Nilaparvata lugens isolate BPH chromosome 14, ASM1435652v1, whole genome shotgun sequence.
type: Entry
definition: Nilaparvata lugens isolate BPH chromosome 14, ASM1435652v1, whole genome shotgun sequence.
sequence version: NC_052517.1
sequence date: 2021-02-12
sequence: sequence
division: CON
label: NC_052517.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA695432
dblink: SAMN13382557
keyword: WGS
keyword: RefSeq
source: Nilaparvata lugens (brown planthopper)
organism: Nilaparvata lugens
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Auchenorrhyncha; Fulgoroidea; Delphacidae; Delphacinae; Nilaparvata.
reference: 1
references: 32780934
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM025318.1.\nAssembly name: ASM1435652v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Huazhong Agricultural\nUniversity on 2020/09/09. The original whole-genome shotgun project\nhas the accession WOVF00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Huazhong Agricultural University\nAssembly Method :: WTDBG v. 2.1; SmartDenovo v. 1.5; HiC-Pro\n v. 2.7.8\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 418x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Nilaparvata lugens Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 23179391
topology: linear
so has quality: SO_0000987
location: 1..23179391
location: region:1-23179391:1
RO_0002162: 108931

NC_052517
type: RefSeq
SIO_000068: refseq

PRJNA695432
type: BioProject
SIO_000068: bioproject

SAMN13382557
type: BioSample
SIO_000068: biosample

1
title: Chromosomal-level genomes of three rice planthoppers provide new insights into sex chromosome evolution
author: Ma, W.
author: Le, X.
author: Hua, H.
author: Chen, M.
author: Guo, M.
author: He, K.
author: Zhao, J.
author: Li, F.
journal: Mol Ecol Resour (2020) In press
pubmed: 32780934
comments: Publication Status: Available-Online prior to print

32780934
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23179391:1
position: 23179391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-23179391:1:source
so part of: sequence
organism: Nilaparvata lugens
mol type: genomic DNA
isolate: BPH
host: rice
chromosome: 14
tissue type: whole body
country: China: Wuhan
collection date: 15-Jun-2018

108931
type: Taxonomy
SIO_000068: taxonomy

LOC120354247
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354247
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3407..4012)
location: region:3407-4012:-1
so has part: feature:3407-4012:-1:exon
subclass of: SO_0000010

120354247
type: Gene
SIO_000068: ncbigene

position:3407:-1
position: 3407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4012:-1
position: 4012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3407-4012:-1:exon

LOC120354247
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354247
product: uncharacterized LOC120354247
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_039441121.1
SIO_010081: LOC120354247
subclass of: SO_0000673
so part of: LOC120354247
location: complement(3407..4012)
location: region:3407-4012:-1
so has part: feature:3407-4012:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3407-4012:-1:exon

LOC120354247
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354247
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120354247
translation: MFAREEPLAEVMNKFWETEDVQINAKLLSPEDELCEQLYESTTYRNDGRYVVALPFKPSAPVLVSNRKQAYRSHLGLLKRLENSSELKKKYDNFMTEYHELSHLELAKSTSDYVIPHHAVFKNKDPTQKIRVVFNASSKDTNGHSLNENLLPGPKLQSNIIQVLTKFRTYKYIVLSDCKQMYRQILLRPEDCRHQHVFLET
SIO_010081: LOC120354247
subclass of: SO_0000673
so part of: LOC120354247
location: complement(3407..4012)
location: region:3407-4012:-1
so has part: feature:3407-4012:-1:exon

XP_039297055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3407-4012:-1:exon

LOC120354130
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354130
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(83721..85801)
location: region:83721-85801:-1
so has part: feature:83721-85801:-1:exon
subclass of: SO_0000011

120354130
type: Gene
SIO_000068: ncbigene

position:83721:-1
position: 83721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85801:-1
position: 85801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83721-85801:-1:exon

LOC120354130
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC120354130
product: uncharacterized LOC120354130
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 54% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XR_005572829.1
SIO_010081: LOC120354130
subclass of: SO_0000673
so part of: LOC120354130
location: complement(join(83721..84840,85517..85801))
location: region:83721-85801:-1
so has part: feature:85517-85801:-1:exon
so has part: feature:83721-84840:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:85517-85801:-1:exon

position:85517:-1
position: 85517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:83721-84840:-1:exon

position:84840:-1
position: 84840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354248
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354248
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(177548..179018)
location: region:177548-179018:-1
so has part: feature:177548-179018:-1:exon
subclass of: SO_0000010

120354248
type: Gene
SIO_000068: ncbigene

position:177548:-1
position: 177548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179018:-1
position: 179018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177548-179018:-1:exon

LOC120354248
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354248
product: uncharacterized LOC120354248
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_039441122.1
SIO_010081: LOC120354248
subclass of: SO_0000673
so part of: LOC120354248
location: complement(join(177548..177748,178668..179018))
location: region:177548-179018:-1
so has part: feature:178668-179018:-1:exon
so has part: feature:177548-177748:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:178668-179018:-1:exon

position:178668:-1
position: 178668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:177548-177748:-1:exon

position:177748:-1
position: 177748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354248
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354248
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120354248
translation: MSSPSSSSSSFILPDSPPAHQRILNYWQQKAALAAESSATAPAPSPLTVEPPSPGEIVLGDSPLQRLAPPATWAPRRAVLTSLSNKIKQKQGKRRLSFEEPEVSGEEDEETIYSQTKKRAGMEHASSLAPLMKEVQGTGEVELDFVQLINQPVAKPWVQLRELKEDAPYLIIGAREHTNKHGR
SIO_010081: LOC120354248
subclass of: SO_0000673
so part of: LOC120354248
location: complement(join(177548..177748,178668..179018))
location: region:177548-179018:-1
so has part: feature:178668-179018:-1:exon
so has part: feature:177548-177748:-1:exon

XP_039297056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:178668-179018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:177548-177748:-1:exon

LOC120354132
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354132
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 204015..251751
location: region:204015-251751:1
so has part: feature:204015-251751:1:exon
subclass of: SO_0000010

120354132
type: Gene
SIO_000068: ncbigene

position:204015:1
position: 204015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251751:1
position: 251751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204015-251751:1:exon

LOC120354132
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354132
product: probable chitinase 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 30 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_039440426.1
SIO_010081: LOC120354132
subclass of: SO_0000673
so part of: LOC120354132
location: join(204015..204245,207579..207780,210603..210706,213093..213318,217109..217537,219134..219319,220750..221063,222602..222797,226872..227014,229644..229923,230757..230936,236588..236799,237820..237955,245464..245606,246191..246376,250231..250356,251605..251751)
location: region:204015-251751:1
so has part: feature:204015-204245:1:exon
so has part: feature:207579-207780:1:exon
so has part: feature:210603-210706:1:exon
so has part: feature:213093-213318:1:exon
so has part: feature:217109-217537:1:exon
so has part: feature:219134-219319:1:exon
so has part: feature:220750-221063:1:exon
so has part: feature:222602-222797:1:exon
so has part: feature:226872-227014:1:exon
so has part: feature:229644-229923:1:exon
so has part: feature:230757-230936:1:exon
so has part: feature:236588-236799:1:exon
so has part: feature:237820-237955:1:exon
so has part: feature:245464-245606:1:exon
so has part: feature:246191-246376:1:exon
so has part: feature:250231-250356:1:exon
so has part: feature:251605-251751:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:204015-204245:1:exon

position:204245:1
position: 204245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:207579-207780:1:exon

position:207579:1
position: 207579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207780:1
position: 207780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:210603-210706:1:exon

position:210603:1
position: 210603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210706:1
position: 210706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:213093-213318:1:exon

position:213093:1
position: 213093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213318:1
position: 213318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:217109-217537:1:exon

position:217109:1
position: 217109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217537:1
position: 217537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:219134-219319:1:exon

position:219134:1
position: 219134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219319:1
position: 219319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:220750-221063:1:exon

position:220750:1
position: 220750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221063:1
position: 221063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:222602-222797:1:exon

position:222602:1
position: 222602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222797:1
position: 222797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:226872-227014:1:exon

position:226872:1
position: 226872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227014:1
position: 227014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:229644-229923:1:exon

position:229644:1
position: 229644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229923:1
position: 229923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:230757-230936:1:exon

position:230757:1
position: 230757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230936:1
position: 230936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:236588-236799:1:exon

position:236588:1
position: 236588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236799:1
position: 236799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:237820-237955:1:exon

position:237820:1
position: 237820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237955:1
position: 237955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:245464-245606:1:exon

position:245464:1
position: 245464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245606:1
position: 245606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:246191-246376:1:exon

position:246191:1
position: 246191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246376:1
position: 246376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:250231-250356:1:exon

position:250231:1
position: 250231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250356:1
position: 250356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:251605-251751:1:exon

