
old locus tag: Tph_c01210
inference: COORDINATES: protein motif:HMM:NF013648.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MMKKIIAVLCCLVIILSAAGCGEKTGNGNSSAGSEENVSVVDMAGRTVTVPKKINKVFSTSAAGAIFIYSLAPEKLAGWNNELREVEKKYILPEYRELPVLGTWKGTNFTGSIEELMKVAPDVIISMGDVSPKYTADAEEIEKRLGIPVIMVDGSLKNLDQAYEFVGKLLGEESRAQKLAEYCSHTYAEIDRWLQKLPENERVRLYYAEGPTGLETDIKGTVNSEAIDLAGAVNVATSGLDENVRRIQVSIEQILTWDPEVIIISTDADAKHEVYNTILTSGEWKGVRAVQNQKVYEIPCEPYDWISRPPSIFRILGVKWLANLLYPDLYEVDLIEETKQFYKEFFHYELTDQEAAKLLNPVV
SIO_010081: TPH_RS00625
subclass of: SO_0000673
so part of: TPH_RS00625
location: 113114..114205
location: region:113114-114205:1
so has part: feature:113114-114205:1:exon

WP_028991206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113114-114205:1:exon

TPH_RS00630
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00630
old locus tag: Tph_c01220
so part of: sequence
location: 114233..114748
location: region:114233-114748:1
so has part: feature:114233-114748:1:exon
subclass of: SO_0000010

position:114233:1
position: 114233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114748:1
position: 114748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114233-114748:1:exon

TPH_RS00630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00630
old locus tag: Tph_c01220
inference: COORDINATES: protein motif:HMM:NF015239.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotide kinase
translation: MKNVFLTGERKIGKSTIIKKALEAFKGSLGGFKTAPCFLGDGSKRYTIEGLNPIFRGEARWICVDNGEGRMIGLAGTFEDYGVRILKHSLKERPDLVIMDELGLFESEAINFQEHVFDLLGSPLPVLGVLKAASSSFLNEIRNRRDVIILPVTGENRDLLAEKVAGWLQDL
SIO_010081: TPH_RS00630
subclass of: SO_0000673
so part of: TPH_RS00630
location: 114233..114748
location: region:114233-114748:1
so has part: feature:114233-114748:1:exon

WP_015049290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114233-114748:1:exon

TPH_RS00635
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00635
old locus tag: Tph_c01230
so part of: sequence
location: 114941..115942
location: region:114941-115942:1
so has part: feature:114941-115942:1:exon
subclass of: SO_0000010

position:114941:1
position: 114941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115942:1
position: 115942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114941-115942:1:exon

TPH_RS00635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00635
old locus tag: Tph_c01230
inference: COORDINATES: protein motif:HMM:NF015983.2
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: radical SAM protein
translation: MLASDIRRIVDRARAGKQLGPDEIGELFSVPLVSEEAYYIQYVGREMSREASGGKAEIHAQIGIDNQACPNNCEFCSFAACNGVFKKPSIASLEEILERARDFEKNGANAILLMTTVAFPFEDFIVIAREVKRHLQEDTVLIANLPDFGYQEAMALKDAGVNGIYHAVRLGEGEVTRIEPAKRLNTIKAAKQAGLKVCTCLEPVGPEHTIEELVEKTLICRDIEPVFSGAGRRISVPGSRLERFGMVSEARMALYVAVVRLAMGYGAPLNCTHEPNVPAAIAGADIIWAEAGTNPRDTDQKTEKSRGFNVQRCRQIFKEAEWEVYEGPSQYFL
SIO_010081: TPH_RS00635
subclass of: SO_0000673
so part of: TPH_RS00635
location: 114941..115942
location: region:114941-115942:1
so has part: feature:114941-115942:1:exon

WP_015049291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114941-115942:1:exon

TPH_RS00640
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00640
old locus tag: Tph_c01240
so part of: sequence
location: 116000..118168
location: region:116000-118168:1
so has part: feature:116000-118168:1:exon
subclass of: SO_0000010

position:116000:1
position: 116000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118168:1
position: 118168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116000-118168:1:exon

TPH_RS00640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00640
old locus tag: Tph_c01240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049296.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin-dependent oxidoreductase
translation: MACNLCHKSCGMLACLENGAIVEIADDPDYPFNKGAQCSKGASALEELDHPNRINYPLKRVGERGSGEFTRVSWEEALDDIAGKLERLKKEYGAEAISTIGGTNRTDDFARRRFFNLLGSPNVAHTVPACWIPNFLIEAASYGWGACDNNVAGGARCAVIWGYNPGATYVNEMEKILRARETFGTKIIVIDPRFSETAAKADLWLPIRPNSDNALALAWLNVIINEGLYDAEFVSEWTVGFGELAERVEEYTPEWAAEKTGVSAELIAEAARMYATSKPACLMWGVATDQLGRGSTAGAQARVALRAICGNLDVPGGDVMPGPHPTFITDWEMELNEKLPEEQRAKQLGSDRFKLNSWPGYRLISENLERVWGKSIPAEWFCEANPPVLFRAMATGEPYPVKAAIVLADNPLVSYANTKLVYQALKSLELLVVMEYWMTPTAVLADYVLPAASWLERPVLTTTYGVSDWLIASERAIEPLYERKTDYELWRELGLRLGQGEYWPWEREEEVFKHRLEKLGYEIESYEEFVHNYRYDFAPREYRKYLERGFATPSGKVELKNSILEKLGYDPLPHYVEPPFSPEARPELAEDYPLVLITGGSFQGGKKRNEKKALPEEPTVAINPQLAKALAAQEGDWIWIETPVGKVRQRVMITDAVAPGVIQAPRGRWFSERKADADDIARIFEFNINVCLDDDPDTCDEACGSWCTRGVLCRAEKVNKEE
SIO_010081: TPH_RS00640
subclass of: SO_0000673
so part of: TPH_RS00640
location: 116000..118168
location: region:116000-118168:1
so has part: feature:116000-118168:1:exon

WP_236608804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116000-118168:1:exon

TPH_RS00645
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00645
old locus tag: Tph_c01250
so part of: sequence
location: 118510..119358
location: region:118510-119358:1
so has part: feature:118510-119358:1:exon
subclass of: SO_0000010

position:118510:1
position: 118510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119358:1
position: 119358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118510-119358:1:exon

TPH_RS00645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00645
old locus tag: Tph_c01250
inference: COORDINATES: protein motif:HMM:NF021365.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2064 domain-containing protein
translation: MQNAIVVFTKVPRAGDIKTRLTTERGGILTPEEAKQFYEACLLDVIDCCIASNSGDLYICYNLNGDRDYLEKMLASVSDRRAIKGVYADRGGTFDRCMQYAADYILKGENGGRLADSVIIVGGDLPTLQPATLREAVSRMERLAASDSGKKAAKNAQGSGAAIGAAIVEGACQEGGFSLVGYTCNTPFEFEGVFYNKDGVTALDMLVYKATEQGIPFGMVEMIPDVDIPLDLASMLSSLNALQLAARFDGGVFIPKRTIQMIREMGLEASAAPSLMEGSRER
SIO_010081: TPH_RS00645
subclass of: SO_0000673
so part of: TPH_RS00645
location: 118510..119358
location: region:118510-119358:1
so has part: feature:118510-119358:1:exon

WP_015049293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118510-119358:1:exon

TPH_RS00650
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00650
old locus tag: Tph_c01260
so part of: sequence
location: 119355..120434
location: region:119355-120434:1
so has part: feature:119355-120434:1:exon
subclass of: SO_0000010

position:119355:1
position: 119355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120434:1
position: 120434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119355-120434:1:exon

TPH_RS00650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00650
old locus tag: Tph_c01260
inference: COORDINATES: protein motif:HMM:NF014774.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: (Fe-S)-binding protein
translation: MRDGIKSALSQLEQECLDCGACAEVCDLLAELTDSPGELARRGIDVYLAYSCFLCDRCAAACPLELRPSALFAARRMAAVEKGEIDPEEYNYLLPDRKEHVMQLYRSYCGIDYGDLEAEKGAEICFFPGCTLMTYSPVLTREVFKRLEDECGCRGMLTDCCGKPLSQMGLEERAAESSRNLVDKVKCLGVKRIVVACPGCYYYLYEILGQEEIEILTVYEVLDFTEITAENAPLCTVHDSCPDRFKGVFSKGVRAALKKSGFSVVEMTANRGDTPCCGSGGQVSHFRPELAEKLIEVRLREAEKSGARVLLAYCLSCVLNFATRPSGVKVRHVLNLLLGLDEDYSDVKTKVLKILENAG
SIO_010081: TPH_RS00650
subclass of: SO_0000673
so part of: TPH_RS00650
location: 119355..120434
location: region:119355-120434:1
so has part: feature:119355-120434:1:exon

WP_015049294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119355-120434:1:exon

TPH_RS00655
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00655
old locus tag: Tph_c01270
so part of: sequence
location: 120482..121438
location: region:120482-121438:1
so has part: feature:120482-121438:1:exon
subclass of: SO_0000010

position:120482:1
position: 120482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121438:1
position: 121438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120482-121438:1:exon

TPH_RS00655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00655
old locus tag: Tph_c01270
inference: COORDINATES: protein motif:HMM:NF014635.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF169 domain-containing protein
translation: MDNQRMAEALRRTLGLRWSPVALRLLKRGEEIPKGLVEPPMPLRHCQSIIVARRGNSLYLPPRKHACPDGAGILGLVEMSPKLRSGELYLLFKKLPNLECARKMIAGRPEFAPGSYAATALAPLETAAFVPDVVIFTLWPEQAMWLCCAQTYTSGERQVFYTSGYNSTCADLTVKVMQSGKMNISFGCYGARASSEIDDFELYVSVPYGMLPLLVEALEKLALKSIPEERNKIYIHPVMDNVSKPSEEASGAVELEVNWEACDGCGLCQAFCPGNVFEMKTVNRAKKAYPAFVERCSACYTCVGQCPHKAIQLRHRGV
SIO_010081: TPH_RS00655
subclass of: SO_0000673
so part of: TPH_RS00655
location: 120482..121438
location: region:120482-121438:1
so has part: feature:120482-121438:1:exon

WP_028991204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120482-121438:1:exon

TPH_RS00660
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00660
old locus tag: Tph_c01280
so part of: sequence
location: 121552..123750
location: region:121552-123750:1
so has part: feature:121552-123750:1:exon
subclass of: SO_0000010

position:121552:1
position: 121552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123750:1
position: 123750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121552-123750:1:exon

TPH_RS00660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00660
old locus tag: Tph_c01280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049292.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin-dependent oxidoreductase
translation: MSQVKKVACHFCHMNCGMLAHVEDGVVVKVTGDPEHPTNAGTQCARGVSALDHLYHPNRINYPLKRVGERGSGKFVRVSWDEALDDISARIKRLISEYGAETISTIGGTNRTDDFARRRFFNLLGSPNVTHTAPVCWIPNFLAETISYGWGSFDAEVMNGSRCVVVWGHNPGASYLPEMRGLLLAREMFGTKIIVIDPRFSETAAKADLWLPIRPNSDNALALAWLNVIINEGLYDAEFVSEWTVGFGELAERVEEYTPEWAAEKTGVSAELIAEAARMYATSKPACLMWGVATDQLGRGSTAGAQARVALRAICGNLDVPGGDVMPGPHPTFITDWEMELNEKLPEEQRAKQLGSDRFKLNSWPGYRLISENLERVWGKSIPAEWFCEANPPVLFRAMATGEPYPVKAAIVLADNPLVSYANTKLVYQALKSLELLVVMEYWMTPTAVLADYVLPAASWLERPVLTTTYGVSDWLIASERAIEPLYERKTDYELWRELGLRLGQGEYWPWEREEEVFKHRLEKLGYEIESYEEFVHNYRYDFAPREYRKYLERGFATPSGKVELKNSILEKLGYDPLPHYVEPPFSPEARPELAEDYPLTLIAGGGFNPFFHSEHREITRLRLVSPYPRLAINPSLAERYGIKDGDWVWIETPTGKVKQRAVLTEAVAPDTVQAERGWWYPEKEISDPELMGVFESNINVCLDDDPDTCDEACGSWCTRGVRCRISKVEGS
SIO_010081: TPH_RS00660
subclass of: SO_0000673
so part of: TPH_RS00660
location: 121552..123750
location: region:121552-123750:1
so has part: feature:121552-123750:1:exon

WP_015049296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121552-123750:1:exon

TPH_RS00665
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00665
old locus tag: Tph_c01290
so part of: sequence
location: 123750..124292
location: region:123750-124292:1
so has part: feature:123750-124292:1:exon
subclass of: SO_0000010

position:124292:1
position: 124292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123750-124292:1:exon

TPH_RS00665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00665
old locus tag: Tph_c01290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011393407.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S dicluster domain-containing protein
translation: MRWGMLIDLNKCVGCYACTVACQQEHRLSLGEKWNRVLRVGPDGKFPNLTAYFLPVPCMHCEEAPCVDGCPTGASFRREDGIVVVDEKKCVGCKFCMVACPYGVRFYSEEKGIVEKCTMCFERLDKGEVPRCVETCPVKARYFGDLDDPNSEIAQLIRKKNAHPLHEELGTKPAVYYIFP
SIO_010081: TPH_RS00665
subclass of: SO_0000673
so part of: TPH_RS00665
location: 123750..124292
location: region:123750-124292:1
so has part: feature:123750-124292:1:exon

WP_015049297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123750-124292:1:exon

TPH_RS00670
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: nrfD
locus tag: TPH_RS00670
old locus tag: Tph_c01300
so part of: sequence
location: 124305..125273
location: region:124305-125273:1
so has part: feature:124305-125273:1:exon
subclass of: SO_0000010

position:124305:1
position: 124305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125273:1
position: 125273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124305-125273:1:exon

TPH_RS00670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: nrfD
locus tag: TPH_RS00670
old locus tag: Tph_c01300
inference: COORDINATES: protein motif:HMM:NF015851.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysulfide reductase NrfD
translation: MENKQEYWGALAAGNFFLAALGAMMFIIAGVLDLAGTAVAQLINGWVSLAAVVVAGIGAMLLTVELGNKMKFYLVMTKPSSIMSLGSIAMSAFMVIAFVYATTFFEFIPWYPAYGLREVLAVLGIVAAAVLVAYPGLELGEARGRSFWNGSGLVPLFLVYGAASGIAGVLLISMILGQAQDPAILRLNGGVLFGFIAAQAVLLAGYLMGVSNTGAEEAKRAVAAILRGSLRTKFWWGVVAAGLAVPLIIYLCGNNPALTAVKAVLILVGCACFRCVFLQAAVRRSLPGEENEWMNVQEEAELGLRLEQRWKEKEAWLYGGDR
SIO_010081: TPH_RS00670
subclass of: SO_0000673
so part of: TPH_RS00670
location: 124305..125273
location: region:124305-125273:1
so has part: feature:124305-125273:1:exon

WP_015049298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124305-125273:1:exon

TPH_RS00675
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00675
old locus tag: Tph_c01310
so part of: sequence
location: 125270..125755
location: region:125270-125755:1
so has part: feature:125270-125755:1:exon
subclass of: SO_0000010

position:125270:1
position: 125270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125755:1
position: 125755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125270-125755:1:exon

TPH_RS00675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00675
old locus tag: Tph_c01310
EC number: 2.3.1.-
inference: COORDINATES: protein motif:HMM:NF025054.2
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MRGLKGKTEVALSGKIDEADLKEILAEHDLAVRGDVSDYVVLKIDGRLCAAGRLVLSGRNCFHLEVFGVRGELRGRGIGGLLLSEIIKRPWKYCREAEGGGDYKSYRLTTVARGGAAGFYEKHGFRAFSFAALPPPYNTQCDDCPDRETCRPLPMVLEKER
SIO_010081: TPH_RS00675
subclass of: SO_0000673
so part of: TPH_RS00675
location: 125270..125755
location: region:125270-125755:1
so has part: feature:125270-125755:1:exon

WP_015049299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125270-125755:1:exon

TPH_RS00680
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00680
old locus tag: Tph_c01320
so part of: sequence
location: 125766..126554
location: region:125766-126554:1
so has part: feature:125766-126554:1:exon
subclass of: SO_0000010

position:125766:1
position: 125766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126554:1
position: 126554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125766-126554:1:exon

TPH_RS00680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00680
old locus tag: Tph_c01320
inference: COORDINATES: protein motif:HMM:NF024118.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBL fold metallo-hydrolase
translation: MPELILLGTGAGPGVPSFFCSCPGCREAWQKNEYSRTRSGAALKTGKRTLLIDASPDLRAQLVREKISVVDGVFLTHWHYDHYAGLGELEYYVKLERRERLPLYLPPSAVQQFNGAFPNLAEVFSLTPWRFFNGYDFDGITLTPLPANHGVETAGLLVESGGSRVAYFTDTAGLPESSAEKVRGVDLLICDATFYGENWFPESHMSVDEAIELGKKVEAKRTILTHLSIHYSRAVTSEELEEELAEHPDVDVARDGLRLELL
SIO_010081: TPH_RS00680
subclass of: SO_0000673
so part of: TPH_RS00680
location: 125766..126554
location: region:125766-126554:1
so has part: feature:125766-126554:1:exon

WP_015049300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125766-126554:1:exon

TPH_RS00685
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00685
old locus tag: Tph_c01330
so part of: sequence
location: 126690..127268
location: region:126690-127268:1
so has part: feature:126690-127268:1:exon
subclass of: SO_0000010

position:126690:1
position: 126690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127268:1
position: 127268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126690-127268:1:exon

TPH_RS00685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00685
old locus tag: Tph_c01330
inference: COORDINATES: protein motif:HMM:NF013756.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flavin reductase family protein
translation: MKRSLGSRSIAYPVPVWVIGTYDREGKPNVATAAWVGICASEPPAVCVSLRKERYTHANILDRKAFTVNIPSEDYLKETDYFGLTSGFRHNKTAETGLTPVKGDLVDAPYLKEFPCVIECKLLGHTDVGSHTAFIGEILDVKMDEEMLKEDGTPDVEKLKPLVLIPGSASYYGVGKYLGKAYSVGKYCCSVT
SIO_010081: TPH_RS00685
subclass of: SO_0000673
so part of: TPH_RS00685
location: 126690..127268
location: region:126690-127268:1
so has part: feature:126690-127268:1:exon

WP_015049301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126690-127268:1:exon

TPH_RS15805
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15805
pseudo: true
so part of: sequence
location: complement(127652..>128173)
location: region:127652-128173:-1
so has part: feature:127652-128173:-1:exon
subclass of: SO_0000010

position:127652:-1
position: 127652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128173:-1
position: 128173
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127652-128173:-1:exon

TPH_RS15805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011876571.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: TPH_RS15805
subclass of: SO_0000673
so part of: TPH_RS15805
location: complement(127652..>128173)
location: region:127652-128173:-1
so has part: feature:127652-128173:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:127652-128173:-1:exon

TPH_RS00695
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00695
old locus tag: Tph_c01340
so part of: sequence
location: 128693..130804
location: region:128693-130804:1
so has part: feature:128693-130804:1:exon
subclass of: SO_0000010

position:128693:1
position: 128693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130804:1
position: 130804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128693-130804:1:exon

TPH_RS00695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00695
old locus tag: Tph_c01340
inference: COORDINATES: protein motif:HMM:NF025885.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma 54-interacting transcriptional regulator
translation: MPFSSVNYSLVDKATHKRIEIRKMTKERWEGILEVKEKFLQNEIGEDELLSCSYLEPEVAKSWIRSRNYGVDHKRVILRCEAKSKFKEKLKRNEALIKIVKPLREIFKNFVEASGYGFQLYDKNGLILLGDGEVIKVKNNVTKGLCLKEGIILNEKNIGTNSHSLCALLRRPVQLIGIENYWDELANTMASAAPIIGEDGEVGGVLLLWQWLVCEPWNENFQRLFSHMLGLVTSIAVAIETQLRLLKSYEELKIANDSLAMTNRMLETTLSLIDDGIITVDRNGKITCVNQEGAQILNLKPDDIGRRNITEFVENTSSFMDLLKKGESAAIEEVVKNKDENYIISIRPVYTNDKNKQINAAVLEFSRAKKVNALVTSRSGAAASFSFDDIVGVSEAITRAKEKAKRFAGCKENILIIGESGTGKELFAQAIHNWYCPEGPFVAVNCAALPRELIESELFGYEGGSFTGADRHGRPGKIELAEGGTLFLDEIGDMPIELQAVLLRVLEDKKVMRVGGRRFKKVDFRVIAATNSDLNKMVREKLFREDLYYRLSVLRVDIPPLRDRGKDKEILARYFIEKYCKKIGRKTPQISPTVRKLIYEYKWPGNVRQLENAVIFAINVSKGDVIEVRDLPDEIRSDFSSDHLRICNHNQSNKRVLLLTEMEKNAIVEALSETKGNIPRAAELLGISKSTVYRKLKEYNISV
SIO_010081: TPH_RS00695
subclass of: SO_0000673
so part of: TPH_RS00695
location: 128693..130804
location: region:128693-130804:1
so has part: feature:128693-130804:1:exon

WP_015049302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128693-130804:1:exon

TPH_RS14975
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS14975
so part of: sequence
location: complement(130979..131170)
location: region:130979-131170:-1
so has part: feature:130979-131170:-1:exon
subclass of: SO_0000010

position:130979:-1
position: 130979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131170:-1
position: 131170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130979-131170:-1:exon

TPH_RS14975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS14975
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNSGSIKTIMEILSLIVVVIVNGKRYFPRNQNEQALNMLRWAGYDPVDVYLKPLPWYPERDK
SIO_010081: TPH_RS14975
subclass of: SO_0000673
so part of: TPH_RS14975
location: complement(130979..131170)
location: region:130979-131170:-1
so has part: feature:130979-131170:-1:exon

WP_148275801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130979-131170:-1:exon

TPH_RS00700
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00700
old locus tag: Tph_c01350
so part of: sequence
location: 131306..132976
location: region:131306-132976:1
so has part: feature:131306-132976:1:exon
subclass of: SO_0000010

position:131306:1
position: 131306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132976:1
position: 132976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131306-132976:1:exon

TPH_RS00700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00700
old locus tag: Tph_c01350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049303.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1634 family transposase
translation: MWYNVGMYIRTIQRKNKDGSVVRYIQLAHNQWDPQARCAKAKVLFNFGREEEVDREALKRLVKSINRFLGPEETLRYEAERTAAPLKFITSRPLGGAWVLDRLWEELGIKGVLESLLKKRQYKTPVERAIFAMAANRALDPMSKRGVEEWVKEDAVIPGVEEIPLQQLYRAMDFLLENEAELQKQVYYSVANLLNLEVDILYFDTTSTYFEIEDEDGDGGLRRRGHSKDRRPDLPQAVIGLAVTRDGIPVRCWVWPGNTADISVVEQVKKDLIGWKLGRVITVLDRGFNSEDNLRCLQRAGGHYIAGEKLRSGKENTVQALKRAGRYQTVRDNLEVKEIVVGNGEARERYILVRNPEEAARDKARREKIIKELEEQLPLIKTHAKAVCELMAHPVYGRYLKVDSRSLPKIDRAKIREEEKLDGKYLLRTSDDTLSAEDVALGYKQLLLVEDAFRTLKSRLELRPVYHRLEDRIRAHVLLCWLALLLIRIAENRTGQTWCSLRATLQRMHLGEFSGTAGQVRQRTETTPAQKQIFKALAVKEPPLLFSINPTAKKNA
SIO_010081: TPH_RS00700
subclass of: SO_0000673
so part of: TPH_RS00700
location: 131306..132976
location: region:131306-132976:1
so has part: feature:131306-132976:1:exon

WP_081578547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131306-132976:1:exon

TPH_RS00705
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00705
old locus tag: Tph_c01360
so part of: sequence
location: 133128..133655
location: region:133128-133655:1
so has part: feature:133128-133655:1:exon
subclass of: SO_0000010

position:133128:1
position: 133128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133655:1
position: 133655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133128-133655:1:exon

TPH_RS00705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00705
old locus tag: Tph_c01360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGRLRRYRERIEYEMQSVKLKSVHGIIMHTLQQEFGRSRLESEVLASRSIDWLNALDVPVVPGQMRLSVPSTISRRYALSHRCEVTITAVNAGEDTEVWQEFGLAAMQRRRLLRWLYEIHRQGGWAGLTELAAWANLTPTALGNRLAPVRKLGIWLPHVGGPPPTRTTWPWSHGL
SIO_010081: TPH_RS00705
subclass of: SO_0000673
so part of: TPH_RS00705
location: 133128..133655
location: region:133128-133655:1
so has part: feature:133128-133655:1:exon

WP_015049304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133128-133655:1:exon

TPH_RS00710
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00710
old locus tag: Tph_c01370
so part of: sequence
location: 133697..134719
location: region:133697-134719:1
so has part: feature:133697-134719:1:exon
subclass of: SO_0000010

position:133697:1
position: 133697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134719:1
position: 134719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133697-134719:1:exon

TPH_RS00710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00710
old locus tag: Tph_c01370
inference: COORDINATES: protein motif:HMM:NF019515.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1670 domain-containing protein
translation: MLGLTTGSWEAVLRRFAQLVTEAETPSGEAHLAKKFGLSCLEVCQFLQMARQYRKHRLFRELQACYGRPEGVNTLPPSEIEAELVRHYGFSPVAARLYHRWLVEFAARIGKSPLAPGEIIFLAISADEGARAKLAEAQHIPLRLRYFTTEDALEGPYGGSRHRVAGLKFGRILRFATEARAQGALLTLPDLAVLMGIHVDAIRRQLLAHPEVVVPTRGRVKDIGRGVTHKTKIVELYLEMHTETEIVERTDHTYESVEAYLKEFARVVTLADQGLKPVMIRRVTGRSMALVQAYLDLYRRYNQPDYYFRLAQLRNVFARDETPGQKKGRLFRSPTGGAGL
SIO_010081: TPH_RS00710
subclass of: SO_0000673
so part of: TPH_RS00710
location: 133697..134719
location: region:133697-134719:1
so has part: feature:133697-134719:1:exon

WP_015049305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133697-134719:1:exon

TPH_RS00715
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00715
old locus tag: Tph_c01380
so part of: sequence
location: 134716..135906
location: region:134716-135906:1
so has part: feature:134716-135906:1:exon
subclass of: SO_0000010

position:134716:1
position: 134716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135906:1
position: 135906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134716-135906:1:exon

TPH_RS00715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00715
old locus tag: Tph_c01380
inference: COORDINATES: protein motif:HMM:NF019515.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1670 domain-containing protein
translation: MNWQEGVFGPLLAHTLENAQVRHLAEHYDFSRDSRLAQAIVKHTNQVLDAEEKRRQVLRVRPGELLLRTWRGLLILPLRTPEDVSRVVAGERWDVVRRDILDRCAAKYRELFPEASPASVTRFLRSIWQGRVPPGTAPSPLHGPRRQRPWGTNLSDGKPLTELDAARGRLRLNSGPPRPGHLPETFRQLAHFLGTQAGIPPAVQEPLILDLMAFRARFCPRASMLATGQMPLAAMHVSSGRTLWQPTRYQPMAPVVISILAGDEARVLRYSPPGSYEEFLEFHGQRIARVLTEAYRQDGLLSFAVLQWIFLASTGTVSRTVDYYQRRHHVILPCPGTVLDMGRMLTHKDMVVRLHLQGLSVLEIARQTCHNPRSVDASLRPLTRFLFYTFTGFPPN
SIO_010081: TPH_RS00715
subclass of: SO_0000673
so part of: TPH_RS00715
location: 134716..135906
location: region:134716-135906:1
so has part: feature:134716-135906:1:exon

WP_015049306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134716-135906:1:exon

TPH_RS15810
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15810
old locus tag: Tph_c01390
so part of: sequence
location: complement(135876..136391)
location: region:135876-136391:-1
so has part: feature:135876-136391:-1:exon
subclass of: SO_0000010

position:135876:-1
position: 135876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136391:-1
position: 136391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135876-136391:-1:exon

TPH_RS15810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15810
old locus tag: Tph_c01390
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQECYEHLRQKESTFVLIANVRDKQNWDDRRILQEYKNQTSIESKFRFFKSPVYLGPCLPGKTNRVQALGYVFILVLLIASYLEYRVRKSLKKNNQYVLLPGKKKTDRPSTLSTAIWYISRQFYTSFTQVIAHGVNILEECSDKIQVFVDQGLTAAEDAGHQFGGKPVKV
SIO_010081: TPH_RS15810
subclass of: SO_0000673
so part of: TPH_RS15810
location: complement(135876..136391)
location: region:135876-136391:-1
so has part: feature:135876-136391:-1:exon

WP_015049307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135876-136391:-1:exon

TPH_RS15815
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15815
old locus tag: Tph_c01400
so part of: sequence
location: complement(136388..136693)
location: region:136388-136693:-1
so has part: feature:136388-136693:-1:exon
subclass of: SO_0000010

position:136388:-1
position: 136388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136693:-1
position: 136693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136388-136693:-1:exon

TPH_RS15815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15815
old locus tag: Tph_c01400
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVVHSSVLEVKKEKTLKKRIAKQKEELEKSAKELARQRFACIPDAERALKSLQEKAEAMGFATQDEIKLEENVPIPARAAPRRGNNRKSLLLTGVNAKLER
SIO_010081: TPH_RS15815
subclass of: SO_0000673
so part of: TPH_RS15815
location: complement(136388..136693)
location: region:136388-136693:-1
so has part: feature:136388-136693:-1:exon

WP_015049308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136388-136693:-1:exon

TPH_RS15820
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15820
old locus tag: Tph_c01410
so part of: sequence
location: complement(136890..137585)
location: region:136890-137585:-1
so has part: feature:136890-137585:-1:exon
subclass of: SO_0000010

position:136890:-1
position: 136890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137585:-1
position: 137585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136890-137585:-1:exon

TPH_RS15820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15820
old locus tag: Tph_c01410
inference: COORDINATES: protein motif:HMM:NF025469.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4277 domain-containing protein
translation: MSNNPYVMPDITAVSPGAVPVITMLCRTAKIGEIINQMVQWNENNSKITPGLPIESLIVCIICGRKPLWKVEEFWAKQDLKLLFDGTDITLDQLNDDAYGRALDKLSEVKMEELVSRCSLVMLAAHDLKISTVHFDTTSKSVQGVYENGAFGDFLITYGHSKDRRPDLKQFKIGAAVQEDGQPVMGQILSGNKSDKEWNPEAALKVLSSSIKRDSKMSSLSPTAPSYQQIP
SIO_010081: TPH_RS15820
subclass of: SO_0000673
so part of: TPH_RS15820
location: complement(136890..137585)
location: region:136890-137585:-1
so has part: feature:136890-137585:-1:exon

WP_015049309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136890-137585:-1:exon

TPH_RS00735
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00735
old locus tag: Tph_c01420
so part of: sequence
location: 137811..138389
location: region:137811-138389:1
so has part: feature:137811-138389:1:exon
subclass of: SO_0000010

position:137811:1
position: 137811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138389:1
position: 138389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137811-138389:1:exon

TPH_RS00735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00735
old locus tag: Tph_c01420
inference: COORDINATES: protein motif:HMM:NF019515.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1670 domain-containing protein
translation: MEDISTRFRQLTPVIITVWKPEELEQQPDTVPGFLEQLKRRIVRVCFEAYRQNGLLTLMELQWIFQLSSARISELIRSVQREHNLVVPTPGTILDAGRSMTHKDVIVSLHLQGYTVKDIARMTHHSPRAVDNYIGTFEAVLILYLFGVPPELMARLLKRWISLINEHLKLVREHYRDHQEIKEYLASKGVKI
SIO_010081: TPH_RS00735
subclass of: SO_0000673
so part of: TPH_RS00735
location: 137811..138389
location: region:137811-138389:1
so has part: feature:137811-138389:1:exon

WP_201764469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137811-138389:1:exon

TPH_RS00740
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00740
old locus tag: Tph_c01430
so part of: sequence
location: 138729..141326
location: region:138729-141326:1
so has part: feature:138729-141326:1:exon
subclass of: SO_0000010

position:138729:1
position: 138729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141326:1
position: 141326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138729-141326:1:exon

TPH_RS00740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00740
old locus tag: Tph_c01430
inference: COORDINATES: protein motif:HMM:NF012602.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin-dependent oxidoreductase
translation: MSDKERSSQSNVKKYYKSTGFCSFGIGSEAAEVEVKDGKILRIRPLRYDSKYDTGKIRKWKITARGKTFEPCKKTPLGPFSYVYENRVYSPNRILYPLKRVDWDPDGERNPQNRGKSKFVRISWDEAAELIAKEIKRVCEKYGPTAVLVQGDGHGETKAVHGPHGCHLALMNLLGGCTVQARQPDSWEGWYWGAKHAWGQDPVGQGRQANLIKDISEHTTMMLFWGCDPETTPLGWGGMSASRLCFWFRELGIKIISICPDLNYAAAVHADKWIPVLPNTDAALQLAIAYTWITEDIYDKEYVATHTYGFEEFKKYVLGEEDGVAKTPKWAEKLCGVPARIIKALARKWAKEAVTIAHCNGGSYIRSCYSTEPGRLEVLLLAMQGLGKPGTGQLKFFEWQLFGLHDQNPLPRSEVLPSVEGAYRGAVLEPPEKGQFIPKTLIPKAILSDEPISWYGVTLAGMPKEDQFNEYRYPEVGCSEVHMIWSDTPCWTVCWNGGNKWIEALRSPKIECVVVQHPWFENDCLFADIILPINTKFEEEDISVDILNGNYNLVLYEGQCVEPLGESKSDYEAVAEVAKKLGLYEQYTQSKTVKEWIKTGFEKSGISDRISYEEWLEKGYYIIPPAEDWENDEPGFSPFYKDPENKPLDTPTGKIEFYATGLAEHFPDDKERPPVPHWIPYGESHQESLQHPRSEKYPFLIVSNHPRWRVHAQLDDVPWLREIPTCKVKGPDGYLYEPLWINPVDAKALGVKTGDVVKIYNDRGWVLGGAYVTERIMPGVVYQDHGARLDLIVPGESDRSGSNNLICPTNTTSKNCAGEVTSGYLVGVEKVDVEALKKQYPEVFNRPYDARYGVDQAAWIIGGDE
SIO_010081: TPH_RS00740
subclass of: SO_0000673
so part of: TPH_RS00740
location: 138729..141326
location: region:138729-141326:1
so has part: feature:138729-141326:1:exon

WP_015049311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138729-141326:1:exon

TPH_RS00745
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00745
old locus tag: Tph_c01440
so part of: sequence
location: 141326..142138
location: region:141326-142138:1
so has part: feature:141326-142138:1:exon
subclass of: SO_0000010

position:142138:1
position: 142138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141326-142138:1:exon

TPH_RS00745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00745
old locus tag: Tph_c01440
inference: COORDINATES: protein motif:HMM:NF024644.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carboxypeptidase regulatory-like domain-containing protein
translation: MKVFVIDVAKCSGCYSCQLACKNEHVGKDWTPYAKPQPQTGHFWMKIKETEHGSIPKVKVEYRPTLCMHCDDASCIKAAKDGAVYRRKDGLVIIDPEKAKGQKQLVEACPYGAIYWNEELNIPQKCTGCAHLVDEGEVPRCVDACAHEAIKFGEEEELADLIAKAEVMQPELGLRPRVYYLNLPGFFVAGDVYDPVSDEIIEGAEITLNNKQTGESWTTKSDDFGDFWFKRLKSGQYSLDIKMSGYKPIQISDIAVDKSVNLGSLSLERE
SIO_010081: TPH_RS00745
subclass of: SO_0000673
so part of: TPH_RS00745
location: 141326..142138
location: region:141326-142138:1
so has part: feature:141326-142138:1:exon

WP_015049312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141326-142138:1:exon

TPH_RS00750
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00750
old locus tag: Tph_c01450
so part of: sequence
location: 142293..143474
location: region:142293-143474:1
so has part: feature:142293-143474:1:exon
subclass of: SO_0000010

position:142293:1
position: 142293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143474:1
position: 143474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142293-143474:1:exon

TPH_RS00750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00750
old locus tag: Tph_c01450
inference: COORDINATES: protein motif:HMM:NF019310.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MKRKAWAVMWVAYLAGVAIALNQFKVPPVMQVLLDSLQVSMATGGWLMSVFSVAGVMFALPAAFLLGRVGPKASGLVALGCTIVGSVIGALAQGAGVLLVGRIIEGIGLALIAVVAPAVISMWFEPQERGLPMGIWSSWVPVATFVMYNIADAIQKSFGWQGIWWLGTAVALVAFVAYAAVVDVPDKGAAGEEKQKGAPVSMGEGLLSLNTWLLALAFCGFNFALIGYSTWAPSYLSEFPGVGTAAANFYASLPSLVLIPGGIFAGWVLDRTRNRKAVLTIALAAVTVVLIWCFKLDTFIVVPYMIGIGLISSFVPSSTFTLAPETAPRPELAGVALGVVSIGQNFGMLVGPPVIAKAAAGGAWVMGTYPVVIGCAVAIVAALLMRIRAGASA
SIO_010081: TPH_RS00750
subclass of: SO_0000673
so part of: TPH_RS00750
location: 142293..143474
location: region:142293-143474:1
so has part: feature:142293-143474:1:exon

WP_015049313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142293-143474:1:exon

TPH_RS00755
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00755
old locus tag: Tph_c01460
so part of: sequence
location: complement(144059..145363)
location: region:144059-145363:-1
so has part: feature:144059-145363:-1:exon
subclass of: SO_0000010

position:144059:-1
position: 144059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145363:-1
position: 145363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144059-145363:-1:exon

TPH_RS00755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00755
old locus tag: Tph_c01460
inference: COORDINATES: protein motif:HMM:NF033559.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1634 family transposase
translation: MPLLVPEQSTFPLLLSWGTVRDAKAAEPPKKRQYKTPVERAIFAMAANRALDPMSKRGVEEWVKEDVVIPGVEEIPLQQLYRAMNFLLENEAELQKQVYYSVANLLNLEVDILYFDTTSTYFEIEDEDGDGGLRRRGHSKDHRPDLPQAVIGLAVTRDGIPVRCWVWPGNTADISVVEQVKKDLIGWKLGRVITVLDRGFNSEDNLRCLQRAGGHYIAGEKLRSGKENTVQALKRGGRYQTVRDNLEVKEIVVGNGEARERYILVRNPEEAARDKARREKIIKELEEQLPLIKTHAKAVCELMAHPVYGRYLKVDSRSLPKIDRAKIREEEKLDGKYLLRTSDDTLSAEDVALGYKQLLLVEDAFRTLKSRLELRPVYHRLEDRIRAHVLLCWLTVELRSDRNNKGSKGCNHISVGNRWVYCRQRELWGHFNPL
SIO_010081: TPH_RS00755
subclass of: SO_0000673
so part of: TPH_RS00755
location: complement(144059..145363)
location: region:144059-145363:-1
so has part: feature:144059-145363:-1:exon

WP_269077489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144059-145363:-1:exon

TPH_RS00760
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00760
so part of: sequence
location: 145333..145656
location: region:145333-145656:1
so has part: feature:145333-145656:1:exon
subclass of: SO_0000010

position:145333:1
position: 145333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145656:1
position: 145656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145333-145656:1:exon

TPH_RS00760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00760
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLIALVREGAADEESIRKPGSSGVTTEGQDSPLGAGCILCGLCVRICEKIGKSRLTFLGRGKNLRVGLVPGGSEEVGCGRCRACRRICPTGFIAPDARHAFTASLYR
SIO_010081: TPH_RS00760
subclass of: SO_0000673
so part of: TPH_RS00760
location: 145333..145656
location: region:145333-145656:1
so has part: feature:145333-145656:1:exon

WP_028991198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145333-145656:1:exon

TPH_RS00765
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00765
old locus tag: Tph_c01470
so part of: sequence
location: 145865..146269
location: region:145865-146269:1
so has part: feature:145865-146269:1:exon
subclass of: SO_0000010

position:145865:1
position: 145865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146269:1
position: 146269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145865-146269:1:exon

TPH_RS00765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00765
old locus tag: Tph_c01470
inference: COORDINATES: protein motif:HMM:NF013412.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyridoxamine 5'-phosphate oxidase family protein
translation: MPKITEEIKEVASKTRGWALATATKDGIPNVVAVAFGKLISESQILLVDVFMKKTRANIEANPNVAVAVWDMETLKGYQFKGTAHFETSGEIFDEGVQIVKSTMPQLTPKAALIVDVLQIYNLTPGAEAGKEMA
SIO_010081: TPH_RS00765
subclass of: SO_0000673
so part of: TPH_RS00765
location: 145865..146269
location: region:145865-146269:1
so has part: feature:145865-146269:1:exon

WP_015049315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145865-146269:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 1089553
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01055
inference: COORDINATES: profile:INFERNAL:1.1.1
note: molybdenum cofactor riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: molybdenum cofactor
so part of: sequence
location: 146742..146875
location: region:146742-146875:1
so has part: feature:146742-146875:1:region

position:146742:1
position: 146742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146875:1
position: 146875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146742-146875:1:region

TPH_RS00770
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00770
old locus tag: Tph_c01480
so part of: sequence
location: 147011..147628
location: region:147011-147628:1
so has part: feature:147011-147628:1:exon
subclass of: SO_0000010

position:147011:1
position: 147011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147628:1
position: 147628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147011-147628:1:exon

TPH_RS00770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00770
old locus tag: Tph_c01480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049343.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdenum cofactor guanylyltransferase
translation: MEASGIILAGGCSSRMGTDKSLMVYERQTLIERTVNELRKVVNEIVIASNNTSKYSIPGVVEVPDLYPGMGPLAGIHAGLKRVKHQYAFVIGCDMPLFKAELAKYLLEICPGYDVVVPQIDGYGEPLCAVYSKGCIEPIENCLKAGLRTVIMFYPQVRVLTVGRDEIERIGNPEELFYNLNTPEDYWSLMMRQNTDGSLEDNRKC
SIO_010081: TPH_RS00770
subclass of: SO_0000673
so part of: TPH_RS00770
location: 147011..147628
location: region:147011-147628:1
so has part: feature:147011-147628:1:exon

WP_015049316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147011-147628:1:exon

TPH_RS00775
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: mobB
locus tag: TPH_RS00775
old locus tag: Tph_c01490
so part of: sequence
location: 147654..148163
location: region:147654-148163:1
so has part: feature:147654-148163:1:exon
subclass of: SO_0000010

position:147654:1
position: 147654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148163:1
position: 148163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147654-148163:1:exon

TPH_RS00775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: mobB
locus tag: TPH_RS00775
old locus tag: Tph_c01490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049344.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin-guanine dinucleotide biosynthesis protein B
translation: MKKDKPVISIVGKSGAGKTTLLEKVIKRLKEDGIRVAAIKHDAHRFDMDKPGKDTWRMAQAGADVVVISSSEKMAMIEKVSKEKSLDEIVAMLPGVDIVLTEGYKSGDKPKIEVYRSEVHKERLCSPDELLAIVSDVVWDDLDVPQYQLDDIDGVVNEIRRYIAAYDSN
SIO_010081: TPH_RS00775
subclass of: SO_0000673
so part of: TPH_RS00775
location: 147654..148163
location: region:147654-148163:1
so has part: feature:147654-148163:1:exon

WP_015049317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147654-148163:1:exon

TPH_RS00780
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00780
old locus tag: Tph_c01500
so part of: sequence
location: 148195..149220
location: region:148195-149220:1
so has part: feature:148195-149220:1:exon
subclass of: SO_0000010

position:148195:1
position: 148195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149220:1
position: 149220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148195-149220:1:exon

TPH_RS00780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00780
old locus tag: Tph_c01500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011343553.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin-binding protein
translation: MKTVRVEESVGMVLCHDITKIVPGEFKGRAFKKGHIIRPEDVPMLLSLGKDRIYVWDTKNGDEVHEDEAGMRLAQAVRGEGVSLTEPAEGKVHLVAEHDGMCNIDEDLLFQINLIDDMVIATRNNNRPVKKGDVVAGVRVVPLMIENEKLRQAEEIARGKKVISVLPFRKYRVGMVITGNEVYYGRIKDRFSPVIKKKVEDYGSEVISQVIVPDDAERIAAAVREMISRGANLIMTSGGMSVDPDDVTPKGIKQTGAKIVSYGAPVLPGAMMLVAYLDEIPIMGLPGCVMYYKTTIFDLLLPLVMSGQKITRSMIARLGLGGLCLNCESCRYPQCSFGTGF
SIO_010081: TPH_RS00780
subclass of: SO_0000673
so part of: TPH_RS00780
location: 148195..149220
location: region:148195-149220:1
so has part: feature:148195-149220:1:exon

WP_015049318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148195-149220:1:exon

TPH_RS00785
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00785
old locus tag: Tph_c01510
so part of: sequence
location: 149233..150489
location: region:149233-150489:1
so has part: feature:149233-150489:1:exon
subclass of: SO_0000010

position:149233:1
position: 149233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150489:1
position: 150489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149233-150489:1:exon

TPH_RS00785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00785
old locus tag: Tph_c01510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049345.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin molybdotransferase MoeA
translation: MRLNVSLEEAQEIVLGMLRPIEREAILHLPDSLGRVLSRDIKAPFNVPAFDKSPLDGYAVRAEDTKMAASDNPVILHVIEEVPAGSVPTKRVEPGSAIRIMTGAPIPEGADVVVRFEDVEEAADTIKVSQPLASGANIIPAGDDVAEGEVVASTGTRLNAPLIGMLASLGISSVPVYQRVRVAIINTGNELLDPSEKWLPGKIYNSNRYLLEARCKELGAEPVYLDSVPDEETAVAESLQGALEVADLVITTGGASVGQYDVVKNAINAVGAEILFWKIALKPGMPTAVARKDGKVIFSLSGNPAAAMITFDLLAVPALKKLSGMKEVLPPTITGILVNAFQKRSPQRRMLRAKWKKQNGSDLIELTGKQSNDVLKSLVECNILIDVPAGTPSLAVGQHVSAYVVGNLTDSLVGELKC
SIO_010081: TPH_RS00785
subclass of: SO_0000673
so part of: TPH_RS00785
location: 149233..150489
location: region:149233-150489:1
so has part: feature:149233-150489:1:exon

WP_015049319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149233-150489:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 1089553
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01055
inference: COORDINATES: profile:INFERNAL:1.1.1
note: molybdenum cofactor riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: molybdenum cofactor
so part of: sequence
location: 150518..150651
location: region:150518-150651:1
so has part: feature:150518-150651:1:region

position:150518:1
position: 150518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150651:1
position: 150651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150518-150651:1:region

TPH_RS00790
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00790
old locus tag: Tph_c01520
so part of: sequence
location: 150639..151529
location: region:150639-151529:1
so has part: feature:150639-151529:1:exon
subclass of: SO_0000010

position:150639:1
position: 150639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151529:1
position: 151529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150639-151529:1:exon

TPH_RS00790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00790
old locus tag: Tph_c01520
inference: COORDINATES: protein motif:HMM:NF024869.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XdhC/CoxI family protein
translation: MLRHVSVATFHTGTCLFCWFQDYSNGYEGVIQRMEPEMMHLLAEKVEKNEEAALITVITSNRWHCRLGAMMLVDKNGVVLGGSIGGGQLEKKAIKEAQTCIERGVSRKVLLTEEGESVEIFINAFCYFDKLIIVGSGSVALNIYKVAMVLGYRITVVDNRTETLTEDRFPGADKLLLGDIVENLSSCDIDENTSIVIATHHHKFDEPALKAVIHSPARYIGILSNRRKAASYFDNLRAQGIPDNLLNRVYTPIGLDLGGRKTPEIAVAVMAEVLAVKYGRSGGFCRDIIKEGRIND
SIO_010081: TPH_RS00790
subclass of: SO_0000673
so part of: TPH_RS00790
location: 150639..151529
location: region:150639-151529:1
so has part: feature:150639-151529:1:exon

WP_236608805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150639-151529:1:exon

TPH_RS00795
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00795
old locus tag: Tph_c01530
so part of: sequence
location: 151522..152070
location: region:151522-152070:1
so has part: feature:151522-152070:1:exon
subclass of: SO_0000010

position:151522:1
position: 151522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152070:1
position: 152070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151522-152070:1:exon

TPH_RS00795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00795
old locus tag: Tph_c01530
inference: COORDINATES: protein motif:HMM:NF014693.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FmdE family protein
translation: MTDCFEQDLKVARDFHGGICTGIVFGVRIARAGLNYLGIKDPLKNKDFIVFVEADRCIADAVYAVTRCSLGRRRLKWVDYGKMAASFVDIESNKGVRIVVNTKRRAPEGADMVAFWGSIPDEELLKIEPIVVKLKKEDLPGKPLRRVMCEECGEFVMDGRDVLVDGRILCKACANGAYYERI
SIO_010081: TPH_RS00795
subclass of: SO_0000673
so part of: TPH_RS00795
location: 151522..152070
location: region:151522-152070:1
so has part: feature:151522-152070:1:exon

WP_015049321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151522-152070:1:exon

TPH_RS00800
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00800
old locus tag: Tph_c01540
so part of: sequence
location: 152088..152834
location: region:152088-152834:1
so has part: feature:152088-152834:1:exon
subclass of: SO_0000010

position:152088:1
position: 152088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152834:1
position: 152834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152088-152834:1:exon

TPH_RS00800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00800
old locus tag: Tph_c01540
inference: COORDINATES: protein motif:HMM:NF015949.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF364 domain-containing protein
translation: MWKIYDDLINAIPEDLTVKECLVGLHWTLVRSERGVGAAMTLKGGRAESELTGIVGMPLKKLASHVKSWNMVQASVGQAAINSAFNVYDNLAAITGLDARKLGSNDDNNAFRQFLPELKGKKVAVIGHFPHIDFLNDVCHLSILERKPQGSDYPDPACEYILPYQDFVFITGTAFTNKTMPRLLELSKNAKVVVVGPSVPITPILFKYGVDAIAGMIVRDEAVFWKCAQEGGKMNIFKQGGQMVCIRS
SIO_010081: TPH_RS00800
subclass of: SO_0000673
so part of: TPH_RS00800
location: 152088..152834
location: region:152088-152834:1
so has part: feature:152088-152834:1:exon

WP_015049322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152088-152834:1:exon

TPH_RS00805
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00805
old locus tag: Tph_c01550
so part of: sequence
location: 152819..153880
location: region:152819-153880:1
so has part: feature:152819-153880:1:exon
subclass of: SO_0000010

position:152819:1
position: 152819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153880:1
position: 153880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152819-153880:1:exon

TPH_RS00805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00805
old locus tag: Tph_c01550
inference: COORDINATES: protein motif:HMM:NF013219.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron ABC transporter permease
translation: MHTQLVHRSAVCPRRLKASAKLILALLLVTVFVFSIVVGRYPITIPELLSTVYSYFFGSSMGHSENLETVIFNVRLPRVITAMVVGAALSIAGASYQGMFKNPLVSPDILGASAGAGFGAALAILFSLSVFMIQLSAFVWGALAVMLVYLINTKLINTKLNYEPTLGLVLSGILISSLFSSGTAAIKYIADANDKLPEITFWLMGSLSAVDKRDLLNIIFPMVAGFLLLFLVRWRINILAFGEEEARALGINTQRLRMIIILGSTLITAASVSVSGMIGWVGLVIPHLARAVAGPNYETLIPVTFIIGASYLLLVDDLARCLGAVEVPLGILTSLLGVPVFLIVLRKNIAGWR
SIO_010081: TPH_RS00805
subclass of: SO_0000673
so part of: TPH_RS00805
location: 152819..153880
location: region:152819-153880:1
so has part: feature:152819-153880:1:exon

WP_015049323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152819-153880:1:exon

TPH_RS00810
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00810
old locus tag: Tph_c01560
so part of: sequence
location: 153880..154674
location: region:153880-154674:1
so has part: feature:153880-154674:1:exon
subclass of: SO_0000010

position:154674:1
position: 154674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153880-154674:1:exon

TPH_RS00810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00810
old locus tag: Tph_c01560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049288.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MLEVRNINYRYGRNEVLHNVSFKVEQGEFVCVLGPNGSGKTTLLKNILGLLTPDTGTVLIEGEDVRKMPPSKLAKIIGYIPQAHTPPFPFRVFDVVLMGRAPYLTSLSVPSDEDERIAYESLEELNITRLKDKPYTEISGGERQLVLIARALAQKPKILVMDEPAASLDFGNQSLFLEYMRTICDKGMSILMVTHDPHHALFCADKVVMLKNGRIVKMGPPQTTIEGDTMREIYRTDVRVARIKLSEKRTITVCVPVPSLLKTC
SIO_010081: TPH_RS00810
subclass of: SO_0000673
so part of: TPH_RS00810
location: 153880..154674
location: region:153880-154674:1
so has part: feature:153880-154674:1:exon

WP_015049324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153880-154674:1:exon

TPH_RS00815
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00815
old locus tag: Tph_c01570
so part of: sequence
location: 154705..155832
location: region:154705-155832:1
so has part: feature:154705-155832:1:exon
subclass of: SO_0000010

position:154705:1
position: 154705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155832:1
position: 155832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154705-155832:1:exon

TPH_RS00815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00815
old locus tag: Tph_c01570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011392932.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MIRLNRIKNFMVTALVFVLLCSLVTGCGSREISEKNTGSVETSQQRSGERVITDHAGRTVKIPAEVDKVYFTSPIAQIMVYTLAPEKMAGWTMQLTDKMKKYIPPQYQELPYLGGQQMSAKLNIEEILRVKPDVIFSVGPDPISDTTKSEADKLQQQLNIPVVVVDGDINSTEKAYAFLGQILGVEDRAKKLIDYCNRTMKDVVEKTKSIPKEKRVRVYYAEGPEGLATEPKGSSHAILLDIVNAENVAEVQQKGGSGMSNVSLEQVLKWNPDVILTWSTDRGGACNKILTSPDWKNIKAVKNGKVYEIPNYPFNWFDRPPSVNRFLGLKWLAAILYPDVYQVNLVKEVKEFYKLFYHVDLTDDDVKELLKDAGF
SIO_010081: TPH_RS00815
subclass of: SO_0000673
so part of: TPH_RS00815
location: 154705..155832
location: region:154705-155832:1
so has part: feature:154705-155832:1:exon

WP_015049325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154705-155832:1:exon

TPH_RS00820
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: moaA
locus tag: TPH_RS00820
old locus tag: Tph_c01580
so part of: sequence
location: 156194..157174
location: region:156194-157174:1
so has part: feature:156194-157174:1:exon
subclass of: SO_0000010

position:156194:1
position: 156194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157174:1
position: 157174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156194-157174:1:exon

TPH_RS00820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: moaA
locus tag: TPH_RS00820
old locus tag: Tph_c01580
EC number: 4.1.99.22
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011393625.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTP 3',8-cyclase MoaA
translation: MEDLYGRRIDYLRVSVTDRCNLRCIYCMPPEGVKPKEHNDIIRFEEILVAAEVALELGINRFRLTGGEPLVRKGIIPFIGALSMLPGIEDVSLTTNGILLSQMAGQLKEAGIRRINISLDTMNQKTYRELTRGGDLRAVWEGIEKALEIGFDPVKINIVALRGINDEEWVDFARLTMDKPLHIRFIELMPIGAGWQMARENYASCRQVRGVIERELGELTPVIDVEGNGPAEYQRLPGAVGTIGFIHAVSEHFCGSCNRLRLTADGKLRPCLFDRREIDLKGAIRRGAGGEELQRLFRKAVQLKAANYQMAARAGKGGRSMVQIGG
SIO_010081: TPH_RS00820
subclass of: SO_0000673
so part of: TPH_RS00820
location: 156194..157174
location: region:156194-157174:1
so has part: feature:156194-157174:1:exon

WP_015049326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156194-157174:1:exon

TPH_RS00825
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00825
old locus tag: Tph_c01590
so part of: sequence
location: 157209..157940
location: region:157209-157940:1
so has part: feature:157209-157940:1:exon
subclass of: SO_0000010

position:157209:1
position: 157209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157940:1
position: 157940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157209-157940:1:exon

TPH_RS00825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00825
old locus tag: Tph_c01590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011392949.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF364 domain-containing protein
translation: MSFLNEIKQRFVEHLRNEGVSLNEVAEVISSRPLTPEEAIGRPERDDFPLLKGKEFMIEARFRGCSGQAFTDMPRSFTATLGEILSLSTDRNDHRAILIASLNAVMRYLNRIEKTIHCRDEEPRLCAERLVEYVWTRFGNPRIAFIGLQPAMVSALAKHFRLRVTDLDPENVGQVKGGVKIEDVSATREVLEWSDVVLATGTTAVNDTLSSIVGSEKPVVFYGVTISSIAYLAGLERFCPFGH
SIO_010081: TPH_RS00825
subclass of: SO_0000673
so part of: TPH_RS00825
location: 157209..157940
location: region:157209-157940:1
so has part: feature:157209-157940:1:exon

WP_015049327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157209-157940:1:exon

TPH_RS00830
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: modA
locus tag: TPH_RS00830
old locus tag: Tph_c01600
so part of: sequence
location: 157974..158783
location: region:157974-158783:1
so has part: feature:157974-158783:1:exon
subclass of: SO_0000010

position:157974:1
position: 157974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158783:1
position: 158783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157974-158783:1:exon

TPH_RS00830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: modA
locus tag: TPH_RS00830
old locus tag: Tph_c01600
inference: COORDINATES: protein motif:HMM:NF024921.2
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0030973 - molybdate ion binding [Evidence IEA]
GO process: GO:0015689 - molybdate ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdate ABC transporter substrate-binding protein
translation: MRTANLIRKTGFLFTVILVGVLFVSGCSGKTAAEMKPREPKSLLVYCSAGLKDPVEEICQAFKSHYEGLDINYSIAGSAQLNSQILLTQKGDVYAVSDEEELKPLQDKGLVAWERSLVYHTPVLAVPKGNPGGINKLSDLTRQGVRVALGDAGAVPIGKIADKMLEENGILEAVNKNVVVRTATVNELLVYLSSRQVDAAIVWEENCRSAKGTVEVIKIPELEEYVKITKAVVLSCSQENELARELAEFMGSPQAMEIWEKYGYRPVAS
SIO_010081: TPH_RS00830
subclass of: SO_0000673
so part of: TPH_RS00830
location: 157974..158783
location: region:157974-158783:1
so has part: feature:157974-158783:1:exon

WP_015049328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157974-158783:1:exon

TPH_RS00835
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00835
old locus tag: Tph_c01610
so part of: sequence
location: 158795..159592
location: region:158795-159592:1
so has part: feature:158795-159592:1:exon
subclass of: SO_0000010

position:158795:1
position: 158795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159592:1
position: 159592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158795-159592:1:exon

TPH_RS00835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00835
old locus tag: Tph_c01610
inference: COORDINATES: protein motif:HMM:TIGR01581.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO function: GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MRDQLTKFFNFVITGALLCLIVVSVGAVLIRGLPQLIDHTRNSELLFALKLSLLTSVVSTFMCLLVAIPVAYTLTRYRFPGQGVIASIIRIPLTMPPIVSGVCLLLFLGTTVFGEALSRIGINFIFTVPGIIMAQFFVNVPSLITVLKAAIENIDVRLDYVARTLGCSALEAFLRVDLPLMRKNIVAGLVLTWGKALGEFGAVLMVAGATKFRTETLPTSIYLNMATGDMSAVMASTSILILIGIAALVAFELLAIENWERTRVL
SIO_010081: TPH_RS00835
subclass of: SO_0000673
so part of: TPH_RS00835
location: 158795..159592
location: region:158795-159592:1
so has part: feature:158795-159592:1:exon

WP_015049329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158795-159592:1:exon

TPH_RS00840
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00840
old locus tag: Tph_c01620
so part of: sequence
location: 159597..160664
location: region:159597-160664:1
so has part: feature:159597-160664:1:exon
subclass of: SO_0000010

position:159597:1
position: 159597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160664:1
position: 160664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159597-160664:1:exon

TPH_RS00840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00840
old locus tag: Tph_c01620
inference: COORDINATES: protein motif:HMM:NF012235.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MMRMNAGYLRLCGISRKIGNFELRNISLGVERGEYFVILGPSGAGKTLLLETIAGLQRVDEGETWIGEINITHWPPEKRQFGFVYQDCALFPHLNVKDNIAFGLKVRRLYSRIVQKELDDIVDLLGISHLLERYPATLSGGEKQRVALARALVMKPRVLLLDEPLSALDVPMREALRDELKRLHRLTGMLMIHVTHDFTEAMLLADRAAVIVDGALAQVGYPDEIFNRPQSRAVAEFVGTQNVFQSKVINQNGKKFVQFGKSQLAVETDLEGTVNFSFRPEDVVLSSSRHPVNCLRGVVDFIARQGLFTRVVVEVEGVGVVALLASNNGSMYALNPGTPVFCVIPPEVINVFPDK
SIO_010081: TPH_RS00840
subclass of: SO_0000673
so part of: TPH_RS00840
location: 159597..160664
location: region:159597-160664:1
so has part: feature:159597-160664:1:exon

WP_049886052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159597-160664:1:exon

TPH_RS00850
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: moaC
locus tag: TPH_RS00850
old locus tag: Tph_c01630
so part of: sequence
location: 161090..161587
location: region:161090-161587:1
so has part: feature:161090-161587:1:exon
subclass of: SO_0000010

position:161090:1
position: 161090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161587:1
position: 161587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161090-161587:1:exon

TPH_RS00850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: moaC
locus tag: TPH_RS00850
old locus tag: Tph_c01630
EC number: 4.6.1.17
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011393624.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cyclic pyranopterin monophosphate synthase MoaC
translation: MADLTHFNREGRARMVEVGEKPTTTREAVARGTVFMQPETLELIKSGGIAKGDVLGVAQIAGIMGAKRTSILIPMCHPLFLSGIDLNFRADPERSAVEIEARVRCQGKTGVEMEALTAVSIAALTIYDMCKAVDRGMAIGEIRLIEKTGGKSGTYRREGEKEWEE
SIO_010081: TPH_RS00850
subclass of: SO_0000673
so part of: TPH_RS00850
location: 161090..161587
location: region:161090-161587:1
so has part: feature:161090-161587:1:exon

WP_015049331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161090-161587:1:exon

TPH_RS00855
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00855
old locus tag: Tph_c01640
so part of: sequence
location: 161575..162036
location: region:161575-162036:1
so has part: feature:161575-162036:1:exon
subclass of: SO_0000010

position:161575:1
position: 161575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162036:1
position: 162036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161575-162036:1:exon

TPH_RS00855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00855
old locus tag: Tph_c01640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011393623.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MOSC domain-containing protein
translation: MGRIVAVCTSRNTGERKKNIGRGTLIAGHGLEGDAHAGPWHRQVSLLAIESIRKMQNKGLDVGPGDFAENITTEGIEIAALPLGTKLRLGKEAIGEVTQIGKECHSRCAIYHQAGDCVMPREGVFIRVLQGGPIEVGDEIEIIETPQKEVTEK
SIO_010081: TPH_RS00855
subclass of: SO_0000673
so part of: TPH_RS00855
location: 161575..162036
location: region:161575-162036:1
so has part: feature:161575-162036:1:exon

WP_015049332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161575-162036:1:exon

TPH_RS00860
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00860
old locus tag: Tph_c01650
so part of: sequence
location: 162033..162545
location: region:162033-162545:1
so has part: feature:162033-162545:1:exon
subclass of: SO_0000010

position:162033:1
position: 162033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162545:1
position: 162545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162033-162545:1:exon

TPH_RS00860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00860
old locus tag: Tph_c01650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049947.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MogA/MoaB family molybdenum cofactor biosynthesis protein
translation: MKVAILTASDKGYRGEREDRSAQVIKEMLVSLGAEVIAYDIVPDEKEQLIAKLLEYTDQKRADLILTTGGTGLAPRDVTPEATLAVIEREIPGIAEAMRAEGLKHTPHAMLSRAVAGSRGRTLIINLPGSPRAVRENLRVIIPVLPHALETIQGRGNECARMRHEEEVEG
SIO_010081: TPH_RS00860
subclass of: SO_0000673
so part of: TPH_RS00860
location: 162033..162545
location: region:162033-162545:1
so has part: feature:162033-162545:1:exon

WP_015049333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162033-162545:1:exon

TPH_RS00865
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00865
old locus tag: Tph_c01660
so part of: sequence
location: 162608..163222
location: region:162608-163222:1
so has part: feature:162608-163222:1:exon
subclass of: SO_0000010

position:162608:1
position: 162608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163222:1
position: 163222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162608-163222:1:exon

TPH_RS00865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00865
old locus tag: Tph_c01660
inference: COORDINATES: protein motif:HMM:NF025217.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MKKIDVLKYDQIAREVFAPVYPLIAEQIVQNTGIKEGICLDIGSGGGYLAIALAKITDLDFYLLDCSQEFLAIASKNIADHGLNGRAKTLHGDVHQIPLDDCSINLVVSRGSYRFWNDQRKAFEEIYRVLAPGGMGYVGGGLGSSEIKERIFKEMRVKYSEWCDLMEGRRKNNVQTLNENLRKAGILTYEINRDDTGLWIKIIK
SIO_010081: TPH_RS00865
subclass of: SO_0000673
so part of: TPH_RS00865
location: 162608..163222
location: region:162608-163222:1
so has part: feature:162608-163222:1:exon

WP_015049334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162608-163222:1:exon

TPH_RS00870
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00870
old locus tag: Tph_c01670
so part of: sequence
location: 163271..163918
location: region:163271-163918:1
so has part: feature:163271-163918:1:exon
subclass of: SO_0000010

position:163271:1
position: 163271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163918:1
position: 163918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163271-163918:1:exon

TPH_RS00870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00870
old locus tag: Tph_c01670
inference: COORDINATES: protein motif:HMM:NF014671.2
GO function: GO:0016783 - sulfurtransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: formate dehydrogenase accessory sulfurtransferase FdhD
translation: MSFDLTQRVSILHVKSGVRALVEDTLVSEHYLTLFINGRKRVTFSCLPEYLEEMILGYLLSEGVVEKTSDVEKLNFSEDGHKVDVSIKNGVQLPIESNFDCGRQLANFDAVVQEAGLKSLEGAPSFSVSKILSYYERFIEQSHLYKKTRAVHNSALCNEGGILFAAKDISRHNAIDKVIGMAHKKGIALSGTCILTSGRVPLDIAQFPELRQSRD
SIO_010081: TPH_RS00870
subclass of: SO_0000673
so part of: TPH_RS00870
location: 163271..163918
location: region:163271-163918:1
so has part: feature:163271-163918:1:exon

WP_015049335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163271-163918:1:exon

TPH_RS00875
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00875
old locus tag: Tph_c01680
so part of: sequence
location: complement(164152..165147)
location: region:164152-165147:-1
so has part: feature:164152-165147:-1:exon
subclass of: SO_0000010

position:164152:-1
position: 164152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165147:-1
position: 165147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164152-165147:-1:exon

TPH_RS00875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00875
old locus tag: Tph_c01680
inference: COORDINATES: protein motif:HMM:NF013752.2
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS4 family transposase
translation: MLSEKLKGFKDLVIADGTIVRLHEKLAKQFPGARGKAELKIHTVLGITGNTKSIRIYPGKTADIKTIRIGSWVKDNILLFDLGFFKYQLFSRIKRNGGYFVSRFKNTANPTIVSVLRTYRGQAIDLAGKKLKEVLPRLRRDVLDVLVEVSFNRRSYKGKSSKAVETYRLVGVFNQETREYHLYLTNISPDQLAAEDVALLYRARWSIELVFKELKRLYKLDVISSGEDDVVEALVLVAMLTLVVSHRLLNHMRLLVPEKSERFTHLRWAETFYSAAPFLLNRVLDVAEVEDDPFLAICFFMCEGVDPNVSRKRLLSPWVKAANSQEFNGTE
SIO_010081: TPH_RS00875
subclass of: SO_0000673
so part of: TPH_RS00875
location: complement(164152..165147)
location: region:164152-165147:-1
so has part: feature:164152-165147:-1:exon

WP_049886053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164152-165147:-1:exon

TPH_RS15295
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15295
old locus tag: Tph_c01690
so part of: sequence
location: complement(165129..165482)
location: region:165129-165482:-1
so has part: feature:165129-165482:-1:exon
subclass of: SO_0000010

position:165129:-1
position: 165129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165482:-1
position: 165482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165129-165482:-1:exon

TPH_RS15295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15295
old locus tag: Tph_c01690
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIPLPGKIEPHEIEKVMNKMFPPEWLRATAAKVGCVKRNRKIDPVILFWVLVLGFGVGAQRTLASLRRAYEAASAETLVPSSFYERFNRRLVAFLKECLANQERNLPVTPASCSRKN
SIO_010081: TPH_RS15295
subclass of: SO_0000673
so part of: TPH_RS15295
location: complement(165129..165482)
location: region:165129-165482:-1
so has part: feature:165129-165482:-1:exon

WP_015049337.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165129-165482:-1:exon

TPH_RS00885
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00885
old locus tag: Tph_c01700
so part of: sequence
location: complement(165663..167618)
location: region:165663-167618:-1
so has part: feature:165663-167618:-1:exon
subclass of: SO_0000010

position:165663:-1
position: 165663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167618:-1
position: 167618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165663-167618:-1:exon