position:251605:1
position: 251605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120354132
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354132
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable chitinase 10
translation: MRALSQHADFVNVMSFDYHGAWEHETGHVAPLYPTAGEMFPDYNVDSTVKHLIELGADRSKLVVGIPFYGQSFTLAAPDKGNGLGEETVDPGESGEFTKQPGMLAYYEICYKISKQNWKAETSDVGPYAYSGDQWVSYDDPTSIKQKAKYILTEKLGGAMAWTIDLDDFHNRCCKGHTFPLLRALNSGLGRIKGPVTSTQDCTKPTLPSTPPPVLTTLTPDNGLVSPEATSEMSSSSTTTTTQSWWTEEPSTSSTTTTKPTTSDTTTTKPISTKPTTSSTTTTTTTEEEPETTDEEEPEEETTTSSTTTTTTRRPTTKRPKPTRPKPTKPRPSSTTSKPSSKPTRPSKPKPPPLPPPTLPPSEEVGATELPSSCTSGEYRADPSDCNAYYRCILGEFRRQRCAGSLHWNSKLQVCDWPQQAKCQTKPGHIESSTSTSTTERPDEWWTQSSSTWWSPELTTPPHHTTTTTSTTSTPWWTPQSTTWWPTSSSTTTTTHKPSSSTKRPATTKRPKPSRPSSKPTHRPTRPSTTTTEAPPPSPPEACTDGQYYPVREACDQYEVCVNGQLLRLRCAPGLLFNHVIGVCDWAHNVQCHSSQRMELEWSRKSAGCSKGQFTAHPSNCNQYLQCQWGAYQIYSCPPGLHWNAKNNICDWPSRSTCRVTSPSNPQGGSKPDNKPPSGSSKPVSLATTSTNRPEWEWKPDPTSTSNPQWEWKPETTPKPKPIPNKPSKPSGKHPLANGPFKVVCYFTNWAWYRTGPAKYLPEDIDTNLCTHVLYGFAVLDFENLIIKAHDSWADFDNKFYERVVAMKKKGVHVLLAIGGWNDSQGDKYSRLVNSAASRQRFIQHVVPFLLKYDFDGLDLDWEYPKCWQVNCDKGPASDKESFGLFVKELKTAFRSHDLLLSAAVSPSKAVIDEGYDVKTMAKYLDWISVMTYDYHGQWDKKTGHLAPMYYHPEDDFDYFNANYSINYWLSEGVPKHKLVMGMPLYGQSFTLAKREQHGLNAPAPGPGQAGESTRAAGFLAYYEICSRIKNGGWTVVQDEEQRMGPYAYNGDQWISFDDKDTIRRKSEWIREMGIGGGMIWALDLDDFRNTCGGGKHPLLTIIAKTLAKPGQGL
SIO_010081: LOC120354132
subclass of: SO_0000673
so part of: LOC120354132
location: join(204111..204245,207579..207780,210603..210706,213093..213318,217109..217537,219134..219319,220750..221063,222602..222797,226872..227014,229644..229923,230757..230936,236588..236799,237820..237955,245464..245606,246191..246376,250231..250356,251605..251751)
location: region:204111-251751:1
so has part: feature:204111-204245:1:exon
so has part: feature:207579-207780:1:exon
so has part: feature:210603-210706:1:exon
so has part: feature:213093-213318:1:exon
so has part: feature:217109-217537:1:exon
so has part: feature:219134-219319:1:exon
so has part: feature:220750-221063:1:exon
so has part: feature:222602-222797:1:exon
so has part: feature:226872-227014:1:exon
so has part: feature:229644-229923:1:exon
so has part: feature:230757-230936:1:exon
so has part: feature:236588-236799:1:exon
so has part: feature:237820-237955:1:exon
so has part: feature:245464-245606:1:exon
so has part: feature:246191-246376:1:exon
so has part: feature:250231-250356:1:exon
so has part: feature:251605-251751:1:exon

XP_039296360.1
type: Protein
SIO_000068: ncbiprotein

position:204111:1
position: 204111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204111-204245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207579-207780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:210603-210706:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:213093-213318:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:217109-217537:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:219134-219319:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:220750-221063:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:222602-222797:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:226872-227014:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:229644-229923:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:230757-230936:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:236588-236799:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:237820-237955:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:245464-245606:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:246191-246376:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:250231-250356:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:251605-251751:1:exon

LOC111049507
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111049507
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 266006..293777
location: region:266006-293777:1
so has part: feature:266006-293777:1:exon
subclass of: SO_0000010

111049507
type: Gene
SIO_000068: ncbigene

position:266006:1
position: 266006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293777:1
position: 293777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266006-293777:1:exon

LOC111049507
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111049507
product: zinc finger protein 41, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_039440427.1
SIO_010081: LOC111049507
subclass of: SO_0000673
so part of: LOC111049507
location: join(266006..266305,267959..268047,268978..269058,271701..271977,274957..275179,284418..284672,287507..287776,290809..293777)
location: region:266006-293777:1
so has part: feature:266006-266305:1:exon
so has part: feature:267959-268047:1:exon
so has part: feature:268978-269058:1:exon
so has part: feature:271701-271977:1:exon
so has part: feature:274957-275179:1:exon
so has part: feature:284418-284672:1:exon
so has part: feature:287507-287776:1:exon
so has part: feature:290809-293777:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:266006-266305:1:exon

position:266305:1
position: 266305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:267959-268047:1:exon

position:267959:1
position: 267959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268047:1
position: 268047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:268978-269058:1:exon

position:268978:1
position: 268978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269058:1
position: 269058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:271701-271977:1:exon

position:271701:1
position: 271701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271977:1
position: 271977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:274957-275179:1:exon

position:274957:1
position: 274957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275179:1
position: 275179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:284418-284672:1:exon

position:284418:1
position: 284418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284672:1
position: 284672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:287507-287776:1:exon

position:287507:1
position: 287507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287776:1
position: 287776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:290809-293777:1:exon

position:290809:1
position: 290809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111049507
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111049507
product: zinc finger protein 41, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039440428.1
SIO_010081: LOC111049507
subclass of: SO_0000673
so part of: LOC111049507
location: join(266020..266305,267959..268047,268978..269058,271701..271977,274957..275179,284418..284672,287507..287776,290809..291309,291349..293777)
location: region:266020-293777:1
so has part: feature:266020-266305:1:exon
so has part: feature:267959-268047:1:exon
so has part: feature:268978-269058:1:exon
so has part: feature:271701-271977:1:exon
so has part: feature:274957-275179:1:exon
so has part: feature:284418-284672:1:exon
so has part: feature:287507-287776:1:exon
so has part: feature:290809-291309:1:exon
so has part: feature:291349-293777:1:exon

position:266020:1
position: 266020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266020-266305:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:267959-268047:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268978-269058:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:271701-271977:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:274957-275179:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:284418-284672:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:287507-287776:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:290809-291309:1:exon

position:291309:1
position: 291309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:291349-293777:1:exon

position:291349:1
position: 291349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111049507
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111049507
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 26 isoform X1
translation: MDAYFSSLNCDKNMHYDTEGIGALASVFVPKIELADNEQDSSCPTPSSGDMNNTVSNETYHTDRDHPDDLNSTVSNGTFHTDPDEEEDMEEEEEEEDKKPVKQVYTCHVCNKNFNWKGNLITHMRCHSGEEERPRYPCHICFKVFNWKSNLKTHLNRLHYFGDQPLPKYKCSLCTKQFTWKNSLTTHVQVMHASGDGTQSEPQKLSCEVCGKQFTWKSNLNTHMESHTRASKLACPICHKLFNWKSNLKAHMNTAHLYPHALQKHQCTQCHKLFNSKASLQKHTDTIHNEKPEKHACTICKREFLWKSNLATHEARHADEGGKRFTCTVCGKGFGWRSNLNKHMETHDASTPKHQCPECNHKFASKSGLTMHMAKHYDQGRFVCHVCNKSFTWKANYNVHMASKHPDVDRSAYYSSSSSSSSSTSDHHTFHPPPHQLIEQKTFTDLDSPENLEANRSAAASPFVVEDQKIQNGGSFVTSDQKMQNGMRATCELAYPSPAAYSMQMGKDACESVSSPNRLMPNCEPVSSASRMMPNCESVSSASRLMPNCESVLSASRLMPNCEPVSSPNRLMPNCESISSSSRMMPNCEPVSASSRMMPNCEPVSASSRMMPNCEPVSASSRMMPNCEPVSSPIRLMPNCEPVSSPIRLMPNCEPVSASSRMMPNCEPVSSPID
SIO_010081: LOC111049507
subclass of: SO_0000673
so part of: LOC111049507
location: join(268012..268047,268978..269058,271701..271977,274957..275179,284418..284672,287507..287776,290809..291691)
location: region:268012-291691:1
so has part: feature:268012-268047:1:exon
so has part: feature:268978-269058:1:exon
so has part: feature:271701-271977:1:exon
so has part: feature:274957-275179:1:exon
so has part: feature:284418-284672:1:exon
so has part: feature:287507-287776:1:exon
so has part: feature:290809-291691:1:exon

XP_039296361.1
type: Protein
SIO_000068: ncbiprotein

position:268012:1
position: 268012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291691:1
position: 291691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268012-268047:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:268978-269058:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:271701-271977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274957-275179:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:284418-284672:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:287507-287776:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:290809-291691:1:exon

LOC111049507
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111049507
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 358 isoform X2
translation: MDAYFSSLNCDKNMHYDTEGIGALASVFVPKIELADNEQDSSCPTPSSGDMNNTVSNETYHTDRDHPDDLNSTVSNGTFHTDPDEEEDMEEEEEEEDKKPVKQVYTCHVCNKNFNWKGNLITHMRCHSGEEERPRYPCHICFKVFNWKSNLKTHLNRLHYFGDQPLPKYKCSLCTKQFTWKNSLTTHVQVMHASGDGTQSEPQKLSCEVCGKQFTWKSNLNTHMESHTRASKLACPICHKLFNWKSNLKAHMNTAHLYPHALQKHQCTQCHKLFNSKASLQKHTDTIHNEKPEKHACTICKREFLWKSNLATHEARHADEGGKRFTCTVCGKGFGWRSNLNKHMETHDASTPKHQCPECNHKFASKSGLTMHMAKHYDQGRFVCHVCNKSFTWKANYNVHMASKHPDVDRSAYYSSSSSSSSSTSDHHTFHPPPHQLIEQKTFTDLDSPENLEANRSAAASPFVVEDQKIQNGGSFVTSDQKMQNGMRATCELAYPSPAAYSMQMGKDACESVSSPNRLMPNCEPVSSASRMMPNCESVSSASRLMPNCEPVSSPNRLMPNCESISSSSRMMPNCEPVSASSRMMPNCEPVSASSRMMPNCEPVSASSRMMPNCEPVSSPIRLMPNCEPVSSPIRLMPNCEPVSASSRMMPNCEPVSSPID
SIO_010081: LOC111049507
subclass of: SO_0000673
so part of: LOC111049507
location: join(268012..268047,268978..269058,271701..271977,274957..275179,284418..284672,287507..287776,290809..291309,291349..291691)
location: region:268012-291691:1
so has part: feature:268012-268047:1:exon
so has part: feature:268978-269058:1:exon
so has part: feature:271701-271977:1:exon
so has part: feature:274957-275179:1:exon
so has part: feature:284418-284672:1:exon
so has part: feature:287507-287776:1:exon
so has part: feature:290809-291309:1:exon
so has part: feature:291349-291691:1:exon

XP_039296362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268012-268047:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:268978-269058:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:271701-271977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274957-275179:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:284418-284672:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:287507-287776:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:290809-291309:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:291349-291691:1:exon

LOC111049507
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111049507
product: zinc finger protein 41, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_039440429.1
SIO_010081: LOC111049507
subclass of: SO_0000673
so part of: LOC111049507
location: join(268976..269087,271701..271977,274957..275179,284418..284672,287507..287776,290809..293777)
location: region:268976-293777:1
so has part: feature:268976-269087:1:exon
so has part: feature:271701-271977:1:exon
so has part: feature:274957-275179:1:exon
so has part: feature:284418-284672:1:exon
so has part: feature:287507-287776:1:exon
so has part: feature:290809-293777:1:exon

position:268976:1
position: 268976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268976-269087:1:exon

position:269087:1
position: 269087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:271701-271977:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274957-275179:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284418-284672:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:287507-287776:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:290809-293777:1:exon

LOC111049507
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111049507
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 41 isoform X3
translation: MNNTVSNETYHTDRDHPDDLNSTVSNGTFHTDPDEEEDMEEEEEEEDKKPVKQVYTCHVCNKNFNWKGNLITHMRCHSGEEERPRYPCHICFKVFNWKSNLKTHLNRLHYFGDQPLPKYKCSLCTKQFTWKNSLTTHVQVMHASGDGTQSEPQKLSCEVCGKQFTWKSNLNTHMESHTRASKLACPICHKLFNWKSNLKAHMNTAHLYPHALQKHQCTQCHKLFNSKASLQKHTDTIHNEKPEKHACTICKREFLWKSNLATHEARHADEGGKRFTCTVCGKGFGWRSNLNKHMETHDASTPKHQCPECNHKFASKSGLTMHMAKHYDQGRFVCHVCNKSFTWKANYNVHMASKHPDVDRSAYYSSSSSSSSSTSDHHTFHPPPHQLIEQKTFTDLDSPENLEANRSAAASPFVVEDQKIQNGGSFVTSDQKMQNGMRATCELAYPSPAAYSMQMGKDACESVSSPNRLMPNCEPVSSASRMMPNCESVSSASRLMPNCESVLSASRLMPNCEPVSSPNRLMPNCESISSSSRMMPNCEPVSASSRMMPNCEPVSASSRMMPNCEPVSASSRMMPNCEPVSSPIRLMPNCEPVSSPIRLMPNCEPVSASSRMMPNCEPVSSPID
SIO_010081: LOC111049507
subclass of: SO_0000673
so part of: LOC111049507
location: join(271734..271977,274957..275179,284418..284672,287507..287776,290809..291691)
location: region:271734-291691:1
so has part: feature:271734-271977:1:exon
so has part: feature:274957-275179:1:exon
so has part: feature:284418-284672:1:exon
so has part: feature:287507-287776:1:exon
so has part: feature:290809-291691:1:exon

XP_039296363.1
type: Protein
SIO_000068: ncbiprotein

position:271734:1
position: 271734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271734-271977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274957-275179:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284418-284672:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:287507-287776:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:290809-291691:1:exon

LOC120354249
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354249
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(311196..312432)
location: region:311196-312432:-1
so has part: feature:311196-312432:-1:exon
subclass of: SO_0000010

120354249
type: Gene
SIO_000068: ncbigene

position:311196:-1
position: 311196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312432:-1
position: 312432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311196-312432:-1:exon

LOC120354249
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354249
product: uncharacterized LOC120354249
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_039441123.1
SIO_010081: LOC120354249
subclass of: SO_0000673
so part of: LOC120354249
location: complement(join(311196..312090,312312..312432))
location: region:311196-312432:-1
so has part: feature:312312-312432:-1:exon
so has part: feature:311196-312090:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:312312-312432:-1:exon

position:312312:-1
position: 312312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:311196-312090:-1:exon

position:312090:-1
position: 312090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354249
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354249
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120354249
translation: MDISVTPVQSNERARKPKKSPLQWKKAKLKTERYKPKSMPDKPTCGHSSQSFQCCSLDMCDLKKFHSLFYKKTEKEYQDHFVLKYVEIVNVRRRRPNQRKNQNEVSKYKKQMRSTRYFVLNKKKERVPVCLNAFIGILGISRFRVNNITKTFHEQGFITEKRGGFKRTAEFAPKKINVMKFIEKLQCIESHYCRKESNRKYLSSDLSIKKLFMMYSAENGNVPVKESYFRNIFNTNYNLGFRSPRTDVCSTCLCLQEKIKAESDPGKKSNLLIEKRVHKLRAKAFYNKLQDTDENLLILSFDCQKNLPIPKLPDQSTIIQDKFMYRIFQL
SIO_010081: LOC120354249
subclass of: SO_0000673
so part of: LOC120354249
location: complement(join(311196..312090,312312..312409))
location: region:311196-312409:-1
so has part: feature:312312-312409:-1:exon
so has part: feature:311196-312090:-1:exon

XP_039297057.1
type: Protein
SIO_000068: ncbiprotein

position:312409:-1
position: 312409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312312-312409:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:311196-312090:-1:exon

LOC111055424
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111055424
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 313486..445083
location: region:313486-445083:1
so has part: feature:313486-445083:1:exon

111055424
type: Gene
SIO_000068: ncbigene

position:313486:1
position: 313486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445083:1
position: 445083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313486-445083:1:exon

LOC111055424
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 108931
gene: LOC111055424
product: probable chitinase 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 56 long SRA reads, 71 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_005572930.1
SIO_010081: LOC111055424
so part of: LOC111055424
location: join(313486..313642,325635..325899,327870..327985,329631..329858,332529..332711,334362..334540,340893..341045,342585..342699,345133..345452,354841..355111,356164..356679,358651..358728,361795..361995,364183..364454,368209..368436,371766..371967,374787..374890,377267..377492,380758..381182,384296..384340,384372..384479,387268..387573,390285..390480,394514..394656,397957..398236,399721..399900,401460..401671,403005..403140,406049..406191,406462..406671,410036..410161,411495..411633,412519..412525,412675..412852,416557..416780,417780..417913,418595..418812,424685..424820,426641..426783,428343..428528,431304..431497,433764..433937,437255..437398,441820..441946,444452..445083)
location: region:313486-445083:1
so has part: feature:313486-313642:1:exon
so has part: feature:325635-325899:1:exon
so has part: feature:327870-327985:1:exon
so has part: feature:329631-329858:1:exon
so has part: feature:332529-332711:1:exon
so has part: feature:334362-334540:1:exon
so has part: feature:340893-341045:1:exon
so has part: feature:342585-342699:1:exon
so has part: feature:345133-345452:1:exon
so has part: feature:354841-355111:1:exon
so has part: feature:356164-356679:1:exon
so has part: feature:358651-358728:1:exon
so has part: feature:361795-361995:1:exon
so has part: feature:364183-364454:1:exon
so has part: feature:368209-368436:1:exon
so has part: feature:371766-371967:1:exon
so has part: feature:374787-374890:1:exon
so has part: feature:377267-377492:1:exon
so has part: feature:380758-381182:1:exon
so has part: feature:384296-384340:1:exon
so has part: feature:384372-384479:1:exon
so has part: feature:387268-387573:1:exon
so has part: feature:390285-390480:1:exon
so has part: feature:394514-394656:1:exon
so has part: feature:397957-398236:1:exon
so has part: feature:399721-399900:1:exon
so has part: feature:401460-401671:1:exon
so has part: feature:403005-403140:1:exon
so has part: feature:406049-406191:1:exon
so has part: feature:406462-406671:1:exon
so has part: feature:410036-410161:1:exon
so has part: feature:411495-411633:1:exon
so has part: feature:412519-412525:1:exon
so has part: feature:412675-412852:1:exon
so has part: feature:416557-416780:1:exon
so has part: feature:417780-417913:1:exon
so has part: feature:418595-418812:1:exon
so has part: feature:424685-424820:1:exon
so has part: feature:426641-426783:1:exon
so has part: feature:428343-428528:1:exon
so has part: feature:431304-431497:1:exon
so has part: feature:433764-433937:1:exon
so has part: feature:437255-437398:1:exon
so has part: feature:441820-441946:1:exon
so has part: feature:444452-445083:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:313486-313642:1:exon