TPH_RS00885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00885
old locus tag: Tph_c01700
inference: COORDINATES: protein motif:HMM:NF025885.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma 54-interacting transcriptional regulator
translation: MAKRRFFEEDEDPRKNPDICPEVAESWIRSKNYGVNPFDIKSQKAPDENVIKKAFHDNKLLIQTAVPFIKKFMPFLTISDYILGLTDRYGTVLYNAGNENAFKYINQRKRSIKFLSAGEEFIGTNANILSIIHKIPVQLIGPNNYLVIHEHHIASAAPILNSNGEVIGSLSVMQDYGDLNNSQKIYAHTLGWVTSMAEAITKQYEIQRKTLQLETAYKTLEKSLSVAEQGFVTLDGNGMITHISKKAMEMLGITDTHAINQHYTKYFGVDASIRDALLNGYNVHDLELSVGYDSHDKKYLISIDHIWDDKKVSRQGAVIYMTKVSRMDKIIAKRGGTKAYFAFDDIIGESEEIRRAISFAKQVALTNTNILLIGESGTGKELFAQAIHNSYCPDGPFVAVNCASMPRNLIESELFGYEGGAFTGADRKGRPGKFELANGGTLFLDEIGDMPIELQPVLLRVLEERQVMRIGGTKYIPVNVRIIAATNKDLLELIRKRQFREDLYYRLAVLKIEIPPLRQRGNDALILAKYFVETTCQKIGKKPPEIGADARKVISTYHWPGNIRQLENAIVHAVYMCNGKTITANDLPLEIICEEKSPENRRELLSIAELEKDAIIKAMRLTKKNTAKAAEILGIGRTTLYKKLKDYKIEL
SIO_010081: TPH_RS00885
subclass of: SO_0000673
so part of: TPH_RS00885
location: complement(165663..167618)
location: region:165663-167618:-1
so has part: feature:165663-167618:-1:exon

WP_015049338.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165663-167618:-1:exon

TPH_RS00890
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00890
old locus tag: Tph_c01710
so part of: sequence
location: 167621..169198
location: region:167621-169198:1
so has part: feature:167621-169198:1:exon
subclass of: SO_0000010

position:167621:1
position: 167621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169198:1
position: 169198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167621-169198:1:exon

TPH_RS00890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00890
old locus tag: Tph_c01710
inference: COORDINATES: protein motif:HMM:NF012602.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin-dependent oxidoreductase
translation: MKRGTKLIVVDPRANWLATRAEHHLQLRPGTDGALALALLYAVIKTDKYDKQFVEKWCYGFDKLAERVAQYPPEWAEEITGVPAEDIYAAAECLVQKPSSACTGVAIDQNPNCIQIAHALYSIFAITGNLDIPGGLFMGQPQFFAGAAVDSNEDEEEFEGIGYREFPAIPMIVNTTHPDCTLEALETGKPYPIKFAFIQSTNFLASSIVVQPKRWYEAMRKLEFIVASDIFMNPTIMALADLVLPVSTSLEHDGIVMNSMASQPGQFGALVKIIDDFGETKSDLEIVLDLYHRLYPDSNDPRWKDPESYLTHDMVQIPGIGVTFPELKERVIGQYELEYRKYEKGLLRADGKPGFNTPTGKIELYSTILASLNEDPLPYYIEPKFSAVSRPDIAKEYPLIMTTGARRFTYFHSEHRQISKLREIHPWPTAEINPKTAAEKGITEGSWIYIENPWGKAKVVAHVTPIVKENVVSVDHGWWYPERDPEKLFDVWEPSINSLIPHKEIGKLGFGTHYKCMPCKIYRAE
SIO_010081: TPH_RS00890
subclass of: SO_0000673
so part of: TPH_RS00890
location: 167621..169198
location: region:167621-169198:1
so has part: feature:167621-169198:1:exon

WP_015049339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167621-169198:1:exon

TPH_RS00895
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00895
old locus tag: Tph_c01720
so part of: sequence
location: 169223..169561
location: region:169223-169561:1
so has part: feature:169223-169561:1:exon
subclass of: SO_0000010

position:169223:1
position: 169223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169561:1
position: 169561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169223-169561:1:exon

TPH_RS00895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00895
old locus tag: Tph_c01720
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: oxidoreductase
translation: MAQYGLLIDNEYCTGCRSCEVACKNENDLPLGQWGIKVLELGPWKLMDGKHWEFRYIPVPTSYCNLCQHRVAKGEQPSCVLHCLASAIEYGPVEELAAKLEAKGKKASIFIP
SIO_010081: TPH_RS00895
subclass of: SO_0000673
so part of: TPH_RS00895
location: 169223..169561
location: region:169223-169561:1
so has part: feature:169223-169561:1:exon

WP_015049340.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:169223-169561:1:exon

TPH_RS00900
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00900
old locus tag: Tph_c01730
so part of: sequence
location: 170137..171795
location: region:170137-171795:1
so has part: feature:170137-171795:1:exon
subclass of: SO_0000010

position:170137:1
position: 170137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171795:1
position: 171795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170137-171795:1:exon

TPH_RS00900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00900
old locus tag: Tph_c01730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049442.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MFRENKSHLQTELFNTTTLMHPRTIAQLKKSWAPIYYEHVFCRIDEKKFAHLYCENNGSPNKPVNILLSLEFIKHLYDYTDEQLLEQYYFNYQIAYALGQRNLGELYICERTLYDFRRRLYEYTIQHPEEEDLIFQQFQGLLEHFLAITKIKTNEQRMDSTAIMPNIKRAGRLSLAFDVLKKGVAACPQELLPEKLQKVLEPAFKTEVLYRSRSQDVQARLEKIVELQEELLALTSNLPEIQAKPEIKLVQRFIDEQTTYDPEQKKRIVKENKDIRPDSLQSAYDQDATFRKKGNKEQVGYVCNLTETCSEENDVQFITDYVLEKNTKADVEMAAERLPKIKERTGVTDLYTDGGYYGEDLHRKAEAELNVKMHYTNLTGRQPEAGKIPLTAFKIENRQKVLACPQQQTPTHTFYDEAKRKITAWFDPQICRECPLHEQCPVKIQKKKALLQFNQSALLAAETRQEMADSQCRRENTSKRAAIEGTVSAIKRGHGAQKLTVRGQIKSALVMGFKCIAHNFQQLKNWFHIKRKEAREISVKPKISLPGVGVPI
SIO_010081: TPH_RS00900
subclass of: SO_0000673
so part of: TPH_RS00900
location: 170137..171795
location: region:170137-171795:1
so has part: feature:170137-171795:1:exon

WP_015049341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170137-171795:1:exon

TPH_RS00905
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: fdhD
locus tag: TPH_RS00905
old locus tag: Tph_c01740
so part of: sequence
location: 172050..172838
location: region:172050-172838:1
so has part: feature:172050-172838:1:exon
subclass of: SO_0000010

position:172050:1
position: 172050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172838:1
position: 172838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172050-172838:1:exon

TPH_RS00905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: fdhD
locus tag: TPH_RS00905
old locus tag: Tph_c01740
inference: COORDINATES: protein motif:HMM:TIGR00129.1
GO component: GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO function: GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO process: GO:0009061 - anaerobic respiration [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: formate dehydrogenase accessory sulfurtransferase FdhD
translation: MFDLTKKVSIVYISDGFKTVIEDTVVCEHYLTLLIDGKKRATFSCTPEYLEEMILGYLLTEGIVEKIEDVEKVAFSQDGHEVDVSIRKGMQLPITGESNLDNRRQHPNYRRTAFQQPGLKRTDCSISFSISEILRNFERFIEKAQMYKKTRAVHSSALCNEDGIIFVINDIGRHNAIDKVIGMAQKKRIALSGTYIVTSGRVPTEIARKVIKGGIPMLVARSVATYEAIELARRYDLILVGGLGYGQIKVYNGGQHLVDEKL
SIO_010081: TPH_RS00905
subclass of: SO_0000673
so part of: TPH_RS00905
location: 172050..172838
location: region:172050-172838:1
so has part: feature:172050-172838:1:exon

WP_015049342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172050-172838:1:exon

TPH_RS00910
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00910
old locus tag: Tph_c01750
so part of: sequence
location: 172986..173618
location: region:172986-173618:1
so has part: feature:172986-173618:1:exon
subclass of: SO_0000010

position:172986:1
position: 172986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173618:1
position: 173618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172986-173618:1:exon

TPH_RS00910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00910
old locus tag: Tph_c01750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049316.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdenum cofactor guanylyltransferase
translation: MKASGIILAGGSSSRMGRDKSLMVYNQQTLIERTVNELRKVVDEIVIASNNTSKYSIPGVIEVPDLYPGMGPLAGIHAGLKQIKHRYAFVISCDMPLFRAELAKYLLELSPGYDVVVPQINDYLEPLCAVYSKECLEPIESCLKAGVRKIILFFPQVRVLTIGRREIENIGNPEELFYNLNTPEDYRLLLERRQSRQKGQEEHCDEGVSN
SIO_010081: TPH_RS00910
subclass of: SO_0000673
so part of: TPH_RS00910
location: 172986..173618
location: region:172986-173618:1
so has part: feature:172986-173618:1:exon

WP_015049343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172986-173618:1:exon

TPH_RS00915
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: mobB
locus tag: TPH_RS00915
old locus tag: Tph_c01760
so part of: sequence
location: 173615..174124
location: region:173615-174124:1
so has part: feature:173615-174124:1:exon
subclass of: SO_0000010

position:173615:1
position: 173615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174124:1
position: 174124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173615-174124:1:exon

TPH_RS00915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: mobB
locus tag: TPH_RS00915
old locus tag: Tph_c01760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049317.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin-guanine dinucleotide biosynthesis protein B
translation: MKNCKPVISIVGKSGAGKTTLLEKVIKRLKEDGIRVAAIKHDAHRFDMDKPGKDTWRMAQTGADVVVISSSEKMAMIEKVPREKSLDEIIEMLPDVDIVLTEGYKSGDKPKIEVFRSEVHKERLCSPEELIAIVSDVEWDDLEVPRYHLDDIDGVAGEIKKYIEAYANS
SIO_010081: TPH_RS00915
subclass of: SO_0000673
so part of: TPH_RS00915
location: 173615..174124
location: region:173615-174124:1
so has part: feature:173615-174124:1:exon

WP_015049344.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173615-174124:1:exon

TPH_RS00920
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00920
old locus tag: Tph_c01770
so part of: sequence
location: 174239..175483
location: region:174239-175483:1
so has part: feature:174239-175483:1:exon
subclass of: SO_0000010

position:174239:1
position: 174239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175483:1
position: 175483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174239-175483:1:exon

TPH_RS00920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00920
old locus tag: Tph_c01770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049319.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin molybdotransferase MoeA
translation: MKINVSLEEAQELVLSMVNPVGETVVSLPAALGRVISRDLIAPFSEPSFDKSAFDGYAVRAGDTRSASSASPVVLQVIEEVSAGSVPVKKVVPGCAIRIMTGAPLPEGADAVVPFEDVEEALGSIVIRRPLAAGSGVIPTGNDVLEGEVIARRGRRVNALLIGVLASLGITRVPVYDQVRVAIINTGSELLDPSEKRQLGKIYVSNRYLLEARCREVGAEPVYLEGVPDEKGAIAGSLKKALEKADLVITTGGTSAGRYDVIKEALSIIGAQILFSRVAIKPGKSVIASHKDEKIILSLAGNPTAAMVTFDLVAVPAIKRMSGLEDPLLPVVTGILAGGFPSTSPRRRLLMARWKRQNGLGLIELAGKQGNVLKSSIDCNLLVDVPAGSPPLAAGQSVAAFVVGNLNDSLSEDE
SIO_010081: TPH_RS00920
subclass of: SO_0000673
so part of: TPH_RS00920
location: 174239..175483
location: region:174239-175483:1
so has part: feature:174239-175483:1:exon

WP_015049345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174239-175483:1:exon

TPH_RS00925
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00925
old locus tag: Tph_c01780
so part of: sequence
location: complement(175563..175814)
location: region:175563-175814:-1
so has part: feature:175563-175814:-1:exon
subclass of: SO_0000010

position:175563:-1
position: 175563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175814:-1
position: 175814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175563-175814:-1:exon

TPH_RS00925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00925
old locus tag: Tph_c01780
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDVELNGQKGFQIQWFRVDCDSCGWSWFESMEYKTARFFYCPKCLRKIQNPNNKRKKERIANEEDIASLKRYFDRISLDHRS
SIO_010081: TPH_RS00925
subclass of: SO_0000673
so part of: TPH_RS00925
location: complement(175563..175814)
location: region:175563-175814:-1
so has part: feature:175563-175814:-1:exon

WP_015049346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175563-175814:-1:exon

TPH_RS00930
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00930
old locus tag: Tph_c01790
so part of: sequence
location: 176134..176892
location: region:176134-176892:1
so has part: feature:176134-176892:1:exon
subclass of: SO_0000010

position:176134:1
position: 176134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176892:1
position: 176892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176134-176892:1:exon

TPH_RS00930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00930
old locus tag: Tph_c01790
inference: COORDINATES: protein motif:HMM:NF019322.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MVQEDMIIDKHSVIPIYYQLFKYFEKRIRSGDFKPGDALPTEMEIAERFGISRMTVRRAIAELANLGMVYTQKGKGTFVARPKLDNVVFNLDNFYDEVRQKGLECRTKLLEARIIKADPLTAKRLQIDVNTRCLFFRFVITADEEPLAYETKYTIYAKQKPILESELKDSSLSRLAAVHSDSTPVSSKKVLMASQTTEEESEILGVACNTPVILVVQTVYDQNKKPIAWGKTLYRGDRYKLTIYDGWLSGDE
SIO_010081: TPH_RS00930
subclass of: SO_0000673
so part of: TPH_RS00930
location: 176134..176892
location: region:176134-176892:1
so has part: feature:176134-176892:1:exon

WP_015049347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176134-176892:1:exon

TPH_RS00935
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00935
old locus tag: Tph_c01800
so part of: sequence
location: 176915..177592
location: region:176915-177592:1
so has part: feature:176915-177592:1:exon
subclass of: SO_0000010

position:176915:1
position: 176915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177592:1
position: 177592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176915-177592:1:exon

TPH_RS00935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00935
old locus tag: Tph_c01800
inference: COORDINATES: protein motif:HMM:NF014375.2
GO function: GO:0046872 - metal ion binding [Evidence IEA]
note: Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cobalamin-dependent protein
translation: MHNLAIDKDELVMAMANLEEERVLDLVRREIEAGKSAFSIVEQCRRGVEVVGKRYSEGSYYLSDLIMSEAILKEVMEMIEPYFPQNTMETNGIKVVMGTIEGDIHDLGKNIVIYLLKSIGFQVYDLGVDVKPEKFIHALKETGASILGVCVLLTFCIGYVRKLVDLLEECGLRDKVTVVLGGYPVDALVKEYTGVDYYANDAVKAMEIFRGFIPEEKKESWPFRA
SIO_010081: TPH_RS00935
subclass of: SO_0000673
so part of: TPH_RS00935
location: 176915..177592
location: region:176915-177592:1
so has part: feature:176915-177592:1:exon

WP_015049348.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176915-177592:1:exon

TPH_RS00940
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00940
old locus tag: Tph_c01810
so part of: sequence
location: 177999..178796
location: region:177999-178796:1
so has part: feature:177999-178796:1:exon
subclass of: SO_0000010

position:177999:1
position: 177999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178796:1
position: 178796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177999-178796:1:exon

TPH_RS00940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00940
old locus tag: Tph_c01810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011391928.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyltetrahydrofolate cobalamin methyltransferase
translation: MKLLLIIGEKLNSTIPKVREAICNKDKEYIQELARKQVEAGADYLDVNTAMENEVEDMQWVVECIQEVVDAPLCIDSTNPAAVKRGLEVCKTRPMINSITMERDRLEGILPLAVEYKCPLIALTSDEKGIPKTVDERMRITEQLVEVLVKNNYNLEDLYVDPLVLPLAVNSSNASIFFQSLTGIKEKFHLKTVSGLSNVSHSLPLRRLINRYFLVICMSCGMDAAILDPLDKKIMTAVTAADLLLDKDRFARKYLQAYRAGALED
SIO_010081: TPH_RS00940
subclass of: SO_0000673
so part of: TPH_RS00940
location: 177999..178796
location: region:177999-178796:1
so has part: feature:177999-178796:1:exon

WP_236608806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177999-178796:1:exon

TPH_RS00945
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00945
old locus tag: Tph_c01820
so part of: sequence
location: complement(179086..180159)
location: region:179086-180159:-1
so has part: feature:179086-180159:-1:exon
subclass of: SO_0000010

position:179086:-1
position: 179086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180159:-1
position: 180159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179086-180159:-1:exon

TPH_RS00945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00945
old locus tag: Tph_c01820
inference: COORDINATES: protein motif:HMM:NF019450.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper amine oxidase N-terminal domain-containing protein
translation: MKRKVISVTLSLILVLSLCLTGAAAAPPDGGKAYGNVNKELDVDLLEEMDEDELEVTLRDAGPETRRPLSALEEEHPAPDIAGNPDEEGGPEPEQRGLEKAVAQAIYLDEAIKETVGGKVYGTNFAALVRQIEGTGEKNAARLSAVVRKLYHFTWRYQEILAEKEKAAEALVLLTDELVRLTYRYEMNNRVRLNIYQDAARIYSLMGCYRRAAGALELAAETAPDSEEVYKHLKHLYREKWEKKIRVYVRGKRPDFGGVEPVIRNGRTLVPVRGLAEALGGNVEWNGKNKQVTIVNGDVNITLTIGSLNATVNGRNVKLDVPAVIEKGRTLVPLRFVMENMGAKVDYDHESGLIVVL
SIO_010081: TPH_RS00945
subclass of: SO_0000673
so part of: TPH_RS00945
location: complement(179086..180159)
location: region:179086-180159:-1
so has part: feature:179086-180159:-1:exon

WP_015049350.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179086-180159:-1:exon

TPH_RS00950
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00950
old locus tag: Tph_c01830
so part of: sequence
location: complement(180480..181034)
location: region:180480-181034:-1
so has part: feature:180480-181034:-1:exon
subclass of: SO_0000010

position:180480:-1
position: 180480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181034:-1
position: 181034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180480-181034:-1:exon

TPH_RS00950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00950
old locus tag: Tph_c01830
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLRKKFIPLLLAAAVLVGAGTAYAGHGFAVRAGEKNQKQVQSQNTSNGKSWWQSFCQTTPKRIGSIIHNEGETNRLKAQVRQKSLDVKREIQQLRLQGTPLTQEQMECIRQATALLRQSRTSLSSEELSVGQVMSRLRSHKKMRNAEGCIREMDRIINIQQQRNAVLKGTLRQLEELEKTLKSA
SIO_010081: TPH_RS00950
subclass of: SO_0000673
so part of: TPH_RS00950
location: complement(180480..181034)
location: region:180480-181034:-1
so has part: feature:180480-181034:-1:exon

WP_015049351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180480-181034:-1:exon

TPH_RS00955
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00955
old locus tag: Tph_c01840
so part of: sequence
location: complement(181037..181399)
location: region:181037-181399:-1
so has part: feature:181037-181399:-1:exon
subclass of: SO_0000010

position:181037:-1
position: 181037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181399:-1
position: 181399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181037-181399:-1:exon

TPH_RS00955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00955
old locus tag: Tph_c01840
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSERVYWNKFLKFLPGIALACLLVSGAACGLRGDDAGPGGSPPSAVQTDESAGSPGAADNPGGAAEKKEEKQEEIVIKSNNRGSGEEADEMLKEVDRELDALIRALDALDAVDTGELEEG
SIO_010081: TPH_RS00955
subclass of: SO_0000673
so part of: TPH_RS00955
location: complement(181037..181399)
location: region:181037-181399:-1
so has part: feature:181037-181399:-1:exon

WP_015049352.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181037-181399:-1:exon

TPH_RS00960
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00960
old locus tag: Tph_c01850
so part of: sequence
location: 181508..181801
location: region:181508-181801:1
so has part: feature:181508-181801:1:exon
subclass of: SO_0000010

position:181508:1
position: 181508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181801:1
position: 181801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181508-181801:1:exon

TPH_RS00960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00960
old locus tag: Tph_c01850
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSILTGPAQLGHGSSRFFEAGTPPPELPGRPVTLRTDLLTAAGRPPFVCPGTCGTCERKAFRPGDHFGKGVSVPARFGVPGAGKTAAPKLRGRYLLP
SIO_010081: TPH_RS00960
subclass of: SO_0000673
so part of: TPH_RS00960
location: 181508..181801
location: region:181508-181801:1
so has part: feature:181508-181801:1:exon

WP_148275803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181508-181801:1:exon

TPH_RS16140
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS16140
old locus tag: Tph_c01860
so part of: sequence
location: complement(181798..183210)
location: region:181798-183210:-1
so has part: feature:181798-183210:-1:exon
subclass of: SO_0000010

position:181798:-1
position: 181798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183210:-1
position: 183210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181798-183210:-1:exon

TPH_RS16140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS16140
old locus tag: Tph_c01860
inference: COORDINATES: protein motif:HMM:NF014567.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MSRSIFQKLLFTYLTIVVLIVGVLAVMLTRFFNDFIFRQEQQQLLAAGREAAAGVLSCSAGRITRGELNQMVDALGAATGARLFIYQGDSARKLLSAEGGRGVKEAPLLADAKRILAGETVIRKKHFSPGLNTYVVFVGMPVKSGGEVSGMVLLFSPIDQVNRTLFRVYGIIWGAALFALLAGGAVIYLTSRRLSRPVVEITEAAAALAQGDFDKEIRASGDDEIGQLAASFDFMRKRLRDLERSRQEFIATISHELRTPLTSIRGFIQAILDGIIPPEEQKKYLRLAGAESERLTRLVSDLLELARLRAGSIRLRRSPVDLLEVAGEAAAEFRLLAGRRKIAVEPHPGSGRVMVSGDRDRLRQILLNLLSNAVKYTGEDGEILVIISRQGGQVVLTVRDNGTGIPQEELQRIFEKFQRGSRAGDASAGGSGLGLAIVKELAELHGGRVSAWSEPGRGTEISVELPGIET
SIO_010081: TPH_RS16140
subclass of: SO_0000673
so part of: TPH_RS16140
location: complement(181798..183210)
location: region:181798-183210:-1
so has part: feature:181798-183210:-1:exon

WP_015049354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181798-183210:-1:exon

TPH_RS00970
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00970
old locus tag: Tph_c01870
so part of: sequence
location: complement(183362..184042)
location: region:183362-184042:-1
so has part: feature:183362-184042:-1:exon
subclass of: SO_0000010

position:183362:-1
position: 183362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184042:-1
position: 184042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183362-184042:-1:exon

TPH_RS00970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00970
old locus tag: Tph_c01870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015739038.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MERKEKILIVDDDRNICALLELYLRREGYSLFFAHDGSAALEAFRKGKPDLVILDLMLPVISGWEVCRLIRQESDVPIIMLTARDASEDKIAGLDLGADDYVVKPFDPGEVAARVRARLRKVSGDGSAGSVFTAGNLRLNSRSYEVTCGGKQVVLTPKEFQLLEFMIRNKNIVLSRDRILEEVWGYDYPGTTRTVDMHVKKLREKLKPPAGWRIRTIYGIGYKFEA
SIO_010081: TPH_RS00970
subclass of: SO_0000673
so part of: TPH_RS00970
location: complement(183362..184042)
location: region:183362-184042:-1
so has part: feature:183362-184042:-1:exon

WP_015049355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183362-184042:-1:exon

TPH_RS00975
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00975
old locus tag: Tph_c01880
so part of: sequence
location: 184730..185815
location: region:184730-185815:1
so has part: feature:184730-185815:1:exon
subclass of: SO_0000010

position:184730:1
position: 184730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185815:1
position: 185815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184730-185815:1:exon

TPH_RS00975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00975
old locus tag: Tph_c01880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011391704.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetraprenyl-beta-curcumene synthase family protein
translation: MASDRHRRSSLAEEAKKIALLTRFVTRVFPGVERELGRWRRFLDRAGDEELRSQGLASIEKKKFHCLGGAVYALMEGAHRDTLRFIVAFQTISDYLDNLCDRTGCLEAAAFRRLHRAFTDALEPEGGTSGYYDLFPFKDDGGYLDALVAECRRVLRRLPSYPVVKDAALRLASLYCDLQTYKHTHAALREKYLEEWFAAHRDGCGDLDWWEFAAATGSTLGIFALVAAAGREGLDPAAAGEIAAGYFPWICGLHILLDYLIDQEEDRREGDLNFVFYYPDAERGVQRLSFFLRNALERASGLPDPLFHVTVVRGLPAFYLSDPKVRDQGLEEAAYRILEAGGEEALRLYRACCGLRRQGKI
SIO_010081: TPH_RS00975
subclass of: SO_0000673
so part of: TPH_RS00975
location: 184730..185815
location: region:184730-185815:1
so has part: feature:184730-185815:1:exon

WP_015049356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184730-185815:1:exon

TPH_RS00980
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00980
old locus tag: Tph_c01890
so part of: sequence
location: complement(185812..186786)
location: region:185812-186786:-1
so has part: feature:185812-186786:-1:exon
subclass of: SO_0000010

position:185812:-1
position: 185812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186786:-1
position: 186786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185812-186786:-1:exon

TPH_RS00980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00980
old locus tag: Tph_c01890
inference: COORDINATES: protein motif:HMM:NF012568.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyprenyl synthetase family protein
translation: MTSLVWQQELNLSPVLQKVERQILEITAGHNKTLGGLAARIIEAGGKRLRPLLVLLSGWKEQQDWEPLVDVAVAAELIHTASLIHDDIIDNAGKRRGLPTINSTRGNQTAVLAGDYLFARAFSLLSGRRTWRALPLMVEAIEAMCEGAIEEMATLFDHTQTEEDYLSRIYKKTASLVAACCGAGAEVGGAPPEVVHARKEFGRNLGLAFQIVDDLLDFSADEQTIGKPAGCDLIQGILTLPVIYLLQNPQCGGSIREIIAGRRCTPADFAYIKKAALETAALKRAYMKAREFQERALACLASFPPGPVRAAFERIAELVTTRKS
SIO_010081: TPH_RS00980
subclass of: SO_0000673
so part of: TPH_RS00980
location: complement(185812..186786)
location: region:185812-186786:-1
so has part: feature:185812-186786:-1:exon

WP_015049357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185812-186786:-1:exon

TPH_RS00985
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00985
old locus tag: Tph_c01900
so part of: sequence
location: complement(187054..188013)
location: region:187054-188013:-1
so has part: feature:187054-188013:-1:exon
subclass of: SO_0000010

position:187054:-1
position: 187054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188013:-1
position: 188013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187054-188013:-1:exon

TPH_RS00985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00985
old locus tag: Tph_c01900
inference: COORDINATES: protein motif:HMM:NF014069.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MKTQWVKTLQPGAEVATYFGIFDVSLAKTKSGANFLKLLLGDRTGKVEGRVWDPALAEDLYRSISPGDIVIIHGVVTEFNGLQINLETCTRVKKEEVDLNDFRPVTEKDIPQMLRQFTLELEKVSTPPLKALLKNIFTPDFLDGFGRATAARTIHHAYGGGLLEHTLEVLAYCEQVCRVQGEMIDRDLLLTGACLHDIGKLWEYDQEALTFRRTEAGRLLGGHVILGHDFVRDRIAQIGGLPGRLELHLRHLILSHHGQKEWGAVEEPHTLEAVALHHADLMSARLNQVEQVIKAGRREGHWTGYDRHLGRSIYVPESP
SIO_010081: TPH_RS00985
subclass of: SO_0000673
so part of: TPH_RS00985
location: complement(187054..188013)
location: region:187054-188013:-1
so has part: feature:187054-188013:-1:exon

WP_015049358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187054-188013:-1:exon

TPH_RS00990
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00990
old locus tag: Tph_c01910
so part of: sequence
location: 188493..189770
location: region:188493-189770:1
so has part: feature:188493-189770:1:exon
subclass of: SO_0000010

position:188493:1
position: 188493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189770:1
position: 189770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188493-189770:1:exon

TPH_RS00990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00990
old locus tag: Tph_c01910
inference: COORDINATES: protein motif:HMM:NF037653.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MMNKTREALNRELLDLVLQEKGLEALVASLGRFLERPVLMLDGDFNPLASSDKEAIFKAGEIKTGLLENYPSTAGRSRVVVAADGEPLPLLLQPVRAGAELFGFLCLLEEEGALCPPDEEAVEQAALVAALDFQKRRAVEEIERRYLNDFVRDLLEGRIETRATALHRGNIYKWDVTRPQVLFAIKLVTPSGYGIAHPSIAGRMQYLHRLESRIRSVMLEHSKNDYLVAHMGDVNVMLLVPEADSPASVKQECLNIAGRLIPQLQKGIDEQELIVKIGISRVCRDYSELPDAFREALEAIQMNVEMNSSGAVVHYDDLGMSRLLMRVEDTRELEKYCEEHLGDLIRYDESCGTELLKTLIAVIEADGNLRQASEKLYIHYNTLRYRLRRIKELAGIDFSCWQKVARVVVAIQVYRILRARKKIAQ
SIO_010081: TPH_RS00990
subclass of: SO_0000673
so part of: TPH_RS00990
location: 188493..189770
location: region:188493-189770:1
so has part: feature:188493-189770:1:exon

WP_236608842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188493-189770:1:exon

TPH_RS14980
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS14980
old locus tag: Tph_c01920
so part of: sequence
location: 190190..190372
location: region:190190-190372:1
so has part: feature:190190-190372:1:exon
subclass of: SO_0000010

position:190190:1
position: 190190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190372:1
position: 190372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190190-190372:1:exon

TPH_RS14980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS14980
old locus tag: Tph_c01920
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVEDRELARILEEVSEEMELMKQRLLWKITCHRKRREAGSDENDGRPPEKREWSFFSLD
SIO_010081: TPH_RS14980
subclass of: SO_0000673
so part of: TPH_RS14980
location: 190190..190372
location: region:190190-190372:1
so has part: feature:190190-190372:1:exon

WP_148275804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190190-190372:1:exon

TPH_RS00995
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS00995
so part of: sequence
location: 190531..190728
location: region:190531-190728:1
so has part: feature:190531-190728:1:exon
subclass of: SO_0000010

position:190531:1
position: 190531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190728:1
position: 190728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190531-190728:1:exon

TPH_RS00995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS00995
inference: COORDINATES: protein motif:HMM:NF018012.2
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: trimethylamine methyltransferase family protein
translation: MRTEFYYPRVATRTNYETWEAAGGKDTWTKAEEEARKILENHRPQRLPDDVVARIMEMEPGIIAV
SIO_010081: TPH_RS00995
subclass of: SO_0000673
so part of: TPH_RS00995
location: 190531..190728
location: region:190531-190728:1
so has part: feature:190531-190728:1:exon

WP_028991195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190531-190728:1:exon

TPH_RS01000
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01000
old locus tag: Tph_c01930
so part of: sequence
location: 190896..190970
location: region:190896-190970:1
so has part: feature:190896-190970:1:exon
subclass of: SO_0000663

position:190896:1
position: 190896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190970:1
position: 190970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190896-190970:1:exon

TPH_RS01000
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1089553
locus tag: TPH_RS01000
old locus tag: Tph_c01930
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.9
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:190928..190930,aa:Gly,seq:ccc)
SIO_010081: TPH_RS01000
subclass of: SO_0000673
so part of: TPH_RS01000
location: 190896..190970
location: region:190896-190970:1
so has part: feature:190896-190970:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:190896-190970:1:exon

TPH_RS01005
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01005
old locus tag: Tph_c01940
so part of: sequence
location: complement(191056..191481)
location: region:191056-191481:-1
so has part: feature:191056-191481:-1:exon
subclass of: SO_0000010

position:191056:-1
position: 191056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191481:-1
position: 191481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191056-191481:-1:exon

TPH_RS01005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01005
old locus tag: Tph_c01940
inference: COORDINATES: protein motif:HMM:NF013970.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PIN domain-containing protein
translation: MRQIFVDTSFWYAHAFAGDPHHQEAAAFLNHISATLVTSNFVFDELMTILRYDFGHHVAVKYGKHLRESKICTLIRLNADDEETAWSLFLKYGDQNFSFTDCTSFALMRRLGINEAAAFDGHFDAAGFIRLPEVPLRKNPR
SIO_010081: TPH_RS01005
subclass of: SO_0000673
so part of: TPH_RS01005
location: complement(191056..191481)
location: region:191056-191481:-1
so has part: feature:191056-191481:-1:exon

WP_015049361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191056-191481:-1:exon

TPH_RS01010
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01010
old locus tag: Tph_c01950
so part of: sequence
location: complement(191488..191715)
location: region:191488-191715:-1
so has part: feature:191488-191715:-1:exon
subclass of: SO_0000010

position:191488:-1
position: 191488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191715:-1
position: 191715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191488-191715:-1:exon

TPH_RS01010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01010
old locus tag: Tph_c01950
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRRMQVVVEEWQYEVLRAIAGRQGKSVSAILREMISSQISKTSGKDPLLEAAGIAQATPEKDLGSETIDERLYKA
SIO_010081: TPH_RS01010
subclass of: SO_0000673
so part of: TPH_RS01010
location: complement(191488..191715)
location: region:191488-191715:-1
so has part: feature:191488-191715:-1:exon

WP_015049362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191488-191715:-1:exon

TPH_RS01015
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01015
old locus tag: Tph_c01960
so part of: sequence
location: 192014..192241
location: region:192014-192241:1
so has part: feature:192014-192241:1:exon
subclass of: SO_0000010

position:192014:1
position: 192014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192241:1
position: 192241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192014-192241:1:exon

TPH_RS01015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01015
old locus tag: Tph_c01960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013821627.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicB family antitoxin
translation: MARFIVYLEPAEEGGYIASVPALPGCVTQGETKEEALAMAEDAIRGYIESLKKHGEPLPFGFEKAEVETITVDVA
SIO_010081: TPH_RS01015
subclass of: SO_0000673
so part of: TPH_RS01015
location: 192014..192241
location: region:192014-192241:1
so has part: feature:192014-192241:1:exon

WP_013821627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192014-192241:1:exon

TPH_RS01020
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01020
so part of: sequence
location: 192244..192471
location: region:192244-192471:1
so has part: feature:192244-192471:1:exon
subclass of: SO_0000010

position:192244:1
position: 192244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192471:1
position: 192471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192244-192471:1:exon

TPH_RS01020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01020
inference: COORDINATES: protein motif:HMM:NF019540.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicA family toxin
translation: MGKPPVLKAREVIAALQKLGFEVDRATGSHYILRHPDGRRTVVPYHGNRDIKQGVLRSILRQAGLTVDEFKSLLT
SIO_010081: TPH_RS01020
subclass of: SO_0000673
so part of: TPH_RS01020
location: 192244..192471
location: region:192244-192471:1
so has part: feature:192244-192471:1:exon

WP_028991194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192244-192471:1:exon

TPH_RS01025
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01025
old locus tag: Tph_c01970
so part of: sequence
location: complement(192521..192997)
location: region:192521-192997:-1
so has part: feature:192521-192997:-1:exon
subclass of: SO_0000010

position:192521:-1
position: 192521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192997:-1
position: 192997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192521-192997:-1:exon

TPH_RS01025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01025
old locus tag: Tph_c01970
inference: COORDINATES: protein motif:HMM:NF013970.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MKKSSRTADPAVERYTLDTYAVLSYLRDEFCADEVASLLQAGKSGRALLYFSWINLGEVFCIVQRRNGHDTARSIVEMIKEWPVRLVLPSQEDILSAGEVKAKYPLSYADAFAVALARSKQAYLVTGDMEFKKPEEDGMVKVRWLKNGPNHRSGRGLD
SIO_010081: TPH_RS01025
subclass of: SO_0000673
so part of: TPH_RS01025
location: complement(192521..192997)
location: region:192521-192997:-1
so has part: feature:192521-192997:-1:exon

WP_015049363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192521-192997:-1:exon

TPH_RS01030
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01030
old locus tag: Tph_c01980
so part of: sequence
location: complement(192972..193223)
location: region:192972-193223:-1
so has part: feature:192972-193223:-1:exon
subclass of: SO_0000010

position:192972:-1
position: 192972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193223:-1
position: 193223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192972-193223:-1:exon

TPH_RS01030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01030
old locus tag: Tph_c01980
inference: COORDINATES: protein motif:HMM:TIGR01439.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MNVSRVSPRGQVVIPKHLRDKFNIKPNSKVYFTESDGKLVLHILPPDPVAAARGILQKDIPLDELIRQNREEELSYEKEFQNR
SIO_010081: TPH_RS01030
subclass of: SO_0000673
so part of: TPH_RS01030
location: complement(192972..193223)
location: region:192972-193223:-1
so has part: feature:192972-193223:-1:exon

WP_015049364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192972-193223:-1:exon

TPH_RS01035
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01035
old locus tag: Tph_c01990
so part of: sequence
location: 193597..194766
location: region:193597-194766:1
so has part: feature:193597-194766:1:exon
subclass of: SO_0000010

position:193597:1
position: 193597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194766:1
position: 194766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193597-194766:1:exon

TPH_RS01035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01035
old locus tag: Tph_c01990
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: SGNH/GDSL hydrolase family protein
translation: MPDLEKMRRFLQPRSLKRVFAITLALLLLAEIATPSLLAEYYRRRSRSYVFHERLPRSFERIHLDLPSAIDYIRQNEGRYDVNVLFLGDSVAYGAGAGERESIPAYLEKELAARLPGRKVRVWNLAVPGSEPGDLYCLLRRVEGLRPDLVVADFNMIFYGKASIEDPIAFDWLYLDEGLPEDAAKAVDRIYPRRGKERIGEFFARHWQLYGKREVINAVLFGSHPRKKLEELVRGCLSSIAPAVLRSATTDEAAGAEKPFEDAEARRRQRERVAFMYSPAPVDPATNEAYLFTKEILEHLNRSGQRALVFMTDQNVEILGDLITCAAYEHNVRVVDGLLRRGPVPYISFYGKIPSWMFTDHVHLNAAGNRHVAGILAEHLAPMLGGGES
SIO_010081: TPH_RS01035
subclass of: SO_0000673
so part of: TPH_RS01035
location: 193597..194766
location: region:193597-194766:1
so has part: feature:193597-194766:1:exon

WP_015049365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193597-194766:1:exon

TPH_RS01040
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01040
old locus tag: Tph_c02000
so part of: sequence
location: 194763..196049
location: region:194763-196049:1
so has part: feature:194763-196049:1:exon
subclass of: SO_0000010

position:194763:1
position: 194763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196049:1
position: 196049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194763-196049:1:exon

TPH_RS01040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01040
old locus tag: Tph_c02000
inference: COORDINATES: protein motif:HMM:NF015049.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBOAT family protein
translation: MIFTTGVFAIFLAVVLPVYWLLPCRWRKGFLTVAGMIFYFYSYPLHLLLVLVMTVVTYLIALGILRARETEEALPSDENGSGSDLRRAPGAGWPALRAKILAVLGICLAAGVLGYFKYWKMVVATLNGISRHLHHETLFPQPEILVPLAISFFTFEFIHFLADVYLGKIRRHQMNFHDYLLFIFFFPTLVSGPIKRYQGFHEQSEGMPVFRVDDLLEGAKRVILGLAQKFILADTAGQFTAALATPEQAGAGALILAVYAYSLKIYFDFAGYSDMAIGLARMLGFRVPENFDRPYFQPNIGEFWRHWHMSLSSWIRDYLYIPLGGNRRGFGRTLFNLVTAFAICGLWHGSAWNFVAWGLWHGFGLAGYRIWRRCLGDRIPRGGVLLRAVNVFITFHFVTAGWILFASPSIGSALITFQKIIGAIWRVL
SIO_010081: TPH_RS01040
subclass of: SO_0000673
so part of: TPH_RS01040
location: 194763..196049
location: region:194763-196049:1
so has part: feature:194763-196049:1:exon

WP_015049366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194763-196049:1:exon

TPH_RS16145
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS16145
old locus tag: Tph_c02010
so part of: sequence
location: 196159..196293
location: region:196159-196293:1
so has part: feature:196159-196293:1:exon
subclass of: SO_0000010

position:196159:1
position: 196159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196293:1
position: 196293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196159-196293:1:exon

TPH_RS16145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS16145
old locus tag: Tph_c02010
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRTFMNFFIGLGIDLGWGFFLFFLIVLCVLFSTGVEARFIYTDF
SIO_010081: TPH_RS16145
subclass of: SO_0000673
so part of: TPH_RS16145
location: 196159..196293
location: region:196159-196293:1
so has part: feature:196159-196293:1:exon

WP_015049367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196159-196293:1:exon

TPH_RS01045
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01045
so part of: sequence
location: 196827..197051
location: region:196827-197051:1
so has part: feature:196827-197051:1:exon
subclass of: SO_0000010

position:196827:1
position: 196827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197051:1
position: 197051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196827-197051:1:exon

TPH_RS01045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01045
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAGDVEYTFLGGSWLERRQSAAGGGASGSPAEAGNTHIKGNAKYDTRKERRDKVTCRPTTCKETVRQSLKTPQA
SIO_010081: TPH_RS01045
subclass of: SO_0000673
so part of: TPH_RS01045
location: 196827..197051
location: region:196827-197051:1
so has part: feature:196827-197051:1:exon

WP_028991193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196827-197051:1:exon

TPH_RS01050
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01050
old locus tag: Tph_c02020
so part of: sequence
location: 197107..199260
location: region:197107-199260:1
so has part: feature:197107-199260:1:exon
subclass of: SO_0000010

position:197107:1
position: 197107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199260:1
position: 199260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197107-199260:1:exon

TPH_RS01050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01050
old locus tag: Tph_c02020
inference: COORDINATES: protein motif:HMM:NF019450.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper amine oxidase N-terminal domain-containing protein
translation: MLKTRKRWISLLVMLAMLVTFVVPFAGPASAGAASYNTVTQVPKFDPSTAGTITSATVQVKVDPAVSDILSKAWIEVLDANGKQLNIRSVVYSSSSGIGQYTLTALDSKKAELTFTPDGSKDKATFNFTVDFYGKDCAAGDVSLNFFNTSGQLEGGKVVVARALGGQVELALVGSAPTFGVDTYGTVTIRLTQAVSGSLKRGTESVKIKLPAGFKWSNPSPGSGAVTASVTTDEPRLLKVNVSTDTTTYPSIPSVVDISARVQVDDEDVAKTGDVVATIEGGNDTTVTPSEITVAKYAEYGVKVSVASVKTLLSGILDEKTDKITIEELVEDSLINGRKVTVELPDWVKIRDCIDRSSDLTSYATSLTWSDNKLTFYPSGDKGDTRKYEFKLKLSIEAGRAGDIEAAVSGAGAPETKVVVAKAAPAVSGTATPTDVKIGVQAQAAPDLVITEAAGGAIKQGTNRSIAIILPSGVTFAATPTVEVVSGDLELKADQARVTDAVYTSDNTVTYGSNRVFEVPVKSESLRASTIKISGIKLTLDRTVPEGDLKVKIGGLAVVENYGTGDNEFRTDAAAEVVLAKCVTPAPGETKGVAVFKIGEKKYTVNGQEFEMDVAPIAEAGRTYLPARFVANAMGVPDANILWDQASKTVTVIRGERFVQMKVGSKQILVNGITLNMDVAPKVVPGRVLIPFRFLAQALGAEVVWDPADPNTIILNF
SIO_010081: TPH_RS01050
subclass of: SO_0000673
so part of: TPH_RS01050
location: 197107..199260
location: region:197107-199260:1
so has part: feature:197107-199260:1:exon

WP_015049368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197107-199260:1:exon

TPH_RS01055
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01055
old locus tag: Tph_c02030
so part of: sequence
location: 199499..201079
location: region:199499-201079:1
so has part: feature:199499-201079:1:exon
subclass of: SO_0000010

position:199499:1
position: 199499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201079:1
position: 201079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199499-201079:1:exon

TPH_RS01055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01055
old locus tag: Tph_c02030
inference: COORDINATES: protein motif:HMM:NF014385.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stalk domain-containing protein
translation: MLVKKPRSIMLALFLFLCFTAGAALPVSWAKEPASPELSLKEAVLMAWSNSEDVKAAELGVEKAEEQRQDASHFVEMIPASGPSGNPNAAIIWTNFLKADIAWQMAKKDLQQKKDNIVVDVFTKYYTVINCQDKLKKAEVDLARDEEALRVARAGFRAGTVTGAAVTGAEARAEASRKALEAARAELEKAYISFNKVVGLWPEDRPVLTDALSFTPLEIDSLDAEAARAVENSKDIWKLKQLVAIEQLDVDYPWGIGSGGVSYKYYDVEKPDVDIAELNVAAAESAIKEKVRTLYQDIRATEEQYNALLAAKQAAEEQLRVARALYDCGMTTLEKLKEAEAGCAEVENNIAGLVYKHAIQVANFNLLTGRPVVKGISDEELAAERKEQAKRDESENTEPEPTVVRFVMGEKSFRVNDRDVEMDVAPYAIDGRAFLPVRYAAQALGIPDENITWDGKTGMVTLVKGDRKITMKVGSRVMLVNTRVVEMDVAPQVKDGRVFLPVRYLGEALGAEFNWNYIRREVTVTI
SIO_010081: TPH_RS01055
subclass of: SO_0000673
so part of: TPH_RS01055
location: 199499..201079
location: region:199499-201079:1
so has part: feature:199499-201079:1:exon

WP_015049369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199499-201079:1:exon

TPH_RS01060
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01060
old locus tag: Tph_c02040
so part of: sequence
location: 201577..202458
location: region:201577-202458:1
so has part: feature:201577-202458:1:exon
subclass of: SO_0000010

position:201577:1
position: 201577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202458:1
position: 202458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201577-202458:1:exon

TPH_RS01060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01060
old locus tag: Tph_c02040
EC number: 2.4.2.45
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011393491.1
GO function: GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: decaprenyl-phosphate phosphoribosyltransferase
translation: MDYVRLLRPKQWLKNFFVFAALVFSRSACDPVLLGRTAAAFAVFCALSSGVYVLNDIYDRERDRLHPVKRNRPIASGRVPVGAAGTYAALLLAAGVTGGFLVNAELGLVALTYALLMAGYSLRLKELVLLDVFTIAAGFLLRVVAGVAAIGVSLSPWLFLCTLFLSLFLALGKRRHELFLLSEGAGEHRPALDGYSQAFIDQMISIATSATIISYSLYTFLAPTSRLLMVTIPFVLYGLFRYLYVIYRTGGGGAPEDVLVGDRPLQAAVLLWIITCFLILYLGEAPGVPVLAP
SIO_010081: TPH_RS01060
subclass of: SO_0000673
so part of: TPH_RS01060
location: 201577..202458
location: region:201577-202458:1
so has part: feature:201577-202458:1:exon

WP_015049370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201577-202458:1:exon

TPH_RS01065
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01065
old locus tag: Tph_c02050
so part of: sequence
location: 202592..202867
location: region:202592-202867:1
so has part: feature:202592-202867:1:exon
subclass of: SO_0000010

position:202592:1
position: 202592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202867:1
position: 202867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202592-202867:1:exon

TPH_RS01065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01065
old locus tag: Tph_c02050
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MIEASGRVTGKGQVQVPKKIGDFLGIKSGDGLVFRLSPHRTLTVHVRKARRLSELAGCLPPKRPFPGIAEEEDAARRKYAGKAAWMLKNGN
SIO_010081: TPH_RS01065
subclass of: SO_0000673
so part of: TPH_RS01065
location: 202592..202867
location: region:202592-202867:1
so has part: feature:202592-202867:1:exon

WP_015049371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202592-202867:1:exon

TPH_RS01070
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01070
old locus tag: Tph_c02060
so part of: sequence
location: 202993..203226
location: region:202993-203226:1
so has part: feature:202993-203226:1:exon
subclass of: SO_0000010

position:202993:1
position: 202993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203226:1
position: 203226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202993-203226:1:exon

TPH_RS01070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01070
old locus tag: Tph_c02060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049377.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF433 domain-containing protein
translation: MNRRNLLKRITIDKNILCGKPVISGTRISVELILEKLANGLSVKEITEEYGIQEQDVRAALIYAQKTIANEEVFEVI
SIO_010081: TPH_RS01070
subclass of: SO_0000673
so part of: TPH_RS01070
location: 202993..203226
location: region:202993-203226:1
so has part: feature:202993-203226:1:exon

WP_015049372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202993-203226:1:exon

TPH_RS01075
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01075
old locus tag: Tph_c02070
pseudo: true
so part of: sequence
location: <203346..>203832
location: region:203346-203832:1
so has part: feature:203346-203832:1:exon
subclass of: SO_0000010

position:203346:1
position: 203346
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:203832:1
position: 203832
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203346-203832:1:exon

TPH_RS01075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01075
old locus tag: Tph_c02070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012301814.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: TPH_RS01075
subclass of: SO_0000673
so part of: TPH_RS01075
location: <203346..>203832
location: region:203346-203832:1
so has part: feature:203346-203832:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:203346-203832:1:exon

TPH_RS01080
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01080
old locus tag: Tph_c02080
so part of: sequence
location: 204110..204352
location: region:204110-204352:1
so has part: feature:204110-204352:1:exon
subclass of: SO_0000010

position:204110:1
position: 204110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204352:1
position: 204352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204110-204352:1:exon

TPH_RS01080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01080
old locus tag: Tph_c02080
inference: COORDINATES: protein motif:HMM:NF013561.2
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix protein, CopG family
translation: MRETVIWTVSLPPQMAEKAEALARVENRSKSELIREALRQYMALREWEQMQSKASLKAQALGITDESKVEQIIDEMRQGQ
SIO_010081: TPH_RS01080
subclass of: SO_0000673
so part of: TPH_RS01080
location: 204110..204352
location: region:204110-204352:1
so has part: feature:204110-204352:1:exon

WP_015049374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204110-204352:1:exon

TPH_RS01085
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01085
old locus tag: Tph_c02090
so part of: sequence
location: complement(204606..204902)
location: region:204606-204902:-1
so has part: feature:204606-204902:-1:exon
subclass of: SO_0000010

position:204606:-1
position: 204606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204902:-1
position: 204902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204606-204902:-1:exon

TPH_RS01085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01085
old locus tag: Tph_c02090
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MCPEGCFRWGGPVSEGDIVDREDFISSVQTRLADGQSVMLSGPRRIGKTSIAYEVIRRLKQKGFYTASVDFFRISDRRELAVSLIDTCLENRTGIRLF
SIO_010081: TPH_RS01085
subclass of: SO_0000673
so part of: TPH_RS01085
location: complement(204606..204902)
location: region:204606-204902:-1
so has part: feature:204606-204902:-1:exon

WP_015049375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204606-204902:-1:exon

TPH_RS01090
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01090
old locus tag: Tph_c02100
so part of: sequence
location: 205545..207614
location: region:205545-207614:1
so has part: feature:205545-207614:1:exon
subclass of: SO_0000010

position:205545:1
position: 205545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207614:1
position: 207614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205545-207614:1:exon

TPH_RS01090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01090
old locus tag: Tph_c02100
inference: COORDINATES: protein motif:HMM:NF014763.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MRGSQKSVRTLLIAVIVGLTALIFAVLAGYTGSSIRSYIVDEIGRSLTLQAGEEAQKLYGRIVEVGKCSELLALNVAAVGYRNSEQLLSIAKKYVEEHELLCGSGIWLEPYLYDENTKYYGPYMYKDPSQGKVELTWDYSNADYDYFQYDWYKIGLNAEGKTAWTEPFLDEVSGIYMITCSSPIRVDGRVIGVATADIGLDNLREYVRSIKVGKKGYAFVVTRDGYFLGSREPEKDLKQKITEDEGTREIGKAILSGESGVRQARFQGEDCFVSFASIGDTGMKLVEVLPQAEAFASLNNMLKVNMLILIIALAAFVILLSTVLQRKVIRPLNAVMSGARKVAEGDLAGYQAEKKDDSGYAPDELGQLRQSFDGMVDSLRGLILRISDAASSLVSSSQQLKTAAEQSAAVSEQIAATTNELTEGVSEQARLTQDGSRMVSEMLDQLKRVVQNLEASEEYTRNVDEAVENGREKISYQKQKMEENKEKTLGLEAAVSSLGEKSRQIGDIVGVIVGIADQTNLLALNAAIEAARAGEQGRGFAVVAEEVRKLAEQSAQATREIRTIIEEIQNGIDSATAEMKKAISAVGEQETAVEFTSQAFNRINEAIRGLLEEIRDVSRMAAELSRNAEEVKTGIERVAEISQESAAGTEELAASTEEQTASDQEISRAAEKLAELAAQLQEQVKKFRL
SIO_010081: TPH_RS01090
subclass of: SO_0000673
so part of: TPH_RS01090
location: 205545..207614
location: region:205545-207614:1
so has part: feature:205545-207614:1:exon

WP_015049376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205545-207614:1:exon

TPH_RS01095
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01095
old locus tag: Tph_c02110
so part of: sequence
location: 207880..208125
location: region:207880-208125:1
so has part: feature:207880-208125:1:exon
subclass of: SO_0000010

position:207880:1
position: 207880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208125:1
position: 208125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207880-208125:1:exon

TPH_RS01095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01095
old locus tag: Tph_c02110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011391714.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF433 domain-containing protein
translation: MNPLLQRITIDPNVCFGKPCIRGTRIWVSLILDLLANGMTFDEILDEFPQLEVDDVKAAIAYGAEMARERYVEIPLREATG
SIO_010081: TPH_RS01095
subclass of: SO_0000673
so part of: TPH_RS01095
location: 207880..208125
location: region:207880-208125:1
so has part: feature:207880-208125:1:exon

WP_015049377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207880-208125:1:exon

TPH_RS01100
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01100
old locus tag: Tph_c02120
so part of: sequence
location: 208122..208490
location: region:208122-208490:1
so has part: feature:208122-208490:1:exon
subclass of: SO_0000010

position:208122:1
position: 208122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208490:1
position: 208490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208122-208490:1:exon

TPH_RS01100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01100
old locus tag: Tph_c02120
inference: COORDINATES: protein motif:HMM:NF037832.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5615 family PIN-like protein
translation: MRFKLDENLGKSIQQIFQEAGHDVQTVLDEKMGGRSDQTVYEACCSENRCLVTLDLDFANILRFPPEKTAGIVVFRIPKNTDLAKLRELVIQFLEAIERMPIAQQVWIVEPRRIRIHQKETD
SIO_010081: TPH_RS01100
subclass of: SO_0000673
so part of: TPH_RS01100
location: 208122..208490
location: region:208122-208490:1
so has part: feature:208122-208490:1:exon

WP_015049378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208122-208490:1:exon

TPH_RS01105
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01105
old locus tag: Tph_c02130
so part of: sequence
location: 209111..209707
location: region:209111-209707:1
so has part: feature:209111-209707:1:exon
subclass of: SO_0000010

position:209111:1
position: 209111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209707:1
position: 209707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209111-209707:1:exon

TPH_RS01105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01105
old locus tag: Tph_c02130
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDVLVDLKKLQQVVESFGSNPLIEKTIRKLISLRKQELKRTLRHLSEEIKALEQRYQLSSSDFQKRYAEGALGDDVDLIKWASFLDMQQRVQAQLGASREMTTARYFERLKMMLLQLEFVEEVIVREELITDDFGYLRLRFTLSNGDIVELFEYVVKDQNAIRTVNYSFHLQDANADFQGGRKAGRACRSAPGAGEKL
SIO_010081: TPH_RS01105
subclass of: SO_0000673
so part of: TPH_RS01105
location: 209111..209707
location: region:209111-209707:1
so has part: feature:209111-209707:1:exon

WP_015049379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209111-209707:1:exon

TPH_RS01110
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01110
old locus tag: Tph_c02150
so part of: sequence
location: 209921..211054
location: region:209921-211054:1
so has part: feature:209921-211054:1:exon
subclass of: SO_0000010

position:209921:1
position: 209921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211054:1
position: 211054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209921-211054:1:exon

TPH_RS01110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01110
old locus tag: Tph_c02150
inference: COORDINATES: protein motif:HMM:NF015948.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF362 domain-containing protein
translation: MPLSREMRIKVEKGPQKRPLVAVLKTTPETVLRDYGRLLELARLKDALDPSLPTIVKLNLSWTKYFPACSTEPWQLDGVLKALFEAGFRRENLFPVENKTVVTDPLKGAENNAWLPVLKRYDLEFIPLPGVKWVRYRPKGKLLKLDQIFPEGIYIPEMFIGKQVLHLPTLKTHGHSVTTGAIKNSFGGLLQEVRHYCHKYIHEVLADLMVIQREIHPGIFAVMDGTVAGDGAGPRTMVPRIKNVILAGADSVALDAVAAKIMGFDPLAIPYLRLCHELGLGVADPREIEVVGEDIGGMNFGFRTKRSFVIWGDQMIRKGPLRPFEHLLLHTKLVAWAPLASNIYHDCLWYPTVGRSRIREFQKTGWGRLFRRYAGEE
SIO_010081: TPH_RS01110
subclass of: SO_0000673
so part of: TPH_RS01110
location: 209921..211054
location: region:209921-211054:1
so has part: feature:209921-211054:1:exon

WP_015049381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209921-211054:1:exon

TPH_RS01115
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01115
old locus tag: Tph_c02160
so part of: sequence
location: 211182..211433
location: region:211182-211433:1
so has part: feature:211182-211433:1:exon
subclass of: SO_0000010

position:211182:1
position: 211182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211433:1
position: 211433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211182-211433:1:exon

TPH_RS01115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01115
old locus tag: Tph_c02160
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSALEKVSQDFLALTLQEKLEFLKRITNTPPGEWVEMDGKLHFIPEGPPATEEEEEVFQRENEEIDAGRGITLHELKKKFEV
SIO_010081: TPH_RS01115
subclass of: SO_0000673
so part of: TPH_RS01115
location: 211182..211433
location: region:211182-211433:1
so has part: feature:211182-211433:1:exon

WP_015049382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211182-211433:1:exon

TPH_RS01120
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01120
old locus tag: Tph_c02170
so part of: sequence
location: 211590..211982
location: region:211590-211982:1
so has part: feature:211590-211982:1:exon
subclass of: SO_0000010

position:211590:1
position: 211590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211982:1
position: 211982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211590-211982:1:exon

TPH_RS01120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01120
old locus tag: Tph_c02170
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: METAGAGQAALTTYLLLAASMLLNALANFTIKLAVRGEELDLAPAHLGATLKTLAADPVLWCGLALFGLAFVGYTLVLSRLNLSTAYPAMAGGGFLLVFFLSALYLKEAVTGAHLGGAFLIILGMWLLLR
SIO_010081: TPH_RS01120
subclass of: SO_0000673
so part of: TPH_RS01120
location: 211590..211982
location: region:211590-211982:1
so has part: feature:211590-211982:1:exon

WP_015049383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211590-211982:1:exon

TPH_RS01125
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01125
old locus tag: Tph_c02180
so part of: sequence
location: 212089..213846
location: region:212089-213846:1
so has part: feature:212089-213846:1:exon
subclass of: SO_0000010

position:212089:1
position: 212089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213846:1
position: 213846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212089-213846:1:exon

TPH_RS01125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01125
old locus tag: Tph_c02180
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF024629.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 39 protein
translation: MERFGRSRELKGGAGRARGVRSGAGRRAGAPLRLSVPLLGVLAVAAFALCFWHSYYDSAFMGLIYNDAQDYASIARNVASGRGLISQYLTPLSLAHFGVPQPDVWRAPLWPLLLAAFQRVFGFIDEASALAGGFCFAAGAALTFLLGRRWFNTPVALAAAALCAFSGQLLSFSISGLTEPLAVLLMAGWLYLLTAAPLSPWGPFLAGLGGGVFYLARYNALLFFLPALVYLWWVRRPRREPRPDLGAPFGAGRKGDALQGAAGGRRRAAFAAPAALFVLGFLLAAGPWLWRNCALTGNPFFSLQQYEPVMFTRTYPEYSLYRRAEIVDVAGFLLSHLEEVGEKVAAGWGEFAGGFWKPEFTGVALPVFILFLLSLALPLDASFPAQRGVRPLLISCFLLQLAALLPLHYIPRLFIIFAPLYAIYACGAVWQLAAGGLRLLRLPAVSAAVLAAALLAAFTISGVRANYPDFHPEPPGPHPRSLRAEAISDVRRALSPDRVVVSDSGHIFAWYGERYALKLPYSPADLPEVARLAPVGALFLSNWITWNSPDADPAWVEVYLSRPPALHGLRLAKVYPDGSLLYLAD
SIO_010081: TPH_RS01125
subclass of: SO_0000673
so part of: TPH_RS01125
location: 212089..213846
location: region:212089-213846:1
so has part: feature:212089-213846:1:exon

WP_028991189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212089-213846:1:exon

TPH_RS01130
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01130
old locus tag: Tph_c02190
so part of: sequence
location: complement(214239..214604)
location: region:214239-214604:-1
so has part: feature:214239-214604:-1:exon
subclass of: SO_0000010

position:214239:-1
position: 214239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214604:-1
position: 214604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214239-214604:-1:exon

TPH_RS01130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01130
old locus tag: Tph_c02190
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRCEKCQADVPEDEIYGHAGMKLCEDCYIAALTRPQPCDPGAVSAARTARELQGQKGTDGLTPLQKKIYDYLKEKGKATREEIAGALGISPEELQNNFAVLRHCELARACKEGDAIYLTLM
SIO_010081: TPH_RS01130
subclass of: SO_0000673
so part of: TPH_RS01130
location: complement(214239..214604)
location: region:214239-214604:-1
so has part: feature:214239-214604:-1:exon

WP_015049385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214239-214604:-1:exon

TPH_RS14995
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS14995
so part of: sequence
location: complement(214604..214852)
location: region:214604-214852:-1
so has part: feature:214604-214852:-1:exon
subclass of: SO_0000010

position:214852:-1
position: 214852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214604-214852:-1:exon

TPH_RS14995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS14995
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDLLRGQTLRLAEAVRNLLRSIPELSRSEPSSCPAWNRESSGRPAGYAIYFHDRDAVSQKGAGSTPDASYQPLTSTDREVEE
SIO_010081: TPH_RS14995
subclass of: SO_0000673
so part of: TPH_RS14995
location: complement(214604..214852)
location: region:214604-214852:-1
so has part: feature:214604-214852:-1:exon

WP_148275807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214604-214852:-1:exon

TPH_RS15840
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15840
pseudo: true
so part of: sequence
location: complement(215052..215330)
location: region:215052-215330:-1
so has part: feature:215052-215330:-1:exon
subclass of: SO_0000010

position:215052:-1
position: 215052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215330:-1
position: 215330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215052-215330:-1:exon

TPH_RS15840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15840
inference: COORDINATES: protein motif:HMM:NF014664.2
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: carboxymuconolactone decarboxylase family protein
SIO_010081: TPH_RS15840
subclass of: SO_0000673
so part of: TPH_RS15840
location: complement(215052..215330)
location: region:215052-215330:-1
so has part: feature:215052-215330:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:215052-215330:-1:exon

TPH_RS01145
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01145
old locus tag: Tph_c02220
so part of: sequence
location: 215777..216178
location: region:215777-216178:1
so has part: feature:215777-216178:1:exon
subclass of: SO_0000010

position:215777:1
position: 215777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216178:1
position: 216178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215777-216178:1:exon

TPH_RS01145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01145
old locus tag: Tph_c02220
inference: COORDINATES: protein motif:HMM:NF015513.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PadR family transcriptional regulator
translation: MFSGDGCGLPGSGAGSGPRCAGGPRKFIEPYLLLFLKERTAYGYELIEMFARFGFDPLPDPGAVYRNLRRMEEEGLVESRWELEGSGLPRRFYRLTGEGDAVLRAWVRKFKTNRDIADEFINYYRRIAGEKDE
SIO_010081: TPH_RS01145
subclass of: SO_0000673
so part of: TPH_RS01145
location: 215777..216178
location: region:215777-216178:1
so has part: feature:215777-216178:1:exon

WP_015049388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215777-216178:1:exon

TPH_RS01150
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01150
old locus tag: Tph_c02230
so part of: sequence
location: complement(216180..217268)
location: region:216180-217268:-1
so has part: feature:216180-217268:-1:exon
subclass of: SO_0000010

position:216180:-1
position: 216180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217268:-1
position: 217268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216180-217268:-1:exon

TPH_RS01150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01150
old locus tag: Tph_c02230
inference: COORDINATES: protein motif:HMM:NF017181.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M42 family metallopeptidase
translation: MEETTLELLKTLTETPGVSGFEAPIRKVLRDYLEPLAEELHTDHLGSLVAVKKGTSEEPKLMIAAHMDEVGFLVTRVTADGFVKFQPLGGWWEQVLLAQRVEILTEKGRVIGVIGAKSPHILTAEERAKPVKISAMYIDVGSTSREETEQAGVRQGNPVVPSSSFHLCANGKTFMARALDDRVGCALVVELFRELKKVQHPNAVYGVMTVQEEVGLRGAATSVDVVRPDLALVIDVSVATDTPGIGENDVAIRTQLGKGPVIGFYDASMIPHTPFRDLVVRTAQENDIPYQVDVMPGGGTDAGKIHLFRQGVPSVVIGIPVRYIHDHTGMAHLDDYRNALRLITALARSLDAAVLEGLLRNL
SIO_010081: TPH_RS01150
subclass of: SO_0000673
so part of: TPH_RS01150
location: complement(216180..217268)
location: region:216180-217268:-1
so has part: feature:216180-217268:-1:exon

WP_015049389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216180-217268:-1:exon

TPH_RS01155
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01155
old locus tag: Tph_c02240
so part of: sequence
location: 217601..219097
location: region:217601-219097:1
so has part: feature:217601-219097:1:exon
subclass of: SO_0000010

position:217601:1
position: 217601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219097:1
position: 219097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217601-219097:1:exon

TPH_RS01155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01155
old locus tag: Tph_c02240
inference: COORDINATES: protein motif:HMM:TIGR01730.1
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter periplasmic adaptor subunit
translation: MGAGEELTNGGLKGASGEDRPSREGRPPGGGPAGEGDAGERLPGLKASPAAGDAQNEGGRALEPQAAGAAGKAAECGAPENAASGDAAGGDSGDTPEPPEGGRTLLRRRLLAAGIALAVLIGIGIMGWRYVKLKQEDAPADAGPKVVPVEVAEVTTGDVVKVVKLTGNVAARTEINVIPKMPGRIRSLSVDVGDRVTKGQVLVKLDDAEVLASLRAAEAALEVAKAGARAAQANLEDAKRNLERMQQLYDAGAISLQQLEQAQLRYDQAAAGVNDAQVRQAEAAVESARLQLENTVIVSPINGVVAARFADPGELAGTSQPLLTLVDISEVQVTCNVTGEDVNSLRTGQNVPVVVAAAGQTEEERRFTGRITSLAPAADARSKLFPVRISIPNPEGRLRPGMFAEVHLTTAVSRGAVRVPVDAVLERDGKKIVYVVEGDRARERRVETGITGEEYVEIKSGLKPGEKVVVTGQDFLVDGTRVQVSSGKNGGQGKEASR
SIO_010081: TPH_RS01155
subclass of: SO_0000673
so part of: TPH_RS01155
location: 217601..219097
location: region:217601-219097:1
so has part: feature:217601-219097:1:exon

WP_015049390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217601-219097:1:exon

TPH_RS01160
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01160
old locus tag: Tph_c02250
so part of: sequence
location: 219094..222201
location: region:219094-222201:1
so has part: feature:219094-222201:1:exon
subclass of: SO_0000010

position:219094:1
position: 219094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222201:1
position: 222201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219094-222201:1:exon

TPH_RS01160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01160
old locus tag: Tph_c02250
inference: COORDINATES: protein motif:HMM:NF013069.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter permease subunit
translation: MNVPELAVRRSVTVLMIVIGVLVLGFLSLSRLSLDLLPDITYPVALVTTDYPGAGPEEIEKSVTRPLEEVLSTLNNVDTITSNSQTGSSMVILRFEWGTDMDQVTIDVREKIDMIRDYLPDGAGDPMVMKMDPNVMPVLQISLSGGRDLAELTRLAEEEIKPRLERLPGAAWVVVTGGRTREVQVLVDPVKLNSYGLSLSQVAQALSAENVGLSAGTMKQGKKELLITTSGEYEDLLQLANTPLTTPGGAVVYLKDISEIKQGYAELTQKTSLNGQPAVGVHVLKQSGANTVQVSRAVQEELTALQKELPGRIETGVVFDQADFIRTSINTVVEHALQGALLAVLVIFLFLRSFRSTVIIGLSIPISIIATFVMMYFGGLTLNILSLGGLAMGVGMIVDDSIVVLEVIYRYREAGASPWEAATAGAQEVAMAVTASTLTNVIIFLPVVFVQGIASQIFRDLALTVSFALLASLLVALTVVPVLAYRLVRVAGVEKEPRTPLGRLSFSLGRFFEGMNASYRRLLEWALGHRKAVLGGTALLFVISLGLSPVIGAEFFPYVDTGEISINVKMPRGTGLEETGRVAGQVEEICGSLPEVKTTFSSVGASSGMEFFQGASADRASIRVKLTPRRERSRSTSELVEELRGRLEGIPGAEIEVDESQAVSMGTAPISITLEGDDLEVLKAEAEKIAAIVEQVPGTSNVSTSLEEGKQEIEVRLKREEAASYGLGTAQVAQVLRTAISGQVVTTYRGEGEEIDLRLRLDPGAIQSLDDLGALTVLTPTGAQVPLREVAELNWKESPVVVSRENQTRACYITADLRGRPLGSVMEDIQNRLKGHPLPAGYRITYGGEFQEMTEAFGSLALALVLGILLVYMVMASQFESLSHPFVIMFTIPLAFIGVVAAFVLTGKTFSIPAFIGVIMLAGIVVKNGIVLVDYINTLRRRGVSRREAILRAGPIRLRPVLMTALTAIFGMVPLALGFGEGGELLSPLAVGVIGGLTVATFLTLVVVPVMYTLVEDLVEKLVPGTAARSFQQAQ
SIO_010081: TPH_RS01160
subclass of: SO_0000673
so part of: TPH_RS01160
location: 219094..222201
location: region:219094-222201:1
so has part: feature:219094-222201:1:exon