position:313642:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:325635-325899:1:exon

position:325635:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325899:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:327870-327985:1:exon

position:327870:1
position: 327870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327985:1
position: 327985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:329631-329858:1:exon

position:329631:1
position: 329631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329858:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:332529-332711:1:exon

position:332529:1
position: 332529
reference: sequence
type: ForwardStrandPosition
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position:332711:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:334362-334540:1:exon

position:334362:1
position: 334362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334540:1
position: 334540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:340893-341045:1:exon

position:340893:1
position: 340893
reference: sequence
type: ForwardStrandPosition
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position:341045:1
position: 341045
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 8
SIO_000628: feature:342585-342699:1:exon

position:342585:1
position: 342585
reference: sequence
type: ForwardStrandPosition
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position:342699:1
position: 342699
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 9
SIO_000628: feature:345133-345452:1:exon

position:345133:1
position: 345133
reference: sequence
type: ForwardStrandPosition
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position:345452:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 10
SIO_000628: feature:354841-355111:1:exon

position:354841:1
position: 354841
reference: sequence
type: ForwardStrandPosition
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position:355111:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 11
SIO_000628: feature:356164-356679:1:exon

position:356164:1
position: 356164
reference: sequence
type: ForwardStrandPosition
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position:356679:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 12
SIO_000628: feature:358651-358728:1:exon

position:358651:1
position: 358651
reference: sequence
type: ForwardStrandPosition
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position:358728:1
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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:361795-361995:1:exon

position:361795:1
position: 361795
reference: sequence
type: ForwardStrandPosition
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position:361995:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 14
SIO_000628: feature:364183-364454:1:exon

position:364183:1
position: 364183
reference: sequence
type: ForwardStrandPosition
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position:364454:1
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reference: sequence
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urn:…
SIO_000300: 15
SIO_000628: feature:368209-368436:1:exon

position:368209:1
position: 368209
reference: sequence
type: ForwardStrandPosition
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position:368436:1
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reference: sequence
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urn:…
SIO_000300: 16
SIO_000628: feature:371766-371967:1:exon

position:371766:1
position: 371766
reference: sequence
type: ForwardStrandPosition
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position:371967:1
position: 371967
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 17
SIO_000628: feature:374787-374890:1:exon

position:374787:1
position: 374787
reference: sequence
type: ForwardStrandPosition
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position:374890:1
position: 374890
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 18
SIO_000628: feature:377267-377492:1:exon

position:377267:1
position: 377267
reference: sequence
type: ForwardStrandPosition
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position:377492:1
position: 377492
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 19
SIO_000628: feature:380758-381182:1:exon

position:380758:1
position: 380758
reference: sequence
type: ForwardStrandPosition
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position:381182:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 20
SIO_000628: feature:384296-384340:1:exon

position:384296:1
position: 384296
reference: sequence
type: ForwardStrandPosition
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position:384340:1
position: 384340
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 21
SIO_000628: feature:384372-384479:1:exon

position:384372:1
position: 384372
reference: sequence
type: ForwardStrandPosition
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position:384479:1
position: 384479
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 22
SIO_000628: feature:387268-387573:1:exon

position:387268:1
position: 387268
reference: sequence
type: ForwardStrandPosition
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position:387573:1
position: 387573
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 23
SIO_000628: feature:390285-390480:1:exon

position:390285:1
position: 390285
reference: sequence
type: ForwardStrandPosition
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position:390480:1
position: 390480
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 24
SIO_000628: feature:394514-394656:1:exon

position:394514:1
position: 394514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394656:1
position: 394656
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 25
SIO_000628: feature:397957-398236:1:exon

position:397957:1
position: 397957
reference: sequence
type: ForwardStrandPosition
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position:398236:1
position: 398236
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 26
SIO_000628: feature:399721-399900:1:exon

position:399721:1
position: 399721
reference: sequence
type: ForwardStrandPosition
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position:399900:1
position: 399900
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 27
SIO_000628: feature:401460-401671:1:exon

position:401460:1
position: 401460
reference: sequence
type: ForwardStrandPosition
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position:401671:1
position: 401671
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 28
SIO_000628: feature:403005-403140:1:exon

position:403005:1
position: 403005
reference: sequence
type: ForwardStrandPosition
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position:403140:1
position: 403140
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 29
SIO_000628: feature:406049-406191:1:exon

position:406049:1
position: 406049
reference: sequence
type: ForwardStrandPosition
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position:406191:1
position: 406191
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 30
SIO_000628: feature:406462-406671:1:exon

position:406462:1
position: 406462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406671:1
position: 406671
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 31
SIO_000628: feature:410036-410161:1:exon

position:410036:1
position: 410036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410161:1
position: 410161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:411495-411633:1:exon

position:411495:1
position: 411495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411633:1
position: 411633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:412519-412525:1:exon

position:412519:1
position: 412519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412525:1
position: 412525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:412675-412852:1:exon

position:412675:1
position: 412675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412852:1
position: 412852
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 35
SIO_000628: feature:416557-416780:1:exon

position:416557:1
position: 416557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416780:1
position: 416780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:417780-417913:1:exon

position:417780:1
position: 417780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417913:1
position: 417913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:418595-418812:1:exon

position:418595:1
position: 418595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418812:1
position: 418812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:424685-424820:1:exon

position:424685:1
position: 424685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424820:1
position: 424820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:426641-426783:1:exon

position:426641:1
position: 426641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426783:1
position: 426783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:428343-428528:1:exon

position:428343:1
position: 428343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428528:1
position: 428528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:431304-431497:1:exon

position:431304:1
position: 431304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431497:1
position: 431497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:433764-433937:1:exon

position:433764:1
position: 433764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433937:1
position: 433937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:437255-437398:1:exon

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position: 437255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437398:1
position: 437398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:441820-441946:1:exon

position:441820:1
position: 441820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441946:1
position: 441946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:444452-445083:1:exon

position:444452:1
position: 444452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111055423
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111055423
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 447968..498396
location: region:447968-498396:1
so has part: feature:447968-498396:1:exon
subclass of: SO_0000010

111055423
type: Gene
SIO_000068: ncbigene

position:447968:1
position: 447968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498396:1
position: 498396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447968-498396:1:exon

LOC111055423
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111055423
product: serine-enriched protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_039440431.1
SIO_010081: LOC111055423
subclass of: SO_0000673
so part of: LOC111055423
location: join(447968..448351,451588..451865,453479..453614,473958..474075,474260..474417,475344..475475,478626..478808,487756..487908,498335..498396)
location: region:447968-498396:1
so has part: feature:447968-448351:1:exon
so has part: feature:451588-451865:1:exon
so has part: feature:453479-453614:1:exon
so has part: feature:473958-474075:1:exon
so has part: feature:474260-474417:1:exon
so has part: feature:475344-475475:1:exon
so has part: feature:478626-478808:1:exon
so has part: feature:487756-487908:1:exon
so has part: feature:498335-498396:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:447968-448351:1:exon

position:448351:1
position: 448351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:451588-451865:1:exon

position:451588:1
position: 451588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451865:1
position: 451865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:453479-453614:1:exon

position:453479:1
position: 453479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453614:1
position: 453614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:473958-474075:1:exon

position:473958:1
position: 473958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474075:1
position: 474075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:474260-474417:1:exon

position:474260:1
position: 474260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474417:1
position: 474417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:475344-475475:1:exon

position:475344:1
position: 475344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475475:1
position: 475475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:478626-478808:1:exon

position:478626:1
position: 478626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478808:1
position: 478808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:487756-487908:1:exon

position:487756:1
position: 487756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487908:1
position: 487908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:498335-498396:1:exon

position:498335:1
position: 498335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111055423
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 108931
gene: LOC111055423
product: serine-enriched protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_005572830.1
SIO_010081: LOC111055423
so part of: LOC111055423
location: join(447968..448351,451588..451865,453479..453614,473958..474075,474260..474417,475344..475475,478626..478808,487760..487908,498335..498396)
location: region:447968-498396:1
so has part: feature:447968-448351:1:exon
so has part: feature:451588-451865:1:exon
so has part: feature:453479-453614:1:exon
so has part: feature:473958-474075:1:exon
so has part: feature:474260-474417:1:exon
so has part: feature:475344-475475:1:exon
so has part: feature:478626-478808:1:exon
so has part: feature:487760-487908:1:exon
so has part: feature:498335-498396:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:447968-448351:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:451588-451865:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:453479-453614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:473958-474075:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474260-474417:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475344-475475:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478626-478808:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:487760-487908:1:exon

position:487760:1
position: 487760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:498335-498396:1:exon

LOC111055423
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111055423
product: serine-enriched protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_039440432.1
SIO_010081: LOC111055423
subclass of: SO_0000673
so part of: LOC111055423
location: join(447968..448351,451588..451865,453479..453614,473958..474075,474260..474417,475344..475475,478626..478808,487760..487954)
location: region:447968-487954:1
so has part: feature:447968-448351:1:exon
so has part: feature:451588-451865:1:exon
so has part: feature:453479-453614:1:exon
so has part: feature:473958-474075:1:exon
so has part: feature:474260-474417:1:exon
so has part: feature:475344-475475:1:exon
so has part: feature:478626-478808:1:exon
so has part: feature:487760-487954:1:exon

position:487954:1
position: 487954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447968-448351:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:451588-451865:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:453479-453614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:473958-474075:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474260-474417:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475344-475475:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478626-478808:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:487760-487954:1:exon