WP_015049391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219094-222201:1:exon

TPH_RS01165
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01165
old locus tag: Tph_c02260
so part of: sequence
location: 222523..223143
location: region:222523-223143:1
so has part: feature:222523-223143:1:exon
subclass of: SO_0000010

position:222523:1
position: 222523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223143:1
position: 223143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222523-223143:1:exon

TPH_RS01165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01165
old locus tag: Tph_c02260
inference: COORDINATES: protein motif:HMM:NF019958.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MAQKRRGSILEAAAAVFSEKGFHAATMEEIAARVGIGKSTLYEYFESKEDLFREVLRQGMENYLAAMRGRLKRPCTVRDVLTAVAAAHFNFIMEHRHLARIFSDEVRLPLPQMREWLRQLRERKLAMVAGLIERGVNEGEFRPVDARLAAEVFLGALGALCLPLLCGSDEVGAEDGGDDPDRLQERLIRGLEILFEGLLKSRSVPV
SIO_010081: TPH_RS01165
subclass of: SO_0000673
so part of: TPH_RS01165
location: 222523..223143
location: region:222523-223143:1
so has part: feature:222523-223143:1:exon

WP_015049392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:222523-223143:1:exon

TPH_RS01170
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01170
old locus tag: Tph_c02270
so part of: sequence
location: 223391..224962
location: region:223391-224962:1
so has part: feature:223391-224962:1:exon
subclass of: SO_0000010

position:223391:1
position: 223391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224962:1
position: 224962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223391-224962:1:exon

TPH_RS01170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01170
old locus tag: Tph_c02270
inference: COORDINATES: protein motif:HMM:NF016145.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide pyruvyl transferase family protein
translation: MLRVAVSGYYGFNNTGDEAILAALITTLRALAPGVDITVFSHCPRETRRLFGVRAVNRWNPLGVAFSLLRSDLLLSGGGGLLQDVTGVRSLCYYLAVVALAKILGKPVIYYAQGVGPIRTRFGRWLTRIISNRVDLITVRDQASRDDFLQMGVNRPPVVVTADPVLAVSPAHFGPEAGAAVLDRARGEAGEEAEGGEPPRGVRPPGKAAAPGVGAEKASLRETPEKPSLEREAAAGAGPGQTGSGETPAGGGEGVAGGEGCTPSGGNPFGGCAAASGQAGRRPDPRREPSGNGSGGAAEGKAAAGAGQPAGRVRPAGEKKRRLLGIAVRDWKDCYEYKRAIAAAADRLVREGWEVVFIPFHFPRDLQSCRETSWLMQEPNLLIRFKLSVEELFSLLGQLDLVLGMRPHALVMASVMRTPCVGITYDPKVARFLEMTGQPVAGTVEDLDGERLYEEIVRAWERRQEIAAHLEQVLVPLRQRAWETAALAMSVFYSRYPHRRGETGRNGRSQGAAERPSKGGRNR
SIO_010081: TPH_RS01170
subclass of: SO_0000673
so part of: TPH_RS01170
location: 223391..224962
location: region:223391-224962:1
so has part: feature:223391-224962:1:exon

WP_015049393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:223391-224962:1:exon

TPH_RS01175
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01175
old locus tag: Tph_c02280
so part of: sequence
location: complement(224987..226474)
location: region:224987-226474:-1
so has part: feature:224987-226474:-1:exon
subclass of: SO_0000010

position:224987:-1
position: 224987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226474:-1
position: 226474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224987-226474:-1:exon

TPH_RS01175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01175
old locus tag: Tph_c02280
inference: COORDINATES: protein motif:HMM:NF016800.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: O-antigen ligase family protein
translation: MNPPAIQDLKRIWKQSALLAFFSALAGLWRTSALYGFLLGPGYRAENARLRQTALSRVVAAPLEALTVLLQAFGERLKGSITSRLLEAAAGMSHLVLVLVAAYPIIDYYLRSHPALVGSAGIWKELLFLLGLLLVLARIAVNRGEKFHFTPLDLPLLLFFGTGVALYLFRSPEPAVALDGFRVTFEYLLWYYVAANISLNFRKQRIFVLSLVAAAFPVALYGIFQYVTGAPMPASWVDQAEAGVRTRAYSIIGSPNILGCYLVLVIPPAAALFRSCNSRRLRFLLGAALLTMLGCLVVTFSRGAWLAFLAAALLYGLLQDKRVLALILAGAILLPVVSPSVAGRLQYTFSSRYLESSARGGRLARWELAADRLIKHPVTGVGLGRFGGATADRFRMPGTFYVDNYYLKLAAETGFTGLIVFLWVLLRALRMLAGVIRDVSSDPEKRALACGIAAGLVGVLVHNGVENVFEVPMMQTLFWAILGATTQLPERVPDG
SIO_010081: TPH_RS01175
subclass of: SO_0000673
so part of: TPH_RS01175
location: complement(224987..226474)
location: region:224987-226474:-1
so has part: feature:224987-226474:-1:exon

WP_015049394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224987-226474:-1:exon

TPH_RS01180
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01180
old locus tag: Tph_c02290
so part of: sequence
location: 226682..227821
location: region:226682-227821:1
so has part: feature:226682-227821:1:exon
subclass of: SO_0000010

position:226682:1
position: 226682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227821:1
position: 227821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226682-227821:1:exon

TPH_RS01180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01180
old locus tag: Tph_c02290
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF024831.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MNEQARLSVVHIIGGGEFGGAEQHVLRLTERLGRNGCDPHVVCLFREPFYRMLREAGIPAAVVPMRHRLDWGACLRLASLLRELRPQIVHTHGVRSNLIGRLAARLAAVPVVVTTVHSVLPQDYPSPVSRLLNGFTERVTSPLTTHFIAVSGFIGDYLAAAGIPREKITVIYNGIDPALWESWACDGSFRTRFGIPPEAPLFGIVARLHPVKGHRYFLEAAREVAGRFPDARFVIVGSGFYWREVDSLIREYGLADRCIRTGFLTDAGPAYAALDCLVISSLSEGFGLTALEAAALGKPVIATRVGALPEIIEDGVTGLLVPPADPGALARAMLRLLEDPAEGRRLGAAAREVLLERFSLDRTVAQTAGLYRSLLEGRG
SIO_010081: TPH_RS01180
subclass of: SO_0000673
so part of: TPH_RS01180
location: 226682..227821
location: region:226682-227821:1
so has part: feature:226682-227821:1:exon

WP_015049395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226682-227821:1:exon

TPH_RS01185
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01185
old locus tag: Tph_c02300
so part of: sequence
location: complement(227876..228364)
location: region:227876-228364:-1
so has part: feature:227876-228364:-1:exon
subclass of: SO_0000010

position:227876:-1
position: 227876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228364:-1
position: 228364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227876-228364:-1:exon

TPH_RS01185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01185
old locus tag: Tph_c02300
inference: COORDINATES: protein motif:HMM:NF025582.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4330 domain-containing protein
translation: MRVIDDRGKLFGLINPIDLLALVLVLAVAAGIYLKVHPAGQAQEYATADVLVEAAFIHPETAKAVKVGDRLVANGSFTDARIIDVRVEPALIATTKADGTRLLTRDPFNMDLYATIRGRVALGEPDLRVAGQEVRVGKDDFYLKTQTVQLKAQVLKIDIHED
SIO_010081: TPH_RS01185
subclass of: SO_0000673
so part of: TPH_RS01185
location: complement(227876..228364)
location: region:227876-228364:-1
so has part: feature:227876-228364:-1:exon

WP_015049396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227876-228364:-1:exon

TPH_RS01190
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01190
old locus tag: Tph_c02310
so part of: sequence
location: 228562..229626
location: region:228562-229626:1
so has part: feature:228562-229626:1:exon
subclass of: SO_0000010

position:228562:1
position: 228562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229626:1
position: 229626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228562-229626:1:exon

TPH_RS01190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01190
old locus tag: Tph_c02310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009610962.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MraY family glycosyltransferase
translation: MELPSLTVAFFTALGIPLVLTPFVKRLAVLAGAVDRPGGRKVHRVSVPSWGGLGIFLGFAAASLLVVPHNHQLTGLLAGGFVVLLVGMIDDWRGISPWAKLAGQIAAASVLVAWGIRVDFVTNPLGGMIYLGSFSIPVTILWVVAITNALNLVDGLDGLAAGVAAISAGTVAVVSFGEGEPLVAAFALLLAAACLGFLPHNFHPAKIFMGDTGSMFLGFMLASLAAVGLTKSATAFSLILPILILGIPIFDMVFAIVRRILRHRPIFAADREHLHHRLLDLGLTHRQSVLVIYGVNLLLGGSAVLLTRLATDQGMLLLLIVLAGVLAAANKIGLFSVSSAVPSPASEKAPSDGA
SIO_010081: TPH_RS01190
subclass of: SO_0000673
so part of: TPH_RS01190
location: 228562..229626
location: region:228562-229626:1
so has part: feature:228562-229626:1:exon

WP_015049397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228562-229626:1:exon

TPH_RS01195
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01195
old locus tag: Tph_c02320
so part of: sequence
location: 229887..230405
location: region:229887-230405:1
so has part: feature:229887-230405:1:exon
subclass of: SO_0000010

position:229887:1
position: 229887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230405:1
position: 230405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229887-230405:1:exon

TPH_RS01195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01195
old locus tag: Tph_c02320
inference: COORDINATES: protein motif:HMM:NF019844.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SH3 domain-containing protein
translation: MKWRRYLLFALPLVVGTGLGFLLGSVVFAGGEGPGSASDPLVARSYVDERVKGYVRELEERVAALNERALKLEEELAGLQKRYESAPEQPGGGSDGGSGSSTPAPGNGVVYIKEGNSYVNLRSGPGTNHEIVGKALPGQPLTVVGREGDWYRVRLGDGKTAWIAAWLVTAPS
SIO_010081: TPH_RS01195
subclass of: SO_0000673
so part of: TPH_RS01195
location: 229887..230405
location: region:229887-230405:1
so has part: feature:229887-230405:1:exon

WP_015049398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229887-230405:1:exon

TPH_RS15005
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15005
so part of: sequence
location: 230476..230751
location: region:230476-230751:1
so has part: feature:230476-230751:1:exon
subclass of: SO_0000010

position:230476:1
position: 230476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230751:1
position: 230751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230476-230751:1:exon

TPH_RS15005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15005
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRPLRASPVRCGPRPAAASFCGLLCGPCRKPSAAGDQEAVAVGCHQQTIVPLAAAPTEERKKGLSLPAQRPDGGRYSPLTKEQQTAAESK
SIO_010081: TPH_RS15005
subclass of: SO_0000673
so part of: TPH_RS15005
location: 230476..230751
location: region:230476-230751:1
so has part: feature:230476-230751:1:exon

WP_148275809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230476-230751:1:exon

TPH_RS01200
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01200
old locus tag: Tph_c02330
so part of: sequence
location: 230980..231639
location: region:230980-231639:1
so has part: feature:230980-231639:1:exon
subclass of: SO_0000010

position:230980:1
position: 230980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231639:1
position: 231639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230980-231639:1:exon

TPH_RS01200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01200
old locus tag: Tph_c02330
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDNEQFQELVLRQLRELTEGQRALADGQNRLDARMGKVENRLEGLDARVGKVEDRLEGLENRMGKVENRLEGLDARVGKVEDRLEGLENRMGKVENRLEGLDARVGKVEGRLEGLDIRMGKVEDRIGQVETGMGDIGTRIDNLEKLQLRVETRLDGEILEKIRALFDARQVSLDYYASIKNSLARIEEGLDYLRRRTAEHDLKFLEYDRELRLLRMEKK
SIO_010081: TPH_RS01200
subclass of: SO_0000673
so part of: TPH_RS01200
location: 230980..231639
location: region:230980-231639:1
so has part: feature:230980-231639:1:exon

WP_015049399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230980-231639:1:exon

TPH_RS01205
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01205
old locus tag: Tph_c02350
so part of: sequence
location: 231810..232364
location: region:231810-232364:1
so has part: feature:231810-232364:1:exon
subclass of: SO_0000010

position:231810:1
position: 231810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232364:1
position: 232364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231810-232364:1:exon

TPH_RS01205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01205
old locus tag: Tph_c02350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011025356.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HDIG domain-containing protein
translation: MTRQEALALVKEKVHTPELVNHMLATAAIMEGLARRLGEDEEKWYLAGLLHDIDYEETKDDPDRHSLVAGEMLEELGFDGEIVHAVKAHNDHEGISRDTLLAKALYATDPLSGLITATAYVMPSRTLGEVKVKSIKKKFKDKAFARGANRDQIRTCEEFGVPLEEFFEIALKGMQGIASSLGLA
SIO_010081: TPH_RS01205
subclass of: SO_0000673
so part of: TPH_RS01205
location: 231810..232364
location: region:231810-232364:1
so has part: feature:231810-232364:1:exon

WP_015049401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231810-232364:1:exon

TPH_RS01210
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01210
old locus tag: Tph_c02360
so part of: sequence
location: 232479..235301
location: region:232479-235301:1
so has part: feature:232479-235301:1:exon
subclass of: SO_0000010

position:232479:1
position: 232479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235301:1
position: 235301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232479-235301:1:exon

TPH_RS01210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01210
old locus tag: Tph_c02360
inference: COORDINATES: protein motif:HMM:NF016800.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: O-antigen ligase family protein
translation: MPGKKQKGRSTRSKKAAGRSLQKAAQGKVVSLSEKRGRKKVVPLRSKKEREAVAAKGVRRRRPRFRIPEGLQDSIRRLAIRLRLSSGTGAAASKKAAGHQGGPARSGRGEWFSRAAASLQGVLPAESGRTLRRLCSVEGLVAVMLAVLLFYPPYFRGLFFSRELLPTHMYTAVIFALFAFYKLSRRELSFFRAPLDYAVFILLGLYFTSSAVAWNAREAAAAVLKIANYTAVYWLLASVVRSLNAVRGYLAVYFLSGAGVALLGLGAAFGTFRYKDAFVGGRIYSSLQYPNSLASFLTAVNLFGLYFQAVAVKLPSRLLLAAGNYLLFLTFLGTQSRGAYLIYPLGLIVLLAGLPGGARLRSLGCFLLQALCAVLVSGRVMACTGGGAALKGWLWVLAGAALAAGLQYLWHRLEQPRPAPAPGARRRRLRPWVLPAAGVLAVLIAAGGGYYALRHASTPAAAAARILPQSWMERVQSISLQEKNAQERLLWSRDALKIMTAGPVNALLGTGGGGWNSLYHKYQDYYYSSTEVHNHFLQVGVETGFPGLLAFLAVWFCFLLSTVAVLRGRVGEDVKGTSWAIFAAALALGIHSFLDFNLSLGAVALFLWGLFGLQRGLQRLFVPSEEAAPAGGKKLKERRTFTSSPFFQGAAVGLAAFLVFFVSLNLFLGEKYAAGATAAAKEQNAQQVVNGLERAAQCDPWKASYRMELGRIYMQAGTEQGDGRLLGLALERLREAVRLNRGDAGARVLYAGALFRAGQVEEGVRQLEEALSLAPLRQSLYEDLAQGYLSAGRYLLERPLKDSRQGEEGTSQEVGEPQGAARDYLVKAAQVPQRLKRRMAAVPEAYRRYWVKAPQLAVTPSLQLSAGEAAALLGRREEAVEYLAGAERDDRFKAEALLWRGLVLERMGRSAEGKELVGRALELKPELAEERDRLQRILPR
SIO_010081: TPH_RS01210
subclass of: SO_0000673
so part of: TPH_RS01210
location: 232479..235301
location: region:232479-235301:1
so has part: feature:232479-235301:1:exon

WP_015049402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232479-235301:1:exon

TPH_RS01215
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01215
old locus tag: Tph_c02370
so part of: sequence
location: complement(235451..236062)
location: region:235451-236062:-1
so has part: feature:235451-236062:-1:exon
subclass of: SO_0000010

position:235451:-1
position: 235451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236062:-1
position: 236062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235451-236062:-1:exon

TPH_RS01215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01215
old locus tag: Tph_c02370
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKVDFSQIWPELIGLVPVYARDGTNGTRILLEHRQAIFSDLKTKTLLAQLARTFLFDLQAARRAFGRVCGRCYAIPVAIRPGLVLLPVRARQARVKDDGTRAYIVKAKIRSIRPEYRGLRKAGTRFSFCDGSSLVVPHRWSSVREILLAADLVEKEAAGLGGYPSGGSGGPTPFRARESRPDYCYRNCPQSGLCRPPDGEED
SIO_010081: TPH_RS01215
subclass of: SO_0000673
so part of: TPH_RS01215
location: complement(235451..236062)
location: region:235451-236062:-1
so has part: feature:235451-236062:-1:exon

WP_015049403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235451-236062:-1:exon

TPH_RS14555
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS14555
old locus tag: Tph_c02380
so part of: sequence
location: complement(236311..236511)
location: region:236311-236511:-1
so has part: feature:236311-236511:-1:exon
subclass of: SO_0000010

position:236311:-1
position: 236311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236511:-1
position: 236511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236311-236511:-1:exon

TPH_RS14555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS14555
old locus tag: Tph_c02380
inference: COORDINATES: protein motif:HMM:NF024249.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YvrJ family protein
translation: MEDIWMQIGNYGFPMLVAVYLLVRVEKKLDTLTEAITRLEQVLSLYLRSSDHGVKEPTQAAAAGPR
SIO_010081: TPH_RS14555
subclass of: SO_0000673
so part of: TPH_RS14555
location: complement(236311..236511)
location: region:236311-236511:-1
so has part: feature:236311-236511:-1:exon

WP_028991184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236311-236511:-1:exon

TPH_RS01225
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01225
old locus tag: Tph_c02390
so part of: sequence
location: complement(236600..236818)
location: region:236600-236818:-1
so has part: feature:236600-236818:-1:exon
subclass of: SO_0000010

position:236600:-1
position: 236600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236818:-1
position: 236818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236600-236818:-1:exon

TPH_RS01225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01225
old locus tag: Tph_c02390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015050300.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2922 domain-containing protein
translation: MASRLEMVFITEGGGRFRISVADPRPDLTAEEVESAMNEVIAKNIFSSRTGDASAILSARIVTTETAELITP
SIO_010081: TPH_RS01225
subclass of: SO_0000673
so part of: TPH_RS01225
location: complement(236600..236818)
location: region:236600-236818:-1
so has part: feature:236600-236818:-1:exon

WP_015049405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236600-236818:-1:exon

TPH_RS01230
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01230
old locus tag: Tph_c02400
so part of: sequence
location: complement(236861..237088)
location: region:236861-237088:-1
so has part: feature:236861-237088:-1:exon
subclass of: SO_0000010

position:236861:-1
position: 236861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237088:-1
position: 237088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236861-237088:-1:exon

TPH_RS01230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01230
old locus tag: Tph_c02400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015050298.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1659 domain-containing protein
translation: MPVNAIPLTSAMEIVVRAGTDANGNPILSTRTYRSVKTTAADEDVLAVGQALAGLQANPVDSIRRVNEVVLEPAV
SIO_010081: TPH_RS01230
subclass of: SO_0000673
so part of: TPH_RS01230
location: complement(236861..237088)
location: region:236861-237088:-1
so has part: feature:236861-237088:-1:exon

WP_015049406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236861-237088:-1:exon

TPH_RS01240
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01240
old locus tag: Tph_c02410
so part of: sequence
location: complement(237770..238360)
location: region:237770-238360:-1
so has part: feature:237770-238360:-1:exon
subclass of: SO_0000010

position:237770:-1
position: 237770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238360:-1
position: 238360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237770-238360:-1:exon

TPH_RS01240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01240
old locus tag: Tph_c02410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015739463.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GerMN domain-containing protein
translation: MSLTNSRLFRKSLMAALAVALAAVLVLATGAWLRSEPQRMPVKSSEQNKPDISAQPQETLAKVTLYFGDGEAMYLVPEEREVAKETRPLEEVVIEELIKGPQNPDLTRTVPQEAKLLSVKVVDGVAYVNFSKEFQTKHWGGSAGELMTLYSITNSLAELPGIEKVQFLLEGETQEAILGHADTTQPIAPNWELIKE
SIO_010081: TPH_RS01240
subclass of: SO_0000673
so part of: TPH_RS01240
location: complement(237770..238360)
location: region:237770-238360:-1
so has part: feature:237770-238360:-1:exon

WP_015049407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237770-238360:-1:exon

TPH_RS01245
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01245
old locus tag: Tph_c02420
so part of: sequence
location: complement(238570..240144)
location: region:238570-240144:-1
so has part: feature:238570-240144:-1:exon
subclass of: SO_0000010

position:238570:-1
position: 238570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240144:-1
position: 240144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238570-240144:-1:exon

TPH_RS01245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01245
old locus tag: Tph_c02420
inference: COORDINATES: protein motif:HMM:NF014567.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MFSQTKRGKGHAGEGAHQRGRDQGTPPAGGTGAEKGERVPPAPTGRRDAPRFGIRTKLAGTYLLVIAVILVVINGVALRALEESYLHDRGVKTLANANIIALAGQETLLRHDRSTFYFVRDFGTQMEARVLVLDRKGRVAVDSFGEKWLEGQLLEHEEVTSALSGTGKTGVHRLESGERVLYAAVPIIRDESVAGAVMLVTDLKDIDEAVADTRRLLAAVSAAGGVLALLVGLMLADHFANSLNRLADAVRMIAAGHFNRRVEINSRDEIGLLARDLNEMAAKLEEADRTLRHFLADASHELKTPLSSIKVLAQSLLEAKEMDPEVCRDFLRDINGEADRMAALVDDMLHLTKLDDPDYPVTFGEERVGPLLTHIKGLLAGEAAQKGIAIHLEEEPQGISWPLNGQLFTRIFLNLLDNAVRYTQDGGRVTITAAVEGEELAVRVEDNGPGIPPEALPYIFDRFYRVDRARSRATGGTGLGLAIVRQAVRRHGGTVAVESAPGKGTAFEVRFPRTPPQRKGGFGA
SIO_010081: TPH_RS01245
subclass of: SO_0000673
so part of: TPH_RS01245
location: complement(238570..240144)
location: region:238570-240144:-1
so has part: feature:238570-240144:-1:exon

WP_015049408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238570-240144:-1:exon

TPH_RS01250
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01250
old locus tag: Tph_c02430
so part of: sequence
location: complement(240119..240820)
location: region:240119-240820:-1
so has part: feature:240119-240820:-1:exon
subclass of: SO_0000010

position:240119:-1
position: 240119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240820:-1
position: 240820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240119-240820:-1:exon

TPH_RS01250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01250
old locus tag: Tph_c02430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013780533.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MRLRVLIVEDERSLVKGLKYALEKEGYRVSAAYDGKEALEFLRHNRVDLIILDLMLPEIDGLEVCRRLRQRDNTPIIMLTARGDDVDKIVGLELGADDYLAKPFNTRELIARMRAVLRRTASSAQQPGPARGVLTFGGLEIDPGRRRVTVEGRPVELTAREFDLLLTLARRPGLTFTREMLLDQVWGEDYFGDSRVVDVYIRRVREKIEPDPARPRWIITKWGVGYVFADEEG
SIO_010081: TPH_RS01250
subclass of: SO_0000673
so part of: TPH_RS01250
location: complement(240119..240820)
location: region:240119-240820:-1
so has part: feature:240119-240820:-1:exon

WP_028991182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240119-240820:-1:exon

TPH_RS01260
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01260
old locus tag: Tph_c02440
so part of: sequence
location: 241388..241627
location: region:241388-241627:1
so has part: feature:241388-241627:1:exon
subclass of: SO_0000010

position:241388:1
position: 241388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241627:1
position: 241627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241388-241627:1:exon

TPH_RS01260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01260
old locus tag: Tph_c02440
inference: COORDINATES: protein motif:HMM:NF026048.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S binding protein
translation: MAEEKKKYKFDFEIKQDLCMDCATCWYVCNYEGGSGAVYVNYNGSAYYDIDKDTCTRCGRCYRACPVNAVERLKAADAS
SIO_010081: TPH_RS01260
subclass of: SO_0000673
so part of: TPH_RS01260
location: 241388..241627
location: region:241388-241627:1
so has part: feature:241388-241627:1:exon

WP_015049410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241388-241627:1:exon

TPH_RS01270
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01270
old locus tag: Tph_c02450
so part of: sequence
location: 241960..242751
location: region:241960-242751:1
so has part: feature:241960-242751:1:exon
subclass of: SO_0000010

position:241960:1
position: 241960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242751:1
position: 242751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241960-242751:1:exon

TPH_RS01270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01270
old locus tag: Tph_c02450
inference: COORDINATES: protein motif:HMM:NF013704.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA methyltransferase
translation: MAARSGRRTALDGKTWLRYSISIWDDVKDAEERSYRHPAMFPTSLTDRLIEIFGREEDGLVLDPFLGSGSTLCSAFKKGLPSVGFEISEEYVALAGRRLQKIAGPPDRYPRIIQKSSLQLEEYLEPESVSLCITSPPYWNVLNRKRTADGKPVRNYGSHPEDLGNVADYPAFLNALQRVFAGVYKTLIPGCYCIVIVMDVRKRSDFYPLHMDLSLKLREVGFTLDDIIIWDRRREYNNLRPLGYPTVFRVNKVHEFILIFQKR
SIO_010081: TPH_RS01270
subclass of: SO_0000673
so part of: TPH_RS01270
location: 241960..242751
location: region:241960-242751:1
so has part: feature:241960-242751:1:exon

WP_015049411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241960-242751:1:exon

TPH_RS01275
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01275
old locus tag: Tph_c02460
so part of: sequence
location: 243002..243277
location: region:243002-243277:1
so has part: feature:243002-243277:1:exon
subclass of: SO_0000010

position:243002:1
position: 243002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243277:1
position: 243277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243002-243277:1:exon

TPH_RS01275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01275
old locus tag: Tph_c02460
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNTRVLHMRFPTDVIASLEELLNDLNVSRNEFIVQAVREKISREMRLRGLKKTRGSLGPEDAPDWAGIPAAEWVRKVRREESRLPYGFSD
SIO_010081: TPH_RS01275
subclass of: SO_0000673
so part of: TPH_RS01275
location: 243002..243277
location: region:243002-243277:1
so has part: feature:243002-243277:1:exon

WP_015049412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243002-243277:1:exon

TPH_RS01280
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01280
old locus tag: Tph_c02470
so part of: sequence
location: 243261..243668
location: region:243261-243668:1
so has part: feature:243261-243668:1:exon
subclass of: SO_0000010

position:243261:1
position: 243261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243668:1
position: 243668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243261-243668:1:exon

TPH_RS01280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01280
old locus tag: Tph_c02470
inference: COORDINATES: protein motif:HMM:NF013970.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MAFLIDTCVLIDHLTGRLPSDASTWLEQVVTSGMAATSVIVYHELLFGARTEKARAAVEELLQAWSILPVDRQVARRAAEIRRDQAAQGRTLGMADCLIAATAELKGLKVVTANVEDFPSVEVVFPGGPAGGSSR
SIO_010081: TPH_RS01280
subclass of: SO_0000673
so part of: TPH_RS01280
location: 243261..243668
location: region:243261-243668:1
so has part: feature:243261-243668:1:exon

WP_015049413.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243261-243668:1:exon

TPH_RS01285
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01285
old locus tag: Tph_c02480
so part of: sequence
location: 243899..244366
location: region:243899-244366:1
so has part: feature:243899-244366:1:exon
subclass of: SO_0000010

position:243899:1
position: 243899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244366:1
position: 244366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243899-244366:1:exon

TPH_RS01285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01285
old locus tag: Tph_c02480
inference: COORDINATES: protein motif:HMM:NF014021.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase domain-containing protein
translation: MAARGGAVPTACRTAFRCASLMSGRHRTRWGYWNDDGAEKGVSAVEYLTAAEKAALAELREELRKMLGDRLVGLYLYGSKARGDYGAGSDVDVAVIVKGLTGNLKKAVFDKAADIELERDLCLSTLVLSEEQFELLKRRERRIGLDIEREGVSLL
SIO_010081: TPH_RS01285
subclass of: SO_0000673
so part of: TPH_RS01285
location: 243899..244366
location: region:243899-244366:1
so has part: feature:243899-244366:1:exon

WP_201764471.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243899-244366:1:exon

TPH_RS01290
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01290
old locus tag: Tph_c02490
so part of: sequence
location: 244392..244796
location: region:244392-244796:1
so has part: feature:244392-244796:1:exon
subclass of: SO_0000010

position:244392:1
position: 244392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244796:1
position: 244796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244392-244796:1:exon

TPH_RS01290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01290
old locus tag: Tph_c02490
inference: COORDINATES: protein motif:HMM:NF017020.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HEPN domain-containing protein
translation: MIDENKRENIREEINRANHLLDAADYLNAGGFYNDAVSRLYYYLFYHFRALLLSEDLEPKTHEGISRLIGIRFVKPGILDVKSSRVFSRLMKYREEADYNPAFSFSEDEYLELREEAVEVGDAVRGYLREKGYL
SIO_010081: TPH_RS01290
subclass of: SO_0000673
so part of: TPH_RS01290
location: 244392..244796
location: region:244392-244796:1
so has part: feature:244392-244796:1:exon

WP_015049415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244392-244796:1:exon

TPH_RS01295
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01295
old locus tag: Tph_c02500
so part of: sequence
location: complement(244934..246841)
location: region:244934-246841:-1
so has part: feature:244934-246841:-1:exon
subclass of: SO_0000010

position:244934:-1
position: 244934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246841:-1
position: 246841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244934-246841:-1:exon

TPH_RS01295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01295
old locus tag: Tph_c02500
inference: COORDINATES: protein motif:HMM:NF025910.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MKADKAEQLLIKGHEALEAGDFRAAAEAFAEALKEEDSTPPRNNLAYAVFMGGEPRRALEVIEPLLNPEGGSSQANPFTYALAARIYCSLGQEKEARRWLRKAERSFDEGLSALRHRRAGALEMRTFQEYTAIIMQAAGDLRDHRLVFDLYRRWESYHVLTENRYLAGVASFNMGRYKRAASLWGSIAHAHPLFSDMELVAFLMERDIFPPFELSYKHHSEEKLMKMVQDAAADEEARRRCVENGFFRIRTLAQIAEERDSEGSQVALYNLVYYGGEWGEKLGRKVLENSWFPLPLKMGAAHALVDRGILREDEPVPVLIDGEQRLIHFKTISVMLEPDEELDKVVQHAVELRDQGKIAEATSLLQDLLQQEKYYPPAMMTLANLLRQQDKLEEALDLMELLEETAPEDPAVLFNFAALMLQMDDPEQARAYLNRIDPDEITEEIRSKIELLEEEIEKAELRDDLLSLPERIMKFFTEDQRQEIEKKTLPADATLARGLKNMPANWLTAACKAHGLKPLRHRREREDQLVEFLTDRKNLARAVENLDAAERELLEYLLQRGGWSRLNAVTRKFGSMEGDGFYWEEKKPQSILGTLWSRALVMVGRTSVSGQRCKIATIPIELREPLGEILGNSNG
SIO_010081: TPH_RS01295
subclass of: SO_0000673
so part of: TPH_RS01295
location: complement(244934..246841)
location: region:244934-246841:-1
so has part: feature:244934-246841:-1:exon

WP_015049416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244934-246841:-1:exon

TPH_RS01300
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01300
old locus tag: Tph_c02510
so part of: sequence
location: 247087..247353
location: region:247087-247353:1
so has part: feature:247087-247353:1:exon
subclass of: SO_0000010

position:247087:1
position: 247087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247353:1
position: 247353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247087-247353:1:exon

TPH_RS01300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01300
old locus tag: Tph_c02510
inference: COORDINATES: protein motif:HMM:NF024064.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix domain-containing protein
translation: MIRKQFYVDPHHDYLLKKLARATGVSEAELVRRALEAHLNACMAAGHNLKAWEAEKAFIEDRIKMQRETAHPSAEIGRSWRRDDLYDR
SIO_010081: TPH_RS01300
subclass of: SO_0000673
so part of: TPH_RS01300
location: 247087..247353
location: region:247087-247353:1
so has part: feature:247087-247353:1:exon

WP_015049417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247087-247353:1:exon

TPH_RS15520
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15520
old locus tag: Tph_c02520
so part of: sequence
location: 247622..252553
location: region:247622-252553:1
so has part: feature:247622-252553:1:exon
subclass of: SO_0000010

position:247622:1
position: 247622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252553:1
position: 252553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247622-252553:1:exon

TPH_RS15520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15520
old locus tag: Tph_c02520
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLENCAGLEDCERVLAGQVEKVAFLGQVELSSEDVEKLGALIGERIKNDIRRGTQYLQQRAETCLVQYLVDTGIWKYKDGSYWPALAEAVGLDDVNWQVRWGSFFLQYLTRKGLQQFDLEQDEEGAWRYVTPILLHGGIPDCCLDEFFSRIVVRLIDDDRVAEDDVRDWLYSVREQEFRKRDLYKEIRELEKEKEKLSVDYGRLSRLENLVTKVGELAAAASSPGQWSELPEDCPGFLREKESELKDVQRQITDLERRREACCRRIRQFTQEDRIILELGSTVEQYAQEYQDFLKEREKLRELEAEEKACREKLNALAASFWGSPWEDGYGDLLENISWDLLAVKCEEYRALREAYRPPDEGRSQKNAEARRLPFVGCWPGIISTAAGVGLLFSPLRWAGALFLSAGVLMAAGAFIRWRREKRLEKEQREALQCRMSAAEKEMRRLEGEINRIVAGLPFPADCSWIQVPDAIDRLGSLREAFERRQDCLCQMRQVESRLAGWRQRAAEAAAAAVGALPDFGGCSIEVMLEKLSRSRQKRETAEQAERALREEIAPRLQELRDCEARIERDLCRVKARLLYLGRGSLEEGINELAVKRDVFRQVKVVIAEIEELLGLLNLPWEALPDGRIGELCRAKGAELESLCSRLKEKEKEMAGHPSSLPDLDRPIERFLLYGGEWTERWLIGAVRLAERAFRERNIPHEVEPDLPARVVDGFREWWRENHPSDPNGNTDLKPERFANPVLKLDQRQRGLVIFTDRCRFRLEDARLAPTVILKITACGQVAGDDSLQPVELPLRVYRGKEGWAETEVVEYSVPPAKEYEVALVVNGKVRRSLRIEGIKDGRPFLVFDENGKQFAGEVLPRRRFWLLLLSGYRLPFNVPVIEDATPPWQPGYCLFLVDLSDAQEFYLTDGSGVRCGYPLAEGESFEPYLSGGQTVDFVSVEGAPVYAGEPPFLVIPVDNETGWKGWSIVVRYGRGLSAERRRCLLGELPEESIRRCDGRMEVPLALPELLGPGAAGDFTVRLRASKKSEYVFRLTVVPDLLVFFEPQLLLPFSQEGEQTNVTVIIPENAALEVEQPAAIISVEDDAYEIEVPREEDVVRVTLVLDQTSQTAEEKILPMDIRVPAVRWRLLGLKGGQFREWQKRVAEVWLGDWEEAGDALYLELGFPAEEGETVQFCLDGSTHYVTGQIRNGCTRFNLLEFTDTLRSGGEPLRSFSIKVYGSRRKPICEGLLFRVLCRWIVEDVKWTVRDLGGRRQLRVEWRERGRAQNRVLRVWRLWEPWSPLLVEPIPDGAVQITVEREKAVLPPGRYLLQFAVEDPWRADEPVSFPTEGLNTVEIDISGGEPYIKDLDIRLQPEEALISGVLVNAAPGEKLIGSLCGIAGRRGEVRRTETAVAADGAFRFEFARSEGGPLPLPVEAHWLVLATEGLSFYEFSILENPAPLKFALEELTVQEVAELIEVQEGVDVRIESREGDLTCFELPAEAGSELIGAWTDGRSEVDVDLIVNQRFERVKIKRTPEETQLLLERGVKCIGCGMILPNTQAWYQHSAGLEEHPGLIINYVNVPISLYLIWDVAPLIRRYRAENYAGWRELLVLYSSRHMPLPGRIIDEGRLDCERLFGVLWEREKERARALARGLRKVER
SIO_010081: TPH_RS15520
subclass of: SO_0000673
so part of: TPH_RS15520
location: 247622..252553
location: region:247622-252553:1
so has part: feature:247622-252553:1:exon

WP_015049418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247622-252553:1:exon

TPH_RS01310
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01310
old locus tag: Tph_c02530
so part of: sequence
location: 252543..257426
location: region:252543-257426:1
so has part: feature:252543-257426:1:exon
subclass of: SO_0000010

position:252543:1
position: 252543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257426:1
position: 257426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252543-257426:1:exon

TPH_RS01310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01310
old locus tag: Tph_c02530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015311237.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MSVNPISAAAAIKESYLGYLTTTFHFRDAVIQEQFESSLRRGADFVKGPILEATPPFEKGSTVAELIKEGVLSERFAFLSTPQLPMDRPLYRHQEEAICKLIVGRRNLVVATGTGSGKTETFLIPILNHLFREEEAGRLGPGVRALLLYPMNALANDQLVRLRGLLKNYPNVTFGRYTGETEEKHAVALDQYRKAFQGQDPLPNELISREQMWENPPHILLTNYAMLEYLLLRPNDSVFFDGEYARNWRFIVIDEAHTYSGAKGIEMAMLLRRLKDRVAAGEGGLQCVATSATLGGKEEFSRIVDFAGQLFGEPFEWVEEDPGRQDVVEAVRLPVVLQSQEWGEPSPEVYEKWLDAISKVGGEEAAAELVRYGSESGVPQAVLESAASKASGPNGWRTFLYEVLQGDGRMLRLHQKLQEKPRDFGELAGEIFPSLPDADRALMALVELAAKAKVGDDETPLLPARYHFFVRAIEGAYLALKPEQRLFLARRESWKEDGGEYPVFEAAVCRRCGATYLVGELDRSNGRCYLKQTGEAGGKIAYFLKVPGEIATDALDEDDEVEFPQPVVPEDRLESYLLCASCGAVELEKAFDLPCSCGRENYQRLLRVPVTDKGNVFLCPACGGRSPDGMVRRFLVGTDAAASVLATALYRQILPKQRDDVKRMQADEDPWSSTLAVTAGEGEECGSRKLLIFSDSRQDAAFFAPYLDRTYNQILRRNIILKILKERREEAVANRWRLQDLVGPLQEAIEENDLLPGCSLQERMNEAWKWLFREFLALDRQISLEGLGLLSFNLVKPRHWCAPPGLMGDPWNLTETEVWTLFQILLNTLRMKGAVLFPEQISPRDPFFRPRNREFYFREYGASQQKGIFSWNSAAVNSRLDYLIRLASNINPEIGEEKCREVLKNIWTRSLALSKNNSCWLPYFSVDSLPREGVVYRLRYNVWEVWRALDEGQEWFICDKCQNLTPYNVRGTCVTYRCPGRLRPVRPEEIFRQHHYYRLYLDDLPPRMVPAEHTAQLTGKAATELQSKFREGTVNVLSCSTTFELGVDVGELEAVFMRNVPPSAANYIQRAGRAGRRTDSTAFALTFAQRRSHDLDHYREPWRMVSGKVQAPYFKIANEKVVRRHVYATALSAFWRRQEYRGLFGKVEKFFFRDGPTGTDLFADFLESRPAGLLRSLKRIVPGDLQESIDLDGWGWLDGLFDPKKGVLRLAEEEVISDVEQLEAVRERLYRERKRSDHLIRLIDTIKKRDLIGFLSSRNVIPKYGFPVDVVELQLLHHGEEAKRLQLERDLRIALSEYAPGGQVVAGGKLWTSRYLKRLPNREWERFRYAICDECQVFVRQRAELVGSEDLDKRFSRCPVCGQRYRNQGTYIIPAFGFIIDQKGPTAPGEEKPERTYATRVYFCGEADEEGCVELPLQNIRLKAVPAVRGRMAVINNAGATGFKVCSRCGYTVLGDERVKNPHLRPGGDECQGTLQSYLSLGHEFETDILKLTFEGYENSELGFWYSLLYALLEGMSKALDIERQDIDGCLYPAAANPAARTLVLFDDVPGGAGHVRRIANPGSLLLVLRTSLERLLNCECGGSEGDASCYGCLRHYRNQFCHDLLKRGPVISFLRDVLLQVGAAVP
SIO_010081: TPH_RS01310
subclass of: SO_0000673
so part of: TPH_RS01310
location: 252543..257426
location: region:252543-257426:1
so has part: feature:252543-257426:1:exon

WP_015049419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252543-257426:1:exon

TPH_RS01315
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01315
old locus tag: Tph_c02540
so part of: sequence
location: 257637..257981
location: region:257637-257981:1
so has part: feature:257637-257981:1:exon
subclass of: SO_0000010

position:257637:1
position: 257637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257981:1
position: 257981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257637-257981:1:exon

TPH_RS01315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01315
old locus tag: Tph_c02540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015050309.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4258 domain-containing protein
translation: MTVWIALLRKAARERNAGNLEEGYIISRHALQRMGERGIAEEDITKCGLEGKVLETQDHGRDIKVLVQGVDTDGQDFYMIVALRFPRPVIVTVCRFQDEAWEDLGPFKKRRKED
SIO_010081: TPH_RS01315
subclass of: SO_0000673
so part of: TPH_RS01315
location: 257637..257981
location: region:257637-257981:1
so has part: feature:257637-257981:1:exon

WP_015049420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257637-257981:1:exon

TPH_RS01320
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01320
old locus tag: Tph_c02550
so part of: sequence
location: 257984..258484
location: region:257984-258484:1
so has part: feature:257984-258484:1:exon
subclass of: SO_0000010

position:257984:1
position: 257984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258484:1
position: 258484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257984-258484:1:exon

TPH_RS01320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01320
old locus tag: Tph_c02550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049421.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MECYICGGEMKKNKKDVDATWKGRTITFRGMNAWVCSSCGEEAYEPDDVRLMQGLIRGTLNQPEYPEIMNVSEVAELLRVSNQTVYNLVKSGRLPATKVGREWRFSREKILQVLGGEAFKEEAITEEKQDSGVKMAARKADDNGISERDLQVIQRHLAEMGGQQGG
SIO_010081: TPH_RS01320
subclass of: SO_0000673
so part of: TPH_RS01320
location: 257984..258484
location: region:257984-258484:1
so has part: feature:257984-258484:1:exon

WP_015049421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257984-258484:1:exon

TPH_RS01325
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01325
old locus tag: Tph_c02560
so part of: sequence
location: 258484..259263
location: region:258484-259263:1
so has part: feature:258484-259263:1:exon
subclass of: SO_0000010

position:259263:1
position: 259263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258484-259263:1:exon

TPH_RS01325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01325
old locus tag: Tph_c02560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015050311.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ImmA/IrrE family metallo-endopeptidase
translation: MAVSLSPVFYARQLRHELKLTGAVDLSLVADRMNIRIFEEALDAEGYLIQKGKEARIIINNNIGYETRKCFTIAHELGHFYMPHHQESIFRCLARDIQSYCSDRKLEYEANEFAGEFLLPAQELEKRLLQPPNLDMIKEFSKIYGTSLTATAVKVVQLTCEKIAVVLSESGEIKWFRKSESFPYWINKGPLHEWTYAYDFFSAGKSLPETPQKVQAMAWCQGVSREELIFEESMAFPNLNIVMTLLYIPYEEECDAFWW
SIO_010081: TPH_RS01325
subclass of: SO_0000673
so part of: TPH_RS01325
location: 258484..259263
location: region:258484-259263:1
so has part: feature:258484-259263:1:exon

WP_236608807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258484-259263:1:exon

TPH_RS15300
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15300
so part of: sequence
location: 259501..259653
location: region:259501-259653:1
so has part: feature:259501-259653:1:exon
subclass of: SO_0000010

position:259501:1
position: 259501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259653:1
position: 259653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259501-259653:1:exon

TPH_RS15300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15300
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFADSQKFRLCILKQKTSANRQERIARGVVAIPGLPEAVIVRKGQEKSAI
SIO_010081: TPH_RS15300
subclass of: SO_0000673
so part of: TPH_RS15300
location: 259501..259653
location: region:259501-259653:1
so has part: feature:259501-259653:1:exon

WP_155990797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259501-259653:1:exon

TPH_RS01330
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01330
old locus tag: Tph_c02580
so part of: sequence
location: 259739..260527
location: region:259739-260527:1
so has part: feature:259739-260527:1:exon
subclass of: SO_0000010

position:259739:1
position: 259739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260527:1
position: 260527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259739-260527:1:exon

TPH_RS01330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01330
old locus tag: Tph_c02580
EC number: 3.1.3.48
inference: COORDINATES: protein motif:HMM:NF039343.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-protein phosphatase YwqE
translation: MIDIHTHILPGFDDGPGTLEESLEMAASFVAAGFTAVVATPHVIPGVYDNGREAILEGVAALQKELDAEKIPLKVYPGSECHVRPDLPQDLADGKLVTLGDSGRYLLVELPAQEFPPYAGEVLFRLLLNGVTPVLAHPERSAFFSGSPRSLAELVGKGVLVQVTAGSLAGLFGPQVQRTARRWLREGLVHFVASDAHGNGHRLRAAARAAGLLGADAEALLDAAPAAAVRGCGLEPLAAVRRVQGGEEKKLGFLGRLFCRRR
SIO_010081: TPH_RS01330
subclass of: SO_0000673
so part of: TPH_RS01330
location: 259739..260527
location: region:259739-260527:1
so has part: feature:259739-260527:1:exon

WP_015049424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259739-260527:1:exon

TPH_RS01335
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: tnpA
locus tag: TPH_RS01335
old locus tag: Tph_c02590
so part of: sequence
location: 260734..261135
location: region:260734-261135:1
so has part: feature:260734-261135:1:exon
subclass of: SO_0000010

position:260734:1
position: 260734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261135:1
position: 261135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260734-261135:1:exon

TPH_RS01335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: tnpA
locus tag: TPH_RS01335
old locus tag: Tph_c02590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010887312.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
translation: MEPQRGRNSVYNIAYHMVWCVKYRKPLLTGRVAEHLKSLLYQVARDNGFTIEMMEIMPDHVHLFVRATPNHLVASMVKALKGVSARFLFKEFPELKKELWGGHLWNPSYYVGTVGHISEETVKKYIESQKAGD
SIO_010081: TPH_RS01335
subclass of: SO_0000673
so part of: TPH_RS01335
location: 260734..261135
location: region:260734-261135:1
so has part: feature:260734-261135:1:exon

WP_015049425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260734-261135:1:exon

TPH_RS01340
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01340
old locus tag: Tph_c02600
so part of: sequence
location: 261137..262462
location: region:261137-262462:1
so has part: feature:261137-262462:1:exon
subclass of: SO_0000010

position:261137:1
position: 261137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262462:1
position: 262462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261137-262462:1:exon

TPH_RS01340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01340
old locus tag: Tph_c02600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015738204.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS200/IS605 family accessory protein TnpB-related protein
translation: MPHLHGFTKTLRYNLLMPTDVEEQALRTTLLYRRVVTYYLQVFQEHQEIIDHGKWLKMAEKLTHRTKDNPDPEYPFDREFLNLPSGFRRSAIAEAHGKAQAWKTSYEKWEERKRKHEERNRRRIIAGKKPIEFAERPPQYPKDNNCWLSYYGTEYKWLDSHHIMLKMFTGKSYVYRKVTLLQPFAVPPGYVAGSPVLVKKPTGWELHVPIVRVTKLNLKKIEELVKDTSLKICLVDLGMNRHAAMTIQDTEGRVYAAKLISAAKDNHLRKRYLEKIVNLQMQTGVIPEGERFAKHLWDKVSNLNDDIAHRVSRQIVDFAKIHGAKIIVFEHLDGLRPSKGTKSHRLNQKFILWVKGRIFRYTRYKALHEGIVTCRVSPKETSSRCPYCGFPTIVRYNKGKNGEETKGVDLAKCTNCGVRDINSDFIGSLGIGRNFRLKYCP
SIO_010081: TPH_RS01340
subclass of: SO_0000673
so part of: TPH_RS01340
location: 261137..262462
location: region:261137-262462:1
so has part: feature:261137-262462:1:exon

WP_015049426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261137-262462:1:exon

TPH_RS01345
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01345
old locus tag: Tph_c02610
so part of: sequence
location: complement(262556..263086)
location: region:262556-263086:-1
so has part: feature:262556-263086:-1:exon
subclass of: SO_0000010

position:262556:-1
position: 262556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263086:-1
position: 263086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262556-263086:-1:exon

TPH_RS01345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01345
old locus tag: Tph_c02610
inference: COORDINATES: protein motif:HMM:NF037100.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase domain-containing protein
translation: MLKKRHYLAQEKKGEILAKIRNLLQAQPEISFAYVHGSFLEQETFGDIDLAVYLSPVPAGSGIYYELALESALEELIGYPVDLRILNEAPLSFKYSVLRNGTRIFEKDEGLRVAFEPLPTEVGRFRVLLPGTSRLPRVRGRGSPWAVGPTPYRHGLGTRTGIRRILPGASSQRVRA
SIO_010081: TPH_RS01345
subclass of: SO_0000673
so part of: TPH_RS01345
location: complement(262556..263086)
location: region:262556-263086:-1
so has part: feature:262556-263086:-1:exon

WP_015049427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:262556-263086:-1:exon

TPH_RS01350
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01350
old locus tag: Tph_c02620
so part of: sequence
location: 263284..264960
location: region:263284-264960:1
so has part: feature:263284-264960:1:exon
subclass of: SO_0000010

position:263284:1
position: 263284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264960:1
position: 264960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263284-264960:1:exon

TPH_RS01350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01350
old locus tag: Tph_c02620
inference: COORDINATES: protein motif:HMM:NF012613.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S-layer homology domain-containing protein
translation: MSKLYTNRPLLGNIGLVVFLAFLVTLTFGTVPQAQAADQTTDGKTVHVDKSSTSSDGTVEFTITITSPTDFDDSLLELFLRKSDGTEITSTSVYVYESAYEVSKQVYQFVYDWVYKFNTADLPMNVTFVVYLNEVELPSITLTVEPPPPESVGGGGPAVPPTTTVSTGTVAVEDGVGTLTVDASKVARLLDDPQLKEIEFAIPADLAVVGDVVMPAAVLADVFEAGKAAVFEVGGVRLVIEPGDLDVKDVQLLAEEGATVAVSVVKATAPVQYGLKVASDVYEIKMEVTGADGLKKGEIASFSKPITLTLPYSTDRLQGMSEDLLSIFRYGEKTGKWDLVPGSRVDKVNKTVSVGSYSLSKYAVMAYEAAFTDVAGHWAEETIKLMAAKGIIKGMTATTFAPEAEVTRAQFATMLVNALNIRQQAATGTRFSDVPATAWFANTVETAAANGLLNGYPDGSFKPNAKITRQELAVMVANALKFRGRDAAELTAEEVNAILSGYSDRGQIGSWAKRAAAVVVKSGIVKGRAVDQFAPLATAKRCEAVVMIKQMLSFLGEL
SIO_010081: TPH_RS01350
subclass of: SO_0000673
so part of: TPH_RS01350
location: 263284..264960
location: region:263284-264960:1
so has part: feature:263284-264960:1:exon

WP_236608843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:263284-264960:1:exon

TPH_RS15305
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15305
so part of: sequence
location: 265229..265375
location: region:265229-265375:1
so has part: feature:265229-265375:1:exon
subclass of: SO_0000010

position:265229:1
position: 265229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265375:1
position: 265375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265229-265375:1:exon

TPH_RS15305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15305
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKNIRRILEDHGEGYNFIKVGEERARRRRCSMTASPAAAVGCRSTKV
SIO_010081: TPH_RS15305
subclass of: SO_0000673
so part of: TPH_RS15305
location: 265229..265375
location: region:265229-265375:1
so has part: feature:265229-265375:1:exon

WP_155990796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265229-265375:1:exon

TPH_RS01360
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01360
old locus tag: Tph_c02630
so part of: sequence
location: 265411..267897
location: region:265411-267897:1
so has part: feature:265411-267897:1:exon
subclass of: SO_0000010

position:265411:1
position: 265411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267897:1
position: 267897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265411-267897:1:exon

TPH_RS01360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01360
old locus tag: Tph_c02630
inference: COORDINATES: protein motif:HMM:NF016800.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: O-antigen ligase family protein
translation: MRKQQEARNLKKTKSLRGASKKKEQMLFGLNVDLRPFFLFGLFLILFFSPFMRGLFFPPEFLTACILVGSTFIICVFDQVLRREIFVPRLALDWAVLAFVFAWALSLIGAVHVVSALRELMEAAACAFLYVCAARAARNEKSFDLLLLICYLAGIGVALIGILAAAGIFPFPGAYDGGRIMSTFQYPNALAVYLVLLNCVGLALSVKSENLLAKSFYACGNFLMILVILGTQSRGGWVVYPLAVGGLIAMLPSAYRWRAAYHLVIPLGCALFAGRGFFGLLRAGENLAAVKYAVYGGIAALVLQAAYHLLAQWLNRDEVSDATRRLAAAGGVGYLVLVIAFYVYASAGALPITAATVAPVEVVRRAEQISAAEENFRNRLEFSRDALRIVRDYPLVGVGGGGWNALYHKYQSSLYWTTETHNHFFQTWVEAGTIGLLALLSLWAGFTALTVRYLRRREGGGLRISVAGAFTGMLALGLHSAFDFDLSLPALSFLLFTLFGAVRGAAAGAFEAPSEEKAAAAAGGPAGGDGTAPTGSGSGLKGLLRRLQRLSPQGTAGPPWLIGAAVVGLAAGLALIIPARNFYAAGTVGAVGARALLNKDLETAERCYAEAHRLDPFTASYAADLAQIYAAQSLAGDDAIKHYRAIDLARKAARAEPYNARVRAVLVNVYLQLGEPLLAAREAEGLLEANPMLASSYELVVAARLEAARYYLRYGKGDLARPLLRPVDDLVEEMENKGIEVTPRFRLYQGALAAVAGRLTEALAHLEEAAQERDTEFEAKAWLAAALDAAGDSHKSGELASNLREKSPQFHELYEALRKESSSWPSSR
SIO_010081: TPH_RS01360
subclass of: SO_0000673
so part of: TPH_RS01360
location: 265411..267897
location: region:265411-267897:1
so has part: feature:265411-267897:1:exon

WP_015049429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265411-267897:1:exon

TPH_RS01365
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01365
old locus tag: Tph_c02640
so part of: sequence
location: 267879..269216
location: region:267879-269216:1
so has part: feature:267879-269216:1:exon
subclass of: SO_0000010

position:267879:1
position: 267879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269216:1
position: 269216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267879-269216:1:exon

TPH_RS01365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01365
old locus tag: Tph_c02640
inference: COORDINATES: protein motif:HMM:NF014732.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Wzz/FepE/Etk N-terminal domain-containing protein
translation: MAEQPVVQMEEEFIDLRSIFKVIGKWRKVIIGGTLLAVLTAALLSFFVLPPVYEAKALLLVTLATDKQQTAQQSGEGVEGVVEPLTRIPVLTINTYLGQLQSEELMRRVIGRLKLDPAVYTPKSLAQMVNASVQKDSNLIELTVQNSDPRLAADIANAVCKEFLELLSQKNQEQMGRSVELLQKQRQETEKELEKAIQNLKKFQSQPRGVAVLEEEFKLMASNLANYKSQMDSLNVEIRQLQAGIGVLEGELAKTPPMIEVQRLDPVTGKVLEGKDSNPVYVDLSEKLAEKKSTLAEKEAQLAAMGSLTSGLTAEIDKLNAELTEKKAQQDKLQSEVDRLKETLKNLAGKITESQIAKSLDIGRTTVVVVSDAATPTQPVKPRKALNMAVAGVLGLMLFTGLAFLLEHIDYTIKTPEDVAQHLELPVIGTIPLATRKTTESSYGS
SIO_010081: TPH_RS01365
subclass of: SO_0000673
so part of: TPH_RS01365
location: 267879..269216
location: region:267879-269216:1
so has part: feature:267879-269216:1:exon

WP_015049430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:267879-269216:1:exon

TPH_RS01370
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01370
old locus tag: Tph_c02650
so part of: sequence
location: 269254..269979
location: region:269254-269979:1
so has part: feature:269254-269979:1:exon
subclass of: SO_0000010

position:269254:1
position: 269254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269979:1
position: 269979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269254-269979:1:exon

TPH_RS01370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01370
old locus tag: Tph_c02650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006570180.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CpsD/CapB family tyrosine-protein kinase
translation: MKKGFKEFNNGFSPGLITVDYPRSAVSEAYRTMRTNLSFASIDQECRLLLVTSVAPSEGKTTTAVNLAVTLVQAGSSVLLVDCDLRKPGVHKILGLENGGGLTNVLVQGRSPSELFHEGPVEGLRVLTSGPIPPNPAELLGSERTKQLWPQLLEEFDYVLLDSPPVLAVTDSVLLASQVDGVLLVISAGMQRVDVAQEAKEQLLKANARILGVVLNKVKIPARDYHYYYYYHSREEGKIRL
SIO_010081: TPH_RS01370
subclass of: SO_0000673
so part of: TPH_RS01370
location: 269254..269979
location: region:269254-269979:1
so has part: feature:269254-269979:1:exon

WP_015049431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269254-269979:1:exon

TPH_RS01375
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01375
old locus tag: Tph_c02660
so part of: sequence
location: 270421..271299
location: region:270421-271299:1
so has part: feature:270421-271299:1:exon
subclass of: SO_0000010

position:270421:1
position: 270421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271299:1
position: 271299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270421-271299:1:exon

TPH_RS01375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01375
old locus tag: Tph_c02660
inference: COORDINATES: protein motif:HMM:NF017206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)H-binding protein
translation: MLFITGVTGLTGRFLIDCLREAGYRGPIRCLVREHSDVSWIRDKDNTELYLGDVSNVKSLKVGLKGIEGVIHLVNIRFSPQIIEACHSANVKRVIIVSTTGIYSKYRECSEEYKSLEKIIIESGLDYTIIRPTMIYGNQRDKNIHRLIMIIDKFPVIPVVGDGTGLMQPIYARDLARAIAEAYVRPVSIGKAYNVAGKNPIKYIEILKLIADKLRKRRLFVKIPYSISLLAGYIGSLLNSKLIDVEKVKRVREDKVFDYSDAVRDLDFSPISFEEGIQLEINALREVGLIRA
SIO_010081: TPH_RS01375
subclass of: SO_0000673
so part of: TPH_RS01375
location: 270421..271299
location: region:270421-271299:1
so has part: feature:270421-271299:1:exon

WP_015049432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270421-271299:1:exon

TPH_RS01380
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01380
old locus tag: Tph_c02670
so part of: sequence
location: 271323..272366
location: region:271323-272366:1
so has part: feature:271323-272366:1:exon
subclass of: SO_0000010

position:271323:1
position: 271323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272366:1
position: 272366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271323-272366:1:exon

TPH_RS01380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01380
old locus tag: Tph_c02670
inference: COORDINATES: protein motif:HMM:NF013146.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 4 protein
translation: MSVWILIVIILVFLLSFIVTGRVRKYALDKEILDIPNDRSSHDRPTPLGGGLAVAILFITVIAILALSGFVSLPLAAALCCGGLLVAGIGWIDDCFNVRPSLRALVHLVAAVWSLYWLGGLNTLNLGIIKCSMGAAGSVLAVVGTVWLINLYNFMDGIDGIAGSEAFVVGFIGGSLELAFGRPDLAVISWLLASASAGFLLWNWPPAKIFMGDIGSGFIGFVFAVLAIASEKSGALPLLVWLMLLGVFIVDATATLLRRIVRGERWTEAHRTHAYQLAVQAGYSHKQVTIAVIIVNMILGCAAAIAALWPKFILLISVLVALALIVLRAEVIRRCTHDQSSSLSVNI
SIO_010081: TPH_RS01380
subclass of: SO_0000673
so part of: TPH_RS01380
location: 271323..272366
location: region:271323-272366:1
so has part: feature:271323-272366:1:exon

WP_015049433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271323-272366:1:exon

TPH_RS01385
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01385
old locus tag: Tph_c02680
so part of: sequence
location: 272456..274432
location: region:272456-274432:1
so has part: feature:272456-274432:1:exon
subclass of: SO_0000010

position:272456:1
position: 272456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274432:1
position: 274432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272456-274432:1:exon

TPH_RS01385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01385
old locus tag: Tph_c02680
inference: COORDINATES: protein motif:HMM:NF014740.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside-diphosphate sugar epimerase/dehydratase
translation: MKILLTVIDVLTVNLAYCGALFLRFDGAVPAEYASAYLYLAPAATLLTLLAYQYAGLYRKMWQYASVREIYDILEGVTIGGLLVVAFAYVFVYQQGAVHPLPRSVYLIAWLLNLLLTGGSRFCLRSFREFRGNSGADGNEQAEAAPQLRRRALIVGAGDAGAMVVRELQNHPSLGLDPVGFIDDNPHKHGLYLLGLPVLGRREDIPGVAGKYDVDEIIIAIPSAPGRVIREIVDICKKTGARLKTLPGVYELIDGRVSVSQIRDVQVEDLLGREPVQLNLDEIAAYLTGKVILVTGAGGSIGSELCRQIARFNPASLILLDNAENNLFEIEQEIRERFPGLNAPAQLADIRDRELIELIFEEYRPQVVFHAAAYKHVPMMERFPEHAVSNNVYGTYNVASAAERYGAEIFILVSTDKAVRPTSVMGASKRVAELLIQHFDGRSKARGGKTRYAAVRFGNVLGSRGSVVPIFKRQIARGGPVTVTHPEMVRYFMTIPEAVQLIIQAGALAQGGEIFVLDMGEPVRIVDLASDLIRLSGLEPGEDIEIRFTGIRPGEKLKEELFTDREKMSATKHSRILIARNGDGEGAEREVASLADKLDGGRIEEFRMEALALIERLLHARPRRSGGTGVTGAQESQKAEDAAPASRLRQDKKSPTRI
SIO_010081: TPH_RS01385
subclass of: SO_0000673
so part of: TPH_RS01385
location: 272456..274432
location: region:272456-274432:1
so has part: feature:272456-274432:1:exon

WP_201764472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:272456-274432:1:exon

TPH_RS01390
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01390
old locus tag: Tph_c02690
so part of: sequence
location: 274530..275888
location: region:274530-275888:1
so has part: feature:274530-275888:1:exon
subclass of: SO_0000010

position:274530:1
position: 274530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275888:1
position: 275888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274530-275888:1:exon

TPH_RS01390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01390
old locus tag: Tph_c02690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009610122.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-glucose/GDP-mannose dehydrogenase family protein
translation: MKVAVIGCGYVGLTTGAALAYLGHEVIGVDKDESKLDLLMKRESPIHEQGLGELLKDDDCGITFTADTAGAVADAEVIMIAVGTPQKENGEANTYYVEEAAREVAAGLKDGRSYTLVIKSTVPIGTNRRVAHVVRRALAERGIEVWVNFASNPEFLREGMALRDTFYPDRIVVGAESPEAVEALRRLYRPFLEQTFEPPIFLPRPEGYGLPPLITTDPTSAEMIKYASNAFLAVKISFINEIAGLCDKVGADVTEVARGMGLDPRIGSRFLGAGLGWGGSCFPKDTAALLAVGTEYGYTMPIVQAARDVNARQRLLILEKLQAALKVLRGRTIGVLGLSFKPNTDDVRESPALDVIRLLSERGAHVQAHDPVAVPRAVEALKGLEVEFKESPYEAAAGADALILATEWDEYRYLDLKELARRMRNPVLVDGRNIYRREEAEDAGLTYMGVGR
SIO_010081: TPH_RS01390
subclass of: SO_0000673
so part of: TPH_RS01390
location: 274530..275888
location: region:274530-275888:1
so has part: feature:274530-275888:1:exon

WP_015049435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274530-275888:1:exon

TPH_RS01395
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01395
old locus tag: Tph_c02700
so part of: sequence
location: 275885..276835
location: region:275885-276835:1
so has part: feature:275885-276835:1:exon
subclass of: SO_0000010

position:275885:1
position: 275885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276835:1
position: 276835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275885-276835:1:exon

TPH_RS01395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01395
old locus tag: Tph_c02700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009610136.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent epimerase/dehydratase family protein
translation: MKSALVTGGAGFIGSHLVDRLLAEGWQVTVVDNFDPFYDPEIKRKNIAPHFDYGSYKLVEVDIRDLGALREQLTGEYDVIVHLAAKAGVRPSIRDPIGYQDVNVRGTQNLLELAKEWGVKQFVFASSSSVYGVNPHVPWREDDCVLMPISPYAATKVAGELLGHVYSHLYGIRFIALRFFTVYGPRQRPDLAIHKFARLMLKREPIPVYGDGTSRRDYTYIDDIIQGVRAAMDYTKTQYEVINLGNNRTVSLMELIRALEEVLGVEAKLEYLPPQPGDVPLTLADMDKAGKLLCYTPVTNLFKGLFEFKKWITNVN
SIO_010081: TPH_RS01395
subclass of: SO_0000673
so part of: TPH_RS01395
location: 275885..276835
location: region:275885-276835:1
so has part: feature:275885-276835:1:exon

WP_015049436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275885-276835:1:exon

TPH_RS01400
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01400
old locus tag: Tph_c02710
so part of: sequence
location: 276825..278261
location: region:276825-278261:1
so has part: feature:276825-278261:1:exon
subclass of: SO_0000010

position:276825:1
position: 276825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278261:1
position: 278261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276825-278261:1:exon

TPH_RS01400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01400
old locus tag: Tph_c02710
inference: COORDINATES: protein motif:HMM:NF024832.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oligosaccharide flippase family protein
translation: MLIKNTLLYLVARGVPGIINFLAIAIYTRLLSPEEFGKYTLVIAWVSLCNVVLFQWLRQGLFRFLPAHLNKNRPSLLTTILTAFIGLSLFVGIINFILIIFLPENGLRILLAVGFILLISEAWHELNLTFLSTKLEPLRYGIMSLSKAVIALLVGWYLASKGYGAFGLLYGLIIGLLIPTINNIYREWRKINFTFFDRSIIQNILSYGLPLTATFALNFIVSSSDRIMLGWLVSTEAAGLYAAGYDLANQTLVMLMMVVNLAAYPLALWSLEQKGYNVAQIQLKKNGILLLAVAMPAAAGLVILAPNIAGVMLGESFRKTAAEIIPLISLGALCMGLKAYYFDLCFQLGRRTQGQMFVSLASAILNLILNLWWIPLIGIYGAAYATICSYLLGLILSIKIGRKIFYMPFPGTDVFKLFLATAGMSIVLWPMADWRGTGALIAQILAGVIIYGLLFLITNVMDSRKRVLKAIKIANRLN
SIO_010081: TPH_RS01400
subclass of: SO_0000673
so part of: TPH_RS01400
location: 276825..278261
location: region:276825-278261:1
so has part: feature:276825-278261:1:exon

WP_015049437.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276825-278261:1:exon

TPH_RS01405
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01405
old locus tag: Tph_c02720
so part of: sequence
location: 278276..279775
location: region:278276-279775:1
so has part: feature:278276-279775:1:exon
subclass of: SO_0000010

position:278276:1
position: 278276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279775:1
position: 279775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278276-279775:1:exon

TPH_RS01405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01405
old locus tag: Tph_c02720
inference: COORDINATES: protein motif:HMM:NF012936.2
GO function: GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006529 - asparagine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: asparagine synthase-related protein
translation: MISPEKWLETYDHAGHFCPYYCYNNINDLHVHIGEALGMFPVGERWIDPVAIVEYLAKTYILADRTMVQNISRTPWMARPRGEGWDYAGVPEHGFHRMPAAEIARELKMRLLDEVINYLHGKKQIGILLSGSMDSRILAGIVKELQLRGEWNGQVTAFTWGVKGSRDVEYAQKIAGTFSWEWVHLELTPEVLYNNFFIAAEMGAEFAPHHLHAMQKVIDYKEELDVVLAATYGDSIGRGEFSGTHLIDCQPTLEGRSFYLIKRRDFWLVSSKVYKDVENKVVEDAYGYKNLLNVDNQKHNCVEIELMMHYLRRKLMPAMSYIGMHIPLYQIFTHPRVFGFMWSLDPQIRNDEIYSELLKILPGNLSSIPWARTGKTFGSNEGERDSSSKEHHKYGIWLRHDLHDFIESHVLSETILGLNIFNEKLLKNLVRIWPKAKTISTNKIDEILSWLTSLCIFIRKYNIRSPYGINMQEIKDTLGFLCGSITAWLYQEARERLRE
SIO_010081: TPH_RS01405
subclass of: SO_0000673
so part of: TPH_RS01405
location: 278276..279775
location: region:278276-279775:1
so has part: feature:278276-279775:1:exon

WP_015049438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278276-279775:1:exon

TPH_RS01410
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01410
old locus tag: Tph_c02730
so part of: sequence
location: 279809..280924
location: region:279809-280924:1
so has part: feature:279809-280924:1:exon
subclass of: SO_0000010

position:279809:1
position: 279809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280924:1
position: 280924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279809-280924:1:exon

TPH_RS01410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01410
old locus tag: Tph_c02730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009610146.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MQEKIALFVPSLRGGGAERVMVNLARGFAERGISVELVLAKVEGPYLSKVPKDVRIVDLKACRVLYALPGLVRYLKREKPLAMLSTLNHANIIALWAKRLARVSTRIVVREASTIRLSSANAPTVKGRFMPLLMRLFYSWADAVVAISKGVAEDLIQITKLPKEKVKVIYNPVITNEIFEKAEEPVEHPWFAQGEPPVILGVGRLTEQKDFATLIRAFHLVRKECNAKLVILGEGEKRAELEKLVEGLGLKEDVDMPGFVKNPFKYMKRATVFVFSSKWEGFGNVLVEAMAVGTPVVSTDCPSGPAEILEGGEYGYLVPLGDINAMARAILSIIKEKKIDTGFQQHALKFTVDKIVECYLEVLYVQNKQKK
SIO_010081: TPH_RS01410
subclass of: SO_0000673
so part of: TPH_RS01410
location: 279809..280924
location: region:279809-280924:1
so has part: feature:279809-280924:1:exon

WP_015049439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279809-280924:1:exon

TPH_RS15010
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15010
old locus tag: Tph_c02750
so part of: sequence
location: 281129..281722
location: region:281129-281722:1
so has part: feature:281129-281722:1:exon
subclass of: SO_0000010

position:281129:1
position: 281129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281722:1
position: 281722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281129-281722:1:exon

TPH_RS15010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15010
old locus tag: Tph_c02750
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVFFIFLSMASALWGTNQTLILKRTLLIFVPAICLYLLVIRDKNPVDTFWKISKGLTYFGCFVSVIGILLYIFGSNVFTDYGRMQIIKIAGLQIQQSVVGIPPILRISSLSGNPNNLASWLMITLTLTTAQRIAGYISQSKLFFLGGLQATALLLTFSRAGIGTTIIIIALLYLLSARNKMEVIKRTILLILLLSVI
SIO_010081: TPH_RS15010
subclass of: SO_0000673
so part of: TPH_RS15010
location: 281129..281722
location: region:281129-281722:1
so has part: feature:281129-281722:1:exon

WP_015049441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281129-281722:1:exon

TPH_RS01415
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01415
old locus tag: Tph_c02760
so part of: sequence
location: 281861..283519
location: region:281861-283519:1
so has part: feature:281861-283519:1:exon
subclass of: SO_0000010

position:281861:1
position: 281861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283519:1
position: 283519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281861-283519:1:exon

TPH_RS01415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01415
old locus tag: Tph_c02760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049341.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MFRENKSHLQTELFNTTTLMHPRTIAQLKKSWAPIYYEHVFCRIDEKKFAHLYCENNGSPNKPVNILLSLEFIKHLYDYTDEQLLEQYYFNYQIAYALGQRNLGELYICERTLYDFRRRLYEYTIQHPEEEDLIFQQFQGLLEHFLAITKIKTNEQRMDSTAIMPNIKRAGRLSLAFDVLKKGVAACPQELLPEKLQKVLEPAFKTEVLYRSRSQDVQARLEKIVELQEELLALTSNLPEIQAKPEIKLVQRFIDEQTTYDPEQKKRIVKENKDIRPDSLQSAYDQDATFRKKGNKEQVGYVCNLTETCSEENDVQFITDYVLEKNTKADVEMAAERLPKIKERTGVTDLYTDGGYYGEDLHRKAEAELNVKMHYTNLTGRQPEADKIPLTAFKIENRQKVLACPQQQTPTHTFYDEAKRRITAWFDPQICRECPLHEQCPVKIQKKKALLQFNQSALLAAETRQELADSQCRRENTSKRAAIEGTVSAIKRGHGAQKLTVRGQIKSALVMGFKCIAHNFQQLKNWFHIKRKEAREISVKPKISLPGVGVPV
SIO_010081: TPH_RS01415
subclass of: SO_0000673
so part of: TPH_RS01415
location: 281861..283519
location: region:281861-283519:1
so has part: feature:281861-283519:1:exon

WP_015049442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281861-283519:1:exon

TPH_RS14560
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS14560
so part of: sequence
location: 283570..284244
location: region:283570-284244:1
so has part: feature:283570-284244:1:exon
subclass of: SO_0000010

position:283570:1
position: 283570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284244:1
position: 284244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283570-284244:1:exon

TPH_RS14560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS14560
inference: COORDINATES: protein motif:HMM:NF016800.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: O-antigen ligase family protein
translation: MRYITYKIPFFVVKELLCTCMGWLFWGFCTRIVIFITLGHLTKVSPVLENRLTVGLNERGPAWILLYNAFLQKPLFGTGFGVSYEEILEEPGLTITSHNLFLAIISEIGLLGFLPFILIWLIGIYSAYLIVRKSFKTNNLFIENVVIGNTIIAILLGFIAHQVFEVKLLRYGFMTNLWVYLTGVALNPFLSGVRKNIENRISERVTYHRPCLRGSRNTISKPGY
SIO_010081: TPH_RS14560
subclass of: SO_0000673
so part of: TPH_RS14560
location: 283570..284244
location: region:283570-284244:1
so has part: feature:283570-284244:1:exon

WP_081578559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283570-284244:1:exon

TPH_RS01420
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01420
old locus tag: Tph_c02780
so part of: sequence
location: 284159..285301
location: region:284159-285301:1
so has part: feature:284159-285301:1:exon
subclass of: SO_0000010

position:284159:1
position: 284159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285301:1
position: 285301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284159-285301:1:exon

TPH_RS01420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01420
old locus tag: Tph_c02780
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003868352.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MKIEFRNVLLTTGLAYGGAETQLVSLATRLKKRGWDVRVVSMLPPQAFMEELTAAGIPLATLNMRRGVPDPRAIFKLVKILRQWQPAILTSFMFHANLLGRIAGRIAGVPVIISSIRNENFGGPRRDKILRYTDWMGNISTTNSRLAAESLIKRGVVPADKMQVIPNGLVLDRFYIDLKERIKLRQQLGISYNEFLWLAVGRLEEQKDYPTLLDAFRILILKNVRVQLRIAGQGPLLEVLKRQAVDSGLSDRIVFLGLRRDIPSLLNAADGFVLSSAWEGLPNVVMEAMAACKPVVATNVGGVPELVEDGVSGYIVPPHDPEALAAAMLKIMSLSEDERRAMGRAGRAHIEAKYSLDQVVDRWEKLYQDLLRNKGVSRSR
SIO_010081: TPH_RS01420
subclass of: SO_0000673
so part of: TPH_RS01420
location: 284159..285301
location: region:284159-285301:1
so has part: feature:284159-285301:1:exon

WP_015049444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284159-285301:1:exon

TPH_RS01425
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01425
old locus tag: Tph_c02800
so part of: sequence
location: 285401..287332
location: region:285401-287332:1
so has part: feature:285401-287332:1:exon
subclass of: SO_0000010

position:285401:1
position: 285401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287332:1
position: 287332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285401-287332:1:exon

TPH_RS01425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01425
old locus tag: Tph_c02800
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLIERYYLERALLFRVPGIAKINSVGEKPYSITVFIGDKNGEILPEVLEIAERVAEEIRPVTSLVAVKPYRDGPGDAVPPAALPEEIKRAAVFTPPTKSDLEYLLKRALDGCIFAEAVTVRGGEIAVYVGGEDGSASADMLEKAEQLLKIIYGNAVKYEICDYRDYSASAGANRSPTPFFIDFRFDPQRYGDGSLLKLAKNDEERYCDLLPKLIDGEADPEKELGCRFVKKGAALVDLGASEGVLEALLTIFSSVYLYLPQDGERFSGSRAATLPFSIKDKTFIRLVNAGRIIPVFHAPLHQYSLNTVIELIEASKGRAVLPRQLDGLTVLTMARQFPFWKTIRRNPGAAAEIYHLLNYQMHDFGDDDFGALVLRSLKQVFENHLLVAERGEQWFLDVGRVAAGTLTAGGLVASFLDDFAQTVDKEVLDTVMIETHGHAVNLTAARALGAVYSPALVINEKILNMVAHLQAGPRRQVSAVSVNQFDEVIKGLHVVRPEHVPLEEYLDVLNSSEAERVRRVVFDVIYRAQGDPQKVKEEVDRLNREVLKWRRSMIGKAADRVIDVIDIVGLVLDKVPIPLGAFGEPVLSFFGMAINALFGDKIKETVDAAVFAALEDRVFAALGGVSPAAVRLSKVRSKIGSKY
SIO_010081: TPH_RS01425
subclass of: SO_0000673
so part of: TPH_RS01425
location: 285401..287332
location: region:285401-287332:1
so has part: feature:285401-287332:1:exon

WP_015049446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285401-287332:1:exon

TPH_RS01430
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01430
old locus tag: Tph_c02810
so part of: sequence
location: 287354..288481
location: region:287354-288481:1
so has part: feature:287354-288481:1:exon
subclass of: SO_0000010

position:287354:1
position: 287354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288481:1
position: 288481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287354-288481:1:exon

TPH_RS01430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01430
old locus tag: Tph_c02810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011392196.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 4 protein
translation: MTQRRVLFLATVYTHLAAFHVPFMKMLQGWGCEVHAAASSAEGHKERVEEAGVICWEIPFARSPYSPANLDAYRCLKALLREHRFDLIHVHTPVAAFLGRYLAKKTGQGPVLYTAHGFHFYKGAPWKNWLIYYTAERLAAVWTDGLIVMNGEDYENARRMGFEPDKNLFYVHGVGVDLRSFEAPPAAYGIRRELGIEASDVVVSCVAEMIPRKNHDFLLEAWKGVAAGCFRCHLLLVGTGKLKSHLEEKVKREQIPRVHFLGFRRNVPEILRESNIITLTSKHEGLPRCVMEAMAAGKPVVVTDVRGSRDLVEDGRTGFLVRLGDAAGLAAALERLARDPELRTSMGAAGREKIREYSLERVLAEMAEVYGRYLR
SIO_010081: TPH_RS01430
subclass of: SO_0000673
so part of: TPH_RS01430
location: 287354..288481
location: region:287354-288481:1
so has part: feature:287354-288481:1:exon

WP_015049447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287354-288481:1:exon

TPH_RS01435
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01435
old locus tag: Tph_c02820
so part of: sequence
location: 288730..290040
location: region:288730-290040:1
so has part: feature:288730-290040:1:exon
subclass of: SO_0000010

position:288730:1
position: 288730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290040:1
position: 290040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288730-290040:1:exon

TPH_RS01435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01435
old locus tag: Tph_c02820
inference: COORDINATES: protein motif:HMM:NF014069.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MKYYEIRDPILGFIAVNEWEREIIDHWAFQRLRRIKQLAWTDMVYPGATHSRFEHSLGVMHIATQMFDSIVNKNAEFLKSELNFTEAGFQRDRVLVRLAGLLHDIGHPPFSHAGEELMPINPATGKAYKHEAYSEAVIRYLFKDVIENHPLNQNYHIKADDIADFLAGKPSTGRSLLWRSLITGQLDADRADYLLRDSHHIGVEYGKYDLKRLLVTLTVAFDENGEPVLGVEEGGWHAAEGLILARYMMFTQVYFQHTRRAYDYHLVQLMKDLLKSNAEGSDAQEGIFPPPTSVDNVTCYLKWDDWRVYGLLQSGLGGPHAELIRKRKHHRSVFQTTEVPTVEDLSLLEEICSELGELVCFVDEAENSWYKFGREDIYVLPEKSKKNARKTKLLSAISSVVHGLKPIKQKRVYVPWERKREAEKRVRKVLNPVGGD
SIO_010081: TPH_RS01435
subclass of: SO_0000673
so part of: TPH_RS01435
location: 288730..290040
location: region:288730-290040:1
so has part: feature:288730-290040:1:exon

WP_015049448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:288730-290040:1:exon

TPH_RS01440
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01440
old locus tag: Tph_c02830
so part of: sequence
location: 290042..290599
location: region:290042-290599:1
so has part: feature:290042-290599:1:exon
subclass of: SO_0000010

position:290042:1
position: 290042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290599:1
position: 290599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290042-290599:1:exon

TPH_RS01440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01440
old locus tag: Tph_c02830
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLNIPWHRYALIVYLAEKMQEKGQRFGKTALQKLIYLLQTIYQIPVGYHFSLYMYGPFCSDLMDDLDYVSCIGGVAVSMEEGSVGYTISLSSNAELIKDKGRDFLTDYQPQIDELLETFGAMRVRDLELRSTIIFVDRDAVAGSREIGRDDFVQEIKSIKPHFSYDEINQAVDELESLGYIERR
SIO_010081: TPH_RS01440
subclass of: SO_0000673
so part of: TPH_RS01440
location: 290042..290599
location: region:290042-290599:1
so has part: feature:290042-290599:1:exon

WP_015049449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:290042-290599:1:exon

TPH_RS01445
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01445
old locus tag: Tph_c02840
so part of: sequence
location: 290625..291221
location: region:290625-291221:1
so has part: feature:290625-291221:1:exon
subclass of: SO_0000010

position:290625:1
position: 290625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291221:1
position: 291221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290625-291221:1:exon

TPH_RS01445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01445
old locus tag: Tph_c02840
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRVHSLYKFYQAHFGYPRASTDRQGLAFALAVKDCINVLQEIYQRNNLQPISEYQDSLYARRLTLCFLKNLKDLAASRFQDPLRSLRYLDYEIEVSPQLLQLGRKSGLFISSPLLWYHQQSELIFLTFGASGNMTAELGVFRTLSEQLSIQKLSVSPVELYTYWNLIDGEATTCVRRKIQPAPVDRIIHTCNQVLNAK
SIO_010081: TPH_RS01445
subclass of: SO_0000673
so part of: TPH_RS01445
location: 290625..291221
location: region:290625-291221:1
so has part: feature:290625-291221:1:exon

WP_015049450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:290625-291221:1:exon

TPH_RS01450
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01450
old locus tag: Tph_c02850
so part of: sequence
location: 291875..292150
location: region:291875-292150:1
so has part: feature:291875-292150:1:exon
subclass of: SO_0000010

position:291875:1
position: 291875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292150:1
position: 292150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291875-292150:1:exon

TPH_RS01450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01450
old locus tag: Tph_c02850
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARSRERREDFFDFLRDSKTIREMGFLEAGYLLAENTVYNFMLDVLLEKYKLGTYAFEVLWSDLVHEAAERIYKGKTIYMHRKILYRLPRV
SIO_010081: TPH_RS01450
subclass of: SO_0000673
so part of: TPH_RS01450
location: 291875..292150
location: region:291875-292150:1
so has part: feature:291875-292150:1:exon

WP_028991176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291875-292150:1:exon

TPH_RS01455
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01455
old locus tag: Tph_c02860
so part of: sequence
location: 292264..293700
location: region:292264-293700:1
so has part: feature:292264-293700:1:exon
subclass of: SO_0000010

position:292264:1
position: 292264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293700:1
position: 293700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292264-293700:1:exon

TPH_RS01455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01455
old locus tag: Tph_c02860
inference: COORDINATES: protein motif:HMM:NF037096.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HEPN domain-containing protein
translation: MPIAVEVGIAKRMVAFTNGGSTAAGSFFDLICSLIGEVLRLVQSFAREGRQVPQELLFLMQLCEGDNFQKTPPGARSYAFLLPLALENLESSPEYAEFCRLLLTEERFNEVFPPAERGEAGNLAFPKEYLLSIAWRYLNQTGTPALLPEALGEILAQSEAVREKRSFNFRMVAPLVGLSGSGELPEFRLGRWRLRRLSESEVARVQYFRQYFSLPATMVYSGEAPPCLSFALVLEDCEVPFSGLAAGWNVVRPEFLPEKELKDLVSLLQAATSVGEFGRWYAISCPVLIYYTVDWAANPFGNPFSPDYAWPLGKIHFGREWFLPPAGWEDWVSRMFSFVERAPEPEKVRYRRALRWFAESIFCDNLGDRMMKLFVALEVLCLGGIKADRGKGQKIAARCSELLHQDDRERRRWRNFIRDAYEKVRSLLFHEGADEEKLARVIKEKLKISVPEECADLLEIAFRTAWNELALGPAREKA
SIO_010081: TPH_RS01455
subclass of: SO_0000673
so part of: TPH_RS01455
location: 292264..293700
location: region:292264-293700:1
so has part: feature:292264-293700:1:exon

WP_015049452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292264-293700:1:exon

TPH_RS01465
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01465
old locus tag: Tph_c02890
so part of: sequence
location: complement(294308..294625)
location: region:294308-294625:-1
so has part: feature:294308-294625:-1:exon
subclass of: SO_0000010

position:294308:-1
position: 294308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294625:-1
position: 294625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294308-294625:-1:exon

TPH_RS01465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01465
old locus tag: Tph_c02890
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSERFSTHLLDAVLEKKRKEREETRKKFIERTFAALERLAQTINLRSFRHFFRWAYASELDERKLRLVLEDALMLKDKHRQDIVFIRKLKSSVNKEDPEYQEQST
SIO_010081: TPH_RS01465
subclass of: SO_0000673
so part of: TPH_RS01465
location: complement(294308..294625)
location: region:294308-294625:-1
so has part: feature:294308-294625:-1:exon

WP_028991175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:294308-294625:-1:exon

TPH_RS01470
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01470
old locus tag: Tph_c02900
so part of: sequence
location: complement(294691..295044)
location: region:294691-295044:-1
so has part: feature:294691-295044:-1:exon
subclass of: SO_0000010

position:294691:-1
position: 294691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295044:-1
position: 295044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294691-295044:-1:exon

TPH_RS01470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01470
old locus tag: Tph_c02900
inference: COORDINATES: protein motif:HMM:NF013970.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MVDYRRSPVISRAREIISRGENKLFFSAASAWEVAIKAALGKLTLPGNLKSFIIEQLAVNGIDPLPVGLTHVLHVSTLPALHRDPFDQLLIAQAQLENLPILTTDPQIRRYDVEVIW
SIO_010081: TPH_RS01470
subclass of: SO_0000673
so part of: TPH_RS01470
location: complement(294691..295044)
location: region:294691-295044:-1
so has part: feature:294691-295044:-1:exon

WP_236608844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:294691-295044:-1:exon

TPH_RS01475
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01475
old locus tag: Tph_c02910
so part of: sequence
location: complement(295138..295557)
location: region:295138-295557:-1
so has part: feature:295138-295557:-1:exon
subclass of: SO_0000010

position:295138:-1
position: 295138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295557:-1
position: 295557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295138-295557:-1:exon

TPH_RS01475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01475
old locus tag: Tph_c02910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049476.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PIN domain-containing protein
translation: MSKILKRAICGALLDTDFLIDLNRSKRNQWRQRAEKLLHDINSEELFISSVTVIEFLTGIPENKQAEAQNMLEELYYYATPTYKEAALAGRFRRDWLAKGYTLSVADVVNAAIAISRNLTLVTRNLAHYPFDQLTILSW
SIO_010081: TPH_RS01475
subclass of: SO_0000673
so part of: TPH_RS01475
location: complement(295138..295557)
location: region:295138-295557:-1
so has part: feature:295138-295557:-1:exon

WP_015049457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295138-295557:-1:exon

TPH_RS01480
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01480
old locus tag: Tph_c02920
so part of: sequence
location: complement(295550..295828)
location: region:295550-295828:-1
so has part: feature:295550-295828:-1:exon
subclass of: SO_0000010

position:295550:-1
position: 295550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295828:-1
position: 295828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295550-295828:-1:exon

TPH_RS01480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01480
old locus tag: Tph_c02920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049477.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVNPGKNSRITAVRLPLNILKEIDAIAGKGNRSKFILSAIEKELKRQKRLAFIQKEEGFITGKLVPDRRPEEGDDTLAFINRLREKDVRADE
SIO_010081: TPH_RS01480
subclass of: SO_0000673
so part of: TPH_RS01480
location: complement(295550..295828)
location: region:295550-295828:-1
so has part: feature:295550-295828:-1:exon

WP_015049458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295550-295828:-1:exon

TPH_RS01485
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01485
old locus tag: Tph_c02930
so part of: sequence
location: 296755..298419
location: region:296755-298419:1
so has part: feature:296755-298419:1:exon
subclass of: SO_0000010

position:296755:1
position: 296755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298419:1
position: 298419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296755-298419:1:exon

TPH_RS01485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01485
old locus tag: Tph_c02930
inference: COORDINATES: protein motif:HMM:NF012245.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MMWRERYLQLIGYFGCLLILTLLPTVVGALLTARQGVRLENFFSAALAAVVLAIALSLLSSIILWRKWLQPLAGLENFLKILGEGDPVKADRFFSSLDLHVAFKEPVMAILDNYFRLIGHMQRSSDELNCFVNLLFKGTVVSHNSLRETNTAMQEIAGGSDEQAGAAQRVAESMVVLTGLAEEITCHAQSGSQIAAQVQFRQQEGRNLLEQLLQEIEEAAGSNERAAQQMHNLEEKMSRINEFVRVVTAIAEQTNLLSLNAAIEAARAGEQGRGFAVVADEVRKLADQSAQAAQNITKLAEEIQAQARETASQVKKNVELVKGNIERGQKAKVAFQAIAEAIDQAVKAMQEINNRAHQQAEQVRTVNEDATRMAAVAEETAASIQEITVSTGEQQEAMSKMEESAKKLARMAENFFELASAYTRGGWDQTTCQALIRQGQTILEELAARPEVQKMDASQMKPLLDRVFEGSPEIQTLIATLPDGAPIYSRPPAKVANWAFRPWFQAGMEGKKFATEPYITQVTNRLAITVSVPVKKESGEVVGVLAANLVPAKG
SIO_010081: TPH_RS01485
subclass of: SO_0000673
so part of: TPH_RS01485
location: 296755..298419
location: region:296755-298419:1
so has part: feature:296755-298419:1:exon

WP_015049459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296755-298419:1:exon

TPH_RS01490
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01490
old locus tag: Tph_c02940
so part of: sequence
location: complement(298680..299039)
location: region:298680-299039:-1
so has part: feature:298680-299039:-1:exon
subclass of: SO_0000010

position:298680:-1
position: 298680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299039:-1
position: 299039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298680-299039:-1:exon

TPH_RS01490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01490
old locus tag: Tph_c02940
inference: COORDINATES: protein motif:HMM:NF014043.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF86 domain-containing protein
translation: MIDKEVLEEKLKLLTEYISDLVEEQKNISLEKLKENKIHRRYIERTLHLAVEACLDIGNHIIAELQLREPEDYKDIMAVLCDAGYLPPGSCSGRMYVCFLIICPLFSLEFFSEKPPAVP
SIO_010081: TPH_RS01490
subclass of: SO_0000673
so part of: TPH_RS01490
location: complement(298680..299039)
location: region:298680-299039:-1
so has part: feature:298680-299039:-1:exon

WP_015049460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298680-299039:-1:exon

TPH_RS01495
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01495
old locus tag: Tph_c02960
so part of: sequence
location: complement(299165..299476)
location: region:299165-299476:-1
so has part: feature:299165-299476:-1:exon
subclass of: SO_0000010

position:299165:-1
position: 299165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299476:-1
position: 299476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299165-299476:-1:exon

TPH_RS01495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01495
old locus tag: Tph_c02960
inference: COORDINATES: protein motif:HMM:NF037100.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase domain-containing protein
translation: MDSQKTQQKIQEEIINIVSQYIVHQPDITTAYIFGSLARGRFRPESDIDIAVLFSPNIKDKLERFERRLELEIALQEKLHRPVQVIDLMEAPPPAPAPGPEIR
SIO_010081: TPH_RS01495
subclass of: SO_0000673
so part of: TPH_RS01495
location: complement(299165..299476)
location: region:299165-299476:-1
so has part: feature:299165-299476:-1:exon

WP_015049462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299165-299476:-1:exon

TPH_RS01500
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01500
old locus tag: Tph_c02970
so part of: sequence
location: 300130..300408
location: region:300130-300408:1
so has part: feature:300130-300408:1:exon
subclass of: SO_0000010

position:300130:1
position: 300130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300408:1
position: 300408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300130-300408:1:exon

TPH_RS01500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01500
old locus tag: Tph_c02970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049480.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MSYIATVSQKGWVVIPKELRTKLKIRPGSKVLLTEGEDGLVITPLPEDPIAAFRGMLKGFPLVEELLEARKEEAAREELRAGQLRGAGVLPG
SIO_010081: TPH_RS01500
subclass of: SO_0000673
so part of: TPH_RS01500
location: 300130..300408
location: region:300130-300408:1
so has part: feature:300130-300408:1:exon

WP_015049463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300130-300408:1:exon

TPH_RS01505
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01505
old locus tag: Tph_c02980
so part of: sequence
location: 300356..300775
location: region:300356-300775:1
so has part: feature:300356-300775:1:exon
subclass of: SO_0000010

position:300356:1
position: 300356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300775:1
position: 300775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300356-300775:1:exon

TPH_RS01505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01505
old locus tag: Tph_c02980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049464.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MKSYVLDSYAVLAYFLDEEGAAQVEGLLREAAAGKASLNLSAVNLGEVAYITQRKAGAVGRRKLLSALDALPVTVVDADRDLALAAAEIKAKHAVSYADCFALALARRGGATVVTGDPEFKKVQGVVPIHWLPEKPKQR
SIO_010081: TPH_RS01505
subclass of: SO_0000673
so part of: TPH_RS01505
location: 300356..300775
location: region:300356-300775:1
so has part: feature:300356-300775:1:exon

WP_015049464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300356-300775:1:exon

TPH_RS15845
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15845
old locus tag: Tph_c02990
so part of: sequence
location: complement(301124..301537)
location: region:301124-301537:-1
so has part: feature:301124-301537:-1:exon
subclass of: SO_0000010

position:301124:-1
position: 301124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301537:-1
position: 301537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301124-301537:-1:exon

TPH_RS15845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15845
old locus tag: Tph_c02990
inference: COORDINATES: protein motif:HMM:NF014643.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system Phd/YefM family antitoxin
translation: MIDKEVLEEKLKLLTEYITVTTTATQLTGKTSNSNKIRRSPHLALVLSLVYNGVERLIKMSRKVNIHEAKTHFSKLLARVKEGEEIIIAKAGKPVARLVPIKEQPEKHVPGSAKGKITIAPDFDAPLSDSVLELFEK
SIO_010081: TPH_RS15845
subclass of: SO_0000673
so part of: TPH_RS15845
location: complement(301124..301537)
location: region:301124-301537:-1
so has part: feature:301124-301537:-1:exon

WP_015049465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:301124-301537:-1:exon

TPH_RS15850
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15850
old locus tag: Tph_c03000
so part of: sequence
location: 301584..301769
location: region:301584-301769:1
so has part: feature:301584-301769:1:exon
subclass of: SO_0000010

position:301584:1
position: 301584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301769:1
position: 301769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301584-301769:1:exon

TPH_RS15850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15850
old locus tag: Tph_c03000
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLHVEITPPGIYLEEDTLPVVFLQNQFTVFPDLVLEQEWCLHQINDLNRSVKLFLEGDFQL
SIO_010081: TPH_RS15850
subclass of: SO_0000673
so part of: TPH_RS15850
location: 301584..301769
location: region:301584-301769:1
so has part: feature:301584-301769:1:exon

WP_015049466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:301584-301769:1:exon

TPH_RS01520
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01520
old locus tag: Tph_c03010
so part of: sequence
location: 302066..303064
location: region:302066-303064:1
so has part: feature:302066-303064:1:exon
subclass of: SO_0000010

position:302066:1
position: 302066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303064:1
position: 303064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302066-303064:1:exon

TPH_RS01520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01520
old locus tag: Tph_c03010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049503.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MTENQIDHDRLFKELLESFFAEFMELFFPEAARSIDLTQLRFLQQEIFTDVTAGDRHEVDILVETRLKGQPGLILVHIEPQSYVQKNFNERMFVYFSRLYEKHRRKILPVAVFGYDRVRDEPDSFEIVFPFLDVLNFRFYKLELKKLDWREYIHSDNPVAAALLSKMGFRPGERVRVKVEFLRMLARMKLDPARMELLAAFFETYLKLDREEEEQLYRELGKMDKKEVDAIMQITTSWHEKGRAEGRAEGLAEGRAEGRAEGLVEGKIKAKQEVICRYLACRFGADSAAIQEKVPQLTDMDALDRVLDRLFAAGSLEEARSIIWEELSRFIQ
SIO_010081: TPH_RS01520
subclass of: SO_0000673
so part of: TPH_RS01520
location: 302066..303064
location: region:302066-303064:1
so has part: feature:302066-303064:1:exon

WP_015049467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302066-303064:1:exon

TPH_RS14570
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS14570
old locus tag: Tph_c03020
so part of: sequence
location: 303148..303906
location: region:303148-303906:1
so has part: feature:303148-303906:1:exon
subclass of: SO_0000010

position:303148:1
position: 303148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303906:1
position: 303906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303148-303906:1:exon

TPH_RS14570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS14570
old locus tag: Tph_c03020
inference: COORDINATES: protein motif:HMM:NF037100.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyltransferase
translation: MAWAADLFHRAGACFQLNRESSVLVTSGPFRFSRNPMYLGMLIWLLGMPVLLGTLSTSLFPVLFFLVANFFIIIPLEERSMEQQFGERYLDYEQLFGGGSEIEKRPRPAAMVWVVGVCGKLLARAGKFLLGGWFLVDAAKLAEERERHVALLRSEVARLTGELQRLGAQKIVLFGSMARGRLDLFTDVDLLVVMDSELPFVERSGWVYRELRPRVDADIFVYTEEEFETLKDGVFLRRALAEGVVLYEKKPS
SIO_010081: TPH_RS14570
subclass of: SO_0000673
so part of: TPH_RS14570
location: 303148..303906
location: region:303148-303906:1
so has part: feature:303148-303906:1:exon

WP_081578560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303148-303906:1:exon

TPH_RS15855
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15855
pseudo: true
so part of: sequence
location: complement(303989..>304186)
location: region:303989-304186:-1
so has part: feature:303989-304186:-1:exon
subclass of: SO_0000010

position:303989:-1
position: 303989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304186:-1
position: 304186
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303989-304186:-1:exon

TPH_RS15855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15855
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000151261.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: TPH_RS15855
subclass of: SO_0000673
so part of: TPH_RS15855
location: complement(303989..>304186)
location: region:303989-304186:-1
so has part: feature:303989-304186:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:303989-304186:-1:exon

TPH_RS14575
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS14575
pseudo: true
so part of: sequence
location: <304430..304696
location: region:304430-304696:1
so has part: feature:304430-304696:1:exon
subclass of: SO_0000010

position:304430:1
position: 304430
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:304696:1
position: 304696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304430-304696:1:exon

TPH_RS14575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS14575
inference: COORDINATES: protein motif:HMM:NF013970.2
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
SIO_010081: TPH_RS14575
subclass of: SO_0000673
so part of: TPH_RS14575
location: <304430..304696
location: region:304430-304696:1
so has part: feature:304430-304696:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:304430-304696:1:exon

TPH_RS01535
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01535
old locus tag: Tph_c03030
so part of: sequence
location: 304785..305045
location: region:304785-305045:1
so has part: feature:304785-305045:1:exon
subclass of: SO_0000010

position:304785:1
position: 304785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305045:1
position: 305045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304785-305045:1:exon

TPH_RS01535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01535
old locus tag: Tph_c03030
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAMLLTKGYNGLGVINMAVAREYVKALIDRLTDEQVEALQVIVESMAWPTEKVMPEEAAEIEEEAFADIDAGRGVKAEDVWKELGI
SIO_010081: TPH_RS01535
subclass of: SO_0000673
so part of: TPH_RS01535
location: 304785..305045
location: region:304785-305045:1
so has part: feature:304785-305045:1:exon

WP_201764473.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304785-305045:1:exon

TPH_RS01545
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01545
old locus tag: Tph_c03050
so part of: sequence
location: 305952..306230
location: region:305952-306230:1
so has part: feature:305952-306230:1:exon
subclass of: SO_0000010

position:305952:1
position: 305952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306230:1
position: 306230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305952-306230:1:exon

TPH_RS01545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01545
old locus tag: Tph_c03050
inference: COORDINATES: protein motif:HMM:NF024139.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MKRLLTPEEAAELLAVSPKSVRKWLWQGKLKGVRVGRLWRIRESDLEAFLEDRSFQKSLPQREYTRQEIRGFLKADKIAPEVARQVERLLNR
SIO_010081: TPH_RS01545
subclass of: SO_0000673
so part of: TPH_RS01545
location: 305952..306230
location: region:305952-306230:1
so has part: feature:305952-306230:1:exon

WP_015049471.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305952-306230:1:exon

TPH_RS01550
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01550
old locus tag: Tph_c03060
so part of: sequence
location: 306227..306679
location: region:306227-306679:1
so has part: feature:306227-306679:1:exon
subclass of: SO_0000010

position:306227:1
position: 306227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306679:1
position: 306679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306227-306679:1:exon

TPH_RS01550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01550
old locus tag: Tph_c03060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011345370.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PIN domain-containing protein
translation: MSEKIKVFLDASCWIAAAGSPSGGLAAILKLARAGYLKIVATKEILWEAERNIKTKMGKEALLRYYQELGTTEVEIVDQPTPEEKAQWKSMVAEKDCHVLAGAYKAAADFLVSLDKRHILTEKVKEGFPIPVKDTGEFLEGLVSELTKED
SIO_010081: TPH_RS01550
subclass of: SO_0000673
so part of: TPH_RS01550
location: 306227..306679
location: region:306227-306679:1
so has part: feature:306227-306679:1:exon

WP_015049472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:306227-306679:1:exon

TPH_RS14580
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS14580
pseudo: true
so part of: sequence
location: <306834..307013
location: region:306834-307013:1
so has part: feature:306834-307013:1:exon
subclass of: SO_0000010

position:306834:1
position: 306834
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:307013:1
position: 307013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306834-307013:1:exon

TPH_RS14580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS14580
inference: COORDINATES: protein motif:HMM:NF015947.2
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
SIO_010081: TPH_RS14580
subclass of: SO_0000673
so part of: TPH_RS14580
location: <306834..307013
location: region:306834-307013:1
so has part: feature:306834-307013:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:306834-307013:1:exon

TPH_RS01555
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01555
old locus tag: Tph_c03070
so part of: sequence
location: 307385..307642
location: region:307385-307642:1
so has part: feature:307385-307642:1:exon
subclass of: SO_0000010

position:307385:1
position: 307385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307642:1
position: 307642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307385-307642:1:exon

TPH_RS01555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01555
old locus tag: Tph_c03070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015739063.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MPIAKVSSKGQVTIPAEIRKFLGVTPGSRLRFVIRGDVVQIEKDGKGIAALKGSLQVDGEQDFLKARHHAMGEVAGEIAKEGQGD
SIO_010081: TPH_RS01555
subclass of: SO_0000673
so part of: TPH_RS01555
location: 307385..307642
location: region:307385-307642:1
so has part: feature:307385-307642:1:exon

WP_015049473.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307385-307642:1:exon

TPH_RS01560
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01560
old locus tag: Tph_c03080
so part of: sequence
location: 307605..307946
location: region:307605-307946:1
so has part: feature:307605-307946:1:exon
subclass of: SO_0000010

position:307605:1
position: 307605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307946:1
position: 307946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307605-307946:1:exon

TPH_RS01560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01560
old locus tag: Tph_c03080
inference: COORDINATES: protein motif:HMM:NF013970.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PIN domain-containing protein
translation: MPEKLQRKAKVIDANIVLRFLLNDDPEKAERCSALLQRVESGDEKVFLPDLVIADIVWTLEKFYRQPKARIRELLLPLISLRGMRLSSKSVARNALKWYVEKKHRLDGCFCCR
SIO_010081: TPH_RS01560
subclass of: SO_0000673
so part of: TPH_RS01560
location: 307605..307946
location: region:307605-307946:1
so has part: feature:307605-307946:1:exon

WP_201764474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307605-307946:1:exon

TPH_RS14585
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS14585
so part of: sequence
location: 308173..308385
location: region:308173-308385:1
so has part: feature:308173-308385:1:exon
subclass of: SO_0000010

position:308173:1
position: 308173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308385:1
position: 308385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308173-308385:1:exon

TPH_RS14585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS14585
inference: COORDINATES: protein motif:HMM:NF015947.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MPAAIYNKLGIQPGQKMLLEVQGDKIILSPKTTSYTELLAGSLKNVYGRTPEEVNDYIRKERETWGKTLS
SIO_010081: TPH_RS14585
subclass of: SO_0000673
so part of: TPH_RS14585
location: 308173..308385
location: region:308173-308385:1
so has part: feature:308173-308385:1:exon

WP_081578562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308173-308385:1:exon

TPH_RS01565
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01565
old locus tag: Tph_c03090
so part of: sequence
location: complement(308546..310366)
location: region:308546-310366:-1
so has part: feature:308546-310366:-1:exon
subclass of: SO_0000010

position:308546:-1
position: 308546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310366:-1
position: 310366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308546-310366:-1:exon

TPH_RS01565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01565
old locus tag: Tph_c03090
EC number: 2.7.7.65
inference: COORDINATES: protein motif:HMM:TIGR00254.1
GO function: GO:0009975 - cyclase activity [Evidence IEA]
GO process: GO:0009966 - regulation of signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diguanylate cyclase
translation: MKKDQEQYHKSEQHQKSKTALICHRFFLLALIATTTGWFFSFKLHPIGKLDLQDVIIEGLTLSCILISYIYILRLKINFLQLGWSLFTLGRLIDFFDEFTSEPELFDTTLEGILVISGLTLVVVGFSRAYSSLKDEIELRKKAQDELSAIFEASPVGIIKIDDEFRIERINRAMRKILGLKEGEETLTIGTDVRTIPSVGQAGLDKLFDKYRENKTVVLETPFRSLYGRECYLEIAANPIMKNGDFRGAIIVVKDITERKRIEERINHLENIRRCVLDVMCTIIAEKNPEKLLQKACKILTQKRSYIFAWLGMTEKNTKRVIPVAKAGFEDGYLEAVKITWDEADTGMGPTGRAVKTRQPKVVRNTADDPTFEPWRFEAKKRGYASSAAIPLIYEDEVFGVLNVYSIHPNAFDDEEMELLQMLAKSLAHALHSLETEEKLRKQAIRDGLTGLYNRIYFTERIQKEVERARRYRHPLSFVMMDVNNFKEINDRYSHMEGDEVLKEVAETLLNSVREIDLSFRYGGDEFLLIIPEIEESGAQKVVERIKGKLEVLSEERKSVGKPPVELSFGIATWRPETGEKWEEVLKESDLRMYENKMRKQSPGPA
SIO_010081: TPH_RS01565
subclass of: SO_0000673
so part of: TPH_RS01565
location: complement(308546..310366)
location: region:308546-310366:-1
so has part: feature:308546-310366:-1:exon

WP_049886059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308546-310366:-1:exon

TPH_RS01570
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01570
old locus tag: Tph_c03100
so part of: sequence
location: complement(310899..311318)
location: region:310899-311318:-1
so has part: feature:310899-311318:-1:exon
subclass of: SO_0000010

position:310899:-1
position: 310899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311318:-1
position: 311318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310899-311318:-1:exon

TPH_RS01570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01570
old locus tag: Tph_c03100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049457.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PIN domain-containing protein
translation: MIKMLKRAIRGALLDTDFLIDLNRSKRNQWRQRAEKLLHDINSEELFVSSVTVIEFLTGIPENRQAEAQNMLEELYCYATPTYKEAALAVRLRCDWLAKGHTLSVADVVNAAIAISRNLTLVTRNPARYPFDQLTILSW
SIO_010081: TPH_RS01570
subclass of: SO_0000673
so part of: TPH_RS01570
location: complement(310899..311318)
location: region:310899-311318:-1
so has part: feature:310899-311318:-1:exon

WP_148275813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310899-311318:-1:exon

TPH_RS01575
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01575
old locus tag: Tph_c03110
so part of: sequence
location: complement(311311..311589)
location: region:311311-311589:-1
so has part: feature:311311-311589:-1:exon
subclass of: SO_0000010

position:311311:-1
position: 311311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311589:-1
position: 311589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311311-311589:-1:exon

TPH_RS01575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01575
old locus tag: Tph_c03110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049458.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANPGKNSKITAVRLPLNILKEIDAIAGKGNRSKFILSSIEKELKRQKRLAYVQKEEGFISGELVPDRRPEEGDDTLAFINRLREKNVRSDD
SIO_010081: TPH_RS01575
subclass of: SO_0000673
so part of: TPH_RS01575
location: complement(311311..311589)
location: region:311311-311589:-1
so has part: feature:311311-311589:-1:exon

WP_015049477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:311311-311589:-1:exon

TPH_RS15860
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15860
pseudo: true
so part of: sequence
location: 312208..>312738
location: region:312208-312738:1
so has part: feature:312208-312738:1:exon
subclass of: SO_0000010

position:312208:1
position: 312208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312738:1
position: 312738
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312208-312738:1:exon

TPH_RS15860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003228021.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: flagellin
SIO_010081: TPH_RS15860
subclass of: SO_0000673
so part of: TPH_RS15860
location: 312208..>312738
location: region:312208-312738:1
so has part: feature:312208-312738:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:312208-312738:1:exon

TPH_RS15865
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15865
pseudo: true
so part of: sequence
location: <313411..313713
location: region:313411-313713:1
so has part: feature:313411-313713:1:exon
subclass of: SO_0000010

position:313411:1
position: 313411
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:313713:1
position: 313713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313411-313713:1:exon

TPH_RS15865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013402990.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: flagellin
SIO_010081: TPH_RS15865
subclass of: SO_0000673
so part of: TPH_RS15865
location: <313411..313713
location: region:313411-313713:1
so has part: feature:313411-313713:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:313411-313713:1:exon

TPH_RS01585
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01585
old locus tag: Tph_c03130
so part of: sequence
location: 314525..314845
location: region:314525-314845:1
so has part: feature:314525-314845:1:exon
subclass of: SO_0000010

position:314525:1
position: 314525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314845:1
position: 314845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314525-314845:1:exon

TPH_RS01585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01585
old locus tag: Tph_c03130
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQLEKATQITNTCKSALDIITKHVNLATGIYHPLDLNKAVDVFDQLYETGDYIHPDEVKNYLIAEGWKERHAHDVSIVWMTVATLKDFQYQRCPRPLKQGLLLRQR
SIO_010081: TPH_RS01585
subclass of: SO_0000673
so part of: TPH_RS01585
location: 314525..314845
location: region:314525-314845:1
so has part: feature:314525-314845:1:exon

WP_015049479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314525-314845:1:exon

TPH_RS01590
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01590
old locus tag: Tph_c03140
so part of: sequence
location: 315230..315508
location: region:315230-315508:1
so has part: feature:315230-315508:1:exon
subclass of: SO_0000010

position:315230:1
position: 315230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315508:1
position: 315508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315230-315508:1:exon

TPH_RS01590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01590
old locus tag: Tph_c03140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049463.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MPYIATVSQKGWVVIPKELRAKLKIRPGSKVLLVEGEEGLVITPLPEDPIAAFRGMLKGFPLVEELLEARKEEAAREELRAGQLRGAGVLPG
SIO_010081: TPH_RS01590
subclass of: SO_0000673
so part of: TPH_RS01590
location: 315230..315508
location: region:315230-315508:1
so has part: feature:315230-315508:1:exon

WP_015049480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:315230-315508:1:exon

TPH_RS01595
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01595
old locus tag: Tph_c03150
so part of: sequence
location: 315456..315875
location: region:315456-315875:1
so has part: feature:315456-315875:1:exon
subclass of: SO_0000010

position:315456:1
position: 315456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315875:1
position: 315875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315456-315875:1:exon

TPH_RS01595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01595
old locus tag: Tph_c03150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049464.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MKSYVLDSYAVLAYFQDEEGAAQVEGLLREAAAGKASLILSAVNLGEVAYVTQRKAGAGGRRKLLSALDALPVTVVDADRGLALAAAEIKAKHAVSYADCFALALARRSGGTVVTGDPEFKKAEGVAPVHWLPEKPKQR
SIO_010081: TPH_RS01595
subclass of: SO_0000673
so part of: TPH_RS01595
location: 315456..315875
location: region:315456-315875:1
so has part: feature:315456-315875:1:exon

WP_015049481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:315456-315875:1:exon

TPH_RS01605
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01605
old locus tag: Tph_c03160
so part of: sequence
location: 316376..318013
location: region:316376-318013:1
so has part: feature:316376-318013:1:exon
subclass of: SO_0000010

position:316376:1
position: 316376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318013:1
position: 318013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316376-318013:1:exon

TPH_RS01605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01605
old locus tag: Tph_c03160
inference: COORDINATES: protein motif:HMM:NF040700.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VPA1262 family N-terminal domain-containing protein
translation: MYKERVSKSSDELEQLIEEFRNFAFSGMVGFYNSCSITSIILSSQKYGWHKNVFTIVVFEELPFRDYRRKYHTKHPVKITNDLRLSVVSQRAMVADAVRLYEDACRKGRWQQPGCPELQIAECNILSKHFVPSSSDVPLNSILKNPHRYPSYVFELFCEKKEFYKKLNPEYALGKISPAVKKLYQAVNDCIPIDLEYISDRWENIIFQFPVNLLKIEARGEKDGEHINVSLRWHPLVVNERRVVNIQLDSKHDKIILGCCNTTVSESSARLRVGTTQGEMSIQVMSRDNNIILYQKAFHLINLIGVSLRNLNHEKVTINVPPRGKRQPAFTYTIQPVSIEHMSSGKIPEWREWVNKRSNLASKRELERRLEFVQYGVGGAQDWERALRDIHQLIKWHGENGVYLWDPFADGRDIISTIFACEINDAPLKVITSFNKFVRKIAVRNGIEICNCEDWMRHLKGFLSKAVQQRKVNLEVRCQHGCRGWKFHDRFLIFPGLEPKVWSLGCSINALGQSHSILMKVEHAQPVLDAFELLWEELDQCVIWP
SIO_010081: TPH_RS01605
subclass of: SO_0000673
so part of: TPH_RS01605
location: 316376..318013
location: region:316376-318013:1
so has part: feature:316376-318013:1:exon

WP_015049482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316376-318013:1:exon

TPH_RS01610
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01610
old locus tag: Tph_c03170
so part of: sequence
location: 317995..319623
location: region:317995-319623:1
so has part: feature:317995-319623:1:exon
subclass of: SO_0000010

position:317995:1
position: 317995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319623:1
position: 319623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317995-319623:1:exon

TPH_RS01610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01610
old locus tag: Tph_c03170
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRHMALEKLFLKRKKTIDIYRGRTFRQMLAELEALLRDYTAWENYEQDYKNLVEEKAEMLSKVLMGEIVERDEFLSEEALWNERGWQLKLVVGGLLHFARKQTKEILLQFAALYNLLEMPVVILRVIIETCPDITKNIKDAISECLHTNYFFDCKLSLRESSRGTWEEHVLREYEEGIKDGNISKVTSFMQRWHAGHLDYLEGPYAVVLALVYYCDKDLFAKMVAATETPVFVCLVCEDPEYAYDLVTLWKIAENGGIWARMEVFYHLSKLLLGCRMCVDGREKIEERAFRRMITVYMGRTIVLLLDTKKAGVLRYLLDAMPGLDLRRSEIRYLLFFLGQYLGKGISQNLSGEFIEQEFNLWNPPHFDPGVMFLLYGIQRALEKDNSSLLEALNKAVLKKWLEILCKSYNCTDEVDSYNFLPFTSLDLSVFYALSKRWQTRRRSVQFLKGLCRRLQLTDGMWFKSPMAEEQRRKALYAGIRAHAKAWSMLPPDDSISEISYSLKFLQKYFMDQRNWERMPGDAGESNKMSDIFMEILKSYQN
SIO_010081: TPH_RS01610
subclass of: SO_0000673
so part of: TPH_RS01610
location: 317995..319623
location: region:317995-319623:1
so has part: feature:317995-319623:1:exon

WP_015049483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317995-319623:1:exon

TPH_RS01615
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01615
old locus tag: Tph_c03190
so part of: sequence
location: complement(319917..320384)
location: region:319917-320384:-1
so has part: feature:319917-320384:-1:exon
subclass of: SO_0000010

position:319917:-1
position: 319917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320384:-1
position: 320384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319917-320384:-1:exon

TPH_RS01615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01615
old locus tag: Tph_c03190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015738309.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MICYLDTSALVKLYVQEQGSEMVHKLVDEASVVVTSKVAYAEARAALARGFMDGYIEEKDYRQVVAALQNDWPKCLVIEVTDSLVFLAGELAEKYCLRGFDAIHLASAVTLKTQVKKRIAAGCFDDRLWEALRAVDIKVLPERKPSLFLTSKAES
SIO_010081: TPH_RS01615
subclass of: SO_0000673
so part of: TPH_RS01615
location: complement(319917..320384)
location: region:319917-320384:-1
so has part: feature:319917-320384:-1:exon

WP_015049485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:319917-320384:-1:exon

TPH_RS01620
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01620
old locus tag: Tph_c03200
so part of: sequence
location: complement(320381..320647)
location: region:320381-320647:-1
so has part: feature:320381-320647:-1:exon
subclass of: SO_0000010

position:320381:-1
position: 320381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320647:-1
position: 320647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320381-320647:-1:exon

TPH_RS01620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01620
old locus tag: Tph_c03200
inference: COORDINATES: protein motif:HMM:NF014643.2
GO process: GO:0008219 - cell death [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system prevent-host-death family antitoxin
translation: MKAGIREVKNRFSEYLRRVKKGEILLITERNVPIAKLVPTQGEEQVSVLTMVEQGMASWRGGKPQGIATPPVISGNKSIAALVVKDRR
SIO_010081: TPH_RS01620
subclass of: SO_0000673
so part of: TPH_RS01620
location: complement(320381..320647)
location: region:320381-320647:-1
so has part: feature:320381-320647:-1:exon

WP_015049486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:320381-320647:-1:exon

TPH_RS16150
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS16150
so part of: sequence
location: 320737..320868
location: region:320737-320868:1
so has part: feature:320737-320868:1:exon
subclass of: SO_0000010

position:320737:1
position: 320737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320868:1
position: 320868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320737-320868:1:exon

TPH_RS16150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS16150
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDFAAAEQRARNILGKWAYLFIQPGSVNINVWRNGDTAHALSD
SIO_010081: TPH_RS16150
subclass of: SO_0000673
so part of: TPH_RS16150
location: 320737..320868
location: region:320737-320868:1
so has part: feature:320737-320868:1:exon

WP_269077476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:320737-320868:1:exon

TPH_RS01625
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01625
old locus tag: Tph_c03210
so part of: sequence
location: 320914..321162
location: region:320914-321162:1
so has part: feature:320914-321162:1:exon
subclass of: SO_0000010

position:320914:1
position: 320914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321162:1
position: 321162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320914-321162:1:exon

TPH_RS01625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01625
old locus tag: Tph_c03210
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGKKNKYYKGIVTGNVVVLEDGNSMPEGTKVIVIPEREIEKKPDFESDPFLTVDEWAPLIINELPGDLAHQHDHYLYGTEKR
SIO_010081: TPH_RS01625
subclass of: SO_0000673
so part of: TPH_RS01625
location: 320914..321162
location: region:320914-321162:1
so has part: feature:320914-321162:1:exon

WP_015049487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:320914-321162:1:exon

TPH_RS01630
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01630
old locus tag: Tph_c03220
so part of: sequence
location: complement(321181..321936)
location: region:321181-321936:-1
so has part: feature:321181-321936:-1:exon
subclass of: SO_0000010

position:321181:-1
position: 321181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321936:-1
position: 321936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321181-321936:-1:exon

TPH_RS01630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01630
old locus tag: Tph_c03220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011392965.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ECF transporter S component
translation: MYGNKGKPLAVFIGIVLTAGMLAAGLRQQNWGLLTTALMLTFLILAYLGFERGALSSREIGLIAVLGTVAAVARLPFAAIPNLQPVTFMVIVSGFVFGPGAGFMVGSTAALVSNFFLGHGPWTLWQMLGWGLAGISAGLLRKLCPRIGTAGMTLFCFAWGYLYGWIINLWFWTGFLHPLNWESLLAACAASFWFDTLHALGNAVFYLTLGHRIIKILERFRKKITFTPLTKQPAGGEHHRDESMRSSQLCR
SIO_010081: TPH_RS01630
subclass of: SO_0000673
so part of: TPH_RS01630
location: complement(321181..321936)
location: region:321181-321936:-1
so has part: feature:321181-321936:-1:exon

WP_015049488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321181-321936:-1:exon

TPH_RS01635
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01635
old locus tag: Tph_c03230
so part of: sequence
location: complement(321909..323624)
location: region:321909-323624:-1
so has part: feature:321909-323624:-1:exon
subclass of: SO_0000010

position:321909:-1
position: 321909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323624:-1
position: 323624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321909-323624:-1:exon

TPH_RS01635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01635
old locus tag: Tph_c03230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011392966.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0015833 - peptide transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: energy-coupling factor transporter ATPase
translation: MPLFEIENLTYFYPESRTPALDDVNLDVEEGELLLIAGGSGSGKSSLARLLAGLIPAFYGGTLAGRVLFRGKSLTETASPHLNTQIGIVFQDPEKQLVMTTVEAEIAFGLENLGLPQEEMLRRLSEVMSFLGLTPLKDEFTANLSGGQKQKVALAAVLAMQPRVLILDEPTSQLDPPAADEFFNLVERLNKEMGYTVVLIEQRLERCFHLADRLAIMERGRILRSGPVKEVARWEVENSLPFLPPVAKFFAELRWPSLPLTVKEGRRELKRFYGGTPVFGKEEPQHLRLRSTPPAREGGRDRPVLEVKNVWFTYPNGKEALKGVNLKVNRGELAVVIGENAAGKSTLLKQMAGILKPSRGSVLLAGRDTRTLSLPELGRRVGYLAQNPDDTLFQDSVEEELRFTLDNLGLEDGGVIDGVLKKLDLERHRKANPRDLSSGERQRVALAAVLVARPELLILDEPTRGIDCRLKEELGGLLAGLVKEGLTVVMVTHDVEFAAEYAGRVVMMFDGRIVNDGSKEEVLAGSTFYSPQMARLFKDFAAEGVLTVREGIEKISANGDIALCTGTKASL
SIO_010081: TPH_RS01635
subclass of: SO_0000673
so part of: TPH_RS01635
location: complement(321909..323624)
location: region:321909-323624:-1
so has part: feature:321909-323624:-1:exon

WP_015049489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321909-323624:-1:exon

TPH_RS01640
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01640
old locus tag: Tph_c03240
so part of: sequence
location: complement(323597..324526)
location: region:323597-324526:-1
so has part: feature:323597-324526:-1:exon
subclass of: SO_0000010

position:323597:-1
position: 323597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324526:-1
position: 324526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323597-324526:-1:exon

TPH_RS01640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01640
old locus tag: Tph_c03240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011392967.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: energy-coupling factor transporter transmembrane component T
translation: MLDRLFYEDKGVLLQNLHSVTALSYPAVLFALALLFSHPLYLAGIFLVSALAVVTAEAMEKWEFYLKAGIWMALLIMIINPLSFHGGKTIIWRGPTLPIVGDASICLEAICYGAAMGIRLLSILTIFCLAAAVVHPDRFLSLFSRFAYKSALVVSLATRMLPAAARELAKARVMLQMRGVDYTAGNLKERLKKYSWLLDILLLSSLEGALQTAEAMQARAFGSGPRSRYRRELWRPRDLLCLASCCLALAFSFYAKAKGYADYNYYPQLGALMPHPSSPVLLGIILANLALPSLLNWGWKRCPYLRSKI
SIO_010081: TPH_RS01640
subclass of: SO_0000673
so part of: TPH_RS01640
location: complement(323597..324526)
location: region:323597-324526:-1
so has part: feature:323597-324526:-1:exon

WP_015049490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323597-324526:-1:exon

TPH_RS01645
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01645
old locus tag: Tph_c03250
so part of: sequence
location: complement(324539..325933)
location: region:324539-325933:-1
so has part: feature:324539-325933:-1:exon
subclass of: SO_0000010

position:324539:-1
position: 324539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325933:-1
position: 325933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324539-325933:-1:exon

TPH_RS01645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01645
old locus tag: Tph_c03250
inference: COORDINATES: protein motif:HMM:NF024640.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stalk domain-containing protein
translation: MKTLRKKLISLSLVPVLLLSFALTPLASAAPPSGEIGQAMERATAYLKRQEVSKGGLSPWSYLALAGAGASVNTAAVRNAAELLWQDEMLQSGDTNSWCLLVFTLLAAGADPSNFHGQNLIQQIQRSQLPNGKFPDNLQTGGEDLLNAHVWAVLALTAAGAAVPDRDQAIRWLIERQHPDGSFYWYAPDQKTSDVDSTGMALMALGALGVGKDHPAVQKALAYLEKAQKPNGGFESWGAENPESCSMVIQGLTALGIDPAGHEFTKPGGNPVTAMLRFQLADGSFEHVKGGGANEMATQQALIALADVTSGNTLFERLRAKASAGLTGNTEKTGQELARFTVGNRSYTLSTAGGEIREEMDVAPFINSGRTYVPVRYLAYALGVPEKGIVWDGKSNTVTLTLGSTVVKLTVGEKVLLLNGTVRTMDVAPVNVSGRVFLPARFVANAFGYQVQWLESSREVLITR
SIO_010081: TPH_RS01645
subclass of: SO_0000673
so part of: TPH_RS01645
location: complement(324539..325933)
location: region:324539-325933:-1
so has part: feature:324539-325933:-1:exon

WP_015049491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324539-325933:-1:exon

TPH_RS01650
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01650
old locus tag: Tph_c03260
so part of: sequence
location: complement(325947..326639)
location: region:325947-326639:-1
so has part: feature:325947-326639:-1:exon
subclass of: SO_0000010

position:325947:-1
position: 325947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326639:-1
position: 326639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325947-326639:-1:exon

TPH_RS01650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01650
old locus tag: Tph_c03260
inference: COORDINATES: protein motif:HMM:NF025833.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4430 domain-containing protein
translation: MKRYSYLLLVALLLLGLIVPVTYSSWVQKKGQPVGQTGTPAREETAPAQGTGTTPTADGEEKGTETGSANSRSEAVGPVSTASGKMPAGDSQQKQAPQQPSQERAAEPAPPASGSVTVVGIAVVGSGGELLYGPAEVRIGKESSWGVTALGALDATGLPYTLSPRYADLVDSIAGQRNRGQSGWMYNVNGEIPAVAAAKKPLKQGDKVIWWYSKGINQAPPSWDDLEKQR
SIO_010081: TPH_RS01650
subclass of: SO_0000673
so part of: TPH_RS01650
location: complement(325947..326639)
location: region:325947-326639:-1
so has part: feature:325947-326639:-1:exon

WP_015049492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325947-326639:-1:exon

TPH_RS01655
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01655
old locus tag: Tph_c03270
so part of: sequence
location: complement(326837..329896)
location: region:326837-329896:-1
so has part: feature:326837-329896:-1:exon
subclass of: SO_0000010

position:326837:-1
position: 326837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329896:-1
position: 329896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326837-329896:-1:exon

TPH_RS01655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01655
old locus tag: Tph_c03270
inference: COORDINATES: protein motif:HMM:NF025833.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S-layer homology domain-containing protein
translation: MSTRRKGFRVLALLLIAVMSFSFAALPPAVPFAHAGSSDLSGLADRAANYLYNEFVREGAKNGDSSVGSYAVWTLTQAGVDVSAWLHDGTSLKDAVIEIITQDIADPEVSVKVLAQDLLAAQALERQDLAEELLEVLKNREQSTGGFDYNVYSDMPAYDLLGRSGKLDAMNTDYARNYILSTQNKVYASIPEAVYESVYGSWGMSWDGVFYPDFITTAQAIRALSYLDPLKEDPEIRAAVDLGLQWLKKQQKEDGSFAVSDWEDPLINTVEMVATLEVLEIDPSSLTSNTGKSPVDYLIGNALNPDGSFGTSKNAMDATWALWGYWLLGGRVQNQLFMEPTSASLSVGEKVYFKSMLNGSDVTQDAVWTVGEQSIASVAYGLVTGLKAGTTVVSAAYGGLTGSAVLTVKSPVPPGGTSTYTVEIAVVGMDGELLYGPGPVTISAGSRWGMTALGALDATDLPYSMSDQWPDFIESIAGQAGSGMAGWCYVVNGNIPSVAAAKYDVRDGDRIIWYYSKDINEPPPKWDDLVKRAASGTVSPSAAVEEIADLLTDLEKSKLTPGEVITGIGDLLDQLGAAEATEELKSKLAEAVNALSLRLAKIPDEALSVRTDGATAKVEVDGDAIKNQVSAVKSAVTLAEKLEQIGVNEVGNLALEQIVVKLPTELASQKGFTVELPAEAGEELVSANLGLAVEGPEVSLSLPPEVLKKACDTAPNLAGLELAVARREPSKLNPFKGASVVGNVAFDLEANTITAEGKKESLKGSFSKKVTVTLSLEGIDLGGIDRGRLAVYRQKGDGSWEFVGGSLSADEKSYSFETDHLSVYSLMEFQNPFKDVTSHWARETIELMAMRLIARGISEDSFAPDQKLSRAQFAAFLVRALDVEEETPQVRTFSDVPPDHWGYRAIEAAFREGLVAGTGAGRFEPERAIKREEMAVILAAVLKRNGIATALTDTQRDEVLKGYGDSDRISEWAKEGLAVCVSKGIIKGRAEAALAPLGSATRAEAVVVLENLLRLLGKL
SIO_010081: TPH_RS01655
subclass of: SO_0000673
so part of: TPH_RS01655
location: complement(326837..329896)
location: region:326837-329896:-1
so has part: feature:326837-329896:-1:exon

WP_015049493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326837-329896:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 1089553
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00174
inference: COORDINATES: profile:INFERNAL:1.1.1
note: cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: adenosylcobalamin
so part of: sequence
location: complement(330050..330237)
location: region:330050-330237:-1
so has part: feature:330050-330237:-1:region

position:330050:-1
position: 330050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330237:-1
position: 330237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330050-330237:-1:region

TPH_RS01660
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01660
old locus tag: Tph_c03280
so part of: sequence
location: 330418..330639
location: region:330418-330639:1
so has part: feature:330418-330639:1:exon
subclass of: SO_0000010

position:330418:1
position: 330418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330639:1
position: 330639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330418-330639:1:exon

TPH_RS01660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01660
old locus tag: Tph_c03280
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRLNITLPEELYREIESVPNKSRLIAEALKEKLEREKKKRLAELLIEGYRATKEEERKLNEEWENVTLEEWS
SIO_010081: TPH_RS01660
subclass of: SO_0000673
so part of: TPH_RS01660
location: 330418..330639
location: region:330418-330639:1
so has part: feature:330418-330639:1:exon

WP_015049494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330418-330639:1:exon

TPH_RS01665
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01665
old locus tag: Tph_c03290
so part of: sequence
location: 330641..330988
location: region:330641-330988:1
so has part: feature:330641-330988:1:exon
subclass of: SO_0000010

position:330641:1
position: 330641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330988:1
position: 330988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330641-330988:1:exon

TPH_RS01665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01665
old locus tag: Tph_c03290
inference: COORDINATES: protein motif:HMM:NF014505.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system PemK/MazF family toxin
translation: MDFPKRGEIWLVSLEPTLGREIGKTRPALVISNDLNNQYAGTITVLLITSKTEKIYPFETFISGEESGLPRDSKIKSNQIRTVDKRRLVKYLARISEEKLKQVERAILIHLGIEC
SIO_010081: TPH_RS01665
subclass of: SO_0000673
so part of: TPH_RS01665
location: 330641..330988
location: region:330641-330988:1
so has part: feature:330641-330988:1:exon

WP_015049495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330641-330988:1:exon

TPH_RS15030
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15030
so part of: sequence
location: 331022..331210
location: region:331022-331210:1
so has part: feature:331022-331210:1:exon
subclass of: SO_0000010

position:331022:1
position: 331022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331210:1
position: 331210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331022-331210:1:exon

TPH_RS15030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15030
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MCIAWLDKEVLLTGSMLNRCGCSFLVRRDCLVDEASGEMGGGALKGEYKAGGRSQSGQPPVD
SIO_010081: TPH_RS15030
subclass of: SO_0000673
so part of: TPH_RS15030
location: 331022..331210
location: region:331022-331210:1
so has part: feature:331022-331210:1:exon

WP_148275815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:331022-331210:1:exon

TPH_RS01670
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01670
old locus tag: Tph_c03300
so part of: sequence
location: complement(331313..331516)
location: region:331313-331516:-1
so has part: feature:331313-331516:-1:exon
subclass of: SO_0000010

position:331313:-1
position: 331313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331516:-1
position: 331516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331313-331516:-1:exon

TPH_RS01670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01670
old locus tag: Tph_c03300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011393660.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6485 family protein
translation: MECRKEKNLEKCSCTYDYCERKGLCCECVAYHREHGELPGCFFPAEVERTYDRSIEAFIRCHQKSKK
SIO_010081: TPH_RS01670
subclass of: SO_0000673
so part of: TPH_RS01670
location: complement(331313..331516)
location: region:331313-331516:-1
so has part: feature:331313-331516:-1:exon

WP_015049496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:331313-331516:-1:exon

TPH_RS01675
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01675
old locus tag: Tph_c03310
so part of: sequence
location: complement(331738..333138)
location: region:331738-333138:-1
so has part: feature:331738-333138:-1:exon
subclass of: SO_0000010

position:331738:-1
position: 331738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333138:-1
position: 333138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331738-333138:-1:exon

TPH_RS01675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01675
old locus tag: Tph_c03310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011393572.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MATE family efflux transporter
translation: MDERSHELGHAPVGRLLWHFSWPAITGMMCNALYNVVDRVFVGHGVGRLAIAATTVAFPPMIILMALSLLIGVGTTALISIRLGEQKKEEAEAVAANGTVLLILLPLCFAILYFFFPEPILRLFGANDEVLPYARDFMHIIMLGSVFGSLGMGMNNFIRAEGNPIMAMSTQVLGALINGVLNYVFIFHFHMGIKGSALATVTGQLFATIWVLSYYLTGRSLIKLRLKNFVPRLPIILNVISIGFAPFALQIANCLQQVLLNKAVLRYSGDLGLSAIGIMMSIGGLLLMPVLGLSQGAQPIIGFNYGARQYGRVKETLKKAVIAASCVSIVGYLIIQMWPLKIAGLFTEGDTALISMTANAMTVFFGMIFIIGFQVTCSHYFQAVGKAKQAAVLSLSRQVLFFIPLLLILPHFWGINGVWRTAPIADALAATITAGFIFREMKLLSKKESAAEAQMTAVEFTRHRYC
SIO_010081: TPH_RS01675
subclass of: SO_0000673
so part of: TPH_RS01675
location: complement(331738..333138)
location: region:331738-333138:-1
so has part: feature:331738-333138:-1:exon

WP_015049497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:331738-333138:-1:exon

TPH_RS01680
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01680
old locus tag: Tph_c03320
so part of: sequence
location: 333859..334371
location: region:333859-334371:1
so has part: feature:333859-334371:1:exon
subclass of: SO_0000010

position:333859:1
position: 333859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334371:1
position: 334371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333859-334371:1:exon

TPH_RS01680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01680
old locus tag: Tph_c03320
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDEQLMALQLCLNEVGGFRMDSFSERLKYQKMVYLMQLFGIDLGYRFEWYLRGPYCTELTADGFEIDKHRERMEEYVKDYELSNEAREKLARFRDMISRPPADGLSQESWLELLASVHYLAQIAYVKNPEDREYDRVSARLRGKKPWYKKEQIAQAWSLLKTYGLLKEGP
SIO_010081: TPH_RS01680
subclass of: SO_0000673
so part of: TPH_RS01680
location: 333859..334371
location: region:333859-334371:1
so has part: feature:333859-334371:1:exon

WP_028991167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333859-334371:1:exon

TPH_RS01685
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01685
old locus tag: Tph_c03330
so part of: sequence
location: 334401..335324
location: region:334401-335324:1
so has part: feature:334401-335324:1:exon
subclass of: SO_0000010

position:334401:1
position: 334401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335324:1
position: 335324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334401-335324:1:exon

TPH_RS01685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01685
old locus tag: Tph_c03330
inference: COORDINATES: protein motif:HMM:NF014069.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MSEKFTRIINDNIYGAIPLTEAEWEVINTPIFQRLRRIRQLGLSSYVFPTAEHTRFSHSLGVLFIMGKITELLHQKGILNEDDVRKLRMASLLHDIGHYPLSHVGEAVFMRIQFEEEQVIRKKSSFSDENDLTKAGRRYRIKSVSHERVGTEIITKHHKIVNILKKYDFDPVELAKIINGEHEGNIIYNQLMHSSLDADRLDYLLRDATHTGVRYGLVDFDYLIRHFEVGEEKDTKGKPVKVIGVSQKTTHVLEHYLTARYFLYSQVIFHKTVVAFEILAKALLYYASKSGMLGGDWFRKVVSIMMV
SIO_010081: TPH_RS01685
subclass of: SO_0000673
so part of: TPH_RS01685
location: 334401..335324
location: region:334401-335324:1
so has part: feature:334401-335324:1:exon

WP_015049499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334401-335324:1:exon