LOC111055423
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111055423
product: serine-enriched protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_039440430.1
SIO_010081: LOC111055423
subclass of: SO_0000673
so part of: LOC111055423
location: join(448462..448590,451588..451865,453479..453614,473958..474075,474260..474417,475344..475475,478626..478808,487756..488139)
location: region:448462-488139:1
so has part: feature:448462-448590:1:exon
so has part: feature:451588-451865:1:exon
so has part: feature:453479-453614:1:exon
so has part: feature:473958-474075:1:exon
so has part: feature:474260-474417:1:exon
so has part: feature:475344-475475:1:exon
so has part: feature:478626-478808:1:exon
so has part: feature:487756-488139:1:exon

position:448462:1
position: 448462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488139:1
position: 488139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448462-448590:1:exon

position:448590:1
position: 448590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:451588-451865:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:453479-453614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:473958-474075:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474260-474417:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475344-475475:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478626-478808:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:487756-488139:1:exon

LOC111055423
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111055423
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine-enriched protein isoform X2
translation: MPEVQPSVSCVGAGATALVTLGGGGAEGGAGALVDLEPDLSTFENKTGLAEDMKFLASMPELCDVTFLVGDTREPVCAVKAVLAARSRVFQKMLYQAPSPSRKKEPPPKENKLRLFLKRSSEPLLNLQNAAAQPSSNQHFTLIVEEFEPDVFRQLIEYIHTGCVTLQPRTLLGVMNAADYYGLDALRHACAGFVQCCINVDTVCALLASAERYIQYKCTKSLVQKVLEFVDEHGNEVLNLGSFTLLPQHVVRLILAREELRADEFTKFQAALMWSKKYCDSNQNTVLKDVIGNFLEYIQFHKIPANVLMKEVHPLGLVPYSIIMNALAYQADPTSVEPSKLSPNRVRRSAQGRSMSVQSSLDPYGSNTTLSSSGSNQSSEMAVKAAVTRSKSTNM
SIO_010081: LOC111055423
subclass of: SO_0000673
so part of: LOC111055423
location: join(451603..451865,453479..453614,473958..474075,474260..474417,475344..475475,478626..478808,487756..487908,498335..498379)
location: region:451603-498379:1
so has part: feature:451603-451865:1:exon
so has part: feature:453479-453614:1:exon
so has part: feature:473958-474075:1:exon
so has part: feature:474260-474417:1:exon
so has part: feature:475344-475475:1:exon
so has part: feature:478626-478808:1:exon
so has part: feature:487756-487908:1:exon
so has part: feature:498335-498379:1:exon

XP_039296365.1
type: Protein
SIO_000068: ncbiprotein

position:451603:1
position: 451603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498379:1
position: 498379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451603-451865:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:453479-453614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:473958-474075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474260-474417:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:475344-475475:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478626-478808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:487756-487908:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:498335-498379:1:exon

LOC111055423
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111055423
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine-enriched protein isoform X1
translation: MPEVQPSVSCVGAGATALVTLGGGGAEGGAGALVDLEPDLSTFENKTGLAEDMKFLASMPELCDVTFLVGDTREPVCAVKAVLAARSRVFQKMLYQAPSPSRKKEPPPKENKLRLFLKRSSEPLLNLQNAAAQPSSNQHFTLIVEEFEPDVFRQLIEYIHTGCVTLQPRTLLGVMNAADYYGLDALRHACAGFVQCCINVDTVCALLASAERYIQYKCTKSLVQKVLEFVDEHGNEVLNLGSFTLLPQHVVRLILAREELRADEFTKFQAALMWSKKYCDSNQNTVLKDVIGNFLEYIQFHKIPANVLMKEVHPLGLVPYSIIMNALAYQADPTSVEPSKLSPNRVRRSAQGRSMSVQSSLDPYGSNTTLSSSGSNQSSEMVSSDTTPHKTSTSN
SIO_010081: LOC111055423
subclass of: SO_0000673
so part of: LOC111055423
location: join(451603..451865,453479..453614,473958..474075,474260..474417,475344..475475,478626..478808,487756..487953)
location: region:451603-487953:1
so has part: feature:451603-451865:1:exon
so has part: feature:453479-453614:1:exon
so has part: feature:473958-474075:1:exon
so has part: feature:474260-474417:1:exon
so has part: feature:475344-475475:1:exon
so has part: feature:478626-478808:1:exon
so has part: feature:487756-487953:1:exon

XP_039296364.1
type: Protein
SIO_000068: ncbiprotein

position:487953:1
position: 487953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451603-451865:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:453479-453614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:473958-474075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474260-474417:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:475344-475475:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478626-478808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:487756-487953:1:exon

LOC111055423
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111055423
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine-enriched protein isoform X3
translation: MPEVQPSVSCVGAGATALVTLGGGGAEGGAGALVDLEPDLSTFENKTGLAEDMKFLASMPELCDVTFLVGDTREPVCAVKAVLAARSRVFQKMLYQAPSPSRKKEPPPKENKLRLFLKRSSEPLLNLQNAAAQPSSNQHFTLIVEEFEPDVFRQLIEYIHTGCVTLQPRTLLGVMNAADYYGLDALRHACAGFVQCCINVDTVCALLASAERYIQYKCTKSLVQKVLEFVDEHGNEVLNLGSFTLLPQHVVRLILAREELRADEFTKFQAALMWSKKYCDSNQNTVLKDVIGNFLEYIQFHKIPANVLMKEVHPLGLVPYSIIMNALAYQTQQVSSPASSPQTE
SIO_010081: LOC111055423
subclass of: SO_0000673
so part of: LOC111055423
location: join(451603..451865,453479..453614,473958..474075,474260..474417,475344..475475,478626..478808,487760..487804)
location: region:451603-487804:1
so has part: feature:451603-451865:1:exon
so has part: feature:453479-453614:1:exon
so has part: feature:473958-474075:1:exon
so has part: feature:474260-474417:1:exon
so has part: feature:475344-475475:1:exon
so has part: feature:478626-478808:1:exon
so has part: feature:487760-487804:1:exon

XP_039296366.1
type: Protein
SIO_000068: ncbiprotein

position:487804:1
position: 487804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451603-451865:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:453479-453614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:473958-474075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474260-474417:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:475344-475475:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478626-478808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:487760-487804:1:exon

LOC111055423
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111055423
product: serine-enriched protein, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_039440433.1
SIO_010081: LOC111055423
subclass of: SO_0000673
so part of: LOC111055423
location: join(458418..458550,460057..460095,473958..474075,474260..474417,475344..475475,478626..478808,487756..488139)
location: region:458418-488139:1
so has part: feature:458418-458550:1:exon
so has part: feature:460057-460095:1:exon
so has part: feature:473958-474075:1:exon
so has part: feature:474260-474417:1:exon
so has part: feature:475344-475475:1:exon
so has part: feature:478626-478808:1:exon
so has part: feature:487756-488139:1:exon

position:458418:1
position: 458418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458418-458550:1:exon

position:458550:1
position: 458550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:460057-460095:1:exon

position:460057:1
position: 460057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460095:1
position: 460095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:473958-474075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474260-474417:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:475344-475475:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478626-478808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:487756-488139:1:exon

LOC111055423
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111055423
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine-enriched protein isoform X4
translation: MLYQAPSPSRKKEPPPKENKLRLFLKRSSEPLLNLQNAAAQKGSYTQQLAPIQEPSSNQHFTLIVEEFEPDVFRQLIEYIHTGCVTLQPRTLLGVMNAADYYGLDALRHACAGFVQCCINVDTVCALLASAERYIQYKCTKSLVQKVLEFVDEHGNEVLNLGSFTLLPQHVVRLILAREELRADEFTKFQAALMWSKKYCDSNQNTVLKDVIGNFLEYIQFHKIPANVLMKEVHPLGLVPYSIIMNALAYQADPTSVEPSKLSPNRVRRSAQGRSMSVQSSLDPYGSNTTLSSSGSNQSSEMVSSDTTPHKTSTSN
SIO_010081: LOC111055423
subclass of: SO_0000673
so part of: LOC111055423
location: join(458428..458550,460057..460095,473958..474075,474260..474417,475344..475475,478626..478808,487756..487953)
location: region:458428-487953:1
so has part: feature:458428-458550:1:exon
so has part: feature:460057-460095:1:exon
so has part: feature:473958-474075:1:exon
so has part: feature:474260-474417:1:exon
so has part: feature:475344-475475:1:exon
so has part: feature:478626-478808:1:exon
so has part: feature:487756-487953:1:exon

XP_039296367.1
type: Protein
SIO_000068: ncbiprotein

position:458428:1
position: 458428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458428-458550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:460057-460095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:473958-474075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474260-474417:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:475344-475475:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478626-478808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:487756-487953:1:exon

LOC120354133
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354133
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(493059..494707)
location: region:493059-494707:-1
so has part: feature:493059-494707:-1:exon
subclass of: SO_0000011

120354133
type: Gene
SIO_000068: ncbigene

position:493059:-1
position: 493059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494707:-1
position: 494707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493059-494707:-1:exon