TPH_RS01690
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01690
old locus tag: Tph_c03340
so part of: sequence
location: 335409..336641
location: region:335409-336641:1
so has part: feature:335409-336641:1:exon
subclass of: SO_0000010

position:335409:1
position: 335409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336641:1
position: 336641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335409-336641:1:exon

TPH_RS01690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01690
old locus tag: Tph_c03340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014162180.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256 family transposase
translation: MAHYQVTVDCDLLQGLFIRDDGLARLVENIVNQILDAQATEQLRAKPYERTEERQGYRNGYRDKLLKSRVGELTLMVPRLRSGHFSTELFERYQRSEQALLLAMVEMVVNGVSTRKVRAVVDELCGTEFSKSTVSSLCKRLDDIVKEWNERDLSSQEYPFLLVDAIVIRVRKGGRVRLSSVLLATGINREGYREILGLMLGDSESEAAWSEFFGRLKERGLKGVDLVVSDDHKGLINAIETHFQGATWQRCQTHFIRNILDACPKSLQGDLHGRLRLIFDAPDMETARRLLNETIEAFGARAPKAVERLEAGFEDAMAVMALPGRYRKRLRTTNGVERLNQEIRRRERVIRIFPNEESAVRLIGAVLVEIDEVWTTGKRYFDMAEYWEWKANTEKQQKEVNNADTQVNVA
SIO_010081: TPH_RS01690
subclass of: SO_0000673
so part of: TPH_RS01690
location: 335409..336641
location: region:335409-336641:1
so has part: feature:335409-336641:1:exon

WP_014162180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:335409-336641:1:exon

TPH_RS01695
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01695
old locus tag: Tph_c03350
so part of: sequence
location: 336856..337251
location: region:336856-337251:1
so has part: feature:336856-337251:1:exon
subclass of: SO_0000010

position:336856:1
position: 336856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337251:1
position: 337251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336856-337251:1:exon

TPH_RS01695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01695
old locus tag: Tph_c03350
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIKEVKSLIRTSENRYAPEFISFRTLLDKHLTALAEKASVKHKWLFYHEIPLSFENISPYFNISETLSEEDKKEAARIIAKDGTAKLLIEDQNSVIHHLATLKLVVLRLYCLNTSKAACGRVLEKTEAMLY
SIO_010081: TPH_RS01695
subclass of: SO_0000673
so part of: TPH_RS01695
location: 336856..337251
location: region:336856-337251:1
so has part: feature:336856-337251:1:exon

WP_015049500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336856-337251:1:exon

TPH_RS01700
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01700
old locus tag: Tph_c03360
so part of: sequence
location: 337510..340770
location: region:337510-340770:1
so has part: feature:337510-340770:1:exon
subclass of: SO_0000010

position:337510:1
position: 337510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340770:1
position: 340770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337510-340770:1:exon

TPH_RS01700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01700
old locus tag: Tph_c03360
inference: COORDINATES: protein motif:HMM:NF024487.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA domain-containing protein
translation: MIGLSKSEKETPPELLTELQVGELVVVDGVVGERTVRRTTKTGGVFVKAPLHMDDLASVWCVWWQAQSAPQPGQRVRLRGEVQFYDGNMELHVRETIPLFDDKPAALEHKLLRFYIACLEAEQMRELEFAIDDGGRRFVLLESGEEHVISGEATWTDLPDAPQLTQWLSRRLLAGRAEQVFVGYPVVTGYRDRNGLPYKVLSPLFYVPVEIKRAASSGYRVLPETAVPELNIFALELLGMSREERVGFVEAVEELEEIQTASSARARMESWLNILVKEGLADPGFCLDPGHLGPLKDGISNTCILYTGERGPIIRNLIADLEDLSLLPVEELRRGPLGVLMGAIPASLPPAAEPQPSIIPSNLAQDRAITSAFSVPLTVVTGPPGTGKSQLIINAIASALARGQTVCFASKNNQAVDVIFERLAAVSDEAVPIRAGTTKYRSNIALTIQRALSRPDRPNELGSAITDWRKVEKDLFPIYQVAREVEKVEAELAAEEARYEELNRTAPRAVFAVADASVMAAAAKEVLALLPLASRPRPFWPWSRRRWKEAKARLAVAWDRLSRSAGTGILLPDEPEQNAAEECLRLSQLALDIEAQRLRIEDARKKLASLPNRWELHERLMEISARRLETGRRLFEANWQRLIAGALPEKRAAASALAEGLAAAAGGGKASIRRLLLQVPDVLHVFPIWGVTNLSARTNFPVRGKLFDLVIIDEASQCDIPSAIPLLYRARRALIIGDPKQLTHITSLREVTEDNLARRFGLTPNDLLVFSYRSRSLFGLASARVGEKPLFLDQHFRSHPAIITFSNDHFYGSRLLILTDESRLQPGPAVSWIHIPGQFRRGQNGRSVVNPPEAEAVVRQLEALHSQIKDQGLTVGVVTPYRAQAEAIRDLVARRLPDLEDSLVVATAHRFQGDERDIIIFSPVVSREMAPYHVTFASNPNLVNVSVTRARQKLIIVGDREVCLASPGVLRDLAQYIMDLEKGGFRSPLERRLFDALVKAGVNVQTGVEAEGYKLDLAVVKGERRIDVECDGASFHRDQRADSIRDERLRSAGWEVVRFSGREIQRNLDECVSRVKELLSDGVMYS
SIO_010081: TPH_RS01700
subclass of: SO_0000673
so part of: TPH_RS01700
location: 337510..340770
location: region:337510-340770:1
so has part: feature:337510-340770:1:exon

WP_015049501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337510-340770:1:exon

TPH_RS01705
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01705
old locus tag: Tph_c03370
so part of: sequence
location: 340785..341000
location: region:340785-341000:1
so has part: feature:340785-341000:1:exon
subclass of: SO_0000010

position:340785:1
position: 340785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341000:1
position: 341000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340785-341000:1:exon

TPH_RS01705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01705
old locus tag: Tph_c03370
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAAGRVFHLESIEQIKELISVDTLKTMQLLGFNYKAAIGEPLTQICANAILSLAKRESPSYQGGSGKNKKR
SIO_010081: TPH_RS01705
subclass of: SO_0000673
so part of: TPH_RS01705
location: 340785..341000
location: region:340785-341000:1
so has part: feature:340785-341000:1:exon

WP_201764475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340785-341000:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 1089553
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01055
inference: COORDINATES: profile:INFERNAL:1.1.1
note: molybdenum cofactor riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: molybdenum cofactor
so part of: sequence
location: complement(341221..341344)
location: region:341221-341344:-1
so has part: feature:341221-341344:-1:region

position:341221:-1
position: 341221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341344:-1
position: 341344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341221-341344:-1:region

TPH_RS01715
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01715
old locus tag: Tph_c03380
so part of: sequence
location: 341751..342761
location: region:341751-342761:1
so has part: feature:341751-342761:1:exon
subclass of: SO_0000010

position:341751:1
position: 341751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342761:1
position: 342761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341751-342761:1:exon

TPH_RS01715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01715
old locus tag: Tph_c03380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049467.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MTENQIDHDRLFKELLESFFAEFMELFFPEAARSIDLTQIRFLQQEIFTDVAAGERHEVDILVETRLKGQPGLILVHIEPQSYVQKNFNERMFVYFSRLYEKHRRKILPVAVFGYDRVRDEPDSFEIVFPFLDVLNFRFYKLELKKLDWREYIHSDNPVAAALLSKMGFRPGERVRVKLEFLRMLARMKLDPARMELLAAFFETYLKLDREEEEQLYRELGKMDKKEVDAIMQITTSWHEKGRAEGLAEGRAEGRAEGRAEGLAEGLVEGKIKAKQEVICRYLACRFGADSAAIQEKVPQLTDMDALDRVLDRLFVVGSLEEARSIIWEELSRFIQ
SIO_010081: TPH_RS01715
subclass of: SO_0000673
so part of: TPH_RS01715
location: 341751..342761
location: region:341751-342761:1
so has part: feature:341751-342761:1:exon

WP_015049503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:341751-342761:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 1089553
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00174
inference: COORDINATES: profile:INFERNAL:1.1.1
note: cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: adenosylcobalamin
so part of: sequence
location: 343428..343619
location: region:343428-343619:1
so has part: feature:343428-343619:1:region

position:343428:1
position: 343428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343619:1
position: 343619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343428-343619:1:region

TPH_RS01725
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01725
old locus tag: Tph_c03390
so part of: sequence
location: 343947..344987
location: region:343947-344987:1
so has part: feature:343947-344987:1:exon
subclass of: SO_0000010

position:343947:1
position: 343947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344987:1
position: 344987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343947-344987:1:exon

TPH_RS01725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01725
old locus tag: Tph_c03390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015738582.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MDGTKRCFPFTAIVGQERMKEALILNVINPLLGGVLIRGEKGTAKSTAVRALAELLPERKQVADCMFGCDPDDESAMCDTCRERKRKEGRLAVRKSKMRVVELPISATEDRVVGTLDIEHAIKTGEKRFEPGILAQANRNILYVDEVNLLEDHVVDLLLDAAAMGVNAIEREGISYSHPSRFVLVGTMNPEEGDLRPQLLDRFGLVVDVTGEKDPVTRAEVIKRRLQYEQDPESFATAYQEAQQELSHRIEAAKLRLPEVSCSDEMLEIAAKISIAMDVDGHRADIYMIKAAITIAAFNNRESVTFEDMLKAASLVLPHRMRRKPFEEGIIDFSKVEEMIYSSARG
SIO_010081: TPH_RS01725
subclass of: SO_0000673
so part of: TPH_RS01725
location: 343947..344987
location: region:343947-344987:1
so has part: feature:343947-344987:1:exon

WP_015049504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:343947-344987:1:exon

TPH_RS01730
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01730
old locus tag: Tph_c03400
so part of: sequence
location: 344995..346920
location: region:344995-346920:1
so has part: feature:344995-346920:1:exon
subclass of: SO_0000010

position:344995:1
position: 344995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346920:1
position: 346920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344995-346920:1:exon

TPH_RS01730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01730
old locus tag: Tph_c03400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015739867.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: magnesium chelatase subunit D family protein
translation: MGHNLVFPFAAVEGQDAVKKALIWNAVNPSIGGVLISGEKGTAKSTLVRGLAALLPGIKVVELPLNVTEDCLVGTLDLERAVKEGKKAFEPGIFQKADGNILYVDEVNLLPENIVNCILEVSASGVNRVEREGISYSHPSRFVLVGTMNPEEGMLRPQLLDRFGLYVEVKGLEDLALRKDVIKRRLEYERDPAGYVKKWQKESEEIRASIAQARERLERVQVTEHAMSLAGEMAEKGNCAGHRAEIAIVETAKSIAAICGRNRIIIEDIKEAARYALPHRVRERNQTCICLQEQEPPIDETDERKRGADLPEGDRSRDESVTQEYQNLNQEPENGGDSPAGSGEMDGGKNGSQQAGAFGSEENVEEPGEIFAVVPWEIRPQDRLQRRGSGKRSLSATKGREGRYVKYCFPRGKPRDIAFDATIRAAAPFQRQREKDGVALAICNSDFREKIRERRTGSTILFVVDASGSMGANRRMRAVKGAVLSLLTDAYQKRDRVGMISFRKNDAELLLGVTRSVDLAQKKLRDLPTGGRTPLAAGLYRGYEVLKVAMLRDPQTIPFIILVTDGRANVALNGGDPVDDALRMARKIAAEGIKSLVIDTEKGYPRMGLARKIAEAMKAGYLELDELESAQIVWSVKNFVR
SIO_010081: TPH_RS01730
subclass of: SO_0000673
so part of: TPH_RS01730
location: 344995..346920
location: region:344995-346920:1
so has part: feature:344995-346920:1:exon

WP_037999129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:344995-346920:1:exon

TPH_RS01735
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01735
old locus tag: Tph_c03410
so part of: sequence
location: 347024..348148
location: region:347024-348148:1
so has part: feature:347024-348148:1:exon
subclass of: SO_0000010

position:347024:1
position: 347024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348148:1
position: 348148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347024-348148:1:exon

TPH_RS01735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01735
old locus tag: Tph_c03410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015738319.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MSRSLQKLLVVISVLLSLFLLAGCSKADKASVAGAVTLKYARGFKIENLADGCKKVTDGNKRVMLLVPRGQKVPSEYKNLPVVYTPVKRVVITSTTQASLMRPLGVLGSIVGVTTEKDQWYIDQVKAGMESGSIQLVGGGMGPLDYDKIVALKPDLVFMSTGGPNDARALQKLEELNIPVAVDNEWLENDPLGRLEWIKFIAAFYDKEQQASDFFDGAEKRIAEITAKVAKVKDKPKVIWGLIYQGKAYVPAADSYVARMIAMAGGDYLFKGNKGTGSRAITFEEYYALGKEADIYIDDTMMNLGRNTIAHITDQSRLMADLPVLKKGNVWGYQPWYWQSLDKTDEVIEDLAAIFHPALFPGYQLKHFLKLPPA
SIO_010081: TPH_RS01735
subclass of: SO_0000673
so part of: TPH_RS01735
location: 347024..348148
location: region:347024-348148:1
so has part: feature:347024-348148:1:exon

WP_015049506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:347024-348148:1:exon

TPH_RS01740
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01740
old locus tag: Tph_c03420
so part of: sequence
location: 348211..349239
location: region:348211-349239:1
so has part: feature:348211-349239:1:exon
subclass of: SO_0000010

position:348211:1
position: 348211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349239:1
position: 349239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348211-349239:1:exon

TPH_RS01740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01740
old locus tag: Tph_c03420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015738320.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron ABC transporter permease
translation: MIAFRLDKRNKMPLLFVLFVAMLILFAVLNIVLGSVRISLHDLVRVLLRQGENAVYDKVVWDIRLPRTLAAILGGAALSVSGLLLQIFFRNPIVDPYVLGVSSGATLIVAILMLTGVVLEMGTIPPYLLSLGAFAGALAVVILIVAVSGRVKQVVTLLVVGLMIGYVCGAGTTILEALAEKENLHNFVLWTMGSFSGFGWEQVSVLAVAGGALLAVSYLLCKPLNALLLGEDYARSMGVNIKSLRVVLVLIASTLTALVTAFAGPVAFIGLAAPHIARLTLGTSDNRALIPATILLGAVITNLCDLLARILFAPVELPISAISSLIGAPIVIVLLMKRRTSL
SIO_010081: TPH_RS01740
subclass of: SO_0000673
so part of: TPH_RS01740
location: 348211..349239
location: region:348211-349239:1
so has part: feature:348211-349239:1:exon

WP_015049507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:348211-349239:1:exon

TPH_RS01745
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01745
old locus tag: Tph_c03430
so part of: sequence
location: 349236..350435
location: region:349236-350435:1
so has part: feature:349236-350435:1:exon
subclass of: SO_0000010

position:349236:1
position: 349236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350435:1
position: 350435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349236-350435:1:exon

TPH_RS01745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01745
old locus tag: Tph_c03430
inference: COORDINATES: protein motif:HMM:NF012235.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MNVMQTKELSVGYDGRTVVADINLEALKGQFICLLGPNGSGKSTILRCLAGLLAPLHGSVFLKDNLLYHMEPKDLSRTMAVVLTERLSPGLITVFEIVAMGRYPYTDFFGHLSREDEEKTWEALCLVGARDLAERYFNELSDGERQKVLIARALVQEPEVIILDEPTTYLDVKHRLEVMEILRELSRRKGITVILSLHEIDIALKSCETVLLVKNGKILASGPPEEILTEEMVAEVYGIESAHFSSCLGGIEMSNSGGAQVFVLAGAGSGAPVYRLLNKYGFSIITGVIHENDIDYYVGRALGGAVVGEQPFEEISLSNVDQAASLGRQAEYIVDAGYPIGSLNRRNVELARRLMAQDKVIYSLRSRQEFEALYGLDGSRPFYCPNIGALAQRLSRREK
SIO_010081: TPH_RS01745
subclass of: SO_0000673
so part of: TPH_RS01745
location: 349236..350435
location: region:349236-350435:1
so has part: feature:349236-350435:1:exon

WP_015049508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349236-350435:1:exon

TPH_RS01750
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: cobN
locus tag: TPH_RS01750
old locus tag: Tph_c03440
so part of: sequence
location: 350461..354177
location: region:350461-354177:1
so has part: feature:350461-354177:1:exon
subclass of: SO_0000010

position:350461:1
position: 350461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354177:1
position: 354177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350461-354177:1:exon

TPH_RS01750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: cobN
locus tag: TPH_RS01750
old locus tag: Tph_c03440
EC number: 6.6.1.2
inference: COORDINATES: protein motif:HMM:TIGR02257.1
GO function: GO:0051116 - cobaltochelatase activity [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cobaltochelatase subunit CobN
translation: MRRIVFLSNMERQYMMMIKARDSLLQEGRLKAEGLTVFLNDIPWGDKWQKTFAASDIVIFTWMGSGLDTDFLKKAADFLADNKITHVMLIAAPGVEDLRYGITPEDRETLQKYLVYGGLENYRNLWLWLGSRFCGEKCDYQLPQPMLWNGIFHPEADRAFTDLREYRRLFCRPDRPTVGILFYRDEWINGDLAYQTALVEAIERQGMNAVAVFSQGAADPELKAPGLTEAIQAYFYEQGRPVIDVLINTIKFSLTATGATDLESLKQLKVPVLQAYTLLRSREEWENSSEGMIPMEIAVSVTMPELDGIIHGVPVAGREYLPDGNAAYLPLAERIDMVARKAGKWARLRHKANSEKKIAVIFHNYPPTNSNIGSAAGLDSIESVRLLLAEMVKRGYHVEHIPDDSRSFMSELVAHTTNDRRFITEEQIQQGEKLSGEQYRQFFDTLAEETRIQLVRDWGKPPGNVFQYDGNLLVPGMLNGNVFITVQPPRGFGEDPSKLYHSPDCAPTHHYLAYYHWIRNIWQADAVIHVGTHGSLEWLPGKGAALSPRCYPDLALGDLPNIYPYWITVVGEGIQAKRRGASCLIGYLSPPMGSAGTYDELAELERLLDEYLHFRQNQPGNTEVMARLIREKVREADLQDDVAEQPEEPFDDYVQRLHAYITDIKNMQIRVGLHVLGSPPRDEGLVEYLLALTNMDNGEIPSLRQAVAAVYGFEYYELLEQSGRMLPDGSKTYGALLEEIQARCREIIELLAGHGFDPEQAGLICQLPWAVEAEQGVRDRLVQVGRYICRTLVPHLEQTRQEITNLLDALEGCYVEPGPAGAPTSGMADVLPTGRNFYGVDPRALPTPVAWEIGKKMGDEVIERYLAEEGRYPENIGIVIWATSNERSHGQCIAEFLYLLGVRPVWQRGSQRVVDLDVIPIEELKRPRIDVTARISGLFRDSMPMCINLMEKAVELVANLNESPEINYVRKHVLQDVQKLKQEGIESDQAWVQASYRIFGDPPGTYGAGISDLLEAKNWETIDDLASVYVRWGGHAYGAKARGVFLPELFSHRMASLDVTIQNEDNREISMLNSDDYNAYHGGMIAAVRSLKGQAPRSYCGDSSDRQKVITRSVQEEIKRLFRGEAINPRFIEGMKQHGYKGAADLANYVAHSYQWDATSDVLEDWMYQKFAEKYAFDKDMQKWMREVNPWALQRILETLLEASQRDLWHADEQTKGELQALYLAIEGELEERSDEQR
SIO_010081: TPH_RS01750
subclass of: SO_0000673
so part of: TPH_RS01750
location: 350461..354177
location: region:350461-354177:1
so has part: feature:350461-354177:1:exon

WP_015049509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350461-354177:1:exon

TPH_RS01755
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01755
old locus tag: Tph_c03450
so part of: sequence
location: 354164..355228
location: region:354164-355228:1
so has part: feature:354164-355228:1:exon
subclass of: SO_0000010

position:354164:1
position: 354164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355228:1
position: 355228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354164-355228:1:exon

TPH_RS01755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01755
old locus tag: Tph_c03450
inference: COORDINATES: protein motif:HMM:NF015983.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: radical SAM protein
translation: MSSGKPLKMLVMSLTGWCNFACRYCYAEEHPHGMMSLDTAIRAVELAAAGGKPFHLQFSGGEPLLNFEVMQGIVRYVQKRRIPAIMQVQTNASLLDRERVSFLRAARVGVGISLDGRPGINDRLRRLPDGKGASLQILRGAEHLAAEGMEIGITCVIANENVSQLAGAVEMAYYLGNVRRIGFDLLRRQGRGKMLTPPPAEAVAEGMLEALRTAERLARFTGRALLISQLERVEILARGTASGFGHCHAMNGEAAFVDAEGRIYACSSLVGDEDFRLGDVWGGIDVKRQQAVAALIWDSMAFCRECPAFSLCGGGCFARWYGSGCVGRAYEAECALKRVCIRWFQQQRGEKIES
SIO_010081: TPH_RS01755
subclass of: SO_0000673
so part of: TPH_RS01755
location: 354164..355228
location: region:354164-355228:1
so has part: feature:354164-355228:1:exon

WP_015049510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354164-355228:1:exon

TPH_RS01760
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01760
old locus tag: Tph_c03460
so part of: sequence
location: 355225..355995
location: region:355225-355995:1
so has part: feature:355225-355995:1:exon
subclass of: SO_0000010

position:355225:1
position: 355225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355995:1
position: 355995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355225-355995:1:exon

TPH_RS01760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01760
old locus tag: Tph_c03460
inference: COORDINATES: protein motif:HMM:NF012993.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbon-nitrogen hydrolase family protein
translation: MKVALLHLDLSGGPQDANLPMLQQALGLAAGEGANWVVTPEMALQGYFFAEKTAQVKIPVQPDASLGPVIQLVIRHRLTLFLGCAERDAETGKCYNSCLVIGSDGSVLGRHRKTRSHKKGAEAWVTEGDKLEPISCPGMKVGIMVCADSWFVDKARVLRDKGAEVLVVLAAWPPTEECGPGDCWERCSMATGLPVWVCNQTGNREAIDFSQAQSVVVADGKALFSYSGLQPAVLLFDWDCERKRVLSDRFKVVAVD
SIO_010081: TPH_RS01760
subclass of: SO_0000673
so part of: TPH_RS01760
location: 355225..355995
location: region:355225-355995:1
so has part: feature:355225-355995:1:exon

WP_015049511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355225-355995:1:exon

TPH_RS01765
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01765
old locus tag: Tph_c03470
so part of: sequence
location: 356027..357136
location: region:356027-357136:1
so has part: feature:356027-357136:1:exon
subclass of: SO_0000010

position:356027:1
position: 356027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357136:1
position: 357136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356027-357136:1:exon

TPH_RS01765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01765
old locus tag: Tph_c03470
inference: COORDINATES: protein motif:HMM:NF014060.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenosylcobinamide amidohydrolase
translation: MLLCTLSTGDTVYRYEKRIVVSFKQPRKVLSTSVLNGGYREDLTAVFNYDCSTGNDTCCSLRAPTYEEHMRLEAKELGFDPETVTGMGTAAQMENAAIKILKHKDLTVTAIVTGGVEVNGGRVGDPADYFQPVDKGILPKPGTINIMLVIDADMPPGTMARALVTCTEAKTAALQELMAGSNYSNGLATGSGTDQTIIIANPASALYLQSAGKHSKLGELIGRSVKSAVKEALLRQTGLSPQMQHSVLRRLKRFGVNEETLWQEYAKDGSGEIERQRFLDCLHRIDRDPRLVTYTSLYVHLLDQLIWELLSGEEAVQAGNELLLLVAGKFGVPGTVIGGPELQDCLQAWADMLVKIVRMNLNVEQRIEH
SIO_010081: TPH_RS01765
subclass of: SO_0000673
so part of: TPH_RS01765
location: 356027..357136
location: region:356027-357136:1
so has part: feature:356027-357136:1:exon

WP_015049512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356027-357136:1:exon

TPH_RS01770
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: cobO
locus tag: TPH_RS01770
old locus tag: Tph_c03480
so part of: sequence
location: 357207..357740
location: region:357207-357740:1
so has part: feature:357207-357740:1:exon
subclass of: SO_0000010

position:357207:1
position: 357207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357740:1
position: 357740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357207-357740:1:exon

TPH_RS01770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: cobO
locus tag: TPH_RS01770
old locus tag: Tph_c03480
EC number: 2.5.1.17
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011345485.1
GO function: GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cob(I)yrinic acid a,c-diamide adenosyltransferase
translation: MSERKGLIIVHTGNGKGKTTAALGMGMRAWGQGLKVLVIQFIKGNRIYGELKTIARLGPDFEIRQMGEGFIKGPNDDAVAEHRRAAEAALQAAGTEISSEKWDLVILDEINYAISYGLVPLDAVLGLLDQKPPSLHLVLTGRDASPEVIERADLVTEMREVKHPLKNGIKAQKGIEF
SIO_010081: TPH_RS01770
subclass of: SO_0000673
so part of: TPH_RS01770
location: 357207..357740
location: region:357207-357740:1
so has part: feature:357207-357740:1:exon

WP_015049513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357207-357740:1:exon

TPH_RS01775
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01775
old locus tag: Tph_c03490
so part of: sequence
location: 357832..358671
location: region:357832-358671:1
so has part: feature:357832-358671:1:exon
subclass of: SO_0000010

position:357832:1
position: 357832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358671:1
position: 358671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357832-358671:1:exon

TPH_RS01775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01775
old locus tag: Tph_c03490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015738583.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MLVIKDLVKKYGDITAVDHLNLEIGKGEFFGLLGPNGAGKTTTVRMISTLTPMTSGSISIDGQSPDRNLTSVKLKIGVVPQHNNLESEMTAWENLEMHGRLYNMPKAIRRKRIVELLEFTELSDRAGDLVKTFSGGMKRKLMIARALMHRPELLLLDEPTVGLDPAVRRKIWDLLKSLSSNGLTVLLTTHYIEEAEILCHRVGLMDKGKLVELGSPDKLIEKVGKFVVEFFEDGETKREFFETRDDAVVFASKLHGSVKIRSSNLEDVFIKFTNRRVGD
SIO_010081: TPH_RS01775
subclass of: SO_0000673
so part of: TPH_RS01775
location: 357832..358671
location: region:357832-358671:1
so has part: feature:357832-358671:1:exon

WP_015049514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357832-358671:1:exon

TPH_RS01780
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01780
old locus tag: Tph_c03500
so part of: sequence
location: 358671..359405
location: region:358671-359405:1
so has part: feature:358671-359405:1:exon
subclass of: SO_0000010

position:359405:1
position: 359405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358671-359405:1:exon

TPH_RS01780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01780
old locus tag: Tph_c03500
inference: COORDINATES: protein motif:HMM:NF013245.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MAGFTCILWQEYVLFKRNFWNITISNMIAPTLYLIAFGWGLGGGMRIDGSDYISFVIPGIIALTTMTASFSAVGNAINISRLYEKTFEEFMVAPISMLVYAAGKITAGALRGIYSGFLIIILAFVFGVRVHLNGYFLLVMILNCLAFSAIGFTAGIFIKSHADMAKFTSFIITPMAFLCGTFFPLDKIPHVLKVFIWLLPLTHTSLGLRNSGGNIGDMILHIVILLLYFLIILAIGVVHCKKTE
SIO_010081: TPH_RS01780
subclass of: SO_0000673
so part of: TPH_RS01780
location: 358671..359405
location: region:358671-359405:1
so has part: feature:358671-359405:1:exon

WP_015049515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358671-359405:1:exon

TPH_RS14595
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS14595
pseudo: true
so part of: sequence
location: complement(359444..>359630)
location: region:359444-359630:-1
so has part: feature:359444-359630:-1:exon
subclass of: SO_0000010

position:359444:-1
position: 359444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359630:-1
position: 359630
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359444-359630:-1:exon

TPH_RS14595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS14595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012032558.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: TPH_RS14595
subclass of: SO_0000673
so part of: TPH_RS14595
location: complement(359444..>359630)
location: region:359444-359630:-1
so has part: feature:359444-359630:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:359444-359630:-1:exon

TPH_RS01790
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01790
old locus tag: Tph_c03510
so part of: sequence
location: 360341..361228
location: region:360341-361228:1
so has part: feature:360341-361228:1:exon
subclass of: SO_0000010

position:360341:1
position: 360341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361228:1
position: 361228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360341-361228:1:exon

TPH_RS01790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01790
old locus tag: Tph_c03510
inference: COORDINATES: protein motif:HMM:NF015949.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF364 domain-containing protein
translation: MPEEELRRLDMVRETIRELRNLGIRGTLYSVVITRVGPWTLSYIKYDDGTIGCGCANNEAEREEIPDDVSFIKDLLNLNTYEVVDRLESFGDSVFINSLRTSIASALSYKLMSDVGLLKKEGYDAETFIAPNLPLFDPSKFVQPSDIVAMVGFHMTVTPLCADIAKEVLVTELMDLKELSVIELGVREKSNVKIFPADKSKEILSRADVVYITGETVVNGTIDEILEFSKNARTRIIYGPTSAFYPKVLFERGVDVSLPMIFPNTPDFRRRFVLSRGNWYFMRDVKQLLIRRSRT
SIO_010081: TPH_RS01790
subclass of: SO_0000673
so part of: TPH_RS01790
location: 360341..361228
location: region:360341-361228:1
so has part: feature:360341-361228:1:exon

WP_015049516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360341-361228:1:exon

TPH_RS01795
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01795
old locus tag: Tph_c03520
so part of: sequence
location: 361395..362948
location: region:361395-362948:1
so has part: feature:361395-362948:1:exon
subclass of: SO_0000010

position:361395:1
position: 361395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362948:1
position: 362948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361395-362948:1:exon

TPH_RS01795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01795
old locus tag: Tph_c03520
inference: COORDINATES: protein motif:HMM:NF012706.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MKRLLAFLSCLMAVVLLAGCGDKTTVSEKKLTESQQVLKVAIATDVNTWDITQFPDGDGRFVWSQIYETLVRLDEDLNMIPGLAESWEPQDNGKVWIFHLRKGVKFHDGTPFTAEAVKYSYGERAYVTKVKTLEFEDIEVVDDYTVKFICKKSIPLPTYLTHVAWPIVSPTSIDSQGNFIKPIGTGPFKLSKHIEAQEIVLERNDDYWGEKPKLEKVIFKIIPDASTQVLALNSGDVDMLIKVPESEVKNLEKDPDIKVYRKLTTFTDFLHFNCKREPFNDVNVRKAVAYAVDTESIVKNILDGVGVAAKGRPYSPVMLYSAPDLPLYSPDLEKAKSFLAAAGYRDTNGDGIVEKGGKPLKIDLLVSPSWSARQIKEAEAIQDQLARVGFAVEIKQLESGALTRLEDEGNFGVILRTGFYVWGPYPHHVKIHHSKNYKSHYQNGEYDRLVEQGESTVDEVKKQQIYERIQRMVLEELPAFYIVHEEKVVAVRENVQGFQITAEDPWLELKGVYLAAK
SIO_010081: TPH_RS01795
subclass of: SO_0000673
so part of: TPH_RS01795
location: 361395..362948
location: region:361395-362948:1
so has part: feature:361395-362948:1:exon

WP_015049517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361395-362948:1:exon

TPH_RS01800
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01800
old locus tag: Tph_c03530
so part of: sequence
location: 363002..364000
location: region:363002-364000:1
so has part: feature:363002-364000:1:exon
subclass of: SO_0000010

position:363002:1
position: 363002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364000:1
position: 364000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363002-364000:1:exon

TPH_RS01800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01800
old locus tag: Tph_c03530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015051569.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MAIAKAVLDVTRNRGRFFVLKYIARRQLLTIVVVLGVTILTFSIMHLAPGDPAEMIAIARYGMENLTQEDIEQIRKAEGLDAPVYVQYARWLSHVVRGDFGRSLITGEPVLEEILTRFPATLKLALAAMIVSLLIAIPVGIVSAVKPYSLSDYLSMTGALIGVCMPNFWLGLLLILLFSVYLGLFPVCGYGGLKHIVLPALTLGSGMAAITTRLIRSSMLEVLKQDYITTARAKGLSEKSIIARHALKNAFIPVITVIGLQFGHLLEGTVIVETIFAWPGIGKLLVDSIFARDFALIQGCVLFFAVVFVIINLLVDISYVYLDPKIRYEKEG
SIO_010081: TPH_RS01800
subclass of: SO_0000673
so part of: TPH_RS01800
location: 363002..364000
location: region:363002-364000:1
so has part: feature:363002-364000:1:exon

WP_015049518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363002-364000:1:exon

TPH_RS01805
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01805
old locus tag: Tph_c03540
so part of: sequence
location: 364003..364875
location: region:364003-364875:1
so has part: feature:364003-364875:1:exon
subclass of: SO_0000010

position:364003:1
position: 364003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364875:1
position: 364875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364003-364875:1:exon

TPH_RS01805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01805
old locus tag: Tph_c03540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011344052.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MNGVVVKAQPRIYSLARFSRNKTAATGLVIILFLVFVAVFAPVLAPHHPYEQNLEKALLPPCGEYPFGTDDLGRCVFSRIIFGTRISLQIGVTVTAITASIGVTLGLLAGYYGRLVDEIIMRLVDILLAFPGLVLALAIAGLLGPGLFNVMLALAAVGWMGYARVVRGAVLAVKEKEFVESAKAIGAKDLYILLRYVLPNVSAPVIVMATLGVGYVILAAAGLSFLGLGVQPPTPDWGAMLNSGKAFMRTAPHLTVFPGLAIMITVMAFNFLGDGLRDLLDPRLKEKKIE
SIO_010081: TPH_RS01805
subclass of: SO_0000673
so part of: TPH_RS01805
location: 364003..364875
location: region:364003-364875:1
so has part: feature:364003-364875:1:exon

WP_015049519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364003-364875:1:exon

TPH_RS01810
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01810
old locus tag: Tph_c03550
so part of: sequence
location: 364889..365887
location: region:364889-365887:1
so has part: feature:364889-365887:1:exon
subclass of: SO_0000010

position:364889:1
position: 364889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365887:1
position: 365887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364889-365887:1:exon

TPH_RS01810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01810
old locus tag: Tph_c03550
inference: COORDINATES: protein motif:HMM:NF012235.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MNRLLSIRNLRTVFHTEEGLVKVADDINLDIAEGRTVGLIGETGCGKSVLGLSILRLLPPNVSIEGKIYYKGQDILQLGEEQMRRLRGKEIALIPQSPSTSLNPVLKIGVQITEALQLHRKLTREKAEGATLELLRFLNLPEPDNKVKEYPHQLSGGMKQRVLAAIGMAGKPSLLIADEPTKGLDAIIRIQVVEVLRRLTKETGAAMLLITHDLKVAASLCDEIAVMYAGEIVEHGPAERVLKHPGHPYTRGLLASLPDNGLKPIPGSSPSLVNLPAGCKFHPRCAGAREVCAEKRPPLIKTNGCLVRCMFVDQGGESQESFCHRGLQKEAG
SIO_010081: TPH_RS01810
subclass of: SO_0000673
so part of: TPH_RS01810
location: 364889..365887
location: region:364889-365887:1
so has part: feature:364889-365887:1:exon

WP_015049520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364889-365887:1:exon

TPH_RS01815
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01815
old locus tag: Tph_c03560
so part of: sequence
location: 365832..366755
location: region:365832-366755:1
so has part: feature:365832-366755:1:exon
subclass of: SO_0000010

position:365832:1
position: 365832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366755:1
position: 366755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365832-366755:1:exon

TPH_RS01815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01815
old locus tag: Tph_c03560
inference: COORDINATES: protein motif:HMM:NF012235.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MENLRKVFVTGVFRKRLVNAVDGVSFTISSGETLGLVGESGCGKSTLARVVLGLIPPSGGRIFFHGQEITEARAAELKKVRRKMQIIFQHPESALNPRMKIYDSLVEPMRIHRLVNNRREEKKKAEELIELVGLHKEHLDRYPHELSGGQIQRVVLARILSLQPEFIVADEPTSMLDVSVQAQMLNLFKEIQKKFNISYLFISHDLEVVRWMSDWVAVMYAGSIVEIGPVEKVCENPRHPYTLTLVSAFYAPANNVSEFTKVTDFKAARHLSGCKFYPFCLEANSVCKKKPDLKEVEKNHFAACWHL
SIO_010081: TPH_RS01815
subclass of: SO_0000673
so part of: TPH_RS01815
location: 365832..366755
location: region:365832-366755:1
so has part: feature:365832-366755:1:exon

WP_015049521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365832-366755:1:exon

TPH_RS01820
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01820
old locus tag: Tph_c03570
so part of: sequence
location: 366781..367380
location: region:366781-367380:1
so has part: feature:366781-367380:1:exon
subclass of: SO_0000010

position:366781:1
position: 366781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367380:1
position: 367380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366781-367380:1:exon

TPH_RS01820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01820
old locus tag: Tph_c03570
inference: COORDINATES: protein motif:HMM:NF014414.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MLTHREFFNNLAFEWDQRVKHDHDKLQEIINLVNIFQGASILDVGCGTGVLVPYIIDKIGKSGNIVGLDFAEKMLEKAREKFPEKDFPNVSFVCQDIMECDFKKIFDFVICYSVFPHFFDKKQVVKKMASFLKPEGKLIICHSESREKINKMHASLDKPVSSDALPSGSEVSEYMRCAGLKVEIVVDDDEKYVVMGVKD
SIO_010081: TPH_RS01820
subclass of: SO_0000673
so part of: TPH_RS01820
location: 366781..367380
location: region:366781-367380:1
so has part: feature:366781-367380:1:exon

WP_015049522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366781-367380:1:exon

TPH_RS15310
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15310
old locus tag: Tph_c03580
so part of: sequence
location: complement(367630..367788)
location: region:367630-367788:-1
so has part: feature:367630-367788:-1:exon
subclass of: SO_0000010

position:367630:-1
position: 367630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367788:-1
position: 367788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367630-367788:-1:exon

TPH_RS15310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15310
old locus tag: Tph_c03580
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDGYTPDASSAVHLCRGLLQLRNRAAGGREKKKLVSITGRLKQRKDSPDPDS
SIO_010081: TPH_RS15310
subclass of: SO_0000673
so part of: TPH_RS15310
location: complement(367630..367788)
location: region:367630-367788:-1
so has part: feature:367630-367788:-1:exon

WP_015049523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367630-367788:-1:exon

TPH_RS01825
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01825
old locus tag: Tph_c03590
so part of: sequence
location: complement(367805..369232)
location: region:367805-369232:-1
so has part: feature:367805-369232:-1:exon
subclass of: SO_0000010

position:367805:-1
position: 367805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369232:-1
position: 369232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367805-369232:-1:exon

TPH_RS01825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01825
old locus tag: Tph_c03590
EC number: 2.1.1.90
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011392723.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methanol-cobalamin methyltransferase subunit beta
translation: MEYKPVKTFDELAVKSLDDFVYGIAPHPVTAKNGMVIGGGTVYPEINLTLPPMNINESTMPEVRRQYAEMIEGILKRAKSLYAPGIIVEVELLPETTMTPQWGIEINKILRDKMYEYENKYGLKSLLRCTPNDTREIVRPPLMRRGELLENMFTTFEKCAEDGADILSIESTGGKEVHDEGLVTCDIRKVVFALGVLGVRDMRFLWSRIVEIAGRTGSIAGGDTACGFANTALALAEQEMIPRVFAAVDRVATIPRSLVAFEMGATGPDKDCGYEGPYMKAIAGVPISMEGKTAACAHLSAVGNIAACVCDMWSNESVQNVKLLSAPAPVVSTEQLIYDCRLMNEAAADGREFALKMRDWLADSDSSLDPQAYVLRPDVVLEISGELVKEKDPFLATKKAAALAVEVIKRGVEKGELNLSAREKKWLDIISSQLETIPDDEEKFWFELQKELDLNKWRPEEYDLEVAAAKAASAK
SIO_010081: TPH_RS01825
subclass of: SO_0000673
so part of: TPH_RS01825
location: complement(367805..369232)
location: region:367805-369232:-1
so has part: feature:367805-369232:-1:exon

WP_015049524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367805-369232:-1:exon

TPH_RS01830
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01830
old locus tag: Tph_c03600
so part of: sequence
location: complement(369321..369980)
location: region:369321-369980:-1
so has part: feature:369321-369980:-1:exon
subclass of: SO_0000010

position:369321:-1
position: 369321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369980:-1
position: 369980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369321-369980:-1:exon

TPH_RS01830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01830
old locus tag: Tph_c03600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015051800.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: corrinoid protein
translation: MAGFEDLSQAVLEGDEARVVEVTKSLLDSGVDPLDVINKGLITGMDRVGVLFKNNEMFVPEVLMSAKAMNAGVEVVKEKQQAFDMPSLGKVVIGTVRGDLHDIGKNLVAMMMESSGFTVYNLGVDIEPAKFVEAVKEYRPDIVAMSALLTTTMMNMKETIDALKEAGLKDKVKVIIGGAPITQEFADEIGADGYAPDAASATELCKQLVEGREKVGVPA
SIO_010081: TPH_RS01830
subclass of: SO_0000673
so part of: TPH_RS01830
location: complement(369321..369980)
location: region:369321-369980:-1
so has part: feature:369321-369980:-1:exon

WP_015049525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:369321-369980:-1:exon

TPH_RS01835
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01835
old locus tag: Tph_c03610
so part of: sequence
location: complement(370079..370882)
location: region:370079-370882:-1
so has part: feature:370079-370882:-1:exon
subclass of: SO_0000010

position:370079:-1
position: 370079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370882:-1
position: 370882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370079-370882:-1:exon

TPH_RS01835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01835
old locus tag: Tph_c03610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011392721.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyltetrahydrofolate cobalamin methyltransferase
translation: MLIVGELINTSRKPIKEAIERGDAAYIRDIAVRQAEAGADYIDVNCGTLIHNEPETMAWLANIVREAVNVPLCIDSPNPEALEAGLKLATKGRPMLNSITAEPDRFEAVLPIVKNFKAKVVALCMDEEGIPSTAEKRIEIVRKLVEDLTAAGIEREDIYIDPLVKPISTSDQAGAELIAAVGFIRENFPGVHIICGLSNVSFGLPNRRVLNQAFMVQLMTVGMDSYILDPLDREMMGFFYASKALLGKDPFCTDYLKAHRRGLYRRD
SIO_010081: TPH_RS01835
subclass of: SO_0000673
so part of: TPH_RS01835
location: complement(370079..370882)
location: region:370079-370882:-1
so has part: feature:370079-370882:-1:exon

WP_015049526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:370079-370882:-1:exon

TPH_RS01840
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01840
old locus tag: Tph_c03620
so part of: sequence
location: 371107..371925
location: region:371107-371925:1
so has part: feature:371107-371925:1:exon
subclass of: SO_0000010

position:371107:1
position: 371107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371925:1
position: 371925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371107-371925:1:exon

TPH_RS01840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01840
old locus tag: Tph_c03620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015051082.1
note: Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: corrinoid protein
translation: MYNLYRLVGMKVTSGLPARDAVEEKGTAASDCRLLLHFTVCGTIGGEIERKAGDTLSSRTRVFHQIISAILEGEANGVISSINSGLQMGMSAEEILEEALIPATIQTLDRFQGADFYIPDVINASHAIEAGLLALKPYTKRNPQKRKKIVIGTVAGDIHDIGKNLVALSLEYAGFEVVDLGVNVSRAEFVRAVEWHRPEILGLSALLTTTMGEMAGVIEALEKSHLRRRVKVMVGGGPVTREFAESIGADAYGSSAREAISIARSLVSGGEG
SIO_010081: TPH_RS01840
subclass of: SO_0000673
so part of: TPH_RS01840
location: 371107..371925
location: region:371107-371925:1
so has part: feature:371107-371925:1:exon

WP_236608810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371107-371925:1:exon

TPH_RS01845
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01845
old locus tag: Tph_c03630
so part of: sequence
location: complement(372001..373323)
location: region:372001-373323:-1
so has part: feature:372001-373323:-1:exon
subclass of: SO_0000010

position:372001:-1
position: 372001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373323:-1
position: 373323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372001-373323:-1:exon

TPH_RS01845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01845
old locus tag: Tph_c03630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011392719.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PocR ligand-binding domain-containing protein
translation: MQALSLTKGRGDLQLKKKLEKELFQRLLNSFSYATKMFSAITDLEGNCILSSEHGDCEFCRLVKSSPSGVARCRRSYAQAGEQALKWKEPYIYKCHAGLISWAYPFYYKGNHIGNFICGQVLMWQPTELCADRIRNLACEIGQDPEALLHAFNAVRPVSPLEIQAAADLVFILTGYVAQSGTEIFDFQQKLRKVSSWIWGENKKQKDAGAGSVKGRAAQDMVNLGSRLFAEIRRADIEAAKKLLEQLILQIFVQSKGQLEVIKGRSLEFLSMLTRMSTENGVKFGEAIRLSDLKLKEIDDADTVEKAVLWLLSVGNAFIALMAKKNSGERDDLIKRVVDYIDKNYSSPNLSVREIAKAAYISPAYLGQLFKKRMGCSLTEHINRVRVEQAKHLLRQQDLTIESIAVQTGFKDRSYFCRIFKKITGMSPNEYRKRNFSPLR
SIO_010081: TPH_RS01845
subclass of: SO_0000673
so part of: TPH_RS01845
location: complement(372001..373323)
location: region:372001-373323:-1
so has part: feature:372001-373323:-1:exon

WP_015049528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:372001-373323:-1:exon

TPH_RS01850
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01850
old locus tag: Tph_c03640
so part of: sequence
location: 373971..374942
location: region:373971-374942:1
so has part: feature:373971-374942:1:exon
subclass of: SO_0000010

position:373971:1
position: 373971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374942:1
position: 374942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373971-374942:1:exon

TPH_RS01850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01850
old locus tag: Tph_c03640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019907474.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MRILVTGGAGFIGSHVVDGLLEAGHEVAVVDDLSTGKRENVNPKAAFFRMDVCDPELERVFREGRFDYVNHHAAQIDVRRSVADPAADARTNILGLLNVLELCRRYGVRGVVFASSGGVVYGEPQKFPVSEKHPKGPLSPYGVSKLTSEFYLAYYAEVHGLPYVALRYGNVYGPRQDPHGEAGVVAIFGLKMLEGASPVIYGDGEQLRDYVYVGDVVRANLLALRYLSGGRAKCGSGGCAINDFAFNIGTGVGTSVNRLFALLKELTGFAGEPGYGPERPGELRRIWLDPARARAELGWEPEVELRDGLRLTVEHLQGSRRPV
SIO_010081: TPH_RS01850
subclass of: SO_0000673
so part of: TPH_RS01850
location: 373971..374942
location: region:373971-374942:1
so has part: feature:373971-374942:1:exon

WP_015049529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373971-374942:1:exon

TPH_RS01855
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01855
old locus tag: Tph_c03650
so part of: sequence
location: complement(374939..376072)
location: region:374939-376072:-1
so has part: feature:374939-376072:-1:exon
subclass of: SO_0000010

position:374939:-1
position: 374939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376072:-1
position: 376072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374939-376072:-1:exon

TPH_RS01855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01855
old locus tag: Tph_c03650
inference: COORDINATES: protein motif:HMM:NF025644.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DHHW family protein
translation: MKQREIYHGTALMLLLYIGGLALLNLLTPDRVFSASENRMLEQAPRFSPAKLLEGRFTRDYEKYVADQFPLRDVWIGVKTDLERMAGKRDSNGVYLGKDGYLLQGFKAPQPEILQKRVAALNSFAASLPEVPVYLMLVPNSVEILKEKLPPYAPTDGQLGCLQQIRDSLDRRIGYVDVYDTLYSHRKEEIYYKTDHHWTTRGAYYAYRKLGEVMGFTPYDRSRFRVEKVTDSFYGSLSSKSGFRHLRPDSIELYLPRVPERYRVHYCEGNRVAATLYFRENLGKKDKYAVFLNGNHPLIKITTAAENDKRLLLVKDSYANCLIPFLTGHFREIYVVDLRYYDEDVRTLIRSGGIQDVLFLYNVHTFCEEPSPLDALL
SIO_010081: TPH_RS01855
subclass of: SO_0000673
so part of: TPH_RS01855
location: complement(374939..376072)
location: region:374939-376072:-1
so has part: feature:374939-376072:-1:exon

WP_015049530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374939-376072:-1:exon

TPH_RS01860
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01860
old locus tag: Tph_c03660
so part of: sequence
location: complement(376330..377736)
location: region:376330-377736:-1
so has part: feature:376330-377736:-1:exon
subclass of: SO_0000010

position:376330:-1
position: 376330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377736:-1
position: 377736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376330-377736:-1:exon

TPH_RS01860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01860
old locus tag: Tph_c03660
inference: COORDINATES: protein motif:HMM:NF015049.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBOAT family protein
translation: MVFSSLVFIFSFLPLTLLAYYLAPGFLRNPVLLLASLLFYSWGEPKYVLIMAFTTAANYALSILIDRYRGRRVLRRALFLAALAADLGILCFFKYSGFLADNLKALCGLELALPDLPLPLGISFYTFQTMSYVIDVYLGKVRVQRNIISFGTYITMFPQLVAGPIVKYGEIAGQLAGRKESLQMFGEGAGIFLIGLAKKVLLANNIGMLWDTVKAAPPGELSVLSSWLGITAFAFQIYFDFSGYSDMAVGLGKMFGFNLPINFNYPYISRSVTEFWRRWHISLGSWFREYVYIPLGGNRKGMLKQYRNILIVWFLTGLWHGASWNFVLWGLYYGAFLAVEKTFLLRRLEGLPRAVGHIYTLFVVIVGWVLFEFETIPRAAGFLAAMLGPGAAYLWDRNALYYLYTNGILLLVLAICATPLPGRAALKIRRRLGAAGAAAAPAAYLILAFLCTAYLVNESYNPFLYFRF
SIO_010081: TPH_RS01860
subclass of: SO_0000673
so part of: TPH_RS01860
location: complement(376330..377736)
location: region:376330-377736:-1
so has part: feature:376330-377736:-1:exon

WP_015049531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376330-377736:-1:exon

TPH_RS01865
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01865
old locus tag: Tph_c03670
so part of: sequence
location: complement(377769..378302)
location: region:377769-378302:-1
so has part: feature:377769-378302:-1:exon
subclass of: SO_0000010

position:377769:-1
position: 377769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378302:-1
position: 378302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377769-378302:-1:exon

TPH_RS01865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01865
old locus tag: Tph_c03670
inference: COORDINATES: protein motif:HMM:NF025628.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4358 domain-containing protein
translation: MRKRRFEKGLTALQMHLRRTLLLAAAAAAIVALTLGGTAGCSSQKEAAADPTVEEIVARIAAAVDLSRMQEGDAGTLKKLYGIDAADLEGFALYTAPTNISADEILVVKLKDPDAAGAVQEKMEKRVADRAARFKDYLPQEYYKIEHHVLETRGSCLLLAIAEDADKIAAAFDESFR
SIO_010081: TPH_RS01865
subclass of: SO_0000673
so part of: TPH_RS01865
location: complement(377769..378302)
location: region:377769-378302:-1
so has part: feature:377769-378302:-1:exon

WP_148275818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:377769-378302:-1:exon

TPH_RS01870
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01870
old locus tag: Tph_c03680
so part of: sequence
location: complement(378341..379207)
location: region:378341-379207:-1
so has part: feature:378341-379207:-1:exon
subclass of: SO_0000010

position:378341:-1
position: 378341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379207:-1
position: 379207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378341-379207:-1:exon

TPH_RS01870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01870
old locus tag: Tph_c03680
inference: COORDINATES: protein motif:HMM:NF024863.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GDSL-type esterase/lipase family protein
translation: MTGKTRKKWATLNPRGLLLTLLIPAVIAAAAAAAGRYPWKPDGPLPPSTPAYAGSENSAQKEEPAVISGQGEEPPPAGAKKAVGDGEQGKVAEAPPSPNGKETAPPTGSGRVDYRTVFERDLFMGDSITEGLSFYEYLDEANVIAELGLTLAKAGKQLDRVAGANPERVFLLFGTNDISPTVTDEEFLEDYEELLRALQTRVPQARIYVQSLLPVSPQAQVERPYLNGSRIERLNASLKKLAASRGVGYLDLTPLIREAGRDLHEPDGIHLKRDFYPLWLNRLIEQAE
SIO_010081: TPH_RS01870
subclass of: SO_0000673
so part of: TPH_RS01870
location: complement(378341..379207)
location: region:378341-379207:-1
so has part: feature:378341-379207:-1:exon

WP_015049533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378341-379207:-1:exon

TPH_RS01875
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01875
old locus tag: Tph_c03690
so part of: sequence
location: 379718..380176
location: region:379718-380176:1
so has part: feature:379718-380176:1:exon
subclass of: SO_0000010

position:379718:1
position: 379718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380176:1
position: 380176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379718-380176:1:exon

TPH_RS01875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01875
old locus tag: Tph_c03690
inference: COORDINATES: protein motif:HMM:NF017648.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CtsR family transcriptional regulator
translation: MENKPLVNAIESYLKSLLSKSSDGWIEVRRKEIAELFDCVPSQITYVLNTRFSVRRGYLVESRRGGGGYVKIRSLFAAPEKLPEPDGAVEADDAAGGARQALLSLARQGAFTRREFLILSAVLEVLEEGLSGKRGGELFLRVLRRLAAEGFF
SIO_010081: TPH_RS01875
subclass of: SO_0000673
so part of: TPH_RS01875
location: 379718..380176
location: region:379718-380176:1
so has part: feature:379718-380176:1:exon

WP_028991156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379718-380176:1:exon

TPH_RS01880
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01880
old locus tag: Tph_c03700
so part of: sequence
location: 380195..380704
location: region:380195-380704:1
so has part: feature:380195-380704:1:exon
subclass of: SO_0000010

position:380195:1
position: 380195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380704:1
position: 380704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380195-380704:1:exon

TPH_RS01880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01880
old locus tag: Tph_c03700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011391707.1
GO function: GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UvrB/UvrC motif-containing protein
translation: MMFCQECQKRPATVHVTRIVNNVKTELHLCQECAKHHEGLAFSFNFEPNFSIHKFLAGLLGGSPLEMAPLQSPGCPNCGLSLARFGEIGRFGCSRCYQAFGDGLEPLLRRLQGASRHAGKVPRRVGGKLGVRREIEKLREELQQAIRQEAYERAAELRDRIRSLEQGLE
SIO_010081: TPH_RS01880
subclass of: SO_0000673
so part of: TPH_RS01880
location: 380195..380704
location: region:380195-380704:1
so has part: feature:380195-380704:1:exon

WP_015049535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380195-380704:1:exon

TPH_RS01885
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01885
old locus tag: Tph_c03710
so part of: sequence
location: 380729..381790
location: region:380729-381790:1
so has part: feature:380729-381790:1:exon
subclass of: SO_0000010

position:380729:1
position: 380729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381790:1
position: 381790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380729-381790:1:exon

TPH_RS01885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01885
old locus tag: Tph_c03710
EC number: 2.7.14.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011391708.1
GO function: GO:0016301 - kinase activity [Evidence IEA]
GO process: GO:0046314 - phosphocreatine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein arginine kinase
translation: MSIENALKNPYTKWMEGKGPYASIVISSRVRLARNLVDYPFPHVQNRDAGKKVAFLVRDAVLDPRFRQQVGGVDFVFLNELSPLDRMVLVEKHLISPQHAAEEGPERGLALSDDEAVSIMVNEEDHLRIQVLFPALQLEEAWELASGVDDALESRLEYAFDERYGYLTCCPTNVGTGLRASVMVHLPAVAMTNQANRLFTALSKLGFVVRGLYGEGTEARGNLFQVSNQITLGPSEEEIIGNLASVCRQIIEQEEMAREKLRKDALTQLEDMVFRSYGILSNAYIISSEEAMVHLSNVRLGLDMGLLRNVNIRKLNELLVEIRPAFLQKLAGEEIDAFKRDFKRAEIIRSALA
SIO_010081: TPH_RS01885
subclass of: SO_0000673
so part of: TPH_RS01885
location: 380729..381790
location: region:380729-381790:1
so has part: feature:380729-381790:1:exon

WP_015049536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380729-381790:1:exon

TPH_RS01890
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01890
old locus tag: Tph_c03720
so part of: sequence
location: 381817..384279
location: region:381817-384279:1
so has part: feature:381817-384279:1:exon
subclass of: SO_0000010

position:381817:1
position: 381817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384279:1
position: 384279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381817-384279:1:exon

TPH_RS01890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01890
old locus tag: Tph_c03720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015739904.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent Clp protease ATP-binding subunit
translation: MLYGRFTERAQKVLYLAQDEARRLGHPAVGTEHLLLGLLREGEGIAARALQALGVDLDKVRKEVEKIVAPGEARLIGEVGLTPRAKKVLELAQEEGRRQGVSYVGTEHILLGLIREGEGVAARILLAQGLSLDKVRRQVLMLLGGIGPVSPGHPQAGASRRASQTPTLDELGRDLTQLAREGKLDPVIGREQEIERVIQVLSRRTKNNPCLIGEPGVGKTAIAEGLAQRIVENKVPEILADKRVVTLDMSSVVAGTKYRGEFEERLRKVIDEIRNAGNIILFIDEVHTLVGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVMVGEPTVEETIEILRGLRDRYEAHHRVKITDGALKAAARLSDRYITDRFLPDKAIDLMDEAASRVRLKAYTAPPAVKELEEKLERLQKEKESAVVSQEFEKAASLRDQEQQVREELEKIKSNWVQRKELDQSIVTDEDIAAIISSWTGIPVSKLQEEESERLLRMEEILHQRVIGQDEAVKAVARAMRRSRAGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGDEEAMVRFDMSEYMEKHTVSRLLGAPPGYVGYEEAGQLTEAVRRRPYSVVLFDEIEKAHPDIFHVLLQVMEDGRLTDAKGRTVDFRNTVIIMTSNVGANLIKREHRLGFKAGERQDELDYEAMKERITDELRRTFRPEFLNRVDEIIVFHPLNEEHMKKIVGLMLKNISKRIAEYGLHLEFTKEAEELLVKKGYDPTFGARPLRRVIQRMVEDELSEEMLAGKFKAGDAVLVDAGEDKLVFKPKERDAVGG
SIO_010081: TPH_RS01890
subclass of: SO_0000673
so part of: TPH_RS01890
location: 381817..384279
location: region:381817-384279:1
so has part: feature:381817-384279:1:exon

WP_015049537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381817-384279:1:exon

TPH_RS01895
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01895
old locus tag: Tph_c03730
so part of: sequence
location: complement(384574..385113)
location: region:384574-385113:-1
so has part: feature:384574-385113:-1:exon
subclass of: SO_0000010

position:384574:-1
position: 384574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385113:-1
position: 385113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384574-385113:-1:exon

TPH_RS01895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01895
old locus tag: Tph_c03730
inference: COORDINATES: protein motif:HMM:NF019468.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1648 domain-containing protein
translation: MDQKGIWQKLAEHYPLWWEWVVLILIVFSFWYPAAHYAELPAQIPTHFGPSGAPDAWSPKSPVSVYLAPLILAGTYILMTALNGWFALAPDPRKLINLPKKRLEKMTPQQLESIRGETIKGLFVLKFLLAAMSADLSYESTRVALGLRNGLNPVWLWSFFGAIMLSSLYFTVRLLKLSK
SIO_010081: TPH_RS01895
subclass of: SO_0000673
so part of: TPH_RS01895
location: complement(384574..385113)
location: region:384574-385113:-1
so has part: feature:384574-385113:-1:exon

WP_015049538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:384574-385113:-1:exon

TPH_RS01905
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01905
old locus tag: Tph_c03740
so part of: sequence
location: 385867..386376
location: region:385867-386376:1
so has part: feature:385867-386376:1:exon
subclass of: SO_0000010

position:385867:1
position: 385867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386376:1
position: 386376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385867-386376:1:exon

TPH_RS01905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01905
old locus tag: Tph_c03740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011392726.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitroreductase family protein
translation: MDALEAIRSRRSIRNYSGKPVSRDLVKKLLEAAMCAPSAHNQQPWQFVVIEERETLDRIPDFHPHSRMLKTAPLAILVCGDGSLFKDADFWPQDCAAATQNVLLAARALGLGTVWMGVYPKENLVSGLRSLFGIPQSVIPFSLIAVGYPAEEKPPVSRYDEGRVHWGKW
SIO_010081: TPH_RS01905
subclass of: SO_0000673
so part of: TPH_RS01905
location: 385867..386376
location: region:385867-386376:1
so has part: feature:385867-386376:1:exon

WP_015049539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385867-386376:1:exon

TPH_RS01910
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01910
old locus tag: Tph_c03750
so part of: sequence
location: 386536..387396
location: region:386536-387396:1
so has part: feature:386536-387396:1:exon
subclass of: SO_0000010

position:386536:1
position: 386536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387396:1
position: 387396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386536-387396:1:exon

TPH_RS01910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01910
old locus tag: Tph_c03750
EC number: 4.2.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009052008.1
GO function: GO:0016829 - lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fumarate hydratase
translation: MREIDVELIAGEVARLCREANCDLPPDVLRALEEARLKEESPQGRRILEEICENAAIAREERIPLCQDTGIALVFVEIGQEVHLTGGSLSEAINRGVARGYREGYLRKSVVADPLRRRNTGDNTPAVIYYDLVPGEVLRVTVMPKGFGSENCTSLGMLKPADGLEGVKRFVVEAVDRAGPNPCPPVTVGVGLGGTADRALLLAKRALLREVGSSHPDPELAALERELLEEVNKLGYGPGGLGGRVTALAVHVEAYPTHIAGLPVGVCINCHAARHRTWEWRGEGDD
SIO_010081: TPH_RS01910
subclass of: SO_0000673
so part of: TPH_RS01910
location: 386536..387396
location: region:386536-387396:1
so has part: feature:386536-387396:1:exon

WP_015049540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:386536-387396:1:exon

TPH_RS01915
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01915
old locus tag: Tph_c03760
so part of: sequence
location: 387389..387946
location: region:387389-387946:1
so has part: feature:387389-387946:1:exon
subclass of: SO_0000010

position:387389:1
position: 387389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387946:1
position: 387946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387389-387946:1:exon

TPH_RS01915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01915
old locus tag: Tph_c03760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011343010.1
GO function: GO:0016836 - hydro-lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FumA C-terminus/TtdB family hydratase beta subunit
translation: MIDLLRLEVPFSDEVARELEAGQRLLLTGVIFGARDQAHLRFATALQRGESLPLDLKGQVLYYVGPTPAPPGRPCGAAGPTTAGRMDRYTPLLLEYGIKGVIGKGKRSPQVVAALQKHGAVYLAATGGAGALIGRCIEEMRVVAYPDLGPEAVYRMVVRNLPVTVAVDSRGRNLYEEEPARYRLR
SIO_010081: TPH_RS01915
subclass of: SO_0000673
so part of: TPH_RS01915
location: 387389..387946
location: region:387389-387946:1
so has part: feature:387389-387946:1:exon

WP_015049541.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:387389-387946:1:exon

TPH_RS15525
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15525
old locus tag: Tph_c03770
so part of: sequence
location: complement(388114..388440)
location: region:388114-388440:-1
so has part: feature:388114-388440:-1:exon
subclass of: SO_0000010

position:388114:-1
position: 388114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388440:-1
position: 388440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388114-388440:-1:exon

TPH_RS15525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15525
old locus tag: Tph_c03770
inference: COORDINATES: protein motif:HMM:NF024198.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YmaF family protein
translation: MECDSLSYPCFDYHEHVHGHGGRTSCIEGHAHLHPGVTGPPQPAEGSHIHDIRGMTTFDDGHTHAYFAVTGPAVPLPGGYHTHYISFETNMVDGHRHRVMGFVDPSTR
SIO_010081: TPH_RS15525
subclass of: SO_0000673
so part of: TPH_RS15525
location: complement(388114..388440)
location: region:388114-388440:-1
so has part: feature:388114-388440:-1:exon

WP_236608845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:388114-388440:-1:exon

TPH_RS15530
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15530
so part of: sequence
location: 388697..388834
location: region:388697-388834:1
so has part: feature:388697-388834:1:exon
subclass of: SO_0000010

position:388697:1
position: 388697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388834:1
position: 388834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388697-388834:1:exon

TPH_RS15530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15530
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMKQVEKEQYTTMLPSAAPTEHENTRQSAGERPMEGRVTGQAKRG
SIO_010081: TPH_RS15530
subclass of: SO_0000673
so part of: TPH_RS15530
location: 388697..388834
location: region:388697-388834:1
so has part: feature:388697-388834:1:exon

WP_162137332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:388697-388834:1:exon

TPH_RS01925
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01925
old locus tag: Tph_c03780
so part of: sequence
location: 389134..391056
location: region:389134-391056:1
so has part: feature:389134-391056:1:exon
subclass of: SO_0000010

position:389134:1
position: 389134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391056:1
position: 391056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389134-391056:1:exon

TPH_RS01925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01925
old locus tag: Tph_c03780
inference: COORDINATES: protein motif:HMM:NF025885.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma 54-interacting transcriptional regulator
translation: MIILDSGYRQYELDQSDIVNVWRRFIDGGNEKSSLLPSTLLSSWKRCFELKVDPLMSDLDLTVVGDFAKRIETKEWLLNLAASHIAKYYKLAEQSDFVFAILDEDGVILDLIGEQNRVRRLEEEYSITHGVPINERTTGTTATYLSLLSNKSVQTVGAEHYIRRFHHITDSAAPIRDARGNIIGALSMSAQNIEYAHPHTLGMVTSIADSIAVHLRRQEVEKNQELFEGSLDEVVDNLCARGLLQIDEWGRAERVSRPLAELLGLPPERLVGLPADVVARLGAEKIPFRGRQAGRRMIAAPDGSRKPGKVAGAIISDREVPEKKGKSRKARNRFGFEDIVGRSRQLLKAVDLAKKIANSTSAVLLLGESGTGKELFARAIHNSSPMSEGPFVSVNCAAIPRELVGTELFGYEEGAFTGAKKGGNVGKFELANNGTLFLDEIGEMPLEIQGYLLRALEEKAITRIGGNCSIPVNVRVIAATNRRLREDALAGHFRLDLFFRLNVFTISLPPLRERPDDIPLLVDHFISKFSAASGKNVLGVTPAAMEALRRYRWPGNVRELSNVIERAVFLSESQYIDVSDLPEEIVGCDGEDGVLTVKDYERIKISELLSKFKGNKTRVAATLGISRASLYRRLKEYGMM
SIO_010081: TPH_RS01925
subclass of: SO_0000673
so part of: TPH_RS01925
location: 389134..391056
location: region:389134-391056:1
so has part: feature:389134-391056:1:exon

WP_015049543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:389134-391056:1:exon

TPH_RS01930
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01930
old locus tag: Tph_c03790
so part of: sequence
location: 391425..392993
location: region:391425-392993:1
so has part: feature:391425-392993:1:exon
subclass of: SO_0000010

position:391425:1
position: 391425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392993:1
position: 392993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391425-392993:1:exon

TPH_RS01930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01930
old locus tag: Tph_c03790
inference: COORDINATES: protein motif:HMM:NF013086.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MADKIGRRSFIKKMAAAGATVVGAGVLAGCGKGSSSDSKIPANWDKEADVVVVGGGGTGIVAALTAREMGSSVVVLEKAAVVGGSTALSGGVIQAAGTKFQKELTEYKDDTPEKHYQYWLQAAEGLADPELVKGMADNAPANIDWLVKQGLTYVSVYGVDPIPYVDPELMTDRIHVPGGAGKAAKAGTGKIHVDILYKQAKNKGAEFMLETEVGELIYDPKKGVVGVRAQKGGKEIAVKAKKGVILATSGFDRNKDMAKALSPQQYWALETGQVFTAPTNTGDGIRMAMALGADLAGVGGTIGVPFYNVAIAPLSTNLPEVPGIYVNKYGLRFVNEATHYAYCMRAVFNQEGHEAWAIFDEETKNMGGEVIGGIFKPWSHDLSKEVADGTIVRAGTIRELAEKIGVNADNLEYTVNRWNSDTAKGRDTLFNKQVGLKPLARAPFYAAKVKEGNLGTCGGLKINTKGQVVNVDGQVIPRLYAGGMCAGGFIGPYYPGSGTAIAATVYFGRLCAQNACGEKPWE
SIO_010081: TPH_RS01930
subclass of: SO_0000673
so part of: TPH_RS01930
location: 391425..392993
location: region:391425-392993:1
so has part: feature:391425-392993:1:exon

WP_015049544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391425-392993:1:exon

TPH_RS01935
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01935
old locus tag: Tph_c03800
so part of: sequence
location: complement(393240..393899)
location: region:393240-393899:-1
so has part: feature:393240-393899:-1:exon
subclass of: SO_0000010

position:393240:-1
position: 393240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393899:-1
position: 393899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393240-393899:-1:exon

TPH_RS01935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01935
old locus tag: Tph_c03800
inference: COORDINATES: protein motif:HMM:NF014069.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD-GYP domain-containing protein
translation: MFEINKKTRSFQISLTEIRQKAPLTLKCRLLLHNLAEKDVNTYVHSCFTGQLAAVLGAALELSEKTVVDLYIAGLLHDLGKILVPRSILLKEAALTGEEYAIVRQHVDDGIRMLSYQQLSATVVNAIKYHHERWDGKGYPHGLDGRQTPIEGRILQIADAFSAMTTKRAYRDPLSTEEAVEEIRRNRSSQFDPELADLFIEACQKSPAHFTASEAVFPL
SIO_010081: TPH_RS01935
subclass of: SO_0000673
so part of: TPH_RS01935
location: complement(393240..393899)
location: region:393240-393899:-1
so has part: feature:393240-393899:-1:exon

WP_015049545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393240-393899:-1:exon

TPH_RS01940
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: radA
locus tag: TPH_RS01940
old locus tag: Tph_c03810
so part of: sequence
location: 394326..395696
location: region:394326-395696:1
so has part: feature:394326-395696:1:exon
subclass of: SO_0000010

position:394326:1
position: 394326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395696:1
position: 395696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394326-395696:1:exon

TPH_RS01940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: radA
locus tag: TPH_RS01940
old locus tag: Tph_c03810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013780088.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA repair protein RadA
translation: MGRTKTVFFCGECGYEAGKWLGRCPACGAWNSFCEAPGRQKRQGFSFLPAARQAPEPLTTAAPDAVEERLPGRFGELDRVLGGGIVPGSVALLGGAPGIGKSTLLLQLAAQAAERHGIVLYVSGEESRRQVQMRARRLKLSSERLYFLAETDLEGICRAVEELSPVLLIIDSIQTTFHPDLPLAAGSVGQLCRCTAELVRLAKSRNIACFLVGHVTKEGNLAGPRVLEHMVDVVLSFEGERHQNLRLLRAVKNRFGATDEVAVFAMGEGGLEEVENPSAIFLAGRSGGVPGSVVVAALEGTRPILVEIQALVCPAAYGSPRRAATGVDYNRVVLIAAVLEKRVGLALAGQDIYVGVVGGLRIGEPAADLGIALALASSYRNAAVDREMVVAGEIGLTGEVRAVGYMDQRLKEAARLGFRRVLVPWRNLDLQKKYPDLEFTGVKTVRDALDQAICQC
SIO_010081: TPH_RS01940
subclass of: SO_0000673
so part of: TPH_RS01940
location: 394326..395696
location: region:394326-395696:1
so has part: feature:394326-395696:1:exon

WP_028991151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394326-395696:1:exon

TPH_RS01945
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: disA
locus tag: TPH_RS01945
old locus tag: Tph_c03820
so part of: sequence
location: 395709..396947
location: region:395709-396947:1
so has part: feature:395709-396947:1:exon
subclass of: SO_0000010

position:395709:1
position: 395709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396947:1
position: 396947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395709-396947:1:exon

TPH_RS01945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: disA
locus tag: TPH_RS01945
old locus tag: Tph_c03820
EC number: 2.7.7.85
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005583537.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA integrity scanning diadenylate cyclase DisA
translation: MKEERFQLLEEDVAVLDERPKEEKAPKGKGQKEAPVREVKEEKPDKKEPREEKKEPIDEKGDGLTGPLKMVAPGTALREGLDSVLRAKTGALIVVGDAPEVLRFVEGGFHIDTEFTPAGLYELAKMDGAIVLSRDARRILYANAQLIPDPSIPSEETGIRHRTAERFARQTGALVIAISQRRGVITLYKGAERYSLQDISVILSKANQAVQTLEKYKGVLDKALINLTALEFEDLVTVYDVARVVQRGVMVLQVVKELENYICELGTEGRLITMQVEELLANVREELCCVIRDYLDDEGKNAEDVLRVVSSWPPDDLLDLTGISRILGYGASSSILDLSVYPRGYRILQRIPRLPAQIVENLIRTFKNLQNILKASIEELDDVEGIGEVRAKAIKNGLHRLQEQVMLERYMG
SIO_010081: TPH_RS01945
subclass of: SO_0000673
so part of: TPH_RS01945
location: 395709..396947
location: region:395709-396947:1
so has part: feature:395709-396947:1:exon

WP_015049547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395709-396947:1:exon

TPH_RS01950
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01950
old locus tag: Tph_c03830
so part of: sequence
location: complement(397049..397444)
location: region:397049-397444:-1
so has part: feature:397049-397444:-1:exon
subclass of: SO_0000010

position:397049:-1
position: 397049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397444:-1
position: 397444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397049-397444:-1:exon

TPH_RS01950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01950
old locus tag: Tph_c03830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011345223.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKDLICDEFQNAVSELLIRHHSILDVLSKFQEACARTNRATVKAVTGCGCLSIEAKKRQIPPDVSLHELKDYFSSHLNGEICPSCQEMVETELGKTLFYMAALCNLLNLNLYDIFLKEHKKLSTLRIFNFT
SIO_010081: TPH_RS01950
subclass of: SO_0000673
so part of: TPH_RS01950
location: complement(397049..397444)
location: region:397049-397444:-1
so has part: feature:397049-397444:-1:exon

WP_015049548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397049-397444:-1:exon

TPH_RS01955
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01955
old locus tag: Tph_c03840
so part of: sequence
location: 397634..398113
location: region:397634-398113:1
so has part: feature:397634-398113:1:exon
subclass of: SO_0000010

position:397634:1
position: 397634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398113:1
position: 398113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397634-398113:1:exon

TPH_RS01955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01955
old locus tag: Tph_c03840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011393966.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CarD family transcriptional regulator
translation: MFQIGDRVVHPMHGAGIVEALERRGEKNEVYYVLRLFAGNLKVLVPADKVETIGVRRVISEAEIAKVLRVLGKKDQGKPLLNWNHRYRANLEKIRTGNVFAVAEVVRTLMRQELKKGLSSGEKRMLESAFQILSSELVLAGKLDKSKVESMIKDAVAQG
SIO_010081: TPH_RS01955
subclass of: SO_0000673
so part of: TPH_RS01955
location: 397634..398113
location: region:397634-398113:1
so has part: feature:397634-398113:1:exon

WP_015049549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397634-398113:1:exon

TPH_RS01960
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01960
old locus tag: Tph_c03850
so part of: sequence
location: 398271..399404
location: region:398271-399404:1
so has part: feature:398271-399404:1:exon
subclass of: SO_0000010

position:398271:1
position: 398271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399404:1
position: 399404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398271-399404:1:exon

TPH_RS01960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01960
old locus tag: Tph_c03850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012268982.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PIN/TRAM domain-containing protein
translation: MLQKVIRILLTLIGAGIGFSLNYLLIRLDFVQSLAAGEGFAWYALVGLLTLVAGAVTYLAAPRLIELTLQMVSFFEGTLQRTPLQDLLGGALGLIVGLVIANLLGAPFSNLPWIGPFIPIVASIILGYLGLSVGLKKKEELAGLFSFIKIGSKQGRGEGGKSTYKVLDTNVIIDGRIADICKTGFLEGTLLVPRFVLEELQHIADSSDVLRRNKGRRGLDILNQMRKEQGIKIEIRDFEGLDRKDVDSGLIQICKRLDCPVVTNDYNLNKVAELVGIKVLNINDLANAVKPLFLPGEEIDGVDVIRDGKEAGQGIAYLEDGTMIVIEGGKKYIGERISVVVTSVLQTSAGRMIFAKPKVNLKDTAAGRHYHEVKVIG
SIO_010081: TPH_RS01960
subclass of: SO_0000673
so part of: TPH_RS01960
location: 398271..399404
location: region:398271-399404:1
so has part: feature:398271-399404:1:exon

WP_015049550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:398271-399404:1:exon

TPH_RS15870
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: ispD
locus tag: TPH_RS15870
pseudo: true
so part of: sequence
location: 399397..>400056
location: region:399397-400056:1
so has part: feature:399397-400056:1:exon
subclass of: SO_0000010

position:399397:1
position: 399397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400056:1
position: 400056
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399397-400056:1:exon

TPH_RS15870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: ispD
locus tag: TPH_RS15870
inference: COORDINATES: protein motif:HMM:TIGR00453.1
GO function: GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity [Evidence IEA]
GO process: GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
SIO_010081: TPH_RS15870
subclass of: SO_0000673
so part of: TPH_RS15870
location: 399397..>400056
location: region:399397-400056:1
so has part: feature:399397-400056:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:399397-400056:1:exon

TPH_RS15875
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: ispF
locus tag: TPH_RS15875
so part of: sequence
location: 400066..400626
location: region:400066-400626:1
so has part: feature:400066-400626:1:exon
subclass of: SO_0000010

position:400066:1
position: 400066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400626:1
position: 400626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400066-400626:1:exon

TPH_RS15875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: ispF
locus tag: TPH_RS15875
EC number: 4.6.1.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011393963.1
GO function: GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
GO process: GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
translation: MAGAKGAAGEAQERGEEGRRIGLGYDVHPFCAGRPLILGGVEIPGETGLAGHSDADVLLHALMDACLGAAGLPDIGSQFPPGEPRWKDASSLALLAVVAGLLDEAGYRVAQVDLVVAAERPRLGRYLEGMKERIAAVLGIPRTAVGLKATTTEGLGFVGRGEGIAAWAVATVMPKKIRPPSPGGRG
SIO_010081: TPH_RS15875
subclass of: SO_0000673
so part of: TPH_RS15875
location: 400066..400626
location: region:400066-400626:1
so has part: feature:400066-400626:1:exon

WP_236608846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:400066-400626:1:exon

TPH_RS01970
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01970
old locus tag: Tph_c03880
so part of: sequence
location: complement(400986..401999)
location: region:400986-401999:-1
so has part: feature:400986-401999:-1:exon
subclass of: SO_0000010

position:400986:-1
position: 400986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401999:-1
position: 401999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400986-401999:-1:exon

TPH_RS01970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01970
old locus tag: Tph_c03880
inference: COORDINATES: protein motif:HMM:NF025885.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma 54-interacting transcriptional regulator
translation: MRKRLRARGHLAKYDFSDILGESEKIKDAIEKAKRFGKVDATVLIYGETGTGKEFFAHAIHNVSSRKNGPFIAVNCAAMPESLLESELFGYAEGAFTGAKKGGKRGLFEAADGGTIFLDEISEMSDKLQTRLLRVLQEYEIMRLGDNRVIRIDVRVIAATNRNLHKMVAEKLFRADLFYRINVLTLVIPSLRERREDIPVLVDHFLHLFNRKFGKNIKGVERRGMELLAAHDWPGNIRELKNIMERLVILSDGEYIPAELVAESLYTSSEWRPTEPVRQGQPDVTPGQRRISRLEEEAIREALIAAKGNKKKAAALLGISRTTLWRRLKKLQRGEHQ
SIO_010081: TPH_RS01970
subclass of: SO_0000673
so part of: TPH_RS01970
location: complement(400986..401999)
location: region:400986-401999:-1
so has part: feature:400986-401999:-1:exon

WP_015049553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:400986-401999:-1:exon

TPH_RS01975
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01975
old locus tag: Tph_c03890
so part of: sequence
location: complement(402164..402442)
location: region:402164-402442:-1
so has part: feature:402164-402442:-1:exon
subclass of: SO_0000010

position:402164:-1
position: 402164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402442:-1
position: 402442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402164-402442:-1:exon

TPH_RS01975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01975
old locus tag: Tph_c03890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011392238.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIIRVLTEGQYRLDGNALAELDAMDDSLLDAVGAGDEQQFAERLRQVVELVQTRGKRIPDDELVESDLVIPAPDTTLEEARELFAGYPRNLR
SIO_010081: TPH_RS01975
subclass of: SO_0000673
so part of: TPH_RS01975
location: complement(402164..402442)
location: region:402164-402442:-1
so has part: feature:402164-402442:-1:exon

WP_015049554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402164-402442:-1:exon

TPH_RS01980
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01980
old locus tag: Tph_c03900
so part of: sequence
location: complement(402439..403140)
location: region:402439-403140:-1
so has part: feature:402439-403140:-1:exon
subclass of: SO_0000010

position:402439:-1
position: 402439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403140:-1
position: 403140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402439-403140:-1:exon

TPH_RS01980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01980
old locus tag: Tph_c03900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011392237.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PspA/IM30 family protein
translation: MGLLARISTVFKAKINKVLDQMENPHETLDYSYEKQVELLQKVRRNITNVAASKKRLELQVVKLKSDLNKLDGQAKEALRQGREDLARLALERKVQIEQQIQDLEQQVADLNKEQEKLTQVENRLRAKVEAFRTKKEVIKARYSASEAQVKIGEAMTGLSEELADVGMAIERAERRTEEMQARASAIDELIASGVLEEPLGEKDPVEAELKKMQAAGRVEDELSRLKKEVSEG
SIO_010081: TPH_RS01980
subclass of: SO_0000673
so part of: TPH_RS01980
location: complement(402439..403140)
location: region:402439-403140:-1
so has part: feature:402439-403140:-1:exon

WP_015049555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402439-403140:-1:exon

TPH_RS01985
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01985
old locus tag: Tph_c03910
so part of: sequence
location: complement(403194..403760)
location: region:403194-403760:-1
so has part: feature:403194-403760:-1:exon
subclass of: SO_0000010

position:403194:-1
position: 403194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403760:-1
position: 403760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403194-403760:-1:exon

TPH_RS01985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01985
old locus tag: Tph_c03910
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGFLDALFGKSRPPKARLEKLFALSTAAVPFAELGWTPAGRCGLTLKPATSLDFRSAAEELKELLHLAVKETKTRMEIRDDEYRYRWLLFEDPDWDDLVALVHMAAQTLADNGYDTQLLAAVFPFKGPGGEKLYIIYNYKRGSFYPYLPTGKEGRDHNTELRLFTLLEKELPWEKDVSFWYPIRNCPV
SIO_010081: TPH_RS01985
subclass of: SO_0000673
so part of: TPH_RS01985
location: complement(403194..403760)
location: region:403194-403760:-1
so has part: feature:403194-403760:-1:exon

WP_015049556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403194-403760:-1:exon

TPH_RS01990
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: htpX
locus tag: TPH_RS01990
old locus tag: Tph_c03920
so part of: sequence
location: complement(403762..404652)
location: region:403762-404652:-1
so has part: feature:403762-404652:-1:exon
subclass of: SO_0000010

position:403762:-1
position: 403762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404652:-1
position: 404652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403762-404652:-1:exon

TPH_RS01990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: htpX
locus tag: TPH_RS01990
old locus tag: Tph_c03920
EC number: 3.4.24.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011392235.1
GO function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zinc metalloprotease HtpX
translation: MKRERFPVDYGLTARMIFTMFLLAALYLFFGLVLWYAGIGFTGIVFFVGIMLFIQYYFSDRLVLLSTGAREVSPQEAPQLHAMVERLSVLADVPKPRVAVMPTSIPNAFATGRSPRNAVVAVTAGLMQRLTEPEVEAVLAHEMSHIKNRDVAVMTIASFFATVASFIVQNFFFYGGFLDRDREDRGGAMLVYLVSLLVWLISFFLIRALSRYREFAADRGAAFLTGSPGLLSSALMKISGIMQRFPERDLRQAEGMNAFFIIPALRGESFAELFSTHPSLERRIAYLQELERQMRG
SIO_010081: TPH_RS01990
subclass of: SO_0000673
so part of: TPH_RS01990
location: complement(403762..404652)
location: region:403762-404652:-1
so has part: feature:403762-404652:-1:exon

WP_015049557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403762-404652:-1:exon

TPH_RS01995
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS01995
old locus tag: Tph_c03930
so part of: sequence
location: complement(404754..405374)
location: region:404754-405374:-1
so has part: feature:404754-405374:-1:exon
subclass of: SO_0000010

position:404754:-1
position: 404754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405374:-1
position: 405374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404754-405374:-1:exon

TPH_RS01995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS01995
old locus tag: Tph_c03930
inference: COORDINATES: protein motif:HMM:NF016764.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Yip1 family protein
translation: MWEYIPATLTAPVQTLRTVAERKLWKEGLLVVVLLSLLQGVSLASAMSNENILPYLEGITGTPGIEVTVAVLQSPYFLTAAAFFLRALQWVLAGVLFHLFARLFKGQGTLGGVLAATAFAGSPDFIGIPLAALTSLAGGLAFLSGLIEFGTGIWTAVLGVIAIRENYRIGTGAAAATFFIPFILLFIAALFLFGVLLAFAALLSLP
SIO_010081: TPH_RS01995
subclass of: SO_0000673
so part of: TPH_RS01995
location: complement(404754..405374)
location: region:404754-405374:-1
so has part: feature:404754-405374:-1:exon

WP_015049558.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404754-405374:-1:exon

TPH_RS02000
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: sppA
locus tag: TPH_RS02000
old locus tag: Tph_c03940
so part of: sequence
location: complement(405387..406298)
location: region:405387-406298:-1
so has part: feature:405387-406298:-1:exon
subclass of: SO_0000010

position:405387:-1
position: 405387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406298:-1
position: 406298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405387-406298:-1:exon

TPH_RS02000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: sppA
locus tag: TPH_RS02000
old locus tag: Tph_c03940
inference: COORDINATES: protein motif:HMM:TIGR00706.1
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006465 - signal peptide processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptide peptidase SppA
translation: MDSRKAGIILIAASIALTFAAFFVSMGKAGKRQPPVFGGKVAVIYLTGTITGAQESSPFAGISGASQTMRDLERAEKDASLKAVVLRIDSPGGSAAASHELYEQVLRVKRSGKKVVASLGDTAASGGYYVAAAADKIVALPSTITGSIGVISTVPNLQELYRKIGYREYVFKSGAHKDMLSPSRPLTPEEEQIMQGIIEETYNQFVGVVAQGRNLPVESVRRLADGRIYTGSQAKELGLVDELGGKREAIALAAELAGIKGEPQVVEYRRVAGLLSLLGGIRSLFTDNLLPFPLPPAYTTLRY
SIO_010081: TPH_RS02000
subclass of: SO_0000673
so part of: TPH_RS02000
location: complement(405387..406298)
location: region:405387-406298:-1
so has part: feature:405387-406298:-1:exon

WP_015049559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405387-406298:-1:exon

TPH_RS02005
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02005
old locus tag: Tph_c03950
so part of: sequence
location: complement(406376..406957)
location: region:406376-406957:-1
so has part: feature:406376-406957:-1:exon
subclass of: SO_0000010

position:406376:-1
position: 406376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406957:-1
position: 406957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406376-406957:-1:exon

TPH_RS02005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02005
old locus tag: Tph_c03950
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRQTIWREFTLAFWDVWERIYSLLFHVRKVQPGSLFRLNLREYRGPALTLRDGTALHPGDKVGELHLANRQLLELQQKCGNQIQAVMCVKKELKQSLTELAALVAQEKVDPQVKAFFGITIFHQGARLLGFEVEEIRSRFWRFCFRCGQLLLLATYHPLGFRRFQKGHQSLVPKVIWMSRSQLIRNFSPPERP
SIO_010081: TPH_RS02005
subclass of: SO_0000673
so part of: TPH_RS02005
location: complement(406376..406957)
location: region:406376-406957:-1
so has part: feature:406376-406957:-1:exon

WP_015049560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406376-406957:-1:exon

TPH_RS02010
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02010
old locus tag: Tph_c03960
so part of: sequence
location: complement(407268..408071)
location: region:407268-408071:-1
so has part: feature:407268-408071:-1:exon
subclass of: SO_0000010

position:407268:-1
position: 407268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408071:-1
position: 408071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407268-408071:-1:exon

TPH_RS02010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02010
old locus tag: Tph_c03960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011343784.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: slipin family protein
translation: MPGYFPLVILILLLIASSLRIVQEYERGVIFRLGRCVGARGPGIIFLIPGIERMQKVDLRVITMDVPTQEVITKDNVTVKVNAVVYFRVVNPVDSVIKVLDFVKATSQLSQTTLRSVLGQSELDELLSKRDAINQRLQHIIDEGTEPWGIKVSNVEVKDVELPPTMQRAMAAQAEAERERRAKLIHADGEFQAAKTLTEAANIISSNPATIQLRYLQTLKEIAANQSSTIIFPLPIDLIQPFVNMAGVFSNTNLRQGEENRTEPPQS
SIO_010081: TPH_RS02010
subclass of: SO_0000673
so part of: TPH_RS02010
location: complement(407268..408071)
location: region:407268-408071:-1
so has part: feature:407268-408071:-1:exon

WP_015049561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:407268-408071:-1:exon

TPH_RS16155
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS16155
so part of: sequence
location: 408229..408360
location: region:408229-408360:1
so has part: feature:408229-408360:1:exon
subclass of: SO_0000010

position:408229:1
position: 408229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408360:1
position: 408360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408229-408360:1:exon

TPH_RS16155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS16155
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGSPPVYRFALDCRPDRTTARLLRSPFHAAKGGSPPSEKRLP
SIO_010081: TPH_RS16155
subclass of: SO_0000673
so part of: TPH_RS16155
location: 408229..408360
location: region:408229-408360:1
so has part: feature:408229-408360:1:exon

WP_269077477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:408229-408360:1:exon

TPH_RS02015
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02015
old locus tag: Tph_c03970
so part of: sequence
location: complement(408382..409719)
location: region:408382-409719:-1
so has part: feature:408382-409719:-1:exon
subclass of: SO_0000010

position:408382:-1
position: 408382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409719:-1
position: 409719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408382-409719:-1:exon

TPH_RS02015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02015
old locus tag: Tph_c03970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014062284.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nodulation protein NfeD
translation: MNDLRAAKRGAALLGSILLLALLLNLGTPLPSVRAVEGNPPVVVAGYDGAVVPITAKYLERVIRHAENLGATACVIQLSTPGGLYTTTQEIVTTILNARVPVIVYVSPAGGWAGSAGTFITISAHVAAMAPGSRIGAAHPVGIGPSDGQQQDIPSQKITEDAAAWARSIAQLRGKNADAVEQAVRESKSYSDAEALKLNLIDLRAQDLEDLLRQLDGKTVTLSSGARVELRTKGAPIVNLSMNPVEKTLLALSNPDLAYILMTVGMAGLMVEIYNPGLIFPGVAGAISLLLGLYSLGTLDAYWGGVLLIILAFGLFIAEAFVPSHGILGAGGVISFVTGSLLLFSGGPPGIGINISLIVTTALVFAALVALLVTAVVRGQKRAVTTGSEGLIGRMGTARSDLLPEGLVFVEGELWRAVSEEGPIKAGEKVVITAMEGLNLRVRRA
SIO_010081: TPH_RS02015
subclass of: SO_0000673
so part of: TPH_RS02015
location: complement(408382..409719)
location: region:408382-409719:-1
so has part: feature:408382-409719:-1:exon

WP_015049562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:408382-409719:-1:exon

TPH_RS02020
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02020
old locus tag: Tph_c03980
so part of: sequence
location: complement(410038..410913)
location: region:410038-410913:-1
so has part: feature:410038-410913:-1:exon
subclass of: SO_0000010

position:410038:-1
position: 410038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410913:-1
position: 410913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410038-410913:-1:exon

TPH_RS02020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02020
old locus tag: Tph_c03980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009052266.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: substrate-binding domain-containing protein
translation: MKPNRRLSTGILFLFLCSILAFAAGCGEQQEQAAAKKDVILATTTSTVDTGLLDELIPIFEEKTGYRVKPIDRGTGEALEMGKKGEADVLLTHAPASERPLVENGDVINYQLVMHNDFIIVGPPDDPAQIKGEKDATEAFKKIMNGRFTFVSRGDDSGTHKKEKAIWDKLGVTPAGDWYLEAGSGMADTLRLASEKNAYTLTDRGTYLAQKDNLKLASLMEGDPMLLNIYHVMQVNPEKFPKVNAAGAKAFVEFMISPETQRIIGDFGVDKYGQPLFIPDAGKSEEEIGMQ
SIO_010081: TPH_RS02020
subclass of: SO_0000673
so part of: TPH_RS02020
location: complement(410038..410913)
location: region:410038-410913:-1
so has part: feature:410038-410913:-1:exon

WP_015049563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:410038-410913:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 1089553
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01055
inference: COORDINATES: profile:INFERNAL:1.1.1
note: molybdenum cofactor riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: molybdenum cofactor
so part of: sequence
location: complement(411081..411202)
location: region:411081-411202:-1
so has part: feature:411081-411202:-1:region

position:411081:-1
position: 411081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411202:-1
position: 411202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411081-411202:-1:region

TPH_RS02030
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02030
old locus tag: Tph_c03990
so part of: sequence
location: 411822..412079
location: region:411822-412079:1
so has part: feature:411822-412079:1:exon
subclass of: SO_0000010

position:411822:1
position: 411822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412079:1
position: 412079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411822-412079:1:exon

TPH_RS02030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02030
old locus tag: Tph_c03990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011025969.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta-type small acid-soluble spore protein
translation: MPEKKTVKKKKAKKPGPHERLKWETARELGLDDDLAKAGDELTVREAGKIGGQMVRKLIRAGQKALADEQRKQTAAETTPDSPEK
SIO_010081: TPH_RS02030
subclass of: SO_0000673
so part of: TPH_RS02030
location: 411822..412079
location: region:411822-412079:1
so has part: feature:411822-412079:1:exon

WP_015049564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:411822-412079:1:exon

TPH_RS02035
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: groL
locus tag: TPH_RS02035
old locus tag: Tph_c04000
so part of: sequence
location: complement(412350..413975)
location: region:412350-413975:-1
so has part: feature:412350-413975:-1:exon
subclass of: SO_0000010

position:412350:-1
position: 412350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413975:-1
position: 413975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412350-413975:-1:exon

TPH_RS02035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: groL
locus tag: TPH_RS02035
old locus tag: Tph_c04000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011392083.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chaperonin GroEL
translation: MPAKQIVFDVDARKKLERGVNIVADAVKTTLGPKGRNVVLEKKFGSPTITKDGVTVAKEIELEDPFENMGAQLCKEVASKTNEIAGDGTTTATVLAQAIVNEGLKNVTAGANPIFLKRGIDMAVEKAVEEMKKHSTPVETRESIAHVAAIAGNDKEIGELVAEAMEKVGKDGVITVEESKGIETLVEVVEGMEFDRGYISPYFVTNSETMEVELEEPYILIYEKKISAVGDLLPLLERVVRTGKPFLIIAEDVEGEALATLVVNKLRGVLHCAAVKAPAFGDRRKAMLEDIAILTGGTFISEDMGFKLENVDIDKLGRAKKVKINKEKTTIVEGYGASDKIKMRVNQIKAQIEETTSDYDREKLQERLAKLSGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGIIPGGGTCLVNVIPALDEIQAEGDVLVGVRIVRRALEEPLRQIAENAGLEGSVVIERIKNEKAGIGFNALTEQYVDMVKEGIVDPLKVTRSALQNAASIASMLLTTEALISEIPQKKENTPPSMPGGMGMDY
SIO_010081: TPH_RS02035
subclass of: SO_0000673
so part of: TPH_RS02035
location: complement(412350..413975)
location: region:412350-413975:-1
so has part: feature:412350-413975:-1:exon

WP_015049565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412350-413975:-1:exon

TPH_RS02040
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: groES
locus tag: TPH_RS02040
old locus tag: Tph_c04010
so part of: sequence
location: complement(414020..414304)
location: region:414020-414304:-1
so has part: feature:414020-414304:-1:exon
subclass of: SO_0000010

position:414020:-1
position: 414020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414304:-1
position: 414304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414020-414304:-1:exon

TPH_RS02040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: groES
locus tag: TPH_RS02040
old locus tag: Tph_c04010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015738210.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: co-chaperone GroES
translation: MLKPLGDHVLVKPLSKEEKTEGGIYLPDTAKEKPQEGEVIAVGPGRLLENGTRVQPEVKVGDKVIYAKYGGTEIKLGDVEYLIMRESDILAIKD
SIO_010081: TPH_RS02040
subclass of: SO_0000673
so part of: TPH_RS02040
location: complement(414020..414304)
location: region:414020-414304:-1
so has part: feature:414020-414304:-1:exon

WP_015049566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414020-414304:-1:exon

TPH_RS02050
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02050
old locus tag: Tph_c04020
so part of: sequence
location: 414673..415449
location: region:414673-415449:1
so has part: feature:414673-415449:1:exon
subclass of: SO_0000010

position:414673:1
position: 414673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415449:1
position: 415449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414673-415449:1:exon

TPH_RS02050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02050
old locus tag: Tph_c04020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013781104.1
GO function: GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide deacetylase family protein
translation: MVLLRRRRLLCWGALATLLLAGVICFSGLCGGVGGVFNAADREVPIYAVDIREKKLAISFDAAWGADYTPTLLKILEENDIKTTFFLTGIWVKKYPEMVKAIAAAGHELGNHTSTHPHCNELSEEEFIEELKDNEEMIFKLTGKRTRLFRPPFGEYNNTNIRAARKLGYEVIQWSVDSLDWQELGVEAVVDRVLKNAHPGAIVLFHNNAKYTPEALPVILKSLRDQGYKIVPVSELLIKGDYYIERHSGLQKRKPGSR
SIO_010081: TPH_RS02050
subclass of: SO_0000673
so part of: TPH_RS02050
location: 414673..415449
location: region:414673-415449:1
so has part: feature:414673-415449:1:exon

WP_148275950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414673-415449:1:exon

TPH_RS02055
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02055
old locus tag: Tph_c04030
so part of: sequence
location: complement(415446..415991)
location: region:415446-415991:-1
so has part: feature:415446-415991:-1:exon
subclass of: SO_0000010

position:415446:-1
position: 415446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415991:-1
position: 415991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415446-415991:-1:exon

TPH_RS02055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02055
old locus tag: Tph_c04030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013412110.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYWKNKGAANTAATAEAAVKRAQELGIRHVVVASCSGSTVEHFLDKGLEVVCVTHHVGFTSPGEDEMPPAVREKLAAKGVRILTTTHLLAGVDRALRNKFGGVYPAEIIAQTLRMFGQGVKVCVEVAGMALDAGLIPYGQEVIAVGGSGTGADTAVVIVPAHSNNIFDTKIKEIICKPREF
SIO_010081: TPH_RS02055
subclass of: SO_0000673
so part of: TPH_RS02055
location: complement(415446..415991)
location: region:415446-415991:-1
so has part: feature:415446-415991:-1:exon

WP_015049568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415446-415991:-1:exon

TPH_RS02060
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02060
old locus tag: Tph_c04040
so part of: sequence
location: 416550..417878
location: region:416550-417878:1
so has part: feature:416550-417878:1:exon
subclass of: SO_0000010

position:416550:1
position: 416550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417878:1
position: 417878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416550-417878:1:exon

TPH_RS02060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02060
old locus tag: Tph_c04040
inference: COORDINATES: protein motif:HMM:TIGR00797.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MATE family efflux transporter
translation: MIRRRIFNLAWPAVCEMLLYMLLDFVDVAFVGRLGARPLAAVGLGAQIFFSVIFIFSAMSAGATALIARAIGAGDMRRAGRVAGHALILAFLAGGVVTFVIYRFAGDVAALFRFEPAVQHLAAVYIRITGLSAAFSLVYFIGNGIFRGAGMTRIPLLVAALANVVHIGIEYVLIFGKLGFPALGMRGAAIATACTQVFCCCVVLSLLFSGVTGLRVSLKEVLRSCDFALIKSIVRLSLPAGCEQALMDLGWIIGSFMLAGLGTVPFAAHQVVLTAESLSYMPGYGFAVAATTLVGQNLGARNPDGASANAVTAARMALLVMGGFAFLFLALPGPVVGIFTSDPQVASLGALCLRIAALEQPSIALEMVFAGALRGAGDTRTPAMVTVLSTWLLRIPLLYLSVYVLRFGLPAVWVITALDWSVRAASLTLLFRMGHWKQIEYA
SIO_010081: TPH_RS02060
subclass of: SO_0000673
so part of: TPH_RS02060
location: 416550..417878
location: region:416550-417878:1
so has part: feature:416550-417878:1:exon

WP_015049569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416550-417878:1:exon

TPH_RS02065
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02065
old locus tag: Tph_c04050
so part of: sequence
location: complement(418009..419523)
location: region:418009-419523:-1
so has part: feature:418009-419523:-1:exon
subclass of: SO_0000010

position:418009:-1
position: 418009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419523:-1
position: 419523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418009-419523:-1:exon

TPH_RS02065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02065
old locus tag: Tph_c04050
inference: COORDINATES: protein motif:HMM:NF015983.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: B12-binding domain-containing radical SAM protein
translation: MKVLFVYPQYPESFWSFKHALKFIGIKAAHPPLGLLTVAAMLPEDWEKRLVDMNVRKLREEDLLWADYVLISAMSIQQNSVREVLNRCRQLGVKVIAGGPLFTSEPEKFPEVDHLILNEAEITLQAFLEDLEKGCPKRIYTTEELPPLDRTPVPLWELINMKDYSTMSVQLSRGCPYDCEFCDITTLFGRKPRLKSAPQFIKELDALYEHGWRGGVFIVDDNFIGNKVLLKKEILPSLITWMEKRKNPFWFITEASINLADDEELMLMMQKAGFTSVFIGIETPSEESLKECNKFNNVNRDLIASVKKIQRYGMQVSGGFIVGFDSDTPSIFERQISFIQQSGIVTAMVGLLHAPVGTKLFKRLKRENRLLPTDFTGNNTDLAINFIPKMDLKKLIEGYQKIVTTIYDPARYYERIMEFFKEFRPARKKSITMLRFCYVKALFRAMVILGFLEKGRRHYWKLLLNTLVKYPRFFPEAVTFAIYGHHFRKIFSKYQPHLEGGKYG
SIO_010081: TPH_RS02065
subclass of: SO_0000673
so part of: TPH_RS02065
location: complement(418009..419523)
location: region:418009-419523:-1
so has part: feature:418009-419523:-1:exon

WP_015049570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:418009-419523:-1:exon

TPH_RS02070
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02070
old locus tag: Tph_c04060
so part of: sequence
location: complement(419803..420639)
location: region:419803-420639:-1
so has part: feature:419803-420639:-1:exon
subclass of: SO_0000010

position:419803:-1
position: 419803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420639:-1
position: 420639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419803-420639:-1:exon

TPH_RS02070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02070
old locus tag: Tph_c04060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009610804.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amidohydrolase family protein
translation: MKIDVHVHILSPDFIKDIKKNLDRDAHFKLLHDNPKARFATAEDVLENMEKTGIDRSVVFGFSCLDLGMAREANDYVIETVRRYPDRFIGFAIVPPQDPGMEKELRRCREAGLKGVGEVIPAAVHTDISDQQQVERFTAVCRELDLPILMHTNEQVGHYYPGKGKIGPEQAYLFAINNPDNKIIFAHWGGGLFCYELMPEVHESLRHVYYDNAASPFLFRPQVYAAARLAGVLPKVLLGSDFPLLSPARYYKEWAATDLTEEEKRGIWGENAARFLGL
SIO_010081: TPH_RS02070
subclass of: SO_0000673
so part of: TPH_RS02070
location: complement(419803..420639)
location: region:419803-420639:-1
so has part: feature:419803-420639:-1:exon

WP_028991145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419803-420639:-1:exon

TPH_RS02075
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02075
old locus tag: Tph_c04070
so part of: sequence
location: 421092..422063
location: region:421092-422063:1
so has part: feature:421092-422063:1:exon
subclass of: SO_0000010

position:421092:1
position: 421092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422063:1
position: 422063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421092-422063:1:exon

TPH_RS02075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02075
old locus tag: Tph_c04070
inference: COORDINATES: protein motif:HMM:NF013694.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: magnesium transporter CorA family protein
translation: MLKVYRTVEEQLLEIDEGDHLYEKGAWICLINPTDEELNRVSTHTGINRDLLRHPLDDEERPRIEVDTGQILIIIKIPVTRQHGEAEFYDAIPLGIIVTKDHLVTVCLDDNPLFQELMHDSMLYTFMKTRFLLIVLIKTAALYLRYLRRLDKRSTELQQRLSRSMRNEALLEMLEIQKSLVYFTTSLRANGIVMEKLTRTQLINAEEAPASMLIKMYPEDQDLLEDAITENKQAIEMSTIYSSILTGAMDAYASIISNNLNAVMKFLTSVTIVLSLPTIVASIYGMNVALPFQHSPLAFAGIMGVTLGLCGMAAYALARWRMF
SIO_010081: TPH_RS02075
subclass of: SO_0000673
so part of: TPH_RS02075
location: 421092..422063
location: region:421092-422063:1
so has part: feature:421092-422063:1:exon

WP_015049572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:421092-422063:1:exon

TPH_RS02080
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02080
old locus tag: Tph_c04080
so part of: sequence
location: 422419..422700
location: region:422419-422700:1
so has part: feature:422419-422700:1:exon
subclass of: SO_0000010

position:422419:1
position: 422419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422700:1
position: 422700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422419-422700:1:exon

TPH_RS02080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02080
old locus tag: Tph_c04080
inference: COORDINATES: protein motif:HMM:NF016351.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF503 domain-containing protein
translation: MVVGLCTMELFLGEADSLKGKRRILKSMLDRVKAHHNVSIAEVGQQDLWQRSTIAFACVSNERNHAYQVLNSVIRFLERQKQSQVIDYNIEII
SIO_010081: TPH_RS02080
subclass of: SO_0000673
so part of: TPH_RS02080
location: 422419..422700
location: region:422419-422700:1
so has part: feature:422419-422700:1:exon

WP_015049573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422419-422700:1:exon

TPH_RS02085
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02085
old locus tag: Tph_c04090
so part of: sequence
location: 422790..423422
location: region:422790-423422:1
so has part: feature:422790-423422:1:exon
subclass of: SO_0000010

position:422790:1
position: 422790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423422:1
position: 423422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422790-423422:1:exon

TPH_RS02085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02085
old locus tag: Tph_c04090
inference: COORDINATES: protein motif:HMM:NF022112.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GerMN domain-containing protein
translation: MAWDFRRIEEEINEQRRRSLYYLILMVLVLALMVMGGCTLRERLGAGEQLEEPVQEEFEDPLAADVTVPPEQEMVKVVLYFLDADGRYLVAEAREIPKVEGIARAALDALCEGETEGELSSALPPGAEVLDLNIKPDGSCVVDLNLEATKIPGDDPRAEALAVYSVVNTLTEFPTVKSVQILVEGQNRKTFAKHIPVDTPLLRNLSFVKS
SIO_010081: TPH_RS02085
subclass of: SO_0000673
so part of: TPH_RS02085
location: 422790..423422
location: region:422790-423422:1
so has part: feature:422790-423422:1:exon

WP_015049574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422790-423422:1:exon

TPH_RS02090
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02090
old locus tag: Tph_c04100
so part of: sequence
location: 423522..425612
location: region:423522-425612:1
so has part: feature:423522-425612:1:exon
subclass of: SO_0000010

position:423522:1
position: 423522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425612:1
position: 425612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423522-425612:1:exon

TPH_RS02090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02090
old locus tag: Tph_c04100
EC number: 3.5.1.28
inference: COORDINATES: protein motif:HMM:NF013670.2
GO function: GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO process: GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-acetylmuramoyl-L-alanine amidase
translation: MSVFVCRKGCRSGSQHPGRGLFASLLLGLLAIGLVFFSPPAEAGEFADVRGHWAQGEIEKALAQGYVSGYPDGTFQPDRGITRAEFVAMVNGAFGISGTGPAFSDVRPDDWFAGAVRAAAGYGYIKGYPDGTFRPHQRINRQEAAGVLKGVLGTEKTAPLKFADAWQIASWARPAVASLVAEGVISGFPDGTFRPLGAITRAEAVVMINGGLRVKNGEEPGITPVRLYLTVTGSVVNIRSGPGTEYGILGQVRAGDLLQASARSTNNWYRVEYQGKTGWICGDYVEAHETRPPQRGDPGTLEVQAVSQAGGVLITLIGHSDTVYSWEEDDGNLVVTVPGVTLIRTPQSIAVGKAGVDRVVTKFSSAQPGTALVEVRFTDEPLPVYYRVQKGPPGELRIEVPNQINRIEADVEGEELVLRLAGTAPLDYQAFTLLNPRRLVFDFSGLVIHPFLLGWEKSIGLEGFTEARIGQFQADVARLVVETKCRVSYAAAREDGGRCLTLRLEAAGAAGSLVVIDPGHGGSDPGAVGPTGLREKDVNLAISQIVAEILRGQGYQVVLTRDGDYTVDLLPRAQLANGMGAAVFVSIHCNASINRSMGGTATYTYAPIGTTLGQQRDERLYLAELLQEEMVSALGLRNAGIFEENFSVLRNTQMPAALCEVAFISNYNEEQLLASDDFRRRVAEAIARAIARFLAG
SIO_010081: TPH_RS02090
subclass of: SO_0000673
so part of: TPH_RS02090
location: 423522..425612
location: region:423522-425612:1
so has part: feature:423522-425612:1:exon

WP_015049575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423522-425612:1:exon

TPH_RS02095
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02095
old locus tag: Tph_c04110
so part of: sequence
location: complement(425725..426330)
location: region:425725-426330:-1
so has part: feature:425725-426330:-1:exon
subclass of: SO_0000010

position:425725:-1
position: 425725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426330:-1
position: 426330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425725-426330:-1:exon

TPH_RS02095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02095
old locus tag: Tph_c04110
inference: COORDINATES: protein motif:HMM:NF013358.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetate uptake transporter family protein
translation: MSENKLPTEVSQVAATADPSPLGLGGFALTTFVLSVANAQLIAPAAKAAFLGLAFFYGGLAQLLAGMQEFKKNNVFGATAFSTYGAFWLSLATLVLLEALGVINWQGFAGQALGVFLLGFTIFNTYMWLASFRVNAAVCGVFTTLEITFILLVLAEFGFISSVPGGIMGIITALIAWYASAAGVINSVCGRIVLPVWPLKK
SIO_010081: TPH_RS02095
subclass of: SO_0000673
so part of: TPH_RS02095
location: complement(425725..426330)
location: region:425725-426330:-1
so has part: feature:425725-426330:-1:exon

WP_015049576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425725-426330:-1:exon

TPH_RS02100
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02100
old locus tag: Tph_c04120
so part of: sequence
location: 426836..427360
location: region:426836-427360:1
so has part: feature:426836-427360:1:exon
subclass of: SO_0000010

position:426836:1
position: 426836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427360:1
position: 427360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426836-427360:1:exon

TPH_RS02100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02100
old locus tag: Tph_c04120
inference: COORDINATES: protein motif:HMM:NF039198.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5698 domain-containing protein
translation: MESLWLGWLFIFVARVADMSLATVRTLFLVRGCAWEAGGIGFVEALLYIVALQMVFQNLNSVGSFFFYASGFACGNILGAFIEEKLAIGFLTVQIIPRSYPTRIAEMLRDAGFGVTVWDADGVEGRHQVILVVIRRRDRERLFSLLNETGEHPFISVSEARAKMGGVFGRRKAK
SIO_010081: TPH_RS02100
subclass of: SO_0000673
so part of: TPH_RS02100
location: 426836..427360
location: region:426836-427360:1
so has part: feature:426836-427360:1:exon

WP_015049577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426836-427360:1:exon

TPH_RS02105
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: murI
locus tag: TPH_RS02105
old locus tag: Tph_c04130
so part of: sequence
location: 427378..428238
location: region:427378-428238:1
so has part: feature:427378-428238:1:exon
subclass of: SO_0000010

position:427378:1
position: 427378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428238:1
position: 428238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427378-428238:1:exon

TPH_RS02105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: murI
locus tag: TPH_RS02105
old locus tag: Tph_c04130
EC number: 5.1.1.3
inference: COORDINATES: protein motif:HMM:TIGR00067.1
GO function: GO:0008881 - glutamate racemase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate racemase
translation: MNKTQPIGIFDSGVGGLTVVHCLWKRFPQEQVIYFGDTAHLPYGSRRPEEIIAFGTEIVSFLLQFAVKAVVAACNTSSSLSLPYLRERFPVPIIGMIGPGVRAAARVTRNKRVGVIATKATVESGAYEKAFQECAPDIRVYSQPCPLFVPLIENGCIEEKETYQVARTYLRPLREAGIDTLVFGCTHYPFLAPVIRQILGDGVRLVDPAQEAVKELADMLKLKEGKAPAGEGPRHLFFASGPVTSFYMVGSRLLGGFPYSVEHISLDGRVEDHCRRLSLGRPQVGG
SIO_010081: TPH_RS02105
subclass of: SO_0000673
so part of: TPH_RS02105
location: 427378..428238
location: region:427378-428238:1
so has part: feature:427378-428238:1:exon

WP_037999595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:427378-428238:1:exon

TPH_RS02110
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: rph
locus tag: TPH_RS02110
old locus tag: Tph_c04140
so part of: sequence
location: 428399..429124
location: region:428399-429124:1
so has part: feature:428399-429124:1:exon
subclass of: SO_0000010

position:428399:1
position: 428399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429124:1
position: 429124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428399-429124:1:exon

TPH_RS02110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: rph
locus tag: TPH_RS02110
old locus tag: Tph_c04140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001261764.1
GO function: GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease PH
translation: MRPDGRKPEELRPVRIHRNYLKYAEGSVLIEIGDTKLVCSASVEDKVPPFLKGQEKGWVTAEYSMLPRSTEVRTPRDSTRGRINGRSCEIQRLIGRSLRSVVDLSVLGERTIWVDCDVIQADGGTRTAAITGAFVALVDALRKLKEQEGWERLPVSDYVAAVSVGKVEDSLRLDLCYAEDSRAAVDMNVVMTGDGRFIEVQGTAEGAPFTEEELYDLLSLASAGIRRLVAYQKEVLGNLHE
SIO_010081: TPH_RS02110
subclass of: SO_0000673
so part of: TPH_RS02110
location: 428399..429124
location: region:428399-429124:1
so has part: feature:428399-429124:1:exon

WP_015049579.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428399-429124:1:exon

TPH_RS02115
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02115
old locus tag: Tph_c04150
so part of: sequence
location: 429117..429710
location: region:429117-429710:1
so has part: feature:429117-429710:1:exon
subclass of: SO_0000010

position:429117:1
position: 429117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429710:1
position: 429710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429117-429710:1:exon

TPH_RS02115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02115
old locus tag: Tph_c04150
EC number: 3.6.1.66
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011343261.1
GO function: GO:0047429 - nucleoside triphosphate diphosphatase activity [Evidence IEA]
GO process: GO:0009143 - nucleoside triphosphate catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XTP/dITP diphosphatase
translation: MNKLVIASRNRGKIAEYGEMLRDLPVEILSLADFPDLPEVRETGRTFRENALIKARAAAAATGLIALADDSGLEVDYLNGAPGVYSSRYAGPEQNDEANNRKLLAALEGVPMARRGARFRCVIAIVTPEGREFLSEGVCDGRISLAPRGRAGFGYDPLFLVPSLGKTFAELGPEVKNRISHRAQALRAARDMLRRLI
SIO_010081: TPH_RS02115
subclass of: SO_0000673
so part of: TPH_RS02115
location: 429117..429710
location: region:429117-429710:1
so has part: feature:429117-429710:1:exon

WP_015049580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429117-429710:1:exon

TPH_RS02120
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02120
old locus tag: Tph_c04160
so part of: sequence
location: 429726..430199
location: region:429726-430199:1
so has part: feature:429726-430199:1:exon
subclass of: SO_0000010

position:429726:1
position: 429726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430199:1
position: 430199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429726-430199:1:exon

TPH_RS02120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02120
old locus tag: Tph_c04160
inference: COORDINATES: protein motif:HMM:TIGR00040.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metallophosphoesterase
translation: MRVGILSDSHGNLKRAEQAVRRMGQLDLLLHAGDYYEDALLLADGCGVEVKGVAGNCDRFAPGPEEQILEVEGYRIYLTHGHLFGVKRGLERLAERAGKVGASIVIYGHTHVPLKKVANGVLYLNPGSIAWPRITGRPGFAVLEFRRSGFSAEIYEL
SIO_010081: TPH_RS02120
subclass of: SO_0000673
so part of: TPH_RS02120
location: 429726..430199
location: region:429726-430199:1
so has part: feature:429726-430199:1:exon

WP_015049581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429726-430199:1:exon

TPH_RS02125
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02125
old locus tag: Tph_c04170
so part of: sequence
location: 430756..431238
location: region:430756-431238:1
so has part: feature:430756-431238:1:exon
subclass of: SO_0000010

position:430756:1
position: 430756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431238:1
position: 431238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430756-431238:1:exon

TPH_RS02125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02125
old locus tag: Tph_c04170
inference: COORDINATES: protein motif:HMM:NF024644.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S dicluster domain-containing protein
translation: MAKVLMLNPEKCISCRTCELACSFKHDKEFRPSAARVNVVQFEKEGISVPLMCLQCDTAACEKVCPTGALKRNIATGALEVDDNKCIRCKMCIQACPFGNASYDSVKNRVLRCDLCGGDPQCARFCPGGAITYVEATAGALAKKRAYAAKFKEVLQEVSK
SIO_010081: TPH_RS02125
subclass of: SO_0000673
so part of: TPH_RS02125
location: 430756..431238
location: region:430756-431238:1
so has part: feature:430756-431238:1:exon

WP_015049582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430756-431238:1:exon

TPH_RS02130
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02130
old locus tag: Tph_c04180
so part of: sequence
location: 431238..433043
location: region:431238-433043:1
so has part: feature:431238-433043:1:exon
subclass of: SO_0000010

position:433043:1
position: 433043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431238-433043:1:exon

TPH_RS02130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02130
old locus tag: Tph_c04180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009052265.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldehyde ferredoxin oxidoreductase family protein
translation: MYGWVGRILRVNLSDGTIKKEPLDPIEARNYIGARGLGTRFWVKECDAEIDPLSEANNLIFMTGPLTGTLATNAGRYNVICKAPLTGAMAASNSGGYWGPELKYAGYDGIIIEGKAEKPVYLWINDDQVEIRSAEHLWGKDVNETTDTLRNETDFDARVACIGPAGENLVKFACVVNDYTRAAGRSGVGAVMGSKNLKAVVVKGTGAVRVADPDAFMEALAKAREMVKNHPVTGQGLPAYGTGILVNILDQSGGYPVNNFRDSGQFQFAEETSGETLAKTYLVRNKGCMGCGIGCGRITRVPEGPYKGFGEGPEYEAQWSLGADCGVGDLAAILKANNYCNELGMDPITLGSTIACAFELYEIGAITEKETGIPLGFGNAAAMVELSRKAAYREGFGNDIAEGSYRLASKYGHPELSMSCKKQEMAAYDPRVLQGMGLNYATNNRGGCHVRGYMTAPEILGIPEKLDNLATEGKAQWTKIFQDLTAAVDSSGICLFLTFAIGAPELSEQLTAATGIDFTVEEIMKIGERIWNMERLFLLANGFTKADDTLPPRILKEPVKVGPCKGAVSKLDVMLPEYYEVRGWDAEGRPTPEKLQELGLQ
SIO_010081: TPH_RS02130
subclass of: SO_0000673
so part of: TPH_RS02130
location: 431238..433043
location: region:431238-433043:1
so has part: feature:431238-433043:1:exon

WP_015049583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:431238-433043:1:exon

TPH_RS02135
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02135
old locus tag: Tph_c04190
so part of: sequence
location: 433073..433354
location: region:433073-433354:1
so has part: feature:433073-433354:1:exon
subclass of: SO_0000010

position:433073:1
position: 433073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433354:1
position: 433354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433073-433354:1:exon

TPH_RS02135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02135
old locus tag: Tph_c04190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049584.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MoaD family protein
translation: MKFFALLRDITGVKETADFTATVLVELLEKLSEHYGKELTRWLFAPTDSVQEKQLSSDVIILVNGRAIEHLAGLATPLKEEDEVAIFPRLAGG
SIO_010081: TPH_RS02135
subclass of: SO_0000673
so part of: TPH_RS02135
location: 433073..433354
location: region:433073-433354:1
so has part: feature:433073-433354:1:exon

WP_236608847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433073-433354:1:exon

TPH_RS02140
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: nuoE
locus tag: TPH_RS02140
old locus tag: Tph_c04200
so part of: sequence
location: 433483..433998
location: region:433483-433998:1
so has part: feature:433483-433998:1:exon
subclass of: SO_0000010

position:433483:1
position: 433483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433998:1
position: 433998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433483-433998:1:exon

TPH_RS02140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: nuoE
locus tag: TPH_RS02140
old locus tag: Tph_c04200
EC number: 1.6.5.9
inference: COORDINATES: protein motif:HMM:NF005722.0
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoE
translation: MAVNSQQAADREAMRKIVNSYPPERRHILAIMQDLQKHFYYLPKEALQMTAEHVNVPMTVVFSMATFYKAFSLVPKGRVVLKTCDGTACHIKGSNIVIDEIYKILGIKPGETTPDGQFSLETVNCLGCCSLAPVMMVNDQVYGHLTPDKTAEVIKKFSKTEGSGSRGGVEE
SIO_010081: TPH_RS02140
subclass of: SO_0000673
so part of: TPH_RS02140
location: 433483..433998
location: region:433483-433998:1
so has part: feature:433483-433998:1:exon

WP_015049585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433483-433998:1:exon

TPH_RS02145
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02145
old locus tag: Tph_c04210
so part of: sequence
location: 433995..435749
location: region:433995-435749:1
so has part: feature:433995-435749:1:exon
subclass of: SO_0000010

position:433995:1
position: 433995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435749:1
position: 435749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433995-435749:1:exon

TPH_RS02145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02145
old locus tag: Tph_c04210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015051235.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S binding protein
translation: MRVRVGMGSCGLAAGAREVMEQVKEEITSRGLNIQVQPTGCIGMCHHEPLLDVVTDDGVYTYGHVTPEVVKAIFDEHIVGKKPLEKYLVNSPEHQNEFLAGQVRIALRDCGIINLWQIADYEEHGGYQGLRKAITTMTPEEVINEIKEAGLRGRGGGGFPTWFKWQAARQNEGAQKYVVCNADEGDPGAFMDRSILEGDPHTVIEGMIICAYAIGATAGFIYVRDEYDLAVKNLTNAIMEARRHGYLGKNILGSELSFDIEIVRGGGAFVCGEETALINSIQGNVGEPWDKYVFPTEKGLWGQPTVINNVETWANVPVIIREGAAKFASIGTEGSKGTKVFSLVGKVVKAGLVEVPMGTTLREIIFDIGGGIQNGRKFKAVQTGGPSGGCIPESLLDLPVDFDTLTQAGSMMGSGGMIVMDDRTCMVEVARYYVNFLAGESCGKCVPCREGISLLLETLTRICEGKGKLEDLDLLESMSSTIQKAALCALGRTAPNPVLSTLKYFRDEYLEHINNHRCPAGICKELTEFYIDEELCTGCGRCRRNCPADAITGEKKKAHTIDPEKCIKCGECIDNCRFQAVKVK
SIO_010081: TPH_RS02145
subclass of: SO_0000673
so part of: TPH_RS02145
location: 433995..435749
location: region:433995-435749:1
so has part: feature:433995-435749:1:exon

WP_015049586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433995-435749:1:exon

TPH_RS02150
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02150
old locus tag: Tph_c04220
so part of: sequence
location: 435761..436504
location: region:435761-436504:1
so has part: feature:435761-436504:1:exon
subclass of: SO_0000010

position:435761:1
position: 435761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436504:1
position: 436504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435761-436504:1:exon

TPH_RS02150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02150
old locus tag: Tph_c04220
inference: COORDINATES: protein motif:HMM:NF024900.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2Fe-2S iron-sulfur cluster-binding protein
translation: MKVRIDGKKIEANLGETILEAAKRAGVEIPTLCYNEAFGGQGVCRMCMVEVKEGDRKRLVASCTYPITGEIEVQTNTPELREIRRNIVTLLYRRAPNSDFMKKLYQEYEGTAVEPVDPEESCIMCRLCVKACEKVGAYAISTIMRGTEKRVATPFDEASPACIGCSACADICPTRSIAVRKENGRLEIWHKSFEMYRCEVCGNCFSTLPVKEHVREQLDFVVSGENLCPNCRRKKLAGDVAEVSKNK
SIO_010081: TPH_RS02150
subclass of: SO_0000673
so part of: TPH_RS02150
location: 435761..436504
location: region:435761-436504:1
so has part: feature:435761-436504:1:exon

WP_015049587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:435761-436504:1:exon

TPH_RS02155
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02155
old locus tag: Tph_c04230
so part of: sequence
location: 436801..438018
location: region:436801-438018:1
so has part: feature:436801-438018:1:exon
subclass of: SO_0000010

position:436801:1
position: 436801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438018:1
position: 438018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436801-438018:1:exon

TPH_RS02155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02155
old locus tag: Tph_c04230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003868132.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron-containing alcohol dehydrogenase
translation: MWETKMNINQVVEIRARTLCYFGVGALQKVNDICDWLKKEEIDKVLICTDKTVYKVTGVWDVLEPAMKKRGITWTMFDEVVPNPTVDGIDTAVKMGKELGAGAVIGIGGGSPIDTCKSAAVLLHPENAQYNARDLYTFKFNAEKAVPIIAINTTHGTGTEVDRFAVASIPEKEYKPALAVDCIYPVFAIDDPAVMTGLPANQTRYTAVDAVNHVNEAATSLVTSPYTVLMAKETVRLIARYLPQAVAHPDDLTARYYLLYASMIAGIGFDNGLLHFTHAMEHPLSAVKPDLPHGLGLAMLLPAVIKHTYPAVPEILAAIYEPIVPGLQGVPGEAEECAVGVEHWLFNVGVTEKLEDMGYTEKDIDKLVHLAFNTPSLGLLLSMAPIKADERVVRAIFEDSMKPLA
SIO_010081: TPH_RS02155
subclass of: SO_0000673
so part of: TPH_RS02155
location: 436801..438018
location: region:436801-438018:1
so has part: feature:436801-438018:1:exon

WP_015049588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:436801-438018:1:exon

TPH_RS15880
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15880
pseudo: true
so part of: sequence
location: complement(438189..>438664)
location: region:438189-438664:-1
so has part: feature:438189-438664:-1:exon
subclass of: SO_0000010

position:438189:-1
position: 438189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438664:-1
position: 438664
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438189-438664:-1:exon

TPH_RS15880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012281191.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: TPH_RS15880
subclass of: SO_0000673
so part of: TPH_RS15880
location: complement(438189..>438664)
location: region:438189-438664:-1
so has part: feature:438189-438664:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:438189-438664:-1:exon

TPH_RS02160
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02160
old locus tag: Tph_c04250
so part of: sequence
location: 439325..439741
location: region:439325-439741:1
so has part: feature:439325-439741:1:exon
subclass of: SO_0000010

position:439325:1
position: 439325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439741:1
position: 439741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439325-439741:1:exon

TPH_RS02160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02160
old locus tag: Tph_c04250
inference: COORDINATES: protein motif:HMM:NF013828.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MLTLFPSSVLTEIATQNVIMVGNLSTGKMHLSIDLGVAACRDATGSAYYSAPALAPELAEAQDKYQLRRIEQGINKAALLIIDDLSYITFNRRHSELLFKLIAERAERASIIISTNLEFSRWTELFEDPMLRAALVDR
SIO_010081: TPH_RS02160
subclass of: SO_0000673
so part of: TPH_RS02160
location: 439325..439741
location: region:439325-439741:1
so has part: feature:439325-439741:1:exon

WP_015049590.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439325-439741:1:exon

TPH_RS02165
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02165
old locus tag: Tph_c04260
so part of: sequence
location: 439965..441113
location: region:439965-441113:1
so has part: feature:439965-441113:1:exon
subclass of: SO_0000010

position:439965:1
position: 439965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441113:1
position: 441113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439965-441113:1:exon

TPH_RS02165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02165
old locus tag: Tph_c04260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049938.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron-containing alcohol dehydrogenase
translation: MEIFKFMVPEIIFGRGTLKLVGESAKRLGATRIFLVSDEGVLSAGWVDEAVKHLKDIGLEYQVWTEPTENPKDFEIDHGKELYLETGYDAVVGLGGGSAIDAAKAVAILATNGGKIHDYVGVDKIEKPLPPLICVATTAGAAAEVTQFAIIVDSHRKVKMTIGSKSLVPDIAIVDPILLSTKDARLTANTGIDALTHAIEAYVSVAATPVTDVNALKAIGIISTALRASVASRTNIKAKTEMAMASLLAGVAMSNAILGAVHAMAHPLGGLLNLPHGEVNSILLPHVMRYNLIACMDRYADIARALGEKIDGMSTREAAERAVQAVEQLCQDIGAKRRLSEIGLQEEYIPELSKAAAEDVCLITNPRDASVDDIAAIYRAAL
SIO_010081: TPH_RS02165
subclass of: SO_0000673
so part of: TPH_RS02165
location: 439965..441113
location: region:439965-441113:1
so has part: feature:439965-441113:1:exon

WP_015049591.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439965-441113:1:exon

TPH_RS02170
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02170
old locus tag: Tph_c04270
so part of: sequence
location: 441210..441286
location: region:441210-441286:1
so has part: feature:441210-441286:1:exon
subclass of: SO_0000663

position:441210:1
position: 441210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441286:1
position: 441286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441210-441286:1:exon

TPH_RS02170
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1089553
locus tag: TPH_RS02170
old locus tag: Tph_c04270
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.9
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:441244..441246,aa:Pro,seq:tgg)
SIO_010081: TPH_RS02170
subclass of: SO_0000673
so part of: TPH_RS02170
location: 441210..441286
location: region:441210-441286:1
so has part: feature:441210-441286:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441210-441286:1:exon

TPH_RS02175
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02175
old locus tag: Tph_c04280
so part of: sequence
location: 441350..441423
location: region:441350-441423:1
so has part: feature:441350-441423:1:exon
subclass of: SO_0000663

position:441350:1
position: 441350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441423:1
position: 441423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441350-441423:1:exon

TPH_RS02175
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1089553
locus tag: TPH_RS02175
old locus tag: Tph_c04280
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.9
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:441382..441384,aa:Gly,seq:tcc)
SIO_010081: TPH_RS02175
subclass of: SO_0000673
so part of: TPH_RS02175
location: 441350..441423
location: region:441350-441423:1
so has part: feature:441350-441423:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441350-441423:1:exon

TPH_RS02180
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02180
old locus tag: Tph_c04290
so part of: sequence
location: 441434..441510
location: region:441434-441510:1
so has part: feature:441434-441510:1:exon
subclass of: SO_0000663

position:441434:1
position: 441434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441510:1
position: 441510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441434-441510:1:exon

TPH_RS02180
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1089553
locus tag: TPH_RS02180
old locus tag: Tph_c04290
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.9
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:441468..441470,aa:Arg,seq:tct)
SIO_010081: TPH_RS02180
subclass of: SO_0000673
so part of: TPH_RS02180
location: 441434..441510
location: region:441434-441510:1
so has part: feature:441434-441510:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441434-441510:1:exon

TPH_RS15315
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15315
so part of: sequence
location: 442435..442635
location: region:442435-442635:1
so has part: feature:442435-442635:1:exon
subclass of: SO_0000010

position:442435:1
position: 442435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442635:1
position: 442635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442435-442635:1:exon

TPH_RS15315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15315
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNRHEFYRPLAERTLLNYQVQYLAHRYFGKESPVARLLVEEINRRMEERAAGATSAHHRPLRRNEG
SIO_010081: TPH_RS15315
subclass of: SO_0000673
so part of: TPH_RS15315
location: 442435..442635
location: region:442435-442635:1
so has part: feature:442435-442635:1:exon

WP_028991143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442435-442635:1:exon

TPH_RS02200
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02200
old locus tag: Tph_c04310
so part of: sequence
location: complement(443014..443313)
location: region:443014-443313:-1
so has part: feature:443014-443313:-1:exon
subclass of: SO_0000010

position:443014:-1
position: 443014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443313:-1
position: 443313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443014-443313:-1:exon

TPH_RS02200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02200
old locus tag: Tph_c04310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006317359.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MMYKVIILPPAARFLKKLKEKPLKAAFQKAVDEILKNPYIGEPKTGDLSGIFCYDIYYNETNYELAYTIIEEDDSTIVVILAGTRENFYEELKRYMKNL
SIO_010081: TPH_RS02200
subclass of: SO_0000673
so part of: TPH_RS02200
location: complement(443014..443313)
location: region:443014-443313:-1
so has part: feature:443014-443313:-1:exon

WP_201764478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443014-443313:-1:exon

TPH_RS02205
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02205
old locus tag: Tph_c04320
so part of: sequence
location: complement(443310..443651)
location: region:443310-443651:-1
so has part: feature:443310-443651:-1:exon
subclass of: SO_0000010

position:443310:-1
position: 443310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443651:-1
position: 443651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443310-443651:-1:exon

TPH_RS02205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02205
old locus tag: Tph_c04320
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MLKKRISVSKKRQITIPIEFFNRLGIEKEVECYLQNNAIVIRPVRENTGEFDEQILADLISQGLSGTELLEKFKEMRRKVRPAVERLLDEAHLAAAGKARFFTYEDVFGEENE
SIO_010081: TPH_RS02205
subclass of: SO_0000673
so part of: TPH_RS02205
location: complement(443310..443651)
location: region:443310-443651:-1
so has part: feature:443310-443651:-1:exon

WP_015049593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443310-443651:-1:exon

TPH_RS16160
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS16160
old locus tag: Tph_c04330
so part of: sequence
location: 443866..443988
location: region:443866-443988:1
so has part: feature:443866-443988:1:exon
subclass of: SO_0000010

position:443866:1
position: 443866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443988:1
position: 443988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443866-443988:1:exon

TPH_RS16160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS16160
old locus tag: Tph_c04330
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDCVIVVMDEKREKYLNIALNKVQGDCDKRFIAGTGQVHI
SIO_010081: TPH_RS16160
subclass of: SO_0000673
so part of: TPH_RS16160
location: 443866..443988
location: region:443866-443988:1
so has part: feature:443866-443988:1:exon

WP_015049594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443866-443988:1:exon

TPH_RS02210
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: tnpA
locus tag: TPH_RS02210
old locus tag: Tph_c04340
so part of: sequence
location: 444112..444513
location: region:444112-444513:1
so has part: feature:444112-444513:1:exon
subclass of: SO_0000010

position:444112:1
position: 444112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444513:1
position: 444513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444112-444513:1:exon

TPH_RS02210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: tnpA
locus tag: TPH_RS02210
old locus tag: Tph_c04340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015739658.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
translation: MNGKRWKRSATTVYNIGYHLIWCSKYRRKVLVSEVAERLKELLLQKARGIGVEIVQMEVMPDHVHLFVKTDPTNSPHFIVHQLKAYTSRVLRKEFPFLKSRLPSLWTRSYYCESVGHISEETIRKYIEDQKGK
SIO_010081: TPH_RS02210
subclass of: SO_0000673
so part of: TPH_RS02210
location: 444112..444513
location: region:444112-444513:1
so has part: feature:444112-444513:1:exon

WP_015049595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444112-444513:1:exon

TPH_RS02215
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02215
old locus tag: Tph_c04350
so part of: sequence
location: 444591..445757
location: region:444591-445757:1
so has part: feature:444591-445757:1:exon
subclass of: SO_0000010

position:444591:1
position: 444591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445757:1
position: 445757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444591-445757:1:exon

TPH_RS02215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02215
old locus tag: Tph_c04350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049596.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MYELKLQNLSKRKSEVLRKAFLEAKWLYNWLVSDTERLDTPANKVSAVEVKAGDSYEERELTVLGSQIKQEIADRLKDNLRVLGKLKKNGQKVGALKCKRFVNSIPLKQYGVTYSLNFARNRVRIQKLGKFRVLGLHQIPADAEIANAVLVRKPSGYYLHVTCYLPKDSRTSPNPVGKDIGIDFGVGSKLTLSNGIRMDFEVHETPRLKQLQRKLAGTQKGSRNRERIRFLLRKEYEKLNNRRKDAQNKALAFLKIYRKVVFQDDCVKGWSVLFGRQVYSSGIGGLKSRLRTSLETPVVVERTETTTGECFACGKRRDLSLSDRVIECECGWKCDRDVNAALVILRKGLGLGPEQAVGLDRPELKPPEREAAARILGSNPYIRVSFPR
SIO_010081: TPH_RS02215
subclass of: SO_0000673
so part of: TPH_RS02215
location: 444591..445757
location: region:444591-445757:1
so has part: feature:444591-445757:1:exon

WP_236608811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444591-445757:1:exon

TPH_RS02220
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02220
old locus tag: Tph_c04360
so part of: sequence
location: 445782..447296
location: region:445782-447296:1
so has part: feature:445782-447296:1:exon
subclass of: SO_0000010

position:445782:1
position: 445782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447296:1
position: 447296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445782-447296:1:exon

TPH_RS02220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02220
old locus tag: Tph_c04360
inference: COORDINATES: protein motif:HMM:NF012235.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MGGGHDGSTSPALEGINLKVYPGELLAITGPSGCGKSTLALCLAGFIPHAYGGKMEGVVRIQGRDTRDYPAGGLSGIVGLVQQDPDAQLCTLTVSDEVAFGPENLCIPPEEIRERVHFALQAVGALDLKDRKVHTLSGGEKQRVAIASVLAMTPVLLILDEPTANLDPSCTREVLRTMEKLREEQGISIIVIEHRLERLVPISDRLLLMEKGRIVEESTDRKLHRRYLPAAGWTDSGTDLRQGEPAGLEKKGEKQPLLSVENLQAGYEGREVLKGISFCAYPGETLAIMGDNGSGKTTLLLALLGVLKPGEGRIFLNGKDITGMRVARRARDLGLVFQNPNHQIFENTVFKEAVLPSLFLSKEAPREIEQKVERLLEEFGLRRFRDNNPFALSLGEKKRLTLVSVLAYSPGVLILDEPLVGQDGDRLKLLISALEEHRAQGGVTLMVCHEPAVVVACCQRVLFLSEGKLIVDAPVKEALLRLAELGREEYLPSGYRLTSAGERG
SIO_010081: TPH_RS02220
subclass of: SO_0000673
so part of: TPH_RS02220
location: 445782..447296
location: region:445782-447296:1
so has part: feature:445782-447296:1:exon