LOC120354133
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC120354133
product: uncharacterized LOC120354133
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 62% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XR_005572831.1
SIO_010081: LOC120354133
subclass of: SO_0000673
so part of: LOC120354133
location: complement(join(493059..493670,493862..494707))
location: region:493059-494707:-1
so has part: feature:493862-494707:-1:exon
so has part: feature:493059-493670:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:493862-494707:-1:exon

position:493862:-1
position: 493862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:493059-493670:-1:exon

position:493670:-1
position: 493670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354134
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354134
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(510175..>520800)
location: region:510175-520800:-1
so has part: feature:510175-520800:-1:exon
subclass of: SO_0000010

120354134
type: Gene
SIO_000068: ncbigene

position:510175:-1
position: 510175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520800:-1
position: 520800
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510175-520800:-1:exon

LOC120354134
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354134
product: uncharacterized LOC120354134
inference: similar to RNA sequence (same species):INSD:GAYF02018902.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 58 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_039440444.1
SIO_010081: LOC120354134
subclass of: SO_0000673
so part of: LOC120354134
location: complement(join(510175..510521,513838..514020,518938..519201,520556..>520800))
location: region:510175-520800:-1
so has part: feature:520556-520800:-1:exon
so has part: feature:518938-519201:-1:exon
so has part: feature:513838-514020:-1:exon
so has part: feature:510175-510521:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:520556-520800:-1:exon

position:520556:-1
position: 520556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:518938-519201:-1:exon

position:518938:-1
position: 518938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519201:-1
position: 519201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:513838-514020:-1:exon

position:513838:-1
position: 513838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514020:-1
position: 514020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:510175-510521:-1:exon

position:510521:-1
position: 510521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354134
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354134
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120354134
translation: MRSLLSGSAAAVTAEVEPPVAGDPADDVTADVTSSTSADVTSPAFRDPSLHRSTSTTSAGSSQHCYQLNRSNSSTGGGGSSQESKQQSVNEEGDEQSSLLLEGKKKKKRVEGEAEEEGEGEEKKDDSLLTKDPLSCKVILQEQKKDDDEAAFVCKVRRSESLEKRALKNADDLLAAGESKISRRSSDRALKRSDSLTKSEKTESNLYRRRQASQQQASKRKNGVGATSSSAGGGGGGGTNTRKCAIKRRHTVGGTKDLTWALDAVETGRSDSGSGAGGSEATYQHRRTSSPDLSRAARSACCTLVVAPWGGEGVGVTSPLESHV
SIO_010081: LOC120354134
subclass of: SO_0000673
so part of: LOC120354134
location: complement(join(510195..510521,513838..514020,518938..519201,520556..520756))
location: region:510195-520756:-1
so has part: feature:520556-520756:-1:exon
so has part: feature:518938-519201:-1:exon
so has part: feature:513838-514020:-1:exon
so has part: feature:510195-510521:-1:exon

XP_039296378.1
type: Protein
SIO_000068: ncbiprotein

position:510195:-1
position: 510195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520756:-1
position: 520756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520556-520756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:518938-519201:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:513838-514020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:510195-510521:-1:exon

LOC120354250
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354250
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 538688..542367
location: region:538688-542367:1
so has part: feature:538688-542367:1:exon
subclass of: SO_0000010

120354250
type: Gene
SIO_000068: ncbigene

position:538688:1
position: 538688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542367:1
position: 542367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538688-542367:1:exon

LOC120354250
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354250
product: extensin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_039441124.1
SIO_010081: LOC120354250
subclass of: SO_0000673
so part of: LOC120354250
location: join(538688..538703,541241..542367)
location: region:538688-542367:1
so has part: feature:538688-538703:1:exon
so has part: feature:541241-542367:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:538688-538703:1:exon

position:538703:1
position: 538703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:541241-542367:1:exon

position:541241:1
position: 541241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120354250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354250
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: extensin-like
translation: MLSQQIPLPPSRKAPQLSSSPPPQRPTTAPQPPLSPPPPQLTATKRPTTAPQPPSSPPPPQLTATKRPTTAPQLPLSPPPPQLTATKRPTTAPQPPLSPPPPQLTATKRPTTAPQPPLSPPPPQLTATKRPTTTPQPPLSPPPPQLTATKRPTTAPQPPLSPPPPQLTATKRPTTAPQPPLSPPPPQLTATKRPTTAPQPPLSPPPPQLTATKRPTTAPHPPLSPPPPQLTATKRPTTAPQPPLSPPPPQLTATKRPTTAPQPPLSPPPPQLTATKRPTTAPQPPSSPPPPQHHVLGHAVQDPTVLSTTKTDTPSHYMPASPLVSDENTSLGCHAMSAHAFPRSPPAVTTLQLTGQPLPRADPLHGQQRLSRHALHPHSG
SIO_010081: LOC120354250
subclass of: SO_0000673
so part of: LOC120354250
location: join(538688..538703,541241..542367)
location: region:538688-542367:1
so has part: feature:538688-538703:1:exon
so has part: feature:541241-542367:1:exon

XP_039297058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:538688-538703:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:541241-542367:1:exon

LOC111055427
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111055427
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 547973..597391
location: region:547973-597391:1
so has part: feature:547973-597391:1:exon
subclass of: SO_0000010

111055427
type: Gene
SIO_000068: ncbigene

position:547973:1
position: 547973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597391:1
position: 597391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547973-597391:1:exon

LOC111055427
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111055427
product: vigilin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2265 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_039440441.1
SIO_010081: LOC111055427
subclass of: SO_0000673
so part of: LOC111055427
location: join(547973..548016,548106..548179,554320..554625,557551..557784,560138..560344,561675..561890,563464..563653,565443..565640,566230..566480,568132..568291,569785..569948,570504..570635,573098..573226,576176..576334,577111..577245,579760..580011,580794..580947,581872..582003,583007..583200,585329..585439,586771..586980,591619..591837,594361..597391)
location: region:547973-597391:1
so has part: feature:547973-548016:1:exon
so has part: feature:548106-548179:1:exon
so has part: feature:554320-554625:1:exon
so has part: feature:557551-557784:1:exon
so has part: feature:560138-560344:1:exon
so has part: feature:561675-561890:1:exon
so has part: feature:563464-563653:1:exon
so has part: feature:565443-565640:1:exon
so has part: feature:566230-566480:1:exon
so has part: feature:568132-568291:1:exon
so has part: feature:569785-569948:1:exon
so has part: feature:570504-570635:1:exon
so has part: feature:573098-573226:1:exon
so has part: feature:576176-576334:1:exon
so has part: feature:577111-577245:1:exon
so has part: feature:579760-580011:1:exon
so has part: feature:580794-580947:1:exon
so has part: feature:581872-582003:1:exon
so has part: feature:583007-583200:1:exon
so has part: feature:585329-585439:1:exon
so has part: feature:586771-586980:1:exon
so has part: feature:591619-591837:1:exon
so has part: feature:594361-597391:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:547973-548016:1:exon

position:548016:1
position: 548016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:548106-548179:1:exon

position:548106:1
position: 548106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548179:1
position: 548179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:554320-554625:1:exon

position:554320:1
position: 554320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554625:1
position: 554625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:557551-557784:1:exon

position:557551:1
position: 557551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557784:1
position: 557784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:560138-560344:1:exon

position:560138:1
position: 560138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560344:1
position: 560344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:561675-561890:1:exon

position:561675:1
position: 561675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561890:1
position: 561890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:563464-563653:1:exon

position:563464:1
position: 563464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563653:1
position: 563653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:565443-565640:1:exon

position:565443:1
position: 565443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565640:1
position: 565640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:566230-566480:1:exon

position:566230:1
position: 566230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566480:1
position: 566480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:568132-568291:1:exon

position:568132:1
position: 568132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568291:1
position: 568291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:569785-569948:1:exon

position:569785:1
position: 569785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569948:1
position: 569948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:570504-570635:1:exon

position:570504:1
position: 570504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570635:1
position: 570635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:573098-573226:1:exon

position:573098:1
position: 573098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573226:1
position: 573226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:576176-576334:1:exon

position:576176:1
position: 576176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576334:1
position: 576334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:577111-577245:1:exon

position:577111:1
position: 577111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577245:1
position: 577245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:579760-580011:1:exon

position:579760:1
position: 579760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580011:1
position: 580011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:580794-580947:1:exon

position:580794:1
position: 580794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580947:1
position: 580947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:581872-582003:1:exon

position:581872:1
position: 581872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582003:1
position: 582003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:583007-583200:1:exon

position:583007:1
position: 583007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583200:1
position: 583200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:585329-585439:1:exon

position:585329:1
position: 585329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585439:1
position: 585439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:586771-586980:1:exon

position:586771:1
position: 586771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586980:1
position: 586980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:591619-591837:1:exon

position:591619:1
position: 591619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591837:1
position: 591837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:594361-597391:1:exon

position:594361:1
position: 594361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111055427
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111055427
product: vigilin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2261 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_039440440.1
SIO_010081: LOC111055427
subclass of: SO_0000673
so part of: LOC111055427
location: join(548017..548179,554320..554625,557551..557784,560138..560344,561675..561890,563464..563653,565443..565640,566230..566480,568132..568291,569785..569948,570504..570635,573098..573226,576176..576334,577111..577245,579760..580011,580794..580947,581872..582003,583007..583200,585329..585439,586771..586980,591619..591837,594361..597391)
location: region:548017-597391:1
so has part: feature:548017-548179:1:exon
so has part: feature:554320-554625:1:exon
so has part: feature:557551-557784:1:exon
so has part: feature:560138-560344:1:exon
so has part: feature:561675-561890:1:exon
so has part: feature:563464-563653:1:exon
so has part: feature:565443-565640:1:exon
so has part: feature:566230-566480:1:exon
so has part: feature:568132-568291:1:exon
so has part: feature:569785-569948:1:exon
so has part: feature:570504-570635:1:exon
so has part: feature:573098-573226:1:exon
so has part: feature:576176-576334:1:exon
so has part: feature:577111-577245:1:exon
so has part: feature:579760-580011:1:exon
so has part: feature:580794-580947:1:exon
so has part: feature:581872-582003:1:exon
so has part: feature:583007-583200:1:exon
so has part: feature:585329-585439:1:exon
so has part: feature:586771-586980:1:exon
so has part: feature:591619-591837:1:exon
so has part: feature:594361-597391:1:exon

position:548017:1
position: 548017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548017-548179:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:554320-554625:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:557551-557784:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560138-560344:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:561675-561890:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:563464-563653:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:565443-565640:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:566230-566480:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:568132-568291:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:569785-569948:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:570504-570635:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:573098-573226:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:576176-576334:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:577111-577245:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:579760-580011:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:580794-580947:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:581872-582003:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:583007-583200:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:585329-585439:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:586771-586980:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:591619-591837:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:594361-597391:1:exon