WP_037999118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:445782-447296:1:exon

TPH_RS02225
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02225
old locus tag: Tph_c04370
so part of: sequence
location: 447303..448136
location: region:447303-448136:1
so has part: feature:447303-448136:1:exon
subclass of: SO_0000010

position:447303:1
position: 447303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448136:1
position: 448136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447303-448136:1:exon

TPH_RS02225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02225
old locus tag: Tph_c04370
inference: COORDINATES: protein motif:HMM:NF014420.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: energy-coupling factor transporter transmembrane component T
translation: MNFNRNTASGRTSSLVKGFFPGLTYVDKRSPVHRIHPLVKLVMLFCFSLTVIATPSWAGETILFCLLMIFYALAGLGPVFISRKLRFIFIFGLLIFLVQILAVKEGILLWDIQLGPVHLSAWSKGLLGGLSMMLRFVNIIGSSYLFVATTDPNRLAYALMQAGLPYRFGFMLVTALRFIPVFYLELEQVKNAQMAKGIEMEGLSPRNLLRAVRYLLVPLVISALSKVDVLAISMESRAFGLYPTRTYMHPQDLSGSDRVAIIAVPLIFLLFYLLFAS
SIO_010081: TPH_RS02225
subclass of: SO_0000673
so part of: TPH_RS02225
location: 447303..448136
location: region:447303-448136:1
so has part: feature:447303-448136:1:exon

WP_015049598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447303-448136:1:exon

TPH_RS02230
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02230
old locus tag: Tph_c04380
so part of: sequence
location: 448205..448945
location: region:448205-448945:1
so has part: feature:448205-448945:1:exon
subclass of: SO_0000010

position:448205:1
position: 448205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448945:1
position: 448945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448205-448945:1:exon

TPH_RS02230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02230
old locus tag: Tph_c04380
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: protein kinase
translation: MPESPAAIGYDFSCFSVEKKFISRKNSVFLVKAGGPGATERYLVCKKYSRPERMAGEAEMLRLLKEKGVSVPQIYGTGKDYILTEYLEGTLLLDRYCLLESSGSDGGSPGEPASRLLRDLCRWFKGFYQASREIAGRQLIMGDVNFRNFIVREKIYGIDLEECREGEIEEDVGSLCAYALTYTPSFTLWKMALVREMLWLFAAELGLDQEFLKREVKKELLVLAGRRGALAEMKKLLAGNLLEKSL
SIO_010081: TPH_RS02230
subclass of: SO_0000673
so part of: TPH_RS02230
location: 448205..448945
location: region:448205-448945:1
so has part: feature:448205-448945:1:exon

WP_015049599.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448205-448945:1:exon

TPH_RS02235
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02235
old locus tag: Tph_c04390
so part of: sequence
location: complement(449060..450289)
location: region:449060-450289:-1
so has part: feature:449060-450289:-1:exon
subclass of: SO_0000010

position:449060:-1
position: 449060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450289:-1
position: 450289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449060-450289:-1:exon

TPH_RS02235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02235
old locus tag: Tph_c04390
inference: COORDINATES: protein motif:HMM:NF021498.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2220 family protein
translation: MNYQNVIINLLLDKYEQSRHFRGNARVNRRVALKFDKKNFPLYDIERVDVKEAIHHAALELQQRGLITVEWMKFEVGNIISRVFLNLEMVAEAYALVNRKGKKDILVEARRKLERLREQVTTPWIKDFCREMLQEIEEKKEMPRYLPREEEKFDLLVRALQGIEQKGEDELLERIFSRRYLGGSKEFERKIRSRLITIVKNYLLPGRDMDDEEVLEHIGLLKTSEELSFFGPLVIDLHGQVIDFSPFCYGASMNAEMIRNFEVSRLPVNRVVTIENKAAYLEYIKNTRPERELVVYLAGFYSPLKRLFLEKIYNHLRKHTPQAAYYHWGDLDLGGFQIFVYLKNLIPELQPLHMDVATLRENARFADTFDDKYRKRLEQLLKQEEYAVFFEVINFMLQAGIKLEQEALV
SIO_010081: TPH_RS02235
subclass of: SO_0000673
so part of: TPH_RS02235
location: complement(449060..450289)
location: region:449060-450289:-1
so has part: feature:449060-450289:-1:exon

WP_015049600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449060-450289:-1:exon

TPH_RS02240
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02240
old locus tag: Tph_c04400
so part of: sequence
location: complement(450249..453656)
location: region:450249-453656:-1
so has part: feature:450249-453656:-1:exon
subclass of: SO_0000010

position:450249:-1
position: 450249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453656:-1
position: 453656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450249-453656:-1:exon

TPH_RS02240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02240
old locus tag: Tph_c04400
inference: COORDINATES: protein motif:HMM:NF024867.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SbcC/MukB-like Walker B domain-containing protein
translation: MKLLQKLLLINWHYIERELIEFSGINFLTGKNASGKSTIIDALQLLFLGDTSGNFFNKAANDYSQRTLKGYLRGEVADDGGTGFIYLRDGVFSSYIVAEFFDTIKKKSFCFGVVFDVYGEDNPTHKFFLLEAPLPEHQFILNNTPMDYHTLRNHLNSTGKIKYQFFDSNRSYRESFLGKMGGLNNKFFTLFKKAVPFSPIMDIEKFICEFVCDVSNRIDISDMQANIRHYKQLELEAGFVKERIERLTVISAKYQDYLIEKERLLQQSYLMDRAQLQESVDRIDALREAIRQNNEKMVSLAAQLEKKEQEIKKLDEKRDRLLKEKFESDLYKKTESLKKQLDDLTAQLKQLDGVRQRLAELITRTGNTWKRALKDYAKHIAPEKAHAYASLQREAAYLSGIKPDGLICPETQGELDAERLQEIRSRMKAFRNEVDALYFDTRSRLEAARNRAAELASEIANLKKGIKPYDAKLLELRREIKNQLQQQYGREVPVEIFCELIEVRDKRWQDALEGYLHTQKFYLLVPPEYFVAALKVYDRLKFERQFYDIGLVDIGKLQELNPKVKQGSLAEEVVTDNPYARVFADYLLGRVIKCERVEDLRQYRTAITPTGMLYHNFTARQINPDRWKVPYIGKQAVKKQIEIKEQELAGLNQEIRKGEFRFEVLEGLKEIDPLGDDTIAHITGSLQQLRTYQDLVGERRQVQEALERIDLSYLEKLDREIEEVEKRRTAVEEQREQLKRENNKLEYENNAIREEKIPAEESRRADCKQRIDEKYDAGWIRETGEPRFLKEMEKRGSPRKIIEAFHSQLERTKNQAERKWQELVRARSDYNRDYKMSYDINLPENTPFDEELTELRDTHLAEYEAKIKDAREKAQKQFQEDFISKLKQNIDTVRGQIEELNDALKNVAFGRESYRFEIKPNPNYKRFYDMITDSMLLEGYNLFSQAFQAKHRDAIDELFKQIVDVGEGDLSADQRAELERNIEKFTDYRTYLQFDLISKDESGRESRLSKTITKKSGGETQTPFYISVLASFVRVYRLQQRYRNKNNTLRLIVFDEAFNKMDHQRIQESIKLLRSFGLQAVICAPTEKIGDIAPLVDRTLCVTRLNNITVVRAFDPRKLEDEDELPERYHQPAAR
SIO_010081: TPH_RS02240
subclass of: SO_0000673
so part of: TPH_RS02240
location: complement(450249..453656)
location: region:450249-453656:-1
so has part: feature:450249-453656:-1:exon

WP_015049601.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:450249-453656:-1:exon

TPH_RS02245
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02245
old locus tag: Tph_c04410
so part of: sequence
location: complement(453660..454304)
location: region:453660-454304:-1
so has part: feature:453660-454304:-1:exon
subclass of: SO_0000010

position:453660:-1
position: 453660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454304:-1
position: 454304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453660-454304:-1:exon

TPH_RS02245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02245
old locus tag: Tph_c04410
inference: COORDINATES: protein motif:HMM:NF025205.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4194 domain-containing protein
translation: MWLDEYEQLTHTEKEEFIRIANQLLSRTFIVRDRYSSKDKCLKLNPDYRFIERHLELFRQYLRLSGWELQKDNNYGVIALYNRFDLNRARLDKRTTLILYVLRLIYEEKREKLSLKREITTSVGEVVEKMINLGLIDKKPPNRDLLNAFGALSRYQIIERLESDVTQPETGIIIYPSILFVVTNEKISEIYELAGADANDEEENTEEILPEAEE
SIO_010081: TPH_RS02245
subclass of: SO_0000673
so part of: TPH_RS02245
location: complement(453660..454304)
location: region:453660-454304:-1
so has part: feature:453660-454304:-1:exon

WP_015049602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453660-454304:-1:exon

TPH_RS02250
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02250
old locus tag: Tph_c04420
so part of: sequence
location: complement(454277..455698)
location: region:454277-455698:-1
so has part: feature:454277-455698:-1:exon
subclass of: SO_0000010

position:454277:-1
position: 454277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455698:-1
position: 455698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454277-455698:-1:exon

TPH_RS02250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02250
old locus tag: Tph_c04420
inference: COORDINATES: protein motif:HMM:NF039513.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5716 family protein
translation: MGLFQVIPENLFSLLSSKNKETYLDGLFVLHRAYKQEMILTKDQVVSMLISELEDKIMEMDLEGEEMVPERNLSALAHFLIRKFHQTGWIALEYATDSFEEQITLYDYSIKILNTLHDLLDTTPREYNSLVYSTYSLLKTANEERDMYTYNALIQAYKNTNSLVDELKSLLNNIRRYHQALLDQTEVKGILKEHFDSFKEMIEDKIYHPLKTFDSVPRFKAPIINILKGWLADPAILDLLVTSARRRRQDKDEDALLEETIVMIEEIIGVYEGIDILLKEIDRKKAAYTRASVEKMEYLLNTDRSIKGKLVEILKAAGEKGEESRLQQMMQESLNLFPQRFLDEASLYSRQKPRAREPGQPLKMSQAVDDTLLEKELDDLLNRAKNSYSTRRIMNFMERQFAGRQVIETGDLIIRGDEDFIMVILGILKHDEAAAFYRIEFLPGYLLVNGYRLPMMRLSRKDAAPCGLMNTSS
SIO_010081: TPH_RS02250
subclass of: SO_0000673
so part of: TPH_RS02250
location: complement(454277..455698)
location: region:454277-455698:-1
so has part: feature:454277-455698:-1:exon

WP_015049603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:454277-455698:-1:exon

TPH_RS02255
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02255
old locus tag: Tph_c04430
so part of: sequence
location: 455931..456278
location: region:455931-456278:1
so has part: feature:455931-456278:1:exon
subclass of: SO_0000010

position:455931:1
position: 455931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456278:1
position: 456278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455931-456278:1:exon

TPH_RS02255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02255
old locus tag: Tph_c04430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011392816.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysM domain-containing protein
translation: MKVQERRPPCPSGRYWQVRAGDTLYSIARQLGTTLDELLRLNPGVDPSNLRIGHFLCLPEEFPPCPSGVYWVVAPGDTLYRIAQATGTTVDALLKANPGIDPLNLQVGQKICLPG
SIO_010081: TPH_RS02255
subclass of: SO_0000673
so part of: TPH_RS02255
location: 455931..456278
location: region:455931-456278:1
so has part: feature:455931-456278:1:exon

WP_037999593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455931-456278:1:exon

TPH_RS02260
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02260
old locus tag: Tph_c04440
so part of: sequence
location: 456832..458595
location: region:456832-458595:1
so has part: feature:456832-458595:1:exon
subclass of: SO_0000010

position:456832:1
position: 456832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458595:1
position: 458595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456832-458595:1:exon

TPH_RS02260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02260
old locus tag: Tph_c04440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015739421.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chloride channel protein
translation: MMLVKIKNLDLHLDYLRKWLLIATAIGVVAGVGAIAFYEAIHWSTYLFLQLGVGYTPPAPLGEGKLVVTGISRRWMIPVVTTLGGLLSGLIVFRFAPEAEGHGTDAAIEAFHYKDGIIRARVPLIKVIASAITIGSGGSAGREGPTAQIAAGFGSLMGQLLRLNTDDRRIALATGIGAGIGAIFKAPLGGALLSTEILYLEGFEIQALVPSFIASLIGYTIFASYAGYTPVFGWMSQQVSFHPITLLYYSLLGVLGGLIGILYVRTFYATRNYFRELNMPKWLKPAVGGLLAGIIGLFLPQVLGMGYGWLQLGMLNNPLPLTITLLLIFAKILSTSLSIGSGGSGGVFAPGLFIGGMLGTGLWQLLHRVVAYVPASPAPFIVVGMMALFGAVARAPLAVMFMVGEMTGGYALLVPAMIAVGIAYVLVGNNTIYESQVPTPADSPAHRFDCYFPQLEKVMVKEVMSTDIPVVTPRDSVKYCWEILKRRKLNDLAVVGGKNNAQLVGVVAKEDIVRLPLQQWQTTLVGQVMSAPPVVVAPEVTLDRALTLMADNDIAFLPVLAEGKLVGMVTRSRIIRHYLLAVQRVSA
SIO_010081: TPH_RS02260
subclass of: SO_0000673
so part of: TPH_RS02260
location: 456832..458595
location: region:456832-458595:1
so has part: feature:456832-458595:1:exon

WP_015049605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:456832-458595:1:exon

TPH_RS02265
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: arsM
locus tag: TPH_RS02265
old locus tag: Tph_c04450
so part of: sequence
location: complement(458987..459796)
location: region:458987-459796:-1
so has part: feature:458987-459796:-1:exon
subclass of: SO_0000010

position:458987:-1
position: 458987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459796:-1
position: 459796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458987-459796:-1:exon

TPH_RS02265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: arsM
locus tag: TPH_RS02265
old locus tag: Tph_c04450
inference: COORDINATES: protein motif:HMM:NF008823.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arsenite methyltransferase
translation: MSEKSKEIRDQVKDYYGEIAAKLQQGKSSCCCGPSCCTPIVDPESLYKEHLDGLPAEAVNASLGCANPLAIAGLKEGETVLDLGSGGGIDVLAASRYVGQSGKVYGLDMTEEMLELANQNRELMGATNVEFLKGFIEEIPLPDEAVDVVISNCVINLSGDKEKAFREVYRVLKPGGRLAIADILALKKVPDSIRRMTEMWVGCIAGALHIDTCREMLSRAGFQKIEVQPARSYTKEMLKSLAGNRVKITDAEWESIDGAFAASYIKAAK
SIO_010081: TPH_RS02265
subclass of: SO_0000673
so part of: TPH_RS02265
location: complement(458987..459796)
location: region:458987-459796:-1
so has part: feature:458987-459796:-1:exon

WP_015049606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458987-459796:-1:exon

TPH_RS02270
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02270
old locus tag: Tph_c04460
so part of: sequence
location: complement(459812..460255)
location: region:459812-460255:-1
so has part: feature:459812-460255:-1:exon
subclass of: SO_0000010

position:459812:-1
position: 459812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460255:-1
position: 460255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459812-460255:-1:exon

TPH_RS02270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02270
old locus tag: Tph_c04460
inference: COORDINATES: protein motif:HMM:NF024854.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MarR family winged helix-turn-helix transcriptional regulator
translation: MDTSSDLLRLRQLLRLLTGKIGLLDKSESSCCGITYSQCHALVAIGEKGCLSLNDLAELLGLDKSTVSRTVNTMVEQGLVKREEDPEDRRYVKIGLTEAGSRMLSAIESRMAECYRNIYQALPQDKRRQVLESLELLIKAIQNEHCC
SIO_010081: TPH_RS02270
subclass of: SO_0000673
so part of: TPH_RS02270
location: complement(459812..460255)
location: region:459812-460255:-1
so has part: feature:459812-460255:-1:exon

WP_015049607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459812-460255:-1:exon

TPH_RS15320
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15320
so part of: sequence
location: 460320..460478
location: region:460320-460478:1
so has part: feature:460320-460478:1:exon
subclass of: SO_0000010

position:460320:1
position: 460320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460478:1
position: 460478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460320-460478:1:exon

TPH_RS15320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15320
inference: COORDINATES: protein motif:HMM:NF036547.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGFSFDDFIEGVERDVITMAFQQYGSSRRVARALKISQTKASRLIRKYCSQA
SIO_010081: TPH_RS15320
subclass of: SO_0000673
so part of: TPH_RS15320
location: 460320..460478
location: region:460320-460478:1
so has part: feature:460320-460478:1:exon

WP_269077490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460320-460478:1:exon

TPH_RS02275
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02275
old locus tag: Tph_c04470
so part of: sequence
location: 460980..462470
location: region:460980-462470:1
so has part: feature:460980-462470:1:exon
subclass of: SO_0000010

position:460980:1
position: 460980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462470:1
position: 462470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460980-462470:1:exon

TPH_RS02275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02275
old locus tag: Tph_c04470
inference: COORDINATES: protein motif:HMM:NF018012.2
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: trimethylamine methyltransferase family protein
translation: MTRRNKKAGITSVNGFGLNVFTEDELDMIHYATLELLWDTGIKVESREAFEIFLGGGAKGEWHGSYGIVKIPSYVVEECIRWAPRTVVFYGRDAEKDYAAEPGRVGFSTFGECVQIIDPETKEVRRSVKSDLAGATLMCDYLDEMVVVERALCSSDQYPDTQPLHNYEAMVANTSKHCFLGFGSGENAKKIIAMAAACAGGMDKFRERPIVTAFVCPTSPLTLVQNCCDVIVECARGGVGLAIIPMALSGATAPVTLAGTIVQHNAEVLGALILAQLTRRGTPCTYSSCSTIMDLRFTTTAVGAPEYGIISAGLARLARYYRLPSWVGGGHSDSKLPDAQAAYEFSLTAAVAALAGANIVYGAGCLESGLTFDYAKLLMDAEQIRNIFQVLKGIDVSDETIALDVIKAVGPGGEFMTHQHTFRHMKAMSMSVLFDRRNRASWMERTKGKDLTERAYEEARHVLATHKPAPLPAGAAETMRTIIEEYEAELKARKGN
SIO_010081: TPH_RS02275
subclass of: SO_0000673
so part of: TPH_RS02275
location: 460980..462470
location: region:460980-462470:1
so has part: feature:460980-462470:1:exon

WP_015049608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460980-462470:1:exon

TPH_RS02280
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02280
old locus tag: Tph_c04480
so part of: sequence
location: complement(462546..463385)
location: region:462546-463385:-1
so has part: feature:462546-463385:-1:exon
subclass of: SO_0000010

position:462546:-1
position: 462546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463385:-1
position: 463385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462546-463385:-1:exon

TPH_RS02280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02280
old locus tag: Tph_c04480
inference: COORDINATES: protein motif:HMM:NF020927.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoenolpyruvate hydrolase family protein
translation: MAKSFTRRQVLERLRKESDAGRPLLMFGAGTGLTARCAELGGADIIAVYSTAYYRMQAQPSLLAWLPYENANELVIRMAAEVLPAVKETPCIAGVGAHDPRLDMEAIIDRLLGMGFSGITNEPFVGIYGSEFAAQLEAAGLGFSREVELIKTAHEKDVFTVAWAFTPEEGRVMAAAGADVIGAIVGVTAGGLTGAKKAQTLEEAARQVREISRAAREVNPEIIVLTHGGPFKDVETAEYSLLHTDAAGYASGSSGERMPTETAVTEITRRYKRMKKGSG
SIO_010081: TPH_RS02280
subclass of: SO_0000673
so part of: TPH_RS02280
location: complement(462546..463385)
location: region:462546-463385:-1
so has part: feature:462546-463385:-1:exon

WP_015049609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:462546-463385:-1:exon

TPH_RS02285
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02285
old locus tag: Tph_c04490
so part of: sequence
location: complement(463426..464769)
location: region:463426-464769:-1
so has part: feature:463426-464769:-1:exon
subclass of: SO_0000010

position:463426:-1
position: 463426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464769:-1
position: 464769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463426-464769:-1:exon

TPH_RS02285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02285
old locus tag: Tph_c04490
inference: COORDINATES: protein motif:HMM:NF018498.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tm-1-like ATP-binding domain-containing protein
translation: MTGKPQILVAGILDTKGQEIKYLAERVKAAGGEPTILELSVGDEVGWADIGVGAVLQKIGRNKEEVFSLDRGKASDIIVEGAKKIAAELLEEGKLDGMIAYGGSMGASMATRIMQSLPIGIPKLMLTTMASGDVSPYVGTKDICMMYPIAEAGLNKVTRRILNNAAGAVVGMASAPELEAGEERPLIGCMMFGVTTPCVLRASRYFEEKGYDVLINHAVGSGGRSLEELIRDGYIVGVLDITTHEIGDHLLGGVLDAGPDRLTAAAQMGIPQVVAPGGLDLINFGPKETVPERLLKETDQPGRGLYIHNPTVTCVGVSAEEAYKVGEHIANKLNAATGPTVLCVPMRGWGACDLPAPNKALGWAGPGPGPVWASDPDHPQWSLRAGHFVAALRKVIDRNKPNLDVLLVDKHLNEPEFADLMAELLDEMLAGKWRKGSHHDLPYVLKF
SIO_010081: TPH_RS02285
subclass of: SO_0000673
so part of: TPH_RS02285
location: complement(463426..464769)
location: region:463426-464769:-1
so has part: feature:463426-464769:-1:exon

WP_015049610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:463426-464769:-1:exon

TPH_RS02290
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02290
old locus tag: Tph_c04500
so part of: sequence
location: complement(464766..465542)
location: region:464766-465542:-1
so has part: feature:464766-465542:-1:exon
subclass of: SO_0000010

position:464766:-1
position: 464766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465542:-1
position: 465542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464766-465542:-1:exon

TPH_RS02290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02290
old locus tag: Tph_c04500
inference: COORDINATES: protein motif:HMM:NF015962.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-phosphosulfolactate phosphatase
translation: MRRDKLTIDVALAPAEVSPEFLEMACIVVDVLRASSTIVTLLDKRCRLVYTVEEVADARSLARSQGLLLGGERNGLTVRGFDFGNSPSEVEGFPPGDRAAVLTTTNGTRTVAAVASAPAVLIGCFLNAHACCQSALELSRRYSTDIGIVCAGEKGKFVLDDAFCAGYLVETLRLLAEKDGLEVTLSDAAQAAGRLYQSYPDIMAAFAESFSGRRLKEINRTVDLELCSRLNTTEVVPILIARSPCCFINRSRKEENTR
SIO_010081: TPH_RS02290
subclass of: SO_0000673
so part of: TPH_RS02290
location: complement(464766..465542)
location: region:464766-465542:-1
so has part: feature:464766-465542:-1:exon

WP_015049611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464766-465542:-1:exon

TPH_RS02295
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02295
old locus tag: Tph_c04510
so part of: sequence
location: complement(465615..466457)
location: region:465615-466457:-1
so has part: feature:465615-466457:-1:exon
subclass of: SO_0000010

position:465615:-1
position: 465615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466457:-1
position: 466457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465615-466457:-1:exon

TPH_RS02295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02295
old locus tag: Tph_c04510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003869363.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoenolpyruvate hydrolase family protein
translation: MAKQYSRAEVLKRLKKTIAEGKPVIIAGAGTGISGKFAERGGADLIGVYNSGLYRMDGNGSLAGLMPYGNANQIVIDLANRVMPVVKETPMIAGICGTDPTREMRPYLKHLLELGFSGVMNFPTVGLIDGRFRRELEDTGMGYGKEIEALKLASELGFFTLGYAFNVEEAALVGEAKLDVLICHMGLTRGGSIGSKYAEEEMTLEGAAALINEMTKAAREKNPDVLIFAHGGPIALPEDTAYIYKNTEAVGFLGASSIERIPVEKPLAEAVKKFKDIPLK
SIO_010081: TPH_RS02295
subclass of: SO_0000673
so part of: TPH_RS02295
location: complement(465615..466457)
location: region:465615-466457:-1
so has part: feature:465615-466457:-1:exon

WP_015049612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465615-466457:-1:exon

TPH_RS02300
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02300
old locus tag: Tph_c04520
so part of: sequence
location: complement(466481..467797)
location: region:466481-467797:-1
so has part: feature:466481-467797:-1:exon
subclass of: SO_0000010

position:466481:-1
position: 466481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467797:-1
position: 467797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466481-467797:-1:exon

TPH_RS02300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02300
old locus tag: Tph_c04520
EC number: 5.3.2.5
inference: COORDINATES: protein motif:HMM:NF007095.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase
translation: MSELAMLALHEQIEEEGGYVIATYYLETGRGADIVKKISAIAVEQTTGTWVPVPEETPEMREKHVAKVVGIYEVPGHEFEVPGNLEARQFIFQLAYPAVNFGPQIPMLLSTVIGNISMSGKLKLLDLKFPKSFLKSFKGPKFGTQGIRELLGIPERPLLNNMIKPCTGYTPEVGARLFSQAIRGGVDIVKDDELIADPPFCPMVERVKLYMAEARRYYEETGNKVLYTVNITDRADKVKENAKRALDAGANALMINYLTAGITALQSLAEDPEINVPILAHLDFAGTMYESPYSGLSSYLILGKLARLAGADIVVYPSPFGKFPFLRERYLQIGHHLLGKWLHFKPTFPMPGGGVMPAVVPAIIRDLGKDCILGAGGAIHGHPMGPVAGGKAMRQAIDAALQGIPIREAAEQHPELKSAIEAWGLMEDEEQALFEIKQ
SIO_010081: TPH_RS02300
subclass of: SO_0000673
so part of: TPH_RS02300
location: complement(466481..467797)
location: region:466481-467797:-1
so has part: feature:466481-467797:-1:exon

WP_015049613.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:466481-467797:-1:exon

TPH_RS02305
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02305
old locus tag: Tph_c04530
so part of: sequence
location: complement(468141..468731)
location: region:468141-468731:-1
so has part: feature:468141-468731:-1:exon
subclass of: SO_0000010

position:468141:-1
position: 468141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468731:-1
position: 468731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468141-468731:-1:exon

TPH_RS02305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02305
old locus tag: Tph_c04530
inference: COORDINATES: protein motif:HMM:NF016216.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol-3-phosphate responsive antiterminator
translation: MAHTERKTQLLNLLQNHPVIPSLRREEQLPFLLKSNARVALLSSGSIFNIESLVQELHRAGKVALVHIDLIDGLGRDAAAVRFLKEKAGADGIVTPNRHLISEGRKEHLITIHRLFAHDSPSLESGLKVLQMSNPDFIEFLPGMMASRVIPFLRQHFSQPLIGAGLVKTPEEVMAILKAGAVAVNTSADALWNLKL
SIO_010081: TPH_RS02305
subclass of: SO_0000673
so part of: TPH_RS02305
location: complement(468141..468731)
location: region:468141-468731:-1
so has part: feature:468141-468731:-1:exon

WP_015049614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:468141-468731:-1:exon

TPH_RS15605
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15605
old locus tag: Tph_c04540
so part of: sequence
location: complement(468873..469325)
location: region:468873-469325:-1
so has part: feature:468873-469325:-1:exon
subclass of: SO_0000010

position:468873:-1
position: 468873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469325:-1
position: 469325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468873-469325:-1:exon

TPH_RS15605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15605
old locus tag: Tph_c04540
inference: COORDINATES: protein motif:HMM:NF015956.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FeoA family protein
translation: MKCSFCGYEFNEGGLRPCAACPFKAGCGKVKCPNCGYEVPGESFFRRWYRHRNRWGAGKRRWMEQHGYQRQEMLLAELNSGEQGIVSRIATDNPAILNKLMALGILPGMPVKMLQKSPSYVFQVGNTRITADGNIVASVLVRKGEKGAAD
SIO_010081: TPH_RS15605
subclass of: SO_0000673
so part of: TPH_RS15605
location: complement(468873..469325)
location: region:468873-469325:-1
so has part: feature:468873-469325:-1:exon

WP_015049615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:468873-469325:-1:exon

TPH_RS02315
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02315
old locus tag: Tph_c04550
so part of: sequence
location: complement(469463..470929)
location: region:469463-470929:-1
so has part: feature:469463-470929:-1:exon
subclass of: SO_0000010

position:469463:-1
position: 469463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470929:-1
position: 470929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469463-470929:-1:exon

TPH_RS02315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02315
old locus tag: Tph_c04550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013780318.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferrous iron transporter B
translation: MSESVLPDQGFKLRYDETIEKALTEIEKLLRARYAFSRRMIALLLLQEDEEVLKAVKSREPNFPQIFNVIRSTREKYREHLRYVITLQRQQHANSILSQVVQDTPVKGSRLNKWLDGITIRPLTGVPLLLLIMYFGLYKFVGQFGAGTLVDFIEGRLFEGYINPWINQLVAETIPWPSIRALLAFDYGIFTLGLRYAVAIILPIVGTYFLAFSLLEDSGYLPRLALLVDAVFKKIGLNGRAVIPLTLGFACDTMATLVSRTLETKRERIIATLLLALAIPCSAQLGVMLGLLAERPAALVTWAGFVILVFLLVGYLSAKVMPGEGPAFYMELPPLRVPRLANILEKTLSRMQWYFMEIVPFFIAASVLIWAGKITGVFDAIINGAAPLMHALGLPSQAAEVFLFGFFRRDYGAAGLYDLQKSGALSGVQLVVTAVTLTLFVPCIAQFAIMLKERGWRTALAIAGFIFPFAFLCGIVLNLVLTTLGLSL
SIO_010081: TPH_RS02315
subclass of: SO_0000673
so part of: TPH_RS02315
location: complement(469463..470929)
location: region:469463-470929:-1
so has part: feature:469463-470929:-1:exon

WP_015049616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469463-470929:-1:exon

TPH_RS15040
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15040
old locus tag: Tph_c04560
so part of: sequence
location: complement(470907..471488)
location: region:470907-471488:-1
so has part: feature:470907-471488:-1:exon
subclass of: SO_0000010

position:470907:-1
position: 470907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471488:-1
position: 471488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470907-471488:-1:exon

TPH_RS15040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15040
old locus tag: Tph_c04560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013780317.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosome-binding GTPase
translation: MTARKENPALRGNAGLLRSDKKPANGKTKKLILVGSPNVGKSVIFNSLTGSYVTVSNYPGTTVEVTRGKGRFYQEVYEVVDTPGMYSLFPITEEERVTRTLLFREKPDVVVHVVDAKNLERMLPLTLQLLEAGLPVILTVNMMDEAEAMGRRIDLLRLSEILGIPVVGTAATSHHGLDLLKKAVVEYVRKRVA
SIO_010081: TPH_RS15040
subclass of: SO_0000673
so part of: TPH_RS15040
location: complement(470907..471488)
location: region:470907-471488:-1
so has part: feature:470907-471488:-1:exon

WP_236608812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:470907-471488:-1:exon

TPH_RS02335
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: tnpA
locus tag: TPH_RS02335
old locus tag: Tph_c04580
so part of: sequence
location: 473009..473410
location: region:473009-473410:1
so has part: feature:473009-473410:1:exon
subclass of: SO_0000010

position:473009:1
position: 473009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473410:1
position: 473410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473009-473410:1:exon

TPH_RS02335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: tnpA
locus tag: TPH_RS02335
old locus tag: Tph_c04580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015739658.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
translation: MNGKRWKRSATTVYNIGYHLIWCPKYRRKVLVSEVAERLKELLLQKARGIGVEIVQMEVMPDHVHLFVKTDPTNSPHFIVHQLKAYTSRVLRKEFPFLKSRLPSLWTRSYYCESVGHISEETIRKYIEDQKGK
SIO_010081: TPH_RS02335
subclass of: SO_0000673
so part of: TPH_RS02335
location: 473009..473410
location: region:473009-473410:1
so has part: feature:473009-473410:1:exon

WP_015049619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:473009-473410:1:exon

TPH_RS02340
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02340
old locus tag: Tph_c04590
so part of: sequence
location: 473416..474654
location: region:473416-474654:1
so has part: feature:473416-474654:1:exon
subclass of: SO_0000010

position:473416:1
position: 473416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474654:1
position: 474654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473416-474654:1:exon

TPH_RS02340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02340
old locus tag: Tph_c04590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015049596.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zinc ribbon domain-containing protein
translation: MTKAEQIKNTLQETRQRRETQKPAVYELKLQNLSKRKSEVLRKAFLEAKWLYNWLVSDTERLDTPANKVSAVEVKAGDSYEERELTVLGSQIKQEIADRLKDNLRVLGKLKKNGQKVGALKCKRFVNSIPLKQYGVTYSLNFARNRVRIQKLGKFRVLGLHQIPADAEIANAVLVRKPSGYYLHVTCYLPKDSRTSPNPVGKDIGIDFGVGSKLTLSNGIRMDFEVHETPRLKQLQRKLAGTQKGSRNRERIRFLLRKEYEKLNNRRKDAQNKALAFLKIYRKVVFQDDCVKGWSVLFGRQVYSSGIGGLKSRLRTSLETPVVVERTETTTGECFACGKRRNLSLSDRVIECECGWKCDRDVNAALVILRKGLGLGPEQAVGLDRPELKPPEREAAARILGSNPYIRVSFPR
SIO_010081: TPH_RS02340
subclass of: SO_0000673
so part of: TPH_RS02340
location: 473416..474654
location: region:473416-474654:1
so has part: feature:473416-474654:1:exon

WP_015049620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:473416-474654:1:exon

TPH_RS02345
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02345
old locus tag: Tph_c04600
so part of: sequence
location: 474679..475281
location: region:474679-475281:1
so has part: feature:474679-475281:1:exon
subclass of: SO_0000010

position:474679:1
position: 474679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475281:1
position: 475281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474679-475281:1:exon

TPH_RS02345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02345
old locus tag: Tph_c04600
inference: COORDINATES: protein motif:HMM:NF012245.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MGGGHGVPIKTMVFPVFGENEEVIGAYSIGLPRDNARKTQQIAKALNESTSQMVVATQQNAEAATEISAAAKKLSSGAEQTAKLISNIDDVAKSIKEIANEIRMIGLNAAIEAARAGEYGRGFAVVADEVRKLAVNSKDLADQVKTITVKVNETVLQFVDIAKKLGESTEEQAASCQEITANAEMISMRAAELAEISKKL
SIO_010081: TPH_RS02345
subclass of: SO_0000673
so part of: TPH_RS02345
location: 474679..475281
location: region:474679-475281:1
so has part: feature:474679-475281:1:exon

WP_148275821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474679-475281:1:exon

TPH_RS02350
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02350
old locus tag: Tph_c04620
so part of: sequence
location: 475841..475923
location: region:475841-475923:1
so has part: feature:475841-475923:1:exon
subclass of: SO_0000663

position:475841:1
position: 475841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475923:1
position: 475923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475841-475923:1:exon

TPH_RS02350
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1089553
locus tag: TPH_RS02350
old locus tag: Tph_c04620
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.9
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:475875..475877,aa:Leu,seq:tag)
SIO_010081: TPH_RS02350
subclass of: SO_0000673
so part of: TPH_RS02350
location: 475841..475923
location: region:475841-475923:1
so has part: feature:475841-475923:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:475841-475923:1:exon

TPH_RS02355
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: tig
locus tag: TPH_RS02355
old locus tag: Tph_c04630
so part of: sequence
location: 476036..477439
location: region:476036-477439:1
so has part: feature:476036-477439:1:exon
subclass of: SO_0000010

position:476036:1
position: 476036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477439:1
position: 477439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476036-477439:1:exon

TPH_RS02355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: tig
locus tag: TPH_RS02355
old locus tag: Tph_c04630
EC number: 5.2.1.8
inference: COORDINATES: protein motif:HMM:TIGR00115.1
GO component: GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO process: GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: trigger factor
translation: MRAALESIEKNQASIHVEVEEERVAEALEQAYRKIVKKTVVPGFRKGRVPRPILEARLGKEVLYQEALEILLEQAYREAVIETAIEPIDHPEIDVIQMEEGKPLIFNVKVEVLPEVKLGDNYKGVTAVIPEVKIGDDEVEAHLKLLQQRHARLVDAGDKAIDDGDVAVIDLETVVNGKVEQRLSGKDQIIEVGMAKFIPGFEGHLIDMKAGERKEFTLNLPSVFQYKDLEGKEAKFKVKVVAVKRKEYPDLDDEFARDVSEFSTLEELKEHLRKKLEETGQRQARRIFKERVVAKVVDDANVEIPEPLLKRQLNLEYSQFLQRLAMQRLNMDDYLRMVNKDKEALQRDLEERARRVVKTRLVLGAVAKAEGIKVTPEELAQEINDMAAQYNLDAEKLRADLEARDQIGAIEEDLLMEKVSDFLADNAVPLTEPENRQDETEAEVQDAQEGAAAEEEQGKDSGEGPSA
SIO_010081: TPH_RS02355
subclass of: SO_0000673
so part of: TPH_RS02355
location: 476036..477439
location: region:476036-477439:1
so has part: feature:476036-477439:1:exon

WP_015049623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476036-477439:1:exon

TPH_RS02360
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: clpP
locus tag: TPH_RS02360
old locus tag: Tph_c04640
so part of: sequence
location: 477569..478174
location: region:477569-478174:1
so has part: feature:477569-478174:1:exon
subclass of: SO_0000010

position:477569:1
position: 477569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478174:1
position: 478174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477569-478174:1:exon

TPH_RS02360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: clpP
locus tag: TPH_RS02360
old locus tag: Tph_c04640
EC number: 3.4.21.92
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002262672.1
GO component: GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO function: GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent Clp endopeptidase proteolytic subunit ClpP
translation: MNRAQYLVPIVVEQTSRGERSYDIYSRLLKDRIIFLGTPIDDSVANIIIAQMLFLEAEDPEKDIYLYINSPGGSITAGLAIFDTMRYVKPDVSTICVGMAASMGAFLLAAGAKKKRFATPNSEIMIHQPMGGAQGQATDVEIHARRIVKVRDRLNRILAELTGQSVERISRDTDRDTFMDAEEAKEYGIIDEVITSRVDKV
SIO_010081: TPH_RS02360
subclass of: SO_0000673
so part of: TPH_RS02360
location: 477569..478174
location: region:477569-478174:1
so has part: feature:477569-478174:1:exon

WP_015049624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477569-478174:1:exon

TPH_RS02365
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: clpX
locus tag: TPH_RS02365
old locus tag: Tph_c04650
so part of: sequence
location: 478201..479460
location: region:478201-479460:1
so has part: feature:478201-479460:1:exon
subclass of: SO_0000010

position:478201:1
position: 478201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479460:1
position: 479460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478201-479460:1:exon

TPH_RS02365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: clpX
locus tag: TPH_RS02365
old locus tag: Tph_c04650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011392066.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent Clp protease ATP-binding subunit ClpX
translation: MYKFGDEKGQLKCSFCGKLQDQVKKLVAGPGVYICDECIELCNEIIEEELGDEADFELSDIPKPKEIKEILDQYVIGQENAKKILSVAVYNHYKRINMGMKSDDVELQKSNIIMLGPTGCGKTLLAQTLAKILNVPFAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFIQIDTTNILFICGGAFEGIDKIIQNRIGKKTIGFGAELSRQEKDIGKILSQILPVDLLKYGLIPEFVGRVPIIVTLDALDEEALVRILTEPKNALVRQYQKLFEIDGVTLEFKEDALRAVAKEAIRRNTGARGLRAILEDIMLNVMYEVPSRHDIIKCVITKDVIAKKEEPILVTEDRSKKKKEETA
SIO_010081: TPH_RS02365
subclass of: SO_0000673
so part of: TPH_RS02365
location: 478201..479460
location: region:478201-479460:1
so has part: feature:478201-479460:1:exon

WP_015049625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:478201-479460:1:exon

TPH_RS02370
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: lonB
locus tag: TPH_RS02370
old locus tag: Tph_c04660
so part of: sequence
location: 479770..481434
location: region:479770-481434:1
so has part: feature:479770-481434:1:exon
subclass of: SO_0000010

position:479770:1
position: 479770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481434:1
position: 481434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479770-481434:1:exon

TPH_RS02370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: lonB
locus tag: TPH_RS02370
old locus tag: Tph_c04660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011392067.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0030436 - asexual sporulation [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent protease LonB
translation: MAGEFPGLSGFNGLIGIVQIVFVIIIGLYFWNLLRNQQGTRLAVDKESKKELEKIQRLRRISLAEPLSEKTRPRRFEEIVGQEEGLKALRAALCGPNPQHVLIYGPPGVGKTAAARLVLEEAKRNPDSPFGMSAGFVELDATIARFDERGIADPLIGSVHDPIYQGAGPLGMAGIPQPKPGAVTKAHGGILFIDEIGELHPIQLNKLLKVLEDRKVFFESAYYNSEDTHIPAHIHDIFQNGLPADFRLIGATTRLPEEISPAIRSRCVEVFFRALLPEEIGKIAGNAAARIGFSFGAGALEVVARYAINGRDAVNIVQIAAGIAHSRGERVILAADVEWVVSSGQYSPRPESKIPLQPAVGRVNGLAVVGPNMGTLLEIEVAVGPPLDGRGEITVTGIVEEEELGGLAGRRVRRKSMIRSSVENALTVLRRFLDVDPRRCDIHINFPGTVPTDGPSAGVAIAVGIYSALTGRAVSNQVALTGELSLHGEVKPVGGIIAKVEAARRAGAKKVLIPQENWQEIFKEMPLEVIPIAQLKDALRLALLPGDCSRQASA
SIO_010081: TPH_RS02370
subclass of: SO_0000673
so part of: TPH_RS02370
location: 479770..481434
location: region:479770-481434:1
so has part: feature:479770-481434:1:exon

WP_015049626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:479770-481434:1:exon

TPH_RS02375
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: lon
locus tag: TPH_RS02375
old locus tag: Tph_c04670
so part of: sequence
location: 481573..483978
location: region:481573-483978:1
so has part: feature:481573-483978:1:exon
subclass of: SO_0000010

position:481573:1
position: 481573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483978:1
position: 483978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481573-483978:1:exon

TPH_RS02375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: lon
locus tag: TPH_RS02375
old locus tag: Tph_c04670
EC number: 3.4.21.53
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003868370.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endopeptidase La
translation: MSQEQDQRFEERTQERCSREEGRILPLLPLRGLLVFPYMVIHLDVGREKSVSAIDEAMLHDREIFLVTQKEAQTDEPQRDDIYQVGTIAEIKQLLKLPGGTFRVLVEGLRRGRIKEYLAQEPFIKVMVEEFEDSCEITPEIEALMRSVIGQFEEYVKTGKKIPPETAVSIVSIDEPGRLADIIAAHINLHVGDKQAILEAFDPKERLERLAEILSREMEILELERKINMRVRKQMERTQKEYYLREQMRAIQKELGEKDERTAEVEELRERIAEANFPKEVEEKALKEVERLEKMPPMVAEAVVVRNYIDWLLALPWSKETRDRLNLGKAEEILEADHYGLQKPKERILEYLAIRKLATKMRGPILCFVGPPGVGKTSLARSIARALGRKFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQGMRQAGTKNPVFLLDEVDKLSSDFRGDPSSALLEVLDAEQNHAFSDHYIEVPFDLSKVMFITTANVEYNIPRPLLDRMEVIHLSGYTEEEKVRIAERHLIPKQVKEHGLKSHHLQISENALRRIIREYTREAGVRNLEREIAAICRKTAREVVKDKNYQVKVTAANVEAFLGIPRYRYGAIEKKSEVGVAVGLAWTEVGGEVLNVEVSILKGKGNIMLTGKLGDVMKESAQAAFSYVRSRSSELGITGEFHEKCDIHIHIPEGAIPKDGPSAGITMATALASALSGRPTRHDVAMTGEITLRGRVLPVGGIKEKVLAAHRAGIKTVILPAENKKDLEEIPANVKRKLKFVLVENMDQVLSEALLPAQDHREVLSGGVGA
SIO_010081: TPH_RS02375
subclass of: SO_0000673
so part of: TPH_RS02375
location: 481573..483978
location: region:481573-483978:1
so has part: feature:481573-483978:1:exon

WP_015049627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:481573-483978:1:exon

TPH_RS02380
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02380
old locus tag: Tph_c04680
so part of: sequence
location: 484002..484415
location: region:484002-484415:1
so has part: feature:484002-484415:1:exon
subclass of: SO_0000010

position:484002:1
position: 484002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484415:1
position: 484415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484002-484415:1:exon

TPH_RS02380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02380
old locus tag: Tph_c04680
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVGRKRRGSASLLLGMGTSFLLVMGGVGAAVFYVIASGGADFYLSRYFTWLLFVSVTCGGMVAGYSGGVGCWVPAGSIGLLWGGLTALLLTAAAPSGPGIPALLALLVLPALVSGTGALLAANRRVKKRREAPPEAG
SIO_010081: TPH_RS02380
subclass of: SO_0000673
so part of: TPH_RS02380
location: 484002..484415
location: region:484002-484415:1
so has part: feature:484002-484415:1:exon

WP_015049628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:484002-484415:1:exon

TPH_RS02385
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02385
old locus tag: Tph_c04690
so part of: sequence
location: 484548..485381
location: region:484548-485381:1
so has part: feature:484548-485381:1:exon
subclass of: SO_0000010

position:484548:1
position: 484548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485381:1
position: 485381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484548-485381:1:exon

TPH_RS02385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02385
old locus tag: Tph_c04690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015739875.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbon-nitrogen hydrolase family protein
translation: MGVVRVGLIQMLVEESKEKNLSRAEEMVREAAGRGAGLVVLPEMFNCPYSNEFFPPYAEQEGGYTWQRLSRMAGERRVFLVGGSVPERGEDGRIYNTSYIFDDRGRQIGKHRKVHLFDIDVEGQYFRESEILAPGSRATVFATPYGRMGVMICYDLRFPELARLLVQKGALVLVVPAAFNMTTGPAHWELLFRCRALDNQVFALGVAPARDEKASYVSYANSLIADPWGRVVVRLGEEEGILVEDLDLGEVEKIRAALPLLKHIRRDLYEVREKLQD
SIO_010081: TPH_RS02385
subclass of: SO_0000673
so part of: TPH_RS02385
location: 484548..485381
location: region:484548-485381:1
so has part: feature:484548-485381:1:exon

WP_015049629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:484548-485381:1:exon

TPH_RS02390
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02390
old locus tag: Tph_c04700
so part of: sequence
location: complement(485398..486513)
location: region:485398-486513:-1
so has part: feature:485398-486513:-1:exon
subclass of: SO_0000010

position:485398:-1
position: 485398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486513:-1
position: 486513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485398-486513:-1:exon

TPH_RS02390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02390
old locus tag: Tph_c04700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003729641.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminopeptidase
translation: MTNPRVSRLAENLVHYSCRLQPGEKILIEAVGLELPLVRELIRQVYRAGGIPFVTIKDRAVDRALLLGATLEQIRLMARYEAARMRDMDAYIGIRSGDNAAELSDVPPDKMELYQKYFWQPVHGEIRVPRTKWVVLRYPSPSMAQAAGMSTEAFEDFYFSVCNLDYARMSRAMDPLVELMNRTDRVRITGPGTDLSFSIKGLPAVKCDGKANIPDGEVYTAPVRDSVNGWITYNTPSQYQGFTYENIRLEFRHGRIIRATANATERINRIFETDEGARYVGEFSFGLNPHITRPIRDTLFDEKIAGSIHLTPGSAYDDCFNGNRSAVHWDLVLIQTPEYGGGEIYFDGVLVRKDGRFVLPELEGLNPENLV
SIO_010081: TPH_RS02390
subclass of: SO_0000673
so part of: TPH_RS02390
location: complement(485398..486513)
location: region:485398-486513:-1
so has part: feature:485398-486513:-1:exon

WP_028991139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485398-486513:-1:exon

TPH_RS02395
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02395
old locus tag: Tph_c04710
so part of: sequence
location: 486948..487496
location: region:486948-487496:1
so has part: feature:486948-487496:1:exon
subclass of: SO_0000010

position:486948:1
position: 486948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487496:1
position: 487496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486948-487496:1:exon

TPH_RS02395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02395
old locus tag: Tph_c04710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011916180.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flavodoxin family protein
translation: MKVVGIVGSPRRGSNTEILVEQVLAGAAAAGAETQIFRLNDLNIRGCQACNYCKEHDGCRQKDDMTQIYDALFAADGIVIGSPIYMGYFTAQTKLFMDRLFAFFRPGVGSSLPKGKKGVVVYCQGGGDDRKFVEALARRLAGVMGLELKGVVGGNGMNELGVVRENKELMDRAFRLGEELVS
SIO_010081: TPH_RS02395
subclass of: SO_0000673
so part of: TPH_RS02395
location: 486948..487496
location: region:486948-487496:1
so has part: feature:486948-487496:1:exon

WP_015049631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:486948-487496:1:exon

TPH_RS15885
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15885
old locus tag: Tph_c04720
so part of: sequence
location: 487493..487669
location: region:487493-487669:1
so has part: feature:487493-487669:1:exon
subclass of: SO_0000010

position:487493:1
position: 487493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487669:1
position: 487669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487493-487669:1:exon

TPH_RS15885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15885
old locus tag: Tph_c04720
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKANGKRGHKFVRYADDRNIYVKSRRAGHRVMESMKKFAVVWGGRGLAAPSYSIYFIF
SIO_010081: TPH_RS15885
subclass of: SO_0000673
so part of: TPH_RS15885
location: 487493..487669
location: region:487493-487669:1
so has part: feature:487493-487669:1:exon

WP_015049632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487493-487669:1:exon

TPH_RS02405
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02405
old locus tag: Tph_c04730
so part of: sequence
location: complement(487659..488945)
location: region:487659-488945:-1
so has part: feature:487659-488945:-1:exon
subclass of: SO_0000010

position:487659:-1
position: 487659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488945:-1
position: 488945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487659-488945:-1:exon

TPH_RS02405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02405
old locus tag: Tph_c04730
inference: COORDINATES: protein motif:HMM:NF019310.2
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MNSNSNAVKTAGAYRWLIWSVMALSYIVVFFHRMAAGVVRDDLMEAFHISATTFANLGATYFYAYMIMQIPVGVLADTWGARKTVTAGTVLAGIGSILFGLAPGVLLAFLGRLLVGIGVSVVFVCILKIISVWFRPEEFSTMSGITSFTGNLGGVLAQTPLALMVAAFTWRNTFMAIGLATLLIALLCYLIIRDYPAEAGPAAAGGKNKAQAEKLTAASFIQVLTNRHTWPGFFLFAGFFGSYVSFTGTWGVTYLMSVYGMSKNAAANYALVATIGLMVGSVLIGVISDRIQSRKKPMLLFGFIYLATWALLVFVNGGKPPEGILYPLLFMMGFCCATFILSFAVAKEVNPPQIAGVSTAAVNTGGFLGAALLPAIMGMYLDRAEGLAATALYHNTFMYGFIAVVIGTLCILLIKETGCKNIWQSLRK
SIO_010081: TPH_RS02405
subclass of: SO_0000673
so part of: TPH_RS02405
location: complement(487659..488945)
location: region:487659-488945:-1
so has part: feature:487659-488945:-1:exon

WP_015049633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487659-488945:-1:exon

TPH_RS02410
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02410
old locus tag: Tph_c04740
so part of: sequence
location: 489181..489951
location: region:489181-489951:1
so has part: feature:489181-489951:1:exon
subclass of: SO_0000010

position:489181:1
position: 489181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489951:1
position: 489951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489181-489951:1:exon

TPH_RS02410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02410
old locus tag: Tph_c04740
inference: COORDINATES: protein motif:HMM:NF013757.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IclR family transcriptional regulator
translation: MGKPKYPVSAIERALEILMLLFREKREMGITEIAAAMGLHKSTVHRALTTLQEYGFVEQNPVTSKYWLGIRLFSLGMLYREKMRIQDLARPFTEELARKCREVVHMGILENQHEVGRVLVIDKVETEQILSLTPRIGSGTPAHCSAMGKMLLAYQSDEYLEKFAAQGLPRYTKNTITDLEELKQELRKIKEQGYALDREEIEVGLTCVAAPILDGHGKAIAAVSVSGPVTRITPERLPLIINDVKETAARISEQIR
SIO_010081: TPH_RS02410
subclass of: SO_0000673
so part of: TPH_RS02410
location: 489181..489951
location: region:489181-489951:1
so has part: feature:489181-489951:1:exon

WP_015049634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489181-489951:1:exon

TPH_RS02415
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02415
old locus tag: Tph_c04750
so part of: sequence
location: 490646..491725
location: region:490646-491725:1
so has part: feature:490646-491725:1:exon
subclass of: SO_0000010

position:490646:1
position: 490646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491725:1
position: 491725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490646-491725:1:exon

TPH_RS02415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02415
old locus tag: Tph_c04750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003867444.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Glu/Leu/Phe/Val dehydrogenase
translation: MGVFDMMEKYGHEQVIFNYDKRTGLKAIIAIHDTTLGPANGGCRMWDYKSEEEALEDALRLSYGMTYKSAAAGIMFGGGKTVIIGDPTRKTPEMFYALGRFVDTLHGRYYTGTDVGTTPQDFVEASKIARRFTGLPVEFGGCGNSGMITAYGVFQGMRACLREYYGEESFKGRKVSVQGVGKAGEPLIKYLQDAGAEIVAITDIDENKLYAVAKKYGVEAVDPEEIYEVECDIFSPNALGGVINDNTVEKLNCKIVAGAANNVLAESRHGARLKERNILYAPDFIINAGGIIAVADEFELGGFKLERALKKAEQIYERLLKVFAYAKEKDIPTQDAAEYLTEQLIESLAAIKRRWVNPE
SIO_010081: TPH_RS02415
subclass of: SO_0000673
so part of: TPH_RS02415
location: 490646..491725
location: region:490646-491725:1
so has part: feature:490646-491725:1:exon

WP_015049635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:490646-491725:1:exon

TPH_RS02420
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02420
old locus tag: Tph_c04760
pseudo: true
so part of: sequence
location: 492770..494122
location: region:492770-494122:1
so has part: feature:492770-494122:1:exon
subclass of: SO_0000010

position:492770:1
position: 492770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494122:1
position: 494122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492770-494122:1:exon

TPH_RS02420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02420
old locus tag: Tph_c04760
inference: COORDINATES: protein motif:HMM:NF012686.2
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: sodium:solute symporter family protein
SIO_010081: TPH_RS02420
subclass of: SO_0000673
so part of: TPH_RS02420
location: 492770..494122
location: region:492770-494122:1
so has part: feature:492770-494122:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:492770-494122:1:exon

TPH_RS02425
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02425
old locus tag: Tph_c04770
so part of: sequence
location: 494143..496089
location: region:494143-496089:1
so has part: feature:494143-496089:1:exon
subclass of: SO_0000010

position:494143:1
position: 494143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496089:1
position: 496089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494143-496089:1:exon

TPH_RS02425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02425
old locus tag: Tph_c04770
inference: COORDINATES: protein motif:HMM:NF013086.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MYNIEWPYPVEWGKENRIKADVLVIGGGIAGCMAAIAAARKRLKVVLVEKGASKRSGSAGSGCDHWENAATNPCCKITPEELTAAMIDDNDGYNNGISHYIECREGYDRLLDLEKMGAKIRDTDDEFKGAEFRDEKTKLLFAYDYENRYTLRVWGTTFKPAMYKEMRRLGVQVFDRIMATSLLTENGKQGSRVIGATGINTRTGKFLVFQAKATVICTSRPARVWLFSAGLPGLCEFRPPQCIGDGHAMGWRAGVEFTMMEKSVRAEFSAAGRSYPPYGAGNNHNTWYAATLVDAEGREIPYVDRDGNILTSVSQRYHPARGQKFFLMGGAIDNPKYEYRGPEILRWEELLKQGYKLPFFADLGSMPEMERKAIWGLMVGQEGKTQVPIYGLYTEAGFDPKLDMLQCYGTGWTSAQFLPQERQLFGLPGGILNDWELKTNLEGLYAAGDALFASDCVGHAAATGYYAGRHAANYAMKVEELPICEQQVEIEKQRVYAPLKNSDQNGIGWKELNMGIAKTMQNYCGGVKREELLNIGLKTLKDYEQNVIPMLYARNPHELVRTLEVVNILTVAQIIIHASLARKSSSRALCFERADYPEMDPPRDRKFITVKQVNNEVIIGELPLDYYGSLAENYEKYNKDYIRGENYE
SIO_010081: TPH_RS02425
subclass of: SO_0000673
so part of: TPH_RS02425
location: 494143..496089
location: region:494143-496089:1
so has part: feature:494143-496089:1:exon

WP_015049637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494143-496089:1:exon

TPH_RS14610
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS14610
so part of: sequence
location: 496082..496354
location: region:496082-496354:1
so has part: feature:496082-496354:1:exon
subclass of: SO_0000010

position:496082:1
position: 496082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496354:1
position: 496354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496082-496354:1:exon

TPH_RS14610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS14610
inference: COORDINATES: protein motif:HMM:NF024585.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferredoxin family protein
translation: MNDKVYVTPETPAANPIVFDPELCTGCNRCVDICQVDLFIPNPEKGKPPIALYVGECWYCGCCVMECPKPGAIKLRHPLMNQVHWERRKK
SIO_010081: TPH_RS14610
subclass of: SO_0000673
so part of: TPH_RS14610
location: 496082..496354
location: region:496082-496354:1
so has part: feature:496082-496354:1:exon

WP_081578574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:496082-496354:1:exon

TPH_RS02430
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: buk
locus tag: TPH_RS02430
old locus tag: Tph_c04780
so part of: sequence
location: 496790..497890
location: region:496790-497890:1
so has part: feature:496790-497890:1:exon
subclass of: SO_0000010

position:496790:1
position: 496790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497890:1
position: 497890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496790-497890:1:exon

TPH_RS02430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: buk
locus tag: TPH_RS02430
old locus tag: Tph_c04780
EC number: 2.7.2.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009610633.1
GO function: GO:0047761 - butyrate kinase activity [Evidence IEA]
GO process: GO:0006113 - fermentation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: butyrate kinase
translation: MSEKRTFRQLVINPGSTSTKFAVFDNERCIFEKKVEHDAAELKQFTRVADQKDYRTGVVLKALEEAGIPLSSFDAVVGRGGILGPMESGTYLVNETMKEELQNCPREEHASNLGGLIADEIAGRNGIPAYIVDPVCTDEMSDVARITGLPDLEKFSFCHALNMKAVARKVAQKMGRRLEECNFVVAHLGSGISIAPFRRGRIVDVNGATQEGPFSPERCGGLPAMQLMKLCYSGKYSYEQMQEMLMKSGGMYAYLGTKDVREAEERAAAGDEKAQLVLEAMAYQIAKEIGAMAVVLEGDLDRIIITGGIARSEFITGRVIRMVGFLAPVEVVPGEEELESLALGGLRVLRGEEKPKVYRGTRRLEE
SIO_010081: TPH_RS02430
subclass of: SO_0000673
so part of: TPH_RS02430
location: 496790..497890
location: region:496790-497890:1
so has part: feature:496790-497890:1:exon

WP_015049638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:496790-497890:1:exon

TPH_RS02435
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02435
old locus tag: Tph_c04790
so part of: sequence
location: 497887..498819
location: region:497887-498819:1
so has part: feature:497887-498819:1:exon
subclass of: SO_0000010

position:497887:1
position: 497887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498819:1
position: 498819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497887-498819:1:exon

TPH_RS02435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02435
old locus tag: Tph_c04790
inference: COORDINATES: protein motif:HMM:NF006045.0
GO function: GO:0016746 - acyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional enoyl-CoA hydratase/phosphate acetyltransferase
translation: MSYTTFREMAEEARSLGSTRLSVAAADDRDVLQAVKMGVEAGLVTPVLVGDERKIRDIAAAIGLSLEGTEIVHRPDPQLAALEAVKVISDGGADILLKGMVNSSDFMRAVLHPDCGLRTGRILSHLAVFEVPGFDRLLFNTDGGVNINPDLNQKIEILKNAVEFMHALGWEKPRVAVITANEAINPKMESTLDAAILTKMAESGQIRGAVVDGPLALDVAISPEAAEHKGIKSPVAGRADLLLTPTIEVGNVFGKSLIYLAKAVMAGVVLGARVPVVLTSRASRPEEKLYSLAMASLAQLRTARRAMKCG
SIO_010081: TPH_RS02435
subclass of: SO_0000673
so part of: TPH_RS02435
location: 497887..498819
location: region:497887-498819:1
so has part: feature:497887-498819:1:exon

WP_015049639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:497887-498819:1:exon

TPH_RS02440
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02440
old locus tag: Tph_c04800
so part of: sequence
location: 498904..500673
location: region:498904-500673:1
so has part: feature:498904-500673:1:exon
subclass of: SO_0000010

position:498904:1
position: 498904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500673:1
position: 500673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498904-500673:1:exon

TPH_RS02440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02440
old locus tag: Tph_c04800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015051431.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine pyrophosphate-dependent enzyme
translation: MKTKAVLTGNEAVARGAWEAGVGLGVGYPGTPSTEILENLALYKGPEVVWAVNEKVALEEAYGASIGGLRTLVTMKHVGLNVAADPLFTAAYMGVNGGMVIAVADDPGMHSSQNEQDNRWYALHAKVPMLEPSDSQECLLYTRLAFELSERYDVPVLLRLVTRTSHARGVVELSADTEYERVRYEYVRDPKKYMSLPANCRLRKQILEKNLAAVVSDEAVKTLDVMDITGTDVGIITAGASYNYVREVFGDRYSVLKLGLVYPLNEGIIREFAGKVKEIYVVEELDPYLEMSIKALGIRCEGKKYITSFFELNPQIIADSLAEAGLVVPEREAAVDEPLEVPARPPLLCAGCPHRGFFYAARREKVMLTGDIGCYALGGVPPLEAIDASICMGGGYTLALGLSLIAPEGEKVFGCMGDSTFYHSGITGAIEAVYNNRSIIPVVLDNRITAMTGHQENPGTGRLLKGEAAYEQQPEKLLQAVGYDRVLVVHAYELESLRKAIREAKEAADRVAIVVKTPCRLLKGVKPGVPYKVDAGVCRKCKACLKLGCPAISLNPEGVPAIDPITCFGCGLCAQVCRNKAIDEVEEEE
SIO_010081: TPH_RS02440
subclass of: SO_0000673
so part of: TPH_RS02440
location: 498904..500673
location: region:498904-500673:1
so has part: feature:498904-500673:1:exon

WP_015049640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:498904-500673:1:exon

TPH_RS02445
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02445
old locus tag: Tph_c04810
so part of: sequence
location: 500673..501257
location: region:500673-501257:1
so has part: feature:500673-501257:1:exon
subclass of: SO_0000010

position:501257:1
position: 501257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500673-501257:1:exon

TPH_RS02445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02445
old locus tag: Tph_c04810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015051430.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: indolepyruvate oxidoreductase subunit beta
translation: MPRETKTIMLTGVGGQGIILASTILINGLLKANYDVKGSEVHGMAQRGGSVVTQLRYGDKVYSPLVGAGAVDLLFAMEKLEAARYAHMLKKNGILLMNEMEIPSAPIMTGKVPYPRDIEERLAALPISFHSIPADEKARELGNPRVVNVIMLGAMIKLCGLDRELDWKEVVAAVVKPRFRELNLKAFEVGMKLV
SIO_010081: TPH_RS02445
subclass of: SO_0000673
so part of: TPH_RS02445
location: 500673..501257
location: region:500673-501257:1
so has part: feature:500673-501257:1:exon

WP_015049641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:500673-501257:1:exon

TPH_RS02450
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02450
old locus tag: Tph_c04820
so part of: sequence
location: complement(501570..502397)
location: region:501570-502397:-1
so has part: feature:501570-502397:-1:exon
subclass of: SO_0000010

position:501570:-1
position: 501570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502397:-1
position: 502397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501570-502397:-1:exon

TPH_RS02450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02450
old locus tag: Tph_c04820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013756800.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA adenine methylase
translation: MALTNQKVKPRPPVKWAGGKGQLLTQLIPLFPKRFCVYHEPFVGGGAVFFHLLPAQASLIDSNEELINFYLVVRDNLEELLKDLRRHVNERSYYYRIRALDPAKMDPVRRASRFLFLNKTAYNGLWRVNRKGQHNVPFGNYKNPTIIDEPNLRLVSSSLKNAEIILGDFALVLDRAESGDFVYFDPPYHPLSETSCFTGYTAAAFGEEEQKRLAAVFRELDRRGCLVMLSNSDTPFIKELYAGYDICAVQARRAINCRPDRRGPINEVVIRNYRC
SIO_010081: TPH_RS02450
subclass of: SO_0000673
so part of: TPH_RS02450
location: complement(501570..502397)
location: region:501570-502397:-1
so has part: feature:501570-502397:-1:exon

WP_015049642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:501570-502397:-1:exon

TPH_RS02455
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02455
old locus tag: Tph_c04830
so part of: sequence
location: 502811..503650
location: region:502811-503650:1
so has part: feature:502811-503650:1:exon
subclass of: SO_0000010

position:502811:1
position: 502811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503650:1
position: 503650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502811-503650:1:exon

TPH_RS02455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02455
old locus tag: Tph_c04830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013430489.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphate ABC transporter substrate-binding protein
translation: MKAAKFRLLGVVMAALLVLGMLAGCSRAEKAPQGTSGLSGTIVIAGSTSVQPLSEELAAAFKEKHPDVDISVAGGGSSAGIKAAQEGTADIGASSRELKPGEKGTLFETLIAKDGIAVVVHPGNAVNALSLDQVRKIFAGEITNWKDVGGSDAAINVYTREEGSGTRGAFEEIVMGEDMKISNKAGVQNSTGAVRTAVAGDPNGIGYISLGSVNKAVKALKIDGVEPSKETVLNGSYRIARPFLYLTKGKPTGLVKAYIDFVLSPEGQKIVEQDFIPVK
SIO_010081: TPH_RS02455
subclass of: SO_0000673
so part of: TPH_RS02455
location: 502811..503650
location: region:502811-503650:1
so has part: feature:502811-503650:1:exon

WP_015049643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:502811-503650:1:exon

TPH_RS02460
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02460
old locus tag: Tph_c04840
so part of: sequence
location: 503927..504619
location: region:503927-504619:1
so has part: feature:503927-504619:1:exon
subclass of: SO_0000010

position:503927:1
position: 503927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504619:1
position: 504619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503927-504619:1:exon

TPH_RS02460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02460
old locus tag: Tph_c04840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003229442.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MPPRILVVDDEDVIVKLVSYNLKKEGFEVITAGDGQEAWEKIRQEKPDLVILDVMLPGMDGFSLCRLLRQEKMMTPVLMLTAKDEEIDRVLGLEIGADDYLTKPFSPRELIARVRAILRRTGERRTGQEEQLEFGELVVYPARYEVRRGGEQIELTPREFELLLLLLRNAGLVMSREYILQKLWGDDFYGDDRVVDVHIRHLREKIEREPGNPVYIKTVRGVGYKFQPPE
SIO_010081: TPH_RS02460
subclass of: SO_0000673
so part of: TPH_RS02460
location: 503927..504619
location: region:503927-504619:1
so has part: feature:503927-504619:1:exon

WP_015049644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:503927-504619:1:exon

TPH_RS02465
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02465
old locus tag: Tph_c04850
so part of: sequence
location: 504628..506058
location: region:504628-506058:1
so has part: feature:504628-506058:1:exon
subclass of: SO_0000010

position:504628:1
position: 504628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506058:1
position: 506058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504628-506058:1:exon

TPH_RS02465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02465
old locus tag: Tph_c04850
inference: COORDINATES: protein motif:HMM:TIGR00229.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MGIKLALGFLLILGCALLAFGLAALRYLPARGREVIVAQEWWPFLAAASLVFVVSIAAVLVLVRGITHPLGELADVARRLSQGNWGSRVKHPAADELGDLACSLNNLSARIRKTVGDLEESRGQLEAVLAHMGSGVLLVDGGGCIVMVNPVAEEILGIRQEEVRGRSQVEVVRNYSLSQLISEVLGEWRPQRREISIIYPEERILEVTAAPVCGEGRERRGVLVVLYDITEIRRLERVRAEFVANISHELKTPVTSIKGFAETLLEGALYNHRAAEEFVSIINEEAERLSRLIQDLLELSKIESREVKPQPENLDLTAEIKEIVDRLQPRFRKKGLELNTGLPPEAVYVRADSDHLEQILSNLLDNALKYTPEGGRVAVGLLPGEIEVIVVVEDNGIGIPAEDLPRIFERFYRVDKARSRKLGGTGLGLAIVKHLVSANGGRVWVESEPGRGSKFYFSLPAVEEVEETGNYGRDKI
SIO_010081: TPH_RS02465
subclass of: SO_0000673
so part of: TPH_RS02465
location: 504628..506058
location: region:504628-506058:1
so has part: feature:504628-506058:1:exon

WP_158502653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:504628-506058:1:exon

TPH_RS02470
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: pstB
locus tag: TPH_RS02470
old locus tag: Tph_c04860
so part of: sequence
location: 506039..506797
location: region:506039-506797:1
so has part: feature:506039-506797:1:exon
subclass of: SO_0000010

position:506039:1
position: 506039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506797:1
position: 506797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506039-506797:1:exon

TPH_RS02470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: pstB
locus tag: TPH_RS02470
old locus tag: Tph_c04860
EC number: 7.3.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011345003.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphate ABC transporter ATP-binding protein PstB
translation: MEEIKFKISNLNLYYGTNRVLKDINLEIVAHQVTALIGPSGCGKSSLLRSLNRMNDLIPGARIEGSVLLDGEDIYRPGLDVADLRKRVGMVFQRPNPFPKSIFENVAYGPRRHGIRNRRVLAEIVEKSLREAALWDEVKDSLHKPALQLSGGQQQRLCIARALAVEPEVLLMDEPCSALDPISTARVEDLIDELKRDYTIVIVTHNMQQAARVSQYTAFLWDGTLVEFGETGRLFTNPVRKETEDYITGRYG
SIO_010081: TPH_RS02470
subclass of: SO_0000673
so part of: TPH_RS02470
location: 506039..506797
location: region:506039-506797:1
so has part: feature:506039-506797:1:exon

WP_015049646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:506039-506797:1:exon

TPH_RS02475
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: phoU
locus tag: TPH_RS02475
old locus tag: Tph_c04870
so part of: sequence
location: 506820..507476
location: region:506820-507476:1
so has part: feature:506820-507476:1:exon
subclass of: SO_0000010

position:506820:1
position: 506820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507476:1
position: 507476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506820-507476:1:exon

TPH_RS02475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: phoU
locus tag: TPH_RS02475
old locus tag: Tph_c04870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013298211.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0051049 - regulation of transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphate signaling complex protein PhoU
translation: MVRKSYREQLADLKENVLIMGTMVEEAIYKAVKSLKERDEELAQKVIDGDDAIDGYLVQIEDSCVRLLALQQPMARDLRVISTAIKIITDLERMADLAVDIARVTLRLSGQQLIKPLIDIPRMMEIAQRMTRISLDAYVQEDPEQVLCLRDYDHEVDALYNQVFRELLTFMIEDPRTITQATQLLFVARFLERIADHATNVGESVYYMVKGERKELND
SIO_010081: TPH_RS02475
subclass of: SO_0000673
so part of: TPH_RS02475
location: 506820..507476
location: region:506820-507476:1
so has part: feature:506820-507476:1:exon

WP_015049647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:506820-507476:1:exon

TPH_RS02480
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: pstC
locus tag: TPH_RS02480
old locus tag: Tph_c04880
so part of: sequence
location: 507682..508572
location: region:507682-508572:1
so has part: feature:507682-508572:1:exon
subclass of: SO_0000010

position:507682:1
position: 507682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508572:1
position: 508572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507682-508572:1:exon

TPH_RS02480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: pstC
locus tag: TPH_RS02480
old locus tag: Tph_c04880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013411930.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphate ABC transporter permease subunit PstC
translation: MLVKKERFYPGLLLLCALTSIMVVVLVGLFVFLQGYPLLSKTGFFSFLLGRNWSPGQGDFGILPMVVGTFAVTLGALLVGVPLGVTTAIFLAEYAPAGIGIWTRRAVELLAGIPSVVYGLFGMTVIVPLVRQVAMNWFGAMLSPEMKTGYCIVAASLVLAVMILPTIVSISEDALRAVPGEYREGSYALGVPRWETIVHCLLPAARSGIIAAVVLGMGRAVGETMAVLMVAGNAPALPRSIFSPVRTLSGNIGLEMAYASGEHAQALFATGVVLFLLIMLLNSCVLLFAGKGVRTR
SIO_010081: TPH_RS02480
subclass of: SO_0000673
so part of: TPH_RS02480
location: 507682..508572
location: region:507682-508572:1
so has part: feature:507682-508572:1:exon

WP_015049648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507682-508572:1:exon

TPH_RS02485
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: pstA
locus tag: TPH_RS02485
old locus tag: Tph_c04890
so part of: sequence
location: 508569..509423
location: region:508569-509423:1
so has part: feature:508569-509423:1:exon
subclass of: SO_0000010

position:508569:1
position: 508569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509423:1
position: 509423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508569-509423:1:exon

TPH_RS02485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: pstA
locus tag: TPH_RS02485
old locus tag: Tph_c04890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015907661.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphate ABC transporter permease PstA
translation: MSGLKKTRERLAQALVWSAAVITVGLLLLIIIYIMMQGLGKLSIDFFLENPRRMGSAGGIYSPLIGTLYFIFVTMLLAVPVGVGAAVYLTEFTHEGPLVRVIRFFTDALAGIPSIVIGLFGFAFFVVMLQPLTGGWSILSGSLTAFCMILPTIVRVSEEALRAVPTSYREGSLALGAGKWDTVLHVVIPSALPGILTGVLLGVGRVIGETAPLLLTLGGSLLVPRSVFSPARTLSMHLYLVAMETGEFSVAFATGAVLVMVVLLLNLAGYCLLQRLMGRVGGNR
SIO_010081: TPH_RS02485
subclass of: SO_0000673
so part of: TPH_RS02485
location: 508569..509423
location: region:508569-509423:1
so has part: feature:508569-509423:1:exon

WP_015049649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:508569-509423:1:exon

TPH_RS02490
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02490
old locus tag: Tph_c04900
so part of: sequence
location: complement(509473..511278)
location: region:509473-511278:-1
so has part: feature:509473-511278:-1:exon
subclass of: SO_0000010

position:509473:-1
position: 509473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511278:-1
position: 511278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509473-511278:-1:exon

TPH_RS02490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02490
old locus tag: Tph_c04900
inference: COORDINATES: protein motif:HMM:NF015894.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FapA family protein
translation: MLRSGNQDSKLPKQNDTQADHDAVDLPCWLAIIGGIVVASHPEGGPYPILHPCKGLRLFINGQEKTEPVPVRTSDHVEIRGTTEIEKGSWHLQVSPDKMEAVLHIKPELVIKRIVKDMPPSRYLRPEFQEVKESSAPLTLKELAEELAQKGIKYGIDRTAFNLALTATEETSIVVARGKEPVPGTDADVEFFFENRAKVPVEKDLNSTVDFRDIFSYISVEAGTVLAKKRPAVKGTPGIAVSGEVIPPPEPRDIELFAGQGCVISDDGLEAIAINFGRPVAKRKENRVLISVLPILQHQGDVDISSGNISFNGDISISGQIKEKMRVKAGGNVAVKGIVSHSEVMAGGSIIVHNNIFSSTLIAGLYQVFPQQLVQVLKKIEKELQNLVGVTKTLAGKQPQEKLPVGSEILKNYQDLTSAITLLSEGVRQFPQLTAIEEFRLLVNSLTAIARSPLTATSPVFLEKTANALSNFFKDVNPPSQEEGNIIIHYAVSSTLMAANRIQVTGKGCYHCELHAGNSVRVDGIFRGGKILAGGNVYIGTLGARGTPTSVATTEGSITAGYVFEGSLIRLGKSSYKFERNEEKVVLTLDPTENRINKTYW
SIO_010081: TPH_RS02490
subclass of: SO_0000673
so part of: TPH_RS02490
location: complement(509473..511278)
location: region:509473-511278:-1
so has part: feature:509473-511278:-1:exon

WP_015049650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:509473-511278:-1:exon

TPH_RS02495
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02495
old locus tag: Tph_c04910
so part of: sequence
location: 511875..514535
location: region:511875-514535:1
so has part: feature:511875-514535:1:exon
subclass of: SO_0000010

position:511875:1
position: 511875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514535:1
position: 514535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511875-514535:1:exon

TPH_RS02495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02495
old locus tag: Tph_c04910
EC number: 6.1.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000072239.1
GO function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: valine--tRNA ligase
translation: MRDEQLIPKTYDPHRVEKKWYEFWLEKNFFHAEPEKGGKPFCIVIPPPNVTGSLHLGHALDNTMQDVLVRWRRMQGYNTLWLPGTDHAGIATQARVEEQLAKEGLSKYDLGREKFLERVWAWKEAYGGKIIEQLKRLGASCDWERERFTMDEGCSRAVREVFCRLYEKGLIYRGSYIINWCPRCRTTISDIEVEHTDEEAKLYYITYPGVDGGPGITVATTRPETMMGDTGVAVNPNDQRYRHLIGKKVILPLMNREIPVIADEIVDPSFGTGAVKVTPAHDPNDFEIGRRHGLPEIVAIGKDGILTAEAGRYAGMTREEARQRVVQDLAEEGLLLKVEDYTHAVGHCYRCGTTIEPLVSEQWFVRMKPLAEPAMEAVKQGRIRFVPERFTKIYLNWLENIRDWCISRQLWWGHRIPVWYCRECGATICAVNDPTECSQCGGTGLEQDPDVLDTWFSSALWPFSTMGWPEYTKDLEFYYPTTVLVTGRDIIFFWVARMIFMGLEFMDDVPFREVLIHGLVLDALGRKMSKSLRNGIDPLEVIEKYGADTLRFTLLTGNTPGNDLRFYWEKVEGARNFANKVWNASRFAMLNLKDFRPEEAGDLKNGEGLTLADRWILSRFNKTVSGVTANLEAYELGEAARLLYEFIWSEFCDWYIEVIKPRLYGKESEESRRTAQAVLHYVLINTLELLHPFMPFLTEEIWQHLPHQGESIVVAPWPEVQQNFDDAKSEAEMEFLMEVIRGIRNMRGEMNIHPGRSVRCVAIAVPEHGALLQSYRSYVENLANCDPLEVVGPGQSKPKQALSTVVRGTEIYLPLAGLVDLDKELARLEKEAKTIEGVLQRVQKKLSNEQFLAKAPPEVVEKEREREAELRRTKEALNRRLAALKS
SIO_010081: TPH_RS02495
subclass of: SO_0000673
so part of: TPH_RS02495
location: 511875..514535
location: region:511875-514535:1
so has part: feature:511875-514535:1:exon

WP_015049651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511875-514535:1:exon

misc_binding
type: Miscellaneous Binding Site
subclass of: SO_0000409
RO_0002162: 1089553
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00230
inference: COORDINATES: profile:INFERNAL:1.1.1
note: T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: tRNA
so part of: sequence
location: 514747..514972
location: region:514747-514972:1
so has part: feature:514747-514972:1:region

position:514747:1
position: 514747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514972:1
position: 514972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514747-514972:1:region

TPH_RS02500
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: cysE
locus tag: TPH_RS02500
old locus tag: Tph_c04920
so part of: sequence
location: 515018..515713
location: region:515018-515713:1
so has part: feature:515018-515713:1:exon
subclass of: SO_0000010

position:515018:1
position: 515018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515713:1
position: 515713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515018-515713:1:exon

TPH_RS02500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: cysE
locus tag: TPH_RS02500
old locus tag: Tph_c04920
EC number: 2.3.1.30
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015738433.1
GO function: GO:0009001 - serine O-acetyltransferase activity [Evidence IEA]
GO process: GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine O-acetyltransferase
translation: MELFRRIKRDIQVVFERDPAARSILEVILCYPGFHAILLHRIAHWFYKRGLVLLPRLISQLNRALTGIEIHPGAKIGEGLFIDHGMGVVIGETAEIGDNVTIYQGVTLGGTGKEKGKRHPTVGNNVVISAGAKVLGSLVIGNNVKIGAGSVVLKDVPDNCTVVGVPGKIVKRDGRRIREAGEEGIDLRHNQLPDPIGEMLLSLQRRVLQLEGRIAELEAECSGSNGVQHIV
SIO_010081: TPH_RS02500
subclass of: SO_0000673
so part of: TPH_RS02500
location: 515018..515713
location: region:515018-515713:1
so has part: feature:515018-515713:1:exon

WP_015049652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515018-515713:1:exon

TPH_RS02505
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: cysS
locus tag: TPH_RS02505
old locus tag: Tph_c04930
so part of: sequence
location: 515691..517205
location: region:515691-517205:1
so has part: feature:515691-517205:1:exon
subclass of: SO_0000010

position:515691:1
position: 515691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517205:1
position: 517205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515691-517205:1:exon

TPH_RS02505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: cysS
locus tag: TPH_RS02505
old locus tag: Tph_c04930
EC number: 6.1.1.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011026359.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine--tRNA ligase
translation: MVYNTLSRRKEEFVPGVNQVRMYVCGPTTYNFIHLGNARALVVFDTIRRYLEYKGYRVKYVQNFTDIDDKIINRAREENTSARELAEKYIGEYFRDADALRVKRATVHPRASEHIPEMIDMVRVLCEKGIAYEYGGDVYFSVRSFPGYGKLSGRTLEEMLAGARVEVDERKRDPLDFVLWKAAKPGEPFWESPWGAGRPGWHLECSVMSLKYLGFGFDIHGGGSDLIFPHHENEIAQAEAYAGSEPFARYWVHNGFVTVDEEKMSKSLGNFFLVRGLLQEWAPEILRFFLLSTHYRSPLDFNDAALKNARKSFNRLGNTLDLLNDTVGDGQGKKTAGRLAREAEAFRSRVADCVAQFEEAMDDDFNTALALAALFNMGREINGFINGDQFQPTPGVLYLLAQIREYYLNLLDVLGLVPGEKRELGEEYRQPLIRIALSLKDEAGGRLPDRLPDGPRELLELLLKIRREARQQKNYQLSDALRDALREEGIIIEDTPRGTRWRLV
SIO_010081: TPH_RS02505
subclass of: SO_0000673
so part of: TPH_RS02505
location: 515691..517205
location: region:515691-517205:1
so has part: feature:515691-517205:1:exon

WP_037999581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515691-517205:1:exon

TPH_RS02510
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: thyX
locus tag: TPH_RS02510
old locus tag: Tph_c04940
so part of: sequence
location: 517218..517934
location: region:517218-517934:1
so has part: feature:517218-517934:1:exon
subclass of: SO_0000010

position:517218:1
position: 517218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517934:1
position: 517934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517218-517934:1:exon

TPH_RS02510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: thyX
locus tag: TPH_RS02510
old locus tag: Tph_c04940
EC number: 2.1.1.148
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013431906.1
GO function: GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO process: GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent thymidylate synthase
translation: MDMKVELIAYTPEPEATVAAAARLCYSSRGAVGLKEALTDAEAASLIKRLISMGHLSPTEHASFTFAIEGVSRALSHQLVRHRIASYSQKSQRYVDENNFSYIVPPSIAAQPDALELYRKAMEELREAYRKLAGVVPREDARYLLPNAAETKLVCTMNARSLYNFFRLRCCRRAQWEIRELALKMREEVRRVAPVLFALAGPSCETEGICWEGEFSCGRAREVRSRGVAADGGDDLGA
SIO_010081: TPH_RS02510
subclass of: SO_0000673
so part of: TPH_RS02510
location: 517218..517934
location: region:517218-517934:1
so has part: feature:517218-517934:1:exon

WP_015049654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:517218-517934:1:exon

TPH_RS02515
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: rlmB
locus tag: TPH_RS02515
old locus tag: Tph_c04950
so part of: sequence
location: 517909..518655
location: region:517909-518655:1
so has part: feature:517909-518655:1:exon
subclass of: SO_0000010

position:517909:1
position: 517909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518655:1
position: 518655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517909-518655:1:exon

TPH_RS02515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: rlmB
locus tag: TPH_RS02515
old locus tag: Tph_c04950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011393958.1
GO function: GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO process: GO:0009451 - RNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
translation: MEEMIWGRNPVLEALKAGRPLNKIVVARGSRGSIGEILTRAREEGIPVQFVMRSVIDRLAEGKNHQGVAAFLSPKEYTTVESIIQQAALRREDPLVAVLVGWEDPQNLGALIRSAEAAGAHGVIIQKRRAAPLTGAVAKASAGALAHLPVSRVANLSRTLRDLKEVGLWVAGADAAGELPYYEADLAGPLALVIGGEGKGLGHLADDCDFLVRIPMAGKTGSLNAAVAGSILLFEAMRQRALRSAGTE
SIO_010081: TPH_RS02515
subclass of: SO_0000673
so part of: TPH_RS02515
location: 517909..518655
location: region:517909-518655:1
so has part: feature:517909-518655:1:exon

WP_015049655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:517909-518655:1:exon

TPH_RS02520
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02520
old locus tag: Tph_c04960
so part of: sequence
location: 518676..519206
location: region:518676-519206:1
so has part: feature:518676-519206:1:exon
subclass of: SO_0000010

position:518676:1
position: 518676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519206:1
position: 519206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518676-519206:1:exon

TPH_RS02520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02520
old locus tag: Tph_c04960
inference: COORDINATES: protein motif:HMM:NF017774.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NYN domain-containing protein
translation: MDGILLVDGYNVISSWPEFKDLKEAELAHARDRLIAILSEFRAFCGMRVIVVFDAHQVKGGTEQCEQCQGIEVVYTKEGETADNWIEKFAARQRREGTPGKPPLFVVTYDWLEQRIISAQGAYRITPEELRREIQRAKEEGKGFFQEACDRIPLDYRLPDSAKKLFENWRRRKTPG
SIO_010081: TPH_RS02520
subclass of: SO_0000673
so part of: TPH_RS02520
location: 518676..519206
location: region:518676-519206:1
so has part: feature:518676-519206:1:exon

WP_015049656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518676-519206:1:exon

TPH_RS02525
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: sigH
locus tag: TPH_RS02525
old locus tag: Tph_c04970
so part of: sequence
location: 519607..520251
location: region:519607-520251:1
so has part: feature:519607-520251:1:exon
subclass of: SO_0000010

position:519607:1
position: 519607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520251:1
position: 520251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519607-520251:1:exon

TPH_RS02525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: sigH
locus tag: TPH_RS02525
old locus tag: Tph_c04970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011393956.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sporulation sigma factor SigH
translation: MSTLARQEASEAFQCMSDEDIVELAKDGRDVALEHLINKYKNFVRAKARSYFLIGADREDIIQEGMIGLFKAIRDFRGDKLSSFRAFAELCITRQIITAIKTATCQKHIPLNSYISLNKPIYDEDSDRTLMDVISGSKISDPEELIISQEEFDDIEGKMREILSSLEWKVLMSYLEGKSYQEMAMDLNRHVKSIDNALQRVKRKLERYLEKREH
SIO_010081: TPH_RS02525
subclass of: SO_0000673
so part of: TPH_RS02525
location: 519607..520251
location: region:519607-520251:1
so has part: feature:519607-520251:1:exon

WP_015049657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519607-520251:1:exon

TPH_RS02530
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02530
old locus tag: Tph_c04980
so part of: sequence
location: 520320..520396
location: region:520320-520396:1
so has part: feature:520320-520396:1:exon
subclass of: SO_0000663

position:520320:1
position: 520320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520396:1
position: 520396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520320-520396:1:exon

TPH_RS02530
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1089553
locus tag: TPH_RS02530
old locus tag: Tph_c04980
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.9
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:520353..520355,aa:Thr,seq:tgt)
SIO_010081: TPH_RS02530
subclass of: SO_0000673
so part of: TPH_RS02530
location: 520320..520396
location: region:520320-520396:1
so has part: feature:520320-520396:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:520320-520396:1:exon

TPH_RS02535
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02535
old locus tag: Tph_c04990
so part of: sequence
location: 520411..520495
location: region:520411-520495:1
so has part: feature:520411-520495:1:exon
subclass of: SO_0000663

position:520411:1
position: 520411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520495:1
position: 520495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520411-520495:1:exon

TPH_RS02535
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1089553
locus tag: TPH_RS02535
old locus tag: Tph_c04990
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.9
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:520445..520447,aa:Tyr,seq:gta)
SIO_010081: TPH_RS02535
subclass of: SO_0000673
so part of: TPH_RS02535
location: 520411..520495
location: region:520411-520495:1
so has part: feature:520411-520495:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:520411-520495:1:exon

TPH_RS02540
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02540
old locus tag: Tph_c05000
so part of: sequence
location: 520499..520574
location: region:520499-520574:1
so has part: feature:520499-520574:1:exon
subclass of: SO_0000663

position:520499:1
position: 520499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520574:1
position: 520574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520499-520574:1:exon

TPH_RS02540
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1089553
locus tag: TPH_RS02540
old locus tag: Tph_c05000
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.9
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:520532..520534,aa:Met,seq:cat)
SIO_010081: TPH_RS02540
subclass of: SO_0000673
so part of: TPH_RS02540
location: 520499..520574
location: region:520499-520574:1
so has part: feature:520499-520574:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:520499-520574:1:exon

TPH_RS02545
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02545
old locus tag: Tph_c05010
so part of: sequence
location: 520576..520651
location: region:520576-520651:1
so has part: feature:520576-520651:1:exon
subclass of: SO_0000663

position:520576:1
position: 520576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520651:1
position: 520651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520576-520651:1:exon

TPH_RS02545
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1089553
locus tag: TPH_RS02545
old locus tag: Tph_c05010
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.9
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:520609..520611,aa:Thr,seq:ggt)
SIO_010081: TPH_RS02545
subclass of: SO_0000673
so part of: TPH_RS02545
location: 520576..520651
location: region:520576-520651:1
so has part: feature:520576-520651:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:520576-520651:1:exon

TPH_RS15325
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15325
old locus tag: Tph_c05020
so part of: sequence
location: 520869..521045
location: region:520869-521045:1
so has part: feature:520869-521045:1:exon
subclass of: SO_0000010

position:520869:1
position: 520869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521045:1
position: 521045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520869-521045:1:exon

TPH_RS15325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15325
old locus tag: Tph_c05020
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSWKRDNNNDQECNCCIRIEESFVLIVCGELDPNQLRENLKTFIEMRDNKVMANVKDE
SIO_010081: TPH_RS15325
subclass of: SO_0000673
so part of: TPH_RS15325
location: 520869..521045
location: region:520869-521045:1
so has part: feature:520869-521045:1:exon

WP_015049658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:520869-521045:1:exon

TPH_RS15615
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15615
pseudo: true
so part of: sequence
location: complement(<521291..521407)
location: region:521291-521407:-1
so has part: feature:521291-521407:-1:exon
subclass of: SO_0000010

position:521291:-1
position: 521291
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:521407:-1
position: 521407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521291-521407:-1:exon

TPH_RS15615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015050566.1
note: internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: TPH_RS15615
subclass of: SO_0000673
so part of: TPH_RS15615
location: complement(<521291..521407)
location: region:521291-521407:-1
so has part: feature:521291-521407:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:521291-521407:-1:exon

TPH_RS02550
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02550
old locus tag: Tph_c05030
so part of: sequence
location: 521854..522213
location: region:521854-522213:1
so has part: feature:521854-522213:1:exon
subclass of: SO_0000010

position:521854:1
position: 521854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522213:1
position: 522213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521854-522213:1:exon

TPH_RS02550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02550
old locus tag: Tph_c05030
inference: COORDINATES: protein motif:HMM:NF012245.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MFREPARAGEYGKGFVVVADEVWSSRRRLLTRAAELFTIEQDMKAVNAGAQEIVDNSAQIAAALDQARKGVEQIATAAQEAASASEEAAAAARQQAAGAGELERAIEEIAAMADELQQL
SIO_010081: TPH_RS02550
subclass of: SO_0000673
so part of: TPH_RS02550
location: 521854..522213
location: region:521854-522213:1
so has part: feature:521854-522213:1:exon

WP_269077491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:521854-522213:1:exon

TPH_RS02555
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02555
old locus tag: Tph_c05040
so part of: sequence
location: 522226..523821
location: region:522226-523821:1
so has part: feature:522226-523821:1:exon
subclass of: SO_0000010

position:522226:1
position: 522226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523821:1
position: 523821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522226-523821:1:exon

TPH_RS02555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02555
old locus tag: Tph_c05040
inference: COORDINATES: protein motif:HMM:NF013731.2
GO process: GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chemotaxis protein CheW
translation: MSDEKRQLVCFYLGKEKYGVNIDFVQEIIRMPVLMKAPLTPPHIEGLANLRGTILTVVNGRVRFGIERREFDESNRVIVLDYQGKRLGFIVDRVSDVVTVSEEDIEKKETGRGEFVEGVAKVTEEGSLVLIVNVEKLFPRVARKSAAAASHRTFAADDNGKTKEQEEESQLVSFRVGKEEFALEIVDVQEIVYLPEEISQVPGAPYYCEGLASLRGKLLPIIRLGSILGTGEEEFDERARVVVVNIVRGGRRLTAGLAVDGVSEVLRVPKRFIEPVPALLRTREAEFLAGICNIDSSRLVHVLDAGKLFSDADYEALLYEQGDEEEDKGTLDLRDEEEQYVTFQLDAQEYGAPISQVQEIIRVPQIFAVPRAPEFVDGVINIRGEIVPVVDLRKRFGLEERGLSEVNRIIVVDLGNARTGLIVDAVREVLGLSRGDIEQVSEVFVESGKASFLSGIGKVHQGERILILLDLLRLLSREERDELKHFSSEVEQESREELTGPGQFSGEAGEEVEEGSEPGPSTDEEDQGPGC
SIO_010081: TPH_RS02555
subclass of: SO_0000673
so part of: TPH_RS02555
location: 522226..523821
location: region:522226-523821:1
so has part: feature:522226-523821:1:exon

WP_015049660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522226-523821:1:exon

TPH_RS15890
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15890
pseudo: true
so part of: sequence
location: 523793..>523909
location: region:523793-523909:1
so has part: feature:523793-523909:1:exon
subclass of: SO_0000010

position:523793:1
position: 523793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523909:1
position: 523909
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523793-523909:1:exon

TPH_RS15890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003245823.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: chemotaxis response regulator protein-glutamate methylesterase
SIO_010081: TPH_RS15890
subclass of: SO_0000673
so part of: TPH_RS15890
location: 523793..>523909
location: region:523793-523909:1
so has part: feature:523793-523909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:523793-523909:1:exon

TPH_RS02560
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02560
old locus tag: Tph_c05050
so part of: sequence
location: 523950..524237
location: region:523950-524237:1
so has part: feature:523950-524237:1:exon
subclass of: SO_0000010

position:523950:1
position: 523950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524237:1
position: 524237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523950-524237:1:exon

TPH_RS02560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02560
old locus tag: Tph_c05050
EC number: 3.1.1.61
inference: COORDINATES: protein motif:HMM:NF013502.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein-glutamate methylesterase CheB
translation: MEVTIRSLRQFASDDQIIGVMLTGMGDDGVEEMVEIKRGGGYTIAESEETAVVGGMPRKLAKRGGADVLAPAYEIPELIFDAVEGRSLGRTQPSD
SIO_010081: TPH_RS02560
subclass of: SO_0000673
so part of: TPH_RS02560
location: 523950..524237
location: region:523950-524237:1
so has part: feature:523950-524237:1:exon

WP_015049661.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:523950-524237:1:exon

TPH_RS02565
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02565
old locus tag: Tph_c05060
so part of: sequence
location: 524212..524781
location: region:524212-524781:1
so has part: feature:524212-524781:1:exon
subclass of: SO_0000010

position:524212:1
position: 524212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524781:1
position: 524781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524212-524781:1:exon

TPH_RS02565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02565
old locus tag: Tph_c05060
inference: COORDINATES: protein motif:HMM:NF025030.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HEAT repeat domain-containing protein
translation: MEELSRLIELLNSEDELERLRAAEELGDHTSSEAVLSLVSCLEKDESRFVQEACVASLCRIGTEEVAEEVAKLLRSSNPYVRNAASEILQLLGDRAERVIELLLRDPAPDVRALAVRVVGEGLFSSASALLRSVVLNDPDVNVVASAAEYLGEIGGSREDQDALNAARARFSDPFLEFAVETAVRKMEE
SIO_010081: TPH_RS02565
subclass of: SO_0000673
so part of: TPH_RS02565
location: 524212..524781
location: region:524212-524781:1
so has part: feature:524212-524781:1:exon

WP_015049662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524212-524781:1:exon

TPH_RS02570
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02570
old locus tag: Tph_c05070
so part of: sequence
location: 524788..525150
location: region:524788-525150:1
so has part: feature:524788-525150:1:exon
subclass of: SO_0000010

position:524788:1
position: 524788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525150:1
position: 525150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524788-525150:1:exon

TPH_RS02570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02570
old locus tag: Tph_c05070
inference: COORDINATES: protein motif:HMM:NF015650.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNRPFFSIFGEEFARLTDYIYRRTGIFYDENKRYYVEKRVFDRMKATGHEKFRDYFLYLRCDASGEEFQRLVNALTVNETYFFREYDQLKCFAEEALLEMLKDKGGRQRVDLFSLGTPNR
SIO_010081: TPH_RS02570
subclass of: SO_0000673
so part of: TPH_RS02570
location: 524788..525150
location: region:524788-525150:1
so has part: feature:524788-525150:1:exon

WP_201764481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524788-525150:1:exon

TPH_RS02575
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02575
old locus tag: Tph_c05080
so part of: sequence
location: 525224..525607
location: region:525224-525607:1
so has part: feature:525224-525607:1:exon
subclass of: SO_0000010

position:525224:1
position: 525224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525607:1
position: 525607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525224-525607:1:exon

TPH_RS02575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02575
old locus tag: Tph_c05080
inference: COORDINATES: protein motif:HMM:NF012301.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MGKKILVIDDSSTVRSYYRKLLEANGFIVTEALNAYEGIEKALEEEFDLYLVDINMPKGTGVDFLREVRSNPELVAVPAAVISAEREEKDVELSLSAGANVHFAKPLKPETLLEIGRILTGEVATSG
SIO_010081: TPH_RS02575
subclass of: SO_0000673
so part of: TPH_RS02575
location: 525224..525607
location: region:525224-525607:1
so has part: feature:525224-525607:1:exon

WP_015049664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:525224-525607:1:exon

TPH_RS02580
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02580
old locus tag: Tph_c05090
so part of: sequence
location: 525600..528335
location: region:525600-528335:1
so has part: feature:525600-528335:1:exon
subclass of: SO_0000010

position:525600:1
position: 525600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528335:1
position: 528335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525600-528335:1:exon

TPH_RS02580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02580
old locus tag: Tph_c05090
inference: COORDINATES: protein motif:HMM:NF014567.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chemotaxis protein CheA
translation: MDDVLGDLVEGFHEEASELLEDLTDLILALEEDPGNKEAAEELFRKAHTLKGAAGLVGASRVSEVTHILEEVLEDIAAGKKVFRAEVADLLLQGFDYVKELVETFAAGKTADEEKHKHLLEALLTLKEGEKSSDGGQTSSPDSIGNDFLLKLAPQAWAKILDVLEEEKKSVYQVVLKFDPELFFTGQDPLLIIDDFLKAGDVIEFVCHAEELPPLDEIEPERIYTWFEIYLGAPSGVLSELEDFVEFLDPQLNFVLIREPNYESLLSSLSLDATVCRDLRNVAGSRLGNIKKLLTAIHRVLVLRPGAEETPALSNLAALLKEECLETALETHGHERLRCVVFALCVFAWMLSGCVSSGLDGESEKNVEETLKDLCRSLELLLGEQAEGKDFSGEAKPKDSFPKERKKVLKEILRQQKIYLALNRSSKDRFGPSLFRVISCIALALGCSDVAERVQLFSDLEWDACLDVLNHLEALVGGEEEGEARAAAEPGSSSSAVIQAPVQAHQPKGRAKKYLRIEESRVEKLFELAGELVVAKNSLPYLVRKLELHWGIPDAARELKERYQALEQISRELQDLAMEFRLLPVSQIFQRFPRFVRDVSRSLGKQVRLVIEGEETHFDKTVLEKIYEPLVHLVRNSLDHGIEPSEERVRLGKEAEGRLVLRAGREGHFVFIEVSDDGRGIDPGRIRDAAVEKGLLSEQAASQLSDDEVVQLIFHPGFSTAKKANELSGRGVGMDVVKDVAEQLGGSVQLSNSPGSGLTVRLTFPLTLATTKVLVVRAGGGIYGLPLEGVEEVLRVQTDQFQLLGGKEAVYLRGRTVPVVRLRELLGLTGDSSGEFSYVVVLKVGVGLVVDDFENELDVLLKPLPGELGGVNLYAGGSLLPDGSILLVLNPEELLAGGGTSSCLLLEAETL
SIO_010081: TPH_RS02580
subclass of: SO_0000673
so part of: TPH_RS02580
location: 525600..528335
location: region:525600-528335:1
so has part: feature:525600-528335:1:exon

WP_015049665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:525600-528335:1:exon

TPH_RS02585
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02585
old locus tag: Tph_c05100
so part of: sequence
location: 528305..528562
location: region:528305-528562:1
so has part: feature:528305-528562:1:exon
subclass of: SO_0000010

position:528305:1
position: 528305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528562:1
position: 528562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528305-528562:1:exon

TPH_RS02585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02585
old locus tag: Tph_c05100
inference: COORDINATES: protein motif:HMM:NF024857.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: STAS domain-containing protein
translation: MPVVRSGDTLVFTGSLTVEDAGEVKQKLQELKGATEPRLDLSGLERFDFSIAQLLLAFVREVKLIGFIPPSDTRLSNILRFLGVC
SIO_010081: TPH_RS02585
subclass of: SO_0000673
so part of: TPH_RS02585
location: 528305..528562
location: region:528305-528562:1
so has part: feature:528305-528562:1:exon

WP_015049666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528305-528562:1:exon

TPH_RS02590
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02590
old locus tag: Tph_c05110
so part of: sequence
location: 528707..529711
location: region:528707-529711:1
so has part: feature:528707-529711:1:exon
subclass of: SO_0000010

position:528707:1
position: 528707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529711:1
position: 529711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528707-529711:1:exon

TPH_RS02590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02590
old locus tag: Tph_c05110
inference: COORDINATES: protein motif:HMM:NF012245.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MDTRMLEEFFLTVRNVADIVEKVLEETRVEIRKSTEKWIEAVEQMVGSSREGIAQLKTTIAAIVSREEEKTEDLLERSRDSASQIVDTSRAAVRRFTECSEQFLGIIQELQESRFRDFKLQIEGVLRQSNILALNAGIEAARLGAAGRGLGVIAGEIQKLNKMVDESLDAIGDLVDSLESQLLEFSKTLEVVAQDSVKAIEYGERVLEASLAELDRKVDSIASALSGVGGRLDEVAGNLGAVVEVFQYQDIVSQKLGNMQGVVRELSEVLDKAVTSLSRSEFANVREELLSRIQKLYTTQSERRHHEDATGQKCVDEKRVGQVISELGENVELF
SIO_010081: TPH_RS02590
subclass of: SO_0000673
so part of: TPH_RS02590
location: 528707..529711
location: region:528707-529711:1
so has part: feature:528707-529711:1:exon

WP_148275824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528707-529711:1:exon

TPH_RS02595
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02595
old locus tag: Tph_c05120
so part of: sequence
location: 529745..530116
location: region:529745-530116:1
so has part: feature:529745-530116:1:exon
subclass of: SO_0000010

position:529745:1
position: 529745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530116:1
position: 530116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529745-530116:1:exon

TPH_RS02595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02595
old locus tag: Tph_c05120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011343949.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MSRRVLAVDDSATVRSSLKLVLQEAGCDLVLAADGEEALNKIKRSKEKFHLIITDLNMPKMNGIELIKAVRSLPDYRFVPILMLTTESQADKKLEGKKAGATGWIVKPFTPEQLIGVIQKVLR
SIO_010081: TPH_RS02595
subclass of: SO_0000673
so part of: TPH_RS02595
location: 529745..530116
location: region:529745-530116:1
so has part: feature:529745-530116:1:exon

WP_015049668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529745-530116:1:exon

TPH_RS14615
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS14615
so part of: sequence
location: 530810..530983
location: region:530810-530983:1
so has part: feature:530810-530983:1:exon
subclass of: SO_0000010

position:530810:1
position: 530810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530983:1
position: 530983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530810-530983:1:exon

TPH_RS14615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS14615
inference: COORDINATES: protein motif:HMM:NF013731.2
GO process: GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chemotaxis protein CheW
translation: MVVFDLAGELYGVDIFDVREIVGDTPVTRIPGHINPCVGRSNAHLNGHLPRKCFLRF
SIO_010081: TPH_RS14615
subclass of: SO_0000673
so part of: TPH_RS14615
location: 530810..530983
location: region:530810-530983:1
so has part: feature:530810-530983:1:exon

WP_081578577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:530810-530983:1:exon

TPH_RS02600
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02600
old locus tag: Tph_c05130
so part of: sequence
location: 531028..533058
location: region:531028-533058:1
so has part: feature:531028-533058:1:exon
subclass of: SO_0000010

position:531028:1
position: 531028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533058:1
position: 533058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531028-533058:1:exon

TPH_RS02600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02600
old locus tag: Tph_c05130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011025105.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MKEKLMGSLQVRMTVLFGLVVLIGCLVLSLMSERRTEQALEIEAKDAMLKVAKQAAETQDSRIQARLCLVKSVAAQDVIRGRWGEREAKLDEKMAALRSEMQTAAELGFKQFGIADRDGNTFFSDGGKANIADREYFKIALSGETAVSSTIVSRDDDSVVFAYAAPIRHYATNEITGVLVGLVDATMFSNLVADVTYARTGYAFAVDGNGKTIAHKDIERVLSQENLIEQAGSDNSLLAEAVSRMARGEEGVSTYTFQGQERIMAYAPVKSTGWSLAVTAPAAEVLEEVSSLKHSLLTLSVVIIIIALLLTYVMARTIATPLIVVEKHLGHIAGGDFTQLVPEKFLNMKDEIGKLARAVDGIQAGIRPLLSDLKDSAKILSGNSENLSAASEEIASSSSEAAKAIEQVAAGASEQAEHLQEILKLTENIAHHLENVENELGNVKDGSEEASRLAGVGKKELDVLIASINGVHEAFKGVVEKLTVLSNSVNQVGEILEVINSIADQTNLLALNAAIEAARAGEAGRGFAVVAEEVRKLAEESRASSEKIKGLLGTIAAETNEVVNTSESVDKQVVEQLESVNNTVRSFDDILASVAAIMPKIEETYRHMDLTLRAKDTILDRVQSISAVSEETSASAQQISASAEELSASTEEIAANAQEVLKVAKNLEEQVERFKI
SIO_010081: TPH_RS02600
subclass of: SO_0000673
so part of: TPH_RS02600
location: 531028..533058
location: region:531028-533058:1
so has part: feature:531028-533058:1:exon

WP_015049669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531028-533058:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 1089553
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00174
inference: COORDINATES: profile:INFERNAL:1.1.1
note: cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: adenosylcobalamin
so part of: sequence
location: 533319..533581
location: region:533319-533581:1
so has part: feature:533319-533581:1:region

position:533319:1
position: 533319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533581:1
position: 533581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533319-533581:1:region

TPH_RS02605
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: cbiB
locus tag: TPH_RS02605
old locus tag: Tph_c05140
so part of: sequence
location: 533685..534680
location: region:533685-534680:1
so has part: feature:533685-534680:1:exon
subclass of: SO_0000010

position:533685:1
position: 533685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534680:1
position: 534680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533685-534680:1:exon

TPH_RS02605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: cbiB
locus tag: TPH_RS02605
old locus tag: Tph_c05140
inference: COORDINATES: protein motif:HMM:TIGR00380.1
GO function: GO:0016880 - acid-ammonia (or amide) ligase activity [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenosylcobinamide-phosphate synthase CbiB
translation: MFGITAGGTLLLAVGLDLLIGDPESRFHPVALLGKAIAGLEGLLYRDAASSASRRLAGAVLVLVSAAPVCIISSLLLALLERESPLLAAAAGGFFLWSTIGANSLKREARRVLEFLQDGDLQAARERLGLIVGRDTEHLDEGEITRATVETVAENISDGVIAPLFYFAVGGVPLALTYRVINTLDSMVGYRNERYREFGWFAARLDDVANFLPARLTVLLLVAGAFLLGYDWRRALSVTWRDGRKHASPNSGYPEAAVAGALGIRLGGLNYYQGIPSLRAHLGDPLQPLERSQIAAAVRLVDAVLFLFLFLYYALFLLAGGSNIFPGGGWR
SIO_010081: TPH_RS02605
subclass of: SO_0000673
so part of: TPH_RS02605
location: 533685..534680
location: region:533685-534680:1
so has part: feature:533685-534680:1:exon

WP_015049670.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:533685-534680:1:exon

TPH_RS02610
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02610
old locus tag: Tph_c05150
so part of: sequence
location: 534677..535609
location: region:534677-535609:1
so has part: feature:534677-535609:1:exon
subclass of: SO_0000010

position:534677:1
position: 534677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535609:1
position: 535609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534677-535609:1:exon

TPH_RS02610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02610
old locus tag: Tph_c05150
inference: COORDINATES: protein motif:HMM:NF020133.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: propanediol utilization protein PduX
translation: MILQGTALMPGSCGELVQGTLQGVNFLVTCPVNWFSRVTVHVGPSLRDAYPAGRSKTARAVRKLLDWCGCEDFGAVIEVASTIPVGKGMASSTADLAAGCYAVAAALGIRPDPALIARIALSIEPSDGTFLPGIALFDHVRGRLREGLGNPLSLGILVLDFGGRVDTLGFNRRPDLRDLNRENEPQVERALDLVRQGLLQGDPVLLGQGATMSTLAHQRILPKPRLEELIDFAGRLGAYGVNVAHSGTVAGVLVAPGMERDCGFTCRILERFPELKACYPLRLVGGGPRFPGKISGRRGGGCRAEASTRG
SIO_010081: TPH_RS02610
subclass of: SO_0000673
so part of: TPH_RS02610
location: 534677..535609
location: region:534677-535609:1
so has part: feature:534677-535609:1:exon

WP_015049671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534677-535609:1:exon

TPH_RS02615
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: cobD
locus tag: TPH_RS02615
old locus tag: Tph_c05160
so part of: sequence
location: 535584..536678
location: region:535584-536678:1
so has part: feature:535584-536678:1:exon
subclass of: SO_0000010

position:535584:1
position: 535584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536678:1
position: 536678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535584-536678:1:exon

TPH_RS02615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: cobD
locus tag: TPH_RS02615
old locus tag: Tph_c05160
EC number: 4.1.1.81
inference: COORDINATES: protein motif:HMM:NF012382.2
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0048472 - threonine-phosphate decarboxylase activity [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: threonine-phosphate decarboxylase CobD
translation: MQRHQHGGDLTLMAGRYGRRPEDFLDFSVNVNPLGPSPGVASLLRDGLKYATVYPEPGCRSLKERYAPFFGVRPEQLIFTNGAVELIYLVFIALRPRTVLIPAPTFREYELAARAWGGRLKMLRLEPVKGFIPGTQSLMRAARGAELVFLCNPNNPTGSLIPPQVLETFLEFCEAEGVFAVVDESFLLFHPRWRELTAGTAAAASRRLLVLQSLTKFFAIPGLRLGCGIAHPETISLLARFHPPWQVNGLAQAAALAALQDEGYAFRSRHLVEEERSRLAAALSALPGIRVYSSEASYLLIELASPLSAPFVAERLAQRGILVRDCSNFAFLDERFIRVAVKGRRENELLVRELAGLLAGVFKT
SIO_010081: TPH_RS02615
subclass of: SO_0000673
so part of: TPH_RS02615
location: 535584..536678
location: region:535584-536678:1
so has part: feature:535584-536678:1:exon

WP_015049672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:535584-536678:1:exon

TPH_RS02620
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02620
old locus tag: Tph_c05180
so part of: sequence
location: 537109..537804
location: region:537109-537804:1
so has part: feature:537109-537804:1:exon
subclass of: SO_0000010

position:537109:1
position: 537109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537804:1
position: 537804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537109-537804:1:exon

TPH_RS02620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02620
old locus tag: Tph_c05180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011392736.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO process: GO:0000041 - transition metal ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: energy-coupling factor ABC transporter permease
translation: MHIMEGFLPAKWCLFWWLLTIPFILVGMFSISKTVERHPQLKMLLGVAGAFAFVLSALKIPSVTGSCSHPTGVGLGAILFGPAAMSVLGCIVLLFQALLLAHGGITTLGANAFSMAVVGPFVAYYIYKLCCRLKAPLWLGVFLAAMLGDLLTYVTTSLQLALAFPAQVGGFTASLVKFMGIFAVTQLPLAVSEGLLTVVVFNLLAAYNRRELKELSVLGGESRFTEGAGMR
SIO_010081: TPH_RS02620
subclass of: SO_0000673
so part of: TPH_RS02620
location: 537109..537804
location: region:537109-537804:1
so has part: feature:537109-537804:1:exon

WP_148275953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:537109-537804:1:exon

TPH_RS02625
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02625
old locus tag: Tph_c05190
so part of: sequence
location: 537807..538133
location: region:537807-538133:1
so has part: feature:537807-538133:1:exon
subclass of: SO_0000010

position:537807:1
position: 537807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538133:1
position: 538133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537807-538133:1:exon

TPH_RS02625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02625
old locus tag: Tph_c05190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015738941.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]; GO:0006824 - cobalt ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: energy-coupling factor ABC transporter substrate-binding protein
translation: MRNLLLILLVVLLAALPLWLQRGAEFGGADGLAEEAIGELRPGYEPWFKTLWEPPSGEVESLLFALQAALGAGFIGYYLGYGKGKRDASNAGRGTAPDEKSLDAFRRT
SIO_010081: TPH_RS02625
subclass of: SO_0000673
so part of: TPH_RS02625
location: 537807..538133
location: region:537807-538133:1
so has part: feature:537807-538133:1:exon

WP_201764518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:537807-538133:1:exon

TPH_RS02630
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: cbiQ
locus tag: TPH_RS02630
old locus tag: Tph_c05200
so part of: sequence
location: 538208..539011
location: region:538208-539011:1
so has part: feature:538208-539011:1:exon
subclass of: SO_0000010

position:538208:1
position: 538208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539011:1
position: 539011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538208-539011:1:exon

TPH_RS02630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: cbiQ
locus tag: TPH_RS02630
old locus tag: Tph_c05200
inference: COORDINATES: protein motif:HMM:NF014420.2
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0032778 - P-type cobalt transporter activity [Evidence IEA]
GO process: GO:0006824 - cobalt ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cobalt ECF transporter T component CbiQ
translation: MLKIDQYAYTNRLAGMHPAEKALLAVLTLVVGLVFFTPLVSLSIIAVMAVMTVVRAGIPLRFYCKLMLLPFAFLVLGVFTVALTVAGDGASFLWSVRIGGYAVGVTASGLQQAGELFLKSLGAVSCLYFLSLTTPLVEVLAVLHRMRFPSLLIELMSLVYRFIFVLLETADKIYISQSSRWGYASLKTSYRSLGQLLSSLFGKAYYNSQMLFLALSSRCYTGKLNLLERPLTFSRKNMALIVLLQILLIAIGRLAPAGMGIPWRCTG
SIO_010081: TPH_RS02630
subclass of: SO_0000673
so part of: TPH_RS02630
location: 538208..539011
location: region:538208-539011:1
so has part: feature:538208-539011:1:exon

WP_015049676.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:538208-539011:1:exon

TPH_RS02635
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02635
old locus tag: Tph_c05210
so part of: sequence
location: 538993..539886
location: region:538993-539886:1
so has part: feature:538993-539886:1:exon
subclass of: SO_0000010

position:538993:1
position: 538993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539886:1
position: 539886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538993-539886:1:exon

TPH_RS02635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02635
old locus tag: Tph_c05210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009051828.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MEVYRLKSEAILETKNLSFSYFDGNPALVDLSISIPAGKRIAFLGPNGAGKTTLFLHFNGLMKPERGKVYVAGKEIRYDRASLLEVRKKVGIVFQDPDTQLFSASVRQEVAFGPLNLGLPREAVLRLVDKAMEETDIGDLQERPTHFLSYGQKKRVAIADILAMQPQVLICDEPTAWLDAVHARRVMGILSDINSRGVTVIISTHDVDLAYSWAEYIFVMKAGRVIGEGTPDRVFADGDLLREAELAKPFVAEVYEELTARGWVKPDAPPRSVEELLARIRDGDGAAGRAASGSGRE
SIO_010081: TPH_RS02635
subclass of: SO_0000673
so part of: TPH_RS02635
location: 538993..539886
location: region:538993-539886:1
so has part: feature:538993-539886:1:exon

WP_148275825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:538993-539886:1:exon

TPH_RS02640
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: cbiD
locus tag: TPH_RS02640
old locus tag: Tph_c05220
so part of: sequence
location: 540030..541235
location: region:540030-541235:1
so has part: feature:540030-541235:1:exon
subclass of: SO_0000010

position:540030:1
position: 540030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541235:1
position: 541235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540030-541235:1:exon

TPH_RS02640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: cbiD
locus tag: TPH_RS02640
old locus tag: Tph_c05220
EC number: 2.1.1.195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011392602.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cobalt-precorrin-5B (C(1))-methyltransferase CbiD
translation: MTDEMGVGQMFLERECPVGYRRHEGKLLRRGYTTGTCAAAAGRAAALALLGQNPEQVTVRLPGGSLVSLRVGGWERFADRARAWVIKDAGDDPDVTHGARIEATVRFFPGEGVEVLGGCGVGVVTRPGLAVQPGRPAINPGPLQMIRENVAAVLPSGCAAEVVIAVPDGERLAQKTMNPRLGIVGGISILGTTGIVEPMSEEAFRQALLPQLQIARSAGIGTLIFTPGRSGVRLAQQLLASPPEAVILTSNFIGFLLEECRRLGFRRVVLWGHVGKLAKVAAGVFQTHNRVADGRAEVVAALAGTLGAEASLLLRILEAPTVEAMVVLLKEAGLQGVWRHLAERASRRAVDYARGDLSVGTVLFSHKEGVLGCDRTAIALLTEAGWLKGAQGLPPGGPGCI
SIO_010081: TPH_RS02640
subclass of: SO_0000673
so part of: TPH_RS02640
location: 540030..541235
location: region:540030-541235:1
so has part: feature:540030-541235:1:exon

WP_015049678.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:540030-541235:1:exon

TPH_RS15620
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: cbiE
locus tag: TPH_RS15620
old locus tag: Tph_c05230
so part of: sequence
location: 541145..542710
location: region:541145-542710:1
so has part: feature:541145-542710:1:exon
subclass of: SO_0000010

position:541145:1
position: 541145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542710:1
position: 542710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541145-542710:1:exon

TPH_RS15620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: cbiE
locus tag: TPH_RS15620
old locus tag: Tph_c05230
inference: COORDINATES: protein motif:HMM:TIGR02467.1
GO function: GO:0046025 - precorrin-6Y C5,15-methyltransferase (decarboxylating) activity [Evidence IEA]
GO process: GO:0046140 - corrin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE
translation: MRPDGNRPAHRGRLAEGGSGPAAGRAGLHLRPGIALTLELSAAGLALKGCVIIVRKGMVAVACVTVVGIGPGSRDYLLPAALEAVKEADVLVGGRNALALFASPEKEQRLLDRNLEGALDYIAAAAKKKRVAVLLSGDPCFFSLLPRLRERLGPENLRVIPGISSVQLACARIGLPWHDLRFVSVHGRGLEQLESVGDAGKVAVLTEERYPPAAVCRFFMERGAGFAAVWVFTDLGLPGELITRTDLSGGARLKGRGNSVVILLRDEDVFPGFQAEGGAVSEEPGCSPAGGERIADYMASPDDRTGGTAASGSGSPAAPGREWADVVTPGLPEDLFLRGEAPISQEEVRALVLCKAGLRRGMVVYEIGAGTGSWTVEVARLIAPGFVWAVERDPVAAGLVRSNLKRFGLSNAAVVEGEAPAACAGFPKADCVLVGGSGGKLQMIIAAAESWLRPGGCLVLSAVTPDTFSTAWQQLQGEGWERQEAVLLNLARVVPRGSARIWQGENPVFLLRAFSTGGKEE
SIO_010081: TPH_RS15620
subclass of: SO_0000673
so part of: TPH_RS15620
location: 541145..542710
location: region:541145-542710:1
so has part: feature:541145-542710:1:exon

WP_201764482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:541145-542710:1:exon

TPH_RS02650
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: cobI
locus tag: TPH_RS02650
old locus tag: Tph_c05240
so part of: sequence
location: 542707..543441
location: region:542707-543441:1
so has part: feature:542707-543441:1:exon
subclass of: SO_0000010

position:542707:1
position: 542707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543441:1
position: 543441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542707-543441:1:exon

TPH_RS02650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: cobI
locus tag: TPH_RS02650
old locus tag: Tph_c05240
EC number: 2.1.1.130
inference: COORDINATES: protein motif:HMM:TIGR01467.1
GO function: GO:0030788 - precorrin-2 C20-methyltransferase activity [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: precorrin-2 C(20)-methyltransferase
translation: MSKTGKLYGIGVGPGSPDLLTLKAVRILQEVPLVFVPRGERGERSRALEIISPFLRDQEVREFVAPMTRDRSALDRMWRQAGEEVLAVLDGGKDAAFLTLGDSLLYSTYSYLLETLLRLRPGLEVETVPGIASFSAAAALCNRALCCGQESLAVVPATRGMGFLKEVLNTFENVVLLKVAPVFDELLALLAEVGRLDEAAYICRCGMDGQFLLGSLAAAAEVPRDYFSLVLVGNRKGREGGHGL
SIO_010081: TPH_RS02650
subclass of: SO_0000673
so part of: TPH_RS02650
location: 542707..543441
location: region:542707-543441:1
so has part: feature:542707-543441:1:exon

WP_015049680.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:542707-543441:1:exon

TPH_RS02655
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: cobM
locus tag: TPH_RS02655
old locus tag: Tph_c05250
so part of: sequence
location: 543438..544235
location: region:543438-544235:1
so has part: feature:543438-544235:1:exon
subclass of: SO_0000010

position:543438:1
position: 543438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544235:1
position: 544235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543438-544235:1:exon

TPH_RS02655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: cobM
locus tag: TPH_RS02655
old locus tag: Tph_c05250
EC number: 2.1.1.133
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015738947.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0046026 - precorrin-4 C11-methyltransferase activity [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: precorrin-4 C(11)-methyltransferase
translation: MSGIAGSGIVYFVGAGPGDPELITLKGKRLLQEAGLVLYAGSLVNKELLNFVHPGVPCHDTAGLTLEEALALIKEGVAAGKTVVRLHTGDPALYGAVQEQMDALEREGIPYRVVPGVSSFLAAAALLGRELTVPGGTQTVILTRQGGRTPVPPQESLKELGRHGSTICLFLSAGLLQQAAADLMLHLSPETPAAVVERASWPDERVIRTTLGNLADAARSAGITRTALVFVGDFLASRGKRSLLYDPRFSHGYRWGREEQDDGRD
SIO_010081: TPH_RS02655
subclass of: SO_0000673
so part of: TPH_RS02655
location: 543438..544235
location: region:543438-544235:1
so has part: feature:543438-544235:1:exon

WP_015049681.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:543438-544235:1:exon

TPH_RS02660
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02660
old locus tag: Tph_c05260
so part of: sequence
location: 544222..545325
location: region:544222-545325:1
so has part: feature:544222-545325:1:exon
subclass of: SO_0000010

position:544222:1
position: 544222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545325:1
position: 545325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544222-545325:1:exon

TPH_RS02660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02660
old locus tag: Tph_c05260
inference: COORDINATES: protein motif:HMM:NF014006.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cobalt-precorrin 5A hydrolase
translation: MAGIKEGIGALPGRVAVIYLTPAGGVLAERLERELPEKGIEVEVLPPTADPAGLVRGCWGRYEGLALIMAVGIAVRLIAPLLKSKWEDPGVVVVDEGGKFAVSLLGGHWGKGNSLTRLTASILGATPVVTTATDVQGRQAVDTLARGWGMRPVPRELVKRVNGAILRGERVVLYTEWALPERCRLPGMEVVPWRGDGAALAAAEGRPVLITSRLPQAALSGCLCLCPPSLAAGIGCKRGVSAAEVEEALNQALRRAGRRRESVAVLASHEAKVDEVGLLEVARKWGLTLVFFGAGVLGRILNENPGLADSEFVRQQMGVGGVCETAALAAVPVGELVLDKTRLGRVTVALAEAGLLWSESGLALRRI
SIO_010081: TPH_RS02660
subclass of: SO_0000673
so part of: TPH_RS02660
location: 544222..545325
location: region:544222-545325:1
so has part: feature:544222-545325:1:exon

WP_015049682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:544222-545325:1:exon

TPH_RS02665
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: cobJ
locus tag: TPH_RS02665
old locus tag: Tph_c05270
so part of: sequence
location: 545289..546014
location: region:545289-546014:1
so has part: feature:545289-546014:1:exon
subclass of: SO_0000010

position:545289:1
position: 545289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546014:1
position: 546014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545289-546014:1:exon

TPH_RS02665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: cobJ
locus tag: TPH_RS02665
old locus tag: Tph_c05270
EC number: 2.1.1.131
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011392608.1
GO function: GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: precorrin-3B C(17)-methyltransferase
translation: MVGIGPGAPEDLSGRALEALRQAEVIVGYRPYIRLLEGVLSPEQEVIGSGMRQELERARLAVDLACSGRRVAVVSSGDAGVYGMAGPVLELLGKSGGRDRVEFQVVPGITAASAAAALLGAPLMHDFAVISLSDLLTPWEVILQRIEAAAKGDFVIVFYNPRSKKRVNQIGEAREVILKYRRPDTPVGIVTSVGRPGQMLVISDLNGFLSQEINMHSLVVVGNSRSYVRDGFLITPRGYRL
SIO_010081: TPH_RS02665
subclass of: SO_0000673
so part of: TPH_RS02665
location: 545289..546014
location: region:545289-546014:1
so has part: feature:545289-546014:1:exon

WP_015049683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:545289-546014:1:exon

TPH_RS02670
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: cobK
locus tag: TPH_RS02670
old locus tag: Tph_c05280
so part of: sequence
location: 546029..546829
location: region:546029-546829:1
so has part: feature:546029-546829:1:exon
subclass of: SO_0000010

position:546029:1
position: 546029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546829:1
position: 546829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546029-546829:1:exon

TPH_RS02670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: cobK
locus tag: TPH_RS02670
old locus tag: Tph_c05280
EC number: 1.3.1.54
inference: COORDINATES: protein motif:HMM:TIGR00715.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0016994 - precorrin-6A reductase activity [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: precorrin-6A reductase
translation: MLLVLAGTKDGRDLAGILAAEGFRVLASAATAYGGELLQEVPGIAVHVGRLDAEGLNRLMEAYDIKGIVDATHPFAVEISRLAREAAASRRIPCLCWERPPASLCKENSQLLHRAADWEGAVRCLAALRAKRLFLAVGVRPLAFFVNHPALRGRHFLVRVLPLPEAVAACRRLGLRPEQICALQGPVTQELNRALLEHFRAEALVTKESGPAGGTGEKVAAALSLGIPVVLVDRPRVESAAPKASTVEEVLRWAAEVEGRRDYDKL
SIO_010081: TPH_RS02670
subclass of: SO_0000673
so part of: TPH_RS02670
location: 546029..546829
location: region:546029-546829:1
so has part: feature:546029-546829:1:exon

WP_015049684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:546029-546829:1:exon

TPH_RS02675
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02675
old locus tag: Tph_c05290
so part of: sequence
location: 546816..547886
location: region:546816-547886:1
so has part: feature:546816-547886:1:exon
subclass of: SO_0000010

position:546816:1
position: 546816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547886:1
position: 547886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546816-547886:1:exon

TPH_RS02675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02675
old locus tag: Tph_c05290
EC number: 5.4.99.61
inference: COORDINATES: protein motif:HMM:NF014612.2
GO function: GO:0016993 - precorrin-8X methylmutase activity [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: precorrin-8X methylmutase
translation: MISYKEDGMMSVEKGILLLGHGSRRQDANEGLKALAAMAAAGLGVPVDPVYFQFGRPTLAEGVARLVAEGKKEIIIIPAFLFPGMHLHKDVPEALEDLRLQYGDEVRFVLTPCIGPDPRLVEIVWERLQEAAGEVSTNGRLSGERVCDPGAITALSRALIEDNIGEEFFRKRFPGGEGEIVRRVVHALGNPAVAPLMRFHPEAVAAGVAALKRGALLFTDVRMVQVGINKGALKELKGKAVCLIHHPRVCAAARAAGVTRAMAAVRAFKEQLPGSVVVIGNAPTALEEVLDQVERGLEPALIVGTPVGFVGAAESKARLLESRVPYITLLGRQGGSPAAVAVVNALLALARGEAGL
SIO_010081: TPH_RS02675
subclass of: SO_0000673
so part of: TPH_RS02675
location: 546816..547886
location: region:546816-547886:1
so has part: feature:546816-547886:1:exon

WP_201764483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:546816-547886:1:exon

TPH_RS02680
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02680
old locus tag: Tph_c05300
so part of: sequence
location: 548044..549588
location: region:548044-549588:1
so has part: feature:548044-549588:1:exon
subclass of: SO_0000010

position:548044:1
position: 548044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549588:1
position: 549588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548044-549588:1:exon

TPH_RS02680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02680
old locus tag: Tph_c05300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011343699.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cobyric acid synthase
translation: MATAIMVQGTASNVGKSILVTALCRILYRDGYRVAPFKAQNMALNSFVTENGGEMGRAQALQAQAAGLKPRVEMNPVLLKPTGNASSQVIVLGRPIGNMTARDYHLGKNLDLLQVIEEALARLRQDYDVIVIEGAGSPAEVNLKESDLANMRIARLAEAPVLLVADIDRGGALASVVGTLALLDPEEAELVKGVVINKFRGDLSLLRPALEILEQKTGRPVLGVLPYLNLRLPAEDSVCLDDGDSGQGGEIDIAVIFLPRISNFTDFDPLALEPGVRVRYVRDGEPLGNPDLVILPGTKNTTEDLLYLYETGYAAAVRRAARQGIPVCGICGGFQMLGRELRDPQHIESTRDGLPGLGLLDAVTTFAADKVLAQAKGEICASEGPFAGLTGMQVEGYEIHMGRTELGPGERPLLRVRERRGSSAAGWDGAVDRKGLVWGTYFHGLFDNDHLRRGLLEWLRRRRGLQERPQVEVDSCALLEKELDRLADVCRASLDMEKVYRLMGLVPPAAPGRP
SIO_010081: TPH_RS02680
subclass of: SO_0000673
so part of: TPH_RS02680
location: 548044..549588
location: region:548044-549588:1
so has part: feature:548044-549588:1:exon

WP_015049686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548044-549588:1:exon

TPH_RS02690
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: murJ
locus tag: TPH_RS02690
old locus tag: Tph_c05310
so part of: sequence
location: 550009..551616
location: region:550009-551616:1
so has part: feature:550009-551616:1:exon
subclass of: SO_0000010

position:550009:1
position: 550009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551616:1
position: 551616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550009-551616:1:exon

TPH_RS02690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: murJ
locus tag: TPH_RS02690
old locus tag: Tph_c05310
inference: COORDINATES: protein motif:HMM:TIGR01695.1
GO process: GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: murein biosynthesis integral membrane protein MurJ
translation: MRKEQLFKAAGIIAAASLCSKILGFFRETALAAVFGATKATDAYLVASIIPWMLFSVASSALTTTLIPVFTRRLHDAGAEAGDRFINNVINFVLLFCLVMVLLGVVFAPLLVRIVAPGFQGETARLTVELTRILLPMMIFLGLAAVITGYLQARQRFTWPALVGIPFNIIMILAIVLGGRAWGIAAVAVGTVLATVSQLFTMAPGLKGFRYRLLLDWQDPGLRRLVRLIIPILLATGAGQLGLVVDRMLASGLAEGSISALNFGSRLTQLPLGIFIMAVTTVLYPTFSQYAAEGDLGGLRRALVAGVRVSLFLTIPMAVGLIVLREPIVRVLFERGAFDSRATSMTAYAVLFFSLGLVPMALREVISRIYFSLQDTITPMLLGLGAVAVNIGLNFLLVRPLAHGGLALATSLASFFAVVLLFSCLRQRLGGLGGRMMWDCCWRVAIAAAFMGCGVSSFYRMAAGLAAGRGFLADAGLLLVSICLGVALYALGAVLLRLPETGLFLDFARKASRRLLSGGRRVFCQQQKAKGIDRL
SIO_010081: TPH_RS02690
subclass of: SO_0000673
so part of: TPH_RS02690
location: 550009..551616
location: region:550009-551616:1
so has part: feature:550009-551616:1:exon

WP_015049687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:550009-551616:1:exon

TPH_RS02695
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: fbp
locus tag: TPH_RS02695
old locus tag: Tph_c05320
so part of: sequence
location: complement(551669..552766)
location: region:551669-552766:-1
so has part: feature:551669-552766:-1:exon
subclass of: SO_0000010

position:551669:-1
position: 551669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552766:-1
position: 552766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551669-552766:-1:exon

TPH_RS02695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: fbp
locus tag: TPH_RS02695
old locus tag: Tph_c05320
EC number: 3.1.3.11
EC number: 4.1.2.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015738690.1
GO function: GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]; GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
GO process: GO:0006094 - gluconeogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fructose-1,6-bisphosphate aldolase/phosphatase
translation: MGKKITLTVIKADVGGCVGHSSVHPELLEKAKEMLSGSPLLIDSYVTHVGDDINLIMTHEAGRNNGEVHQLAWDVFVACTDVAKKLKLYGAGQDLLADAFSGNIKGLGPGIAEMEFEERESEPVIIFMADKTEPGAWNLPLYKMFADPFNTIGLVIDPKMHKGFDFDVRDTVENKKIIFSTPEEIYDMLVFIGAPGRFCVKRVFQRETGDIAAVSSTQRLNLMAGRYVGKDDPVCIVRCQSGFPAVGEALEPFTYPHLVAGWMRGSHNGPLMPVALKDAHPTRFDGPPRVIALGFQLSEGKLIGPQDLFDDPAFDRARELANNVADYMRRMGPFEPHRLPLDEMEYTTMPQVSKRLKERFISLRK
SIO_010081: TPH_RS02695
subclass of: SO_0000673
so part of: TPH_RS02695
location: complement(551669..552766)
location: region:551669-552766:-1
so has part: feature:551669-552766:-1:exon

WP_015049688.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:551669-552766:-1:exon

TPH_RS02700
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
gene: galU
locus tag: TPH_RS02700
old locus tag: Tph_c05330
so part of: sequence
location: 553505..554473
location: region:553505-554473:1
so has part: feature:553505-554473:1:exon
subclass of: SO_0000010

position:553505:1
position: 553505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554473:1
position: 554473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553505-554473:1:exon

TPH_RS02700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
gene: galU
locus tag: TPH_RS02700
old locus tag: Tph_c05330
EC number: 2.7.7.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011345448.1
GO function: GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO process: GO:0009225 - nucleotide-sugar metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UTP--glucose-1-phosphate uridylyltransferase GalU
translation: MQKNEVRKAIIPAAGWGTRFLPATKAQPKEMLPIVDKPAIQYTVEEAVASGIEDIIIVTGRNKRAIEDHFDRALELEIILKEKGQEELLHLIEDISNLVDIHYVRQKEALGLGHAVYCARKFIGDEPFAVLLGDDLIDAQVPCLRQLLDIYEERRAPVLAIQQVPEEDVSRYGIIRPAALEDSASLFRVEDLVEKPAVGEAPSRYAVIGRYIITPEIFDIIETLPPGAGGEIQLTDALCRLAKRRPIYAYLFSGERYDVGDKLGFLEATVKFALGRPELGRSFLGFLRKLVLENHEDGGEMDAGESGGRSQQGAAVPPARWR
SIO_010081: TPH_RS02700
subclass of: SO_0000673
so part of: TPH_RS02700
location: 553505..554473
location: region:553505-554473:1
so has part: feature:553505-554473:1:exon

WP_015049689.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:553505-554473:1:exon

TPH_RS15065
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS15065
so part of: sequence
location: 554409..554636
location: region:554409-554636:1
so has part: feature:554409-554636:1:exon
subclass of: SO_0000010

position:554409:1
position: 554409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554636:1
position: 554636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554409-554636:1:exon

TPH_RS15065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS15065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013821630.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl except: (pos:554544..554546,aa:Sec)
transl table: 11
product: NifU family protein
translation: MRERVEAVLNKVRPFLQRDGGDVELVDVDEQQGIVKVRLKGACGGUAMAIVTLKQGIERSLKQEVPEVTQVVAVR
SIO_010081: TPH_RS15065
subclass of: SO_0000673
so part of: TPH_RS15065
location: 554409..554636
location: region:554409-554636:1
so has part: feature:554409-554636:1:exon

WP_155990793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:554409-554636:1:exon

TPH_RS02705
type: Gene
subclass of: SO_0000704
RO_0002162: 1089553
locus tag: TPH_RS02705
old locus tag: Tph_c05340
so part of: sequence
location: complement(554681..555391)
location: region:554681-555391:-1
so has part: feature:554681-555391:-1:exon
subclass of: SO_0000010

position:554681:-1
position: 554681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555391:-1
position: 555391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554681-555391:-1:exon

TPH_RS02705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1089553
locus tag: TPH_RS02705
old locus tag: Tph_c05340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003866838.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OmpA family protein
translation: MRRRTSVESKGPDMGRWLLTYSDMITLLMIFFITMYVISNVNMEKFRALAENLSITLRGTPSGLLPDGAAILPGEGGEAAQMAQVEAELKEYLEKQNLRHQVTVRQEERGLVISFQETILFAKGSATLTPEARRVISRVGNILKEVPNYIRVEGHTCDLPIHTPQFPSNWELSSARATNVVRELITASGIPPERLSATGYGEYRPRYPNDTEEHRQLNRRIDILILRTEYRQVEPE
SIO_010081: TPH_RS02705
subclass of: SO_0000673
so part of: TPH_RS02705
location: complement(554681..555391)
location: region:554681-555391:-1
so has part: feature:554681-555391:-1:exon

WP_015049690.1
type: Protein
SIO_000068: ncbiprotein