LOC111055427
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111055427
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vigilin
translation: MMMMTTSNDQQQQQVTAERETAEQQLAASPSNEYSHNNNNYNDCFPALPVQGGGVGGQGGAPASGQAGWNNTVRVGSRETTIIVKVPAEERPRNLTKSDQNGSSFGEKESIRMCKQISKDTNTLLEMNVSRDQSATFLITGKHQNIAEAKRLILQSFQAQAQDSIEVPKQYHRLILGKQATRLKELEKESGATIKVPSAADASQLIQVTGPKEAIRRAIQLIKQISDEQSRKAMERIIVPRTYWPFFCGHQNSRLTELMADTKTKISLAPPSTGIDEIAITGDKEGVQAAKDHIMAVYNEMKEKSTTVSVEVAKSQHRYVIGSKGSGLAEIHEKTGVLVEMPPLDSDNQSTTIVLRGPQEKLGPALTMVYEKANSVVEQYLDVPYWIHRHLIGKKGADILKMKEDCPKVYVDFGEKNKDRQEKDNRIRIEGPLEEVRLMKEKLQSKADALQAEMSEKEMEVPTAYFKYIIGKNGANINRIKELTDANISINRSGQNPNSILIEGTKVAVAEAERELKEIISKLDDEREEEMVIDSRLHSVIIGQKGEQIREIREKFNNQVNVTFPSPNEKSDIVRVRGPKAEVDKCCRYLRSLVDARYTLDVPVFKQYHKLVIGKGGANIKKIKEDTNTKIVLPAEDSKSDVIVISGKKENVEQARDMVLKIQEEQANIVTESVLVPMCSVQGRSRLVLSIGEECAVMVKLPAQNSGDQVVVRGPKDDVEKAVQLLKQLANDLRQSSHTQTMKVKSQHHRVIIGKQGATIKRLRESTGCHIILPSEQDADQELITLIGKKENVEKAKLELQAIVKDIDNVIEDSVDIDPRHHKAFMQGGRSEGGAKPATLVNRIQEQAGGSVRISFPPRGAQSRVTIKGPPDQVRAAKEALLEAVDDFDNQVTIECVIPWRYHKQVMGVRGVKVGDITATYNVHIKFPDNRERYANARDQHNDNLEQSQNGGGEEQGGDQLVNGSAAEAEEVDPDAVRPEDIVLITGRAEKCELAKQALLDSVPVTEQMEVPFDYHRAIIGAKGQTIRELSQRFDVQISVPPSHQRADTIQVSGSPANVALAKEAIQDKMLEVDADNEDRKKKSFEVKLTVSQEYFPKIIGKKGAVVNKIREDHQVQIILPARGGGESGGDQDTITIVGYQERAEAARDEIQRIVDQLDSMIREEVSVDARIHPRLIGTRGRSIRQLMSQFQVEVKFAKASDPDPNIVVIAGQQDNVDNARERLLELAEDYMQDIDEYEFEQSFRPSHTTEGTNPFDSLNFNSNQAADTSNTTTAGTTNSPPPGGQGHHNTSNHHEGGGGGGFVVKGAPWEQKAPDTASTADFPSFGGAAPSHGGSQVSWGPRR
SIO_010081: LOC111055427
subclass of: SO_0000673
so part of: LOC111055427
location: join(554380..554625,557551..557784,560138..560344,561675..561890,563464..563653,565443..565640,566230..566480,568132..568291,569785..569948,570504..570635,573098..573226,576176..576334,577111..577245,579760..580011,580794..580947,581872..582003,583007..583200,585329..585439,586771..586980,591619..591837,594361..594702)
location: region:554380-594702:1
so has part: feature:554380-554625:1:exon
so has part: feature:557551-557784:1:exon
so has part: feature:560138-560344:1:exon
so has part: feature:561675-561890:1:exon
so has part: feature:563464-563653:1:exon
so has part: feature:565443-565640:1:exon
so has part: feature:566230-566480:1:exon
so has part: feature:568132-568291:1:exon
so has part: feature:569785-569948:1:exon
so has part: feature:570504-570635:1:exon
so has part: feature:573098-573226:1:exon
so has part: feature:576176-576334:1:exon
so has part: feature:577111-577245:1:exon
so has part: feature:579760-580011:1:exon
so has part: feature:580794-580947:1:exon
so has part: feature:581872-582003:1:exon
so has part: feature:583007-583200:1:exon
so has part: feature:585329-585439:1:exon
so has part: feature:586771-586980:1:exon
so has part: feature:591619-591837:1:exon
so has part: feature:594361-594702:1:exon

XP_039296374.1
type: Protein
SIO_000068: ncbiprotein

position:554380:1
position: 554380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594702:1
position: 594702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554380-554625:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:557551-557784:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560138-560344:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:561675-561890:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563464-563653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:565443-565640:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:566230-566480:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:568132-568291:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:569785-569948:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:570504-570635:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:573098-573226:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:576176-576334:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:577111-577245:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:579760-580011:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:580794-580947:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:581872-582003:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:583007-583200:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:585329-585439:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:586771-586980:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:591619-591837:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:594361-594702:1:exon

LOC111055427
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111055427
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vigilin
translation: MMMMTTSNDQQQQQVTAERETAEQQLAASPSNEYSHNNNNYNDCFPALPVQGGGVGGQGGAPASGQAGWNNTVRVGSRETTIIVKVPAEERPRNLTKSDQNGSSFGEKESIRMCKQISKDTNTLLEMNVSRDQSATFLITGKHQNIAEAKRLILQSFQAQAQDSIEVPKQYHRLILGKQATRLKELEKESGATIKVPSAADASQLIQVTGPKEAIRRAIQLIKQISDEQSRKAMERIIVPRTYWPFFCGHQNSRLTELMADTKTKISLAPPSTGIDEIAITGDKEGVQAAKDHIMAVYNEMKEKSTTVSVEVAKSQHRYVIGSKGSGLAEIHEKTGVLVEMPPLDSDNQSTTIVLRGPQEKLGPALTMVYEKANSVVEQYLDVPYWIHRHLIGKKGADILKMKEDCPKVYVDFGEKNKDRQEKDNRIRIEGPLEEVRLMKEKLQSKADALQAEMSEKEMEVPTAYFKYIIGKNGANINRIKELTDANISINRSGQNPNSILIEGTKVAVAEAERELKEIISKLDDEREEEMVIDSRLHSVIIGQKGEQIREIREKFNNQVNVTFPSPNEKSDIVRVRGPKAEVDKCCRYLRSLVDARYTLDVPVFKQYHKLVIGKGGANIKKIKEDTNTKIVLPAEDSKSDVIVISGKKENVEQARDMVLKIQEEQANIVTESVLVPMCSVQGRSRLVLSIGEECAVMVKLPAQNSGDQVVVRGPKDDVEKAVQLLKQLANDLRQSSHTQTMKVKSQHHRVIIGKQGATIKRLRESTGCHIILPSEQDADQELITLIGKKENVEKAKLELQAIVKDIDNVIEDSVDIDPRHHKAFMQGGRSEGGAKPATLVNRIQEQAGGSVRISFPPRGAQSRVTIKGPPDQVRAAKEALLEAVDDFDNQVTIECVIPWRYHKQVMGVRGVKVGDITATYNVHIKFPDNRERYANARDQHNDNLEQSQNGGGEEQGGDQLVNGSAAEAEEVDPDAVRPEDIVLITGRAEKCELAKQALLDSVPVTEQMEVPFDYHRAIIGAKGQTIRELSQRFDVQISVPPSHQRADTIQVSGSPANVALAKEAIQDKMLEVDADNEDRKKKSFEVKLTVSQEYFPKIIGKKGAVVNKIREDHQVQIILPARGGGESGGDQDTITIVGYQERAEAARDEIQRIVDQLDSMIREEVSVDARIHPRLIGTRGRSIRQLMSQFQVEVKFAKASDPDPNIVVIAGQQDNVDNARERLLELAEDYMQDIDEYEFEQSFRPSHTTEGTNPFDSLNFNSNQAADTSNTTTAGTTNSPPPGGQGHHNTSNHHEGGGGGGFVVKGAPWEQKAPDTASTADFPSFGGAAPSHGGSQVSWGPRR
SIO_010081: LOC111055427
subclass of: SO_0000673
so part of: LOC111055427
location: join(554380..554625,557551..557784,560138..560344,561675..561890,563464..563653,565443..565640,566230..566480,568132..568291,569785..569948,570504..570635,573098..573226,576176..576334,577111..577245,579760..580011,580794..580947,581872..582003,583007..583200,585329..585439,586771..586980,591619..591837,594361..594702)
location: region:554380-594702:1
so has part: feature:554380-554625:1:exon
so has part: feature:557551-557784:1:exon
so has part: feature:560138-560344:1:exon
so has part: feature:561675-561890:1:exon
so has part: feature:563464-563653:1:exon
so has part: feature:565443-565640:1:exon
so has part: feature:566230-566480:1:exon
so has part: feature:568132-568291:1:exon
so has part: feature:569785-569948:1:exon
so has part: feature:570504-570635:1:exon
so has part: feature:573098-573226:1:exon
so has part: feature:576176-576334:1:exon
so has part: feature:577111-577245:1:exon
so has part: feature:579760-580011:1:exon
so has part: feature:580794-580947:1:exon
so has part: feature:581872-582003:1:exon
so has part: feature:583007-583200:1:exon
so has part: feature:585329-585439:1:exon
so has part: feature:586771-586980:1:exon
so has part: feature:591619-591837:1:exon
so has part: feature:594361-594702:1:exon

XP_039296375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:554380-554625:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:557551-557784:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560138-560344:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:561675-561890:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563464-563653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:565443-565640:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:566230-566480:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:568132-568291:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:569785-569948:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:570504-570635:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:573098-573226:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:576176-576334:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:577111-577245:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:579760-580011:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:580794-580947:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:581872-582003:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:583007-583200:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:585329-585439:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:586771-586980:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:591619-591837:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:594361-594702:1:exon

LOC111055426
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111055426
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 598339..685466
location: region:598339-685466:1
so has part: feature:598339-685466:1:exon
subclass of: SO_0000010

111055426
type: Gene
SIO_000068: ncbigene

position:598339:1
position: 598339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685466:1
position: 685466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598339-685466:1:exon

LOC111055426
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111055426
product: rho GTPase-activating protein 21-B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 17 long SRA reads, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_039440436.1
SIO_010081: LOC111055426
subclass of: SO_0000673
so part of: LOC111055426
location: join(598339..598558,599469..599544,602432..602593,605334..605573,608829..609021,611113..611308,611762..611904,614261..614440,616209..616388,618386..618487,622125..622286,624585..624785,626396..626449,627494..627593,630973..631204,646290..646617,650051..650319,652122..652253,654526..654720,657761..657979,662133..662298,664354..664647,666440..666590,669380..669492,674391..674635,676028..676300,680877..681059,684991..685466)
location: region:598339-685466:1
so has part: feature:598339-598558:1:exon
so has part: feature:599469-599544:1:exon
so has part: feature:602432-602593:1:exon
so has part: feature:605334-605573:1:exon
so has part: feature:608829-609021:1:exon
so has part: feature:611113-611308:1:exon
so has part: feature:611762-611904:1:exon
so has part: feature:614261-614440:1:exon
so has part: feature:616209-616388:1:exon
so has part: feature:618386-618487:1:exon
so has part: feature:622125-622286:1:exon
so has part: feature:624585-624785:1:exon
so has part: feature:626396-626449:1:exon
so has part: feature:627494-627593:1:exon
so has part: feature:630973-631204:1:exon
so has part: feature:646290-646617:1:exon
so has part: feature:650051-650319:1:exon
so has part: feature:652122-652253:1:exon
so has part: feature:654526-654720:1:exon
so has part: feature:657761-657979:1:exon
so has part: feature:662133-662298:1:exon
so has part: feature:664354-664647:1:exon
so has part: feature:666440-666590:1:exon
so has part: feature:669380-669492:1:exon
so has part: feature:674391-674635:1:exon
so has part: feature:676028-676300:1:exon
so has part: feature:680877-681059:1:exon
so has part: feature:684991-685466:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:598339-598558:1:exon

position:598558:1
position: 598558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:599469-599544:1:exon

position:599469:1
position: 599469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599544:1
position: 599544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:602432-602593:1:exon

position:602432:1
position: 602432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602593:1
position: 602593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:605334-605573:1:exon

position:605334:1
position: 605334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605573:1
position: 605573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:608829-609021:1:exon

position:608829:1
position: 608829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609021:1
position: 609021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:611113-611308:1:exon

position:611113:1
position: 611113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611308:1
position: 611308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:611762-611904:1:exon

position:611762:1
position: 611762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611904:1
position: 611904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:614261-614440:1:exon

position:614261:1
position: 614261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614440:1
position: 614440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:616209-616388:1:exon

position:616209:1
position: 616209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616388:1
position: 616388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:618386-618487:1:exon

position:618386:1
position: 618386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618487:1
position: 618487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:622125-622286:1:exon

position:622125:1
position: 622125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622286:1
position: 622286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:624585-624785:1:exon

position:624585:1
position: 624585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624785:1
position: 624785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:626396-626449:1:exon

position:626396:1
position: 626396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626449:1
position: 626449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:627494-627593:1:exon

position:627494:1
position: 627494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627593:1
position: 627593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:630973-631204:1:exon

position:630973:1
position: 630973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631204:1
position: 631204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:646290-646617:1:exon

position:646290:1
position: 646290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646617:1
position: 646617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:650051-650319:1:exon

position:650051:1
position: 650051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650319:1
position: 650319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:652122-652253:1:exon

position:652122:1
position: 652122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652253:1
position: 652253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:654526-654720:1:exon

position:654526:1
position: 654526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654720:1
position: 654720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:657761-657979:1:exon

position:657761:1
position: 657761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657979:1
position: 657979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:662133-662298:1:exon

position:662133:1
position: 662133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662298:1
position: 662298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:664354-664647:1:exon

position:664354:1
position: 664354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664647:1
position: 664647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:666440-666590:1:exon

position:666440:1
position: 666440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666590:1
position: 666590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:669380-669492:1:exon

position:669380:1
position: 669380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669492:1
position: 669492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:674391-674635:1:exon

position:674391:1
position: 674391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674635:1
position: 674635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:676028-676300:1:exon

position:676028:1
position: 676028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676300:1
position: 676300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:680877-681059:1:exon

position:680877:1
position: 680877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681059:1
position: 681059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:684991-685466:1:exon

position:684991:1
position: 684991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111055426
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111055426
product: rho GTPase-activating protein 21-B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 18 long SRA reads, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_039440435.1
SIO_010081: LOC111055426
subclass of: SO_0000673
so part of: LOC111055426
location: join(598339..598558,599469..599544,602432..602593,605334..605573,608829..609021,611113..611308,611762..611904,614261..614440,616209..616388,618386..618487,622125..622286,624585..624785,626396..626449,627494..627589,627817..627823,630973..631204,646290..646617,650051..650319,652122..652253,654526..654720,657761..657979,662133..662298,664354..664647,666440..666590,669380..669492,674391..674635,676028..676300,680877..681059,684991..685466)
location: region:598339-685466:1
so has part: feature:598339-598558:1:exon
so has part: feature:599469-599544:1:exon
so has part: feature:602432-602593:1:exon
so has part: feature:605334-605573:1:exon
so has part: feature:608829-609021:1:exon
so has part: feature:611113-611308:1:exon
so has part: feature:611762-611904:1:exon
so has part: feature:614261-614440:1:exon
so has part: feature:616209-616388:1:exon
so has part: feature:618386-618487:1:exon
so has part: feature:622125-622286:1:exon
so has part: feature:624585-624785:1:exon
so has part: feature:626396-626449:1:exon
so has part: feature:627494-627589:1:exon
so has part: feature:627817-627823:1:exon
so has part: feature:630973-631204:1:exon
so has part: feature:646290-646617:1:exon
so has part: feature:650051-650319:1:exon
so has part: feature:652122-652253:1:exon
so has part: feature:654526-654720:1:exon
so has part: feature:657761-657979:1:exon
so has part: feature:662133-662298:1:exon
so has part: feature:664354-664647:1:exon
so has part: feature:666440-666590:1:exon
so has part: feature:669380-669492:1:exon
so has part: feature:674391-674635:1:exon
so has part: feature:676028-676300:1:exon
so has part: feature:680877-681059:1:exon
so has part: feature:684991-685466:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:598339-598558:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:599469-599544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:602432-602593:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:605334-605573:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608829-609021:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:611113-611308:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:611762-611904:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:614261-614440:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:616209-616388:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:618386-618487:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:622125-622286:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:624585-624785:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:626396-626449:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:627494-627589:1:exon

position:627589:1
position: 627589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:627817-627823:1:exon

position:627817:1
position: 627817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627823:1
position: 627823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:630973-631204:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:646290-646617:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:650051-650319:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:652122-652253:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:654526-654720:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:657761-657979:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:662133-662298:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:664354-664647:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:666440-666590:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:669380-669492:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:674391-674635:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:676028-676300:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:680877-681059:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:684991-685466:1:exon

LOC111055426
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111055426
product: rho GTPase-activating protein 21-B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 17 long SRA reads, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_039440439.1
SIO_010081: LOC111055426
subclass of: SO_0000673
so part of: LOC111055426
location: join(598339..598558,599469..599544,602432..602593,605334..605573,608829..609021,611113..611308,611762..611904,614261..614440,616209..616388,618386..618487,622125..622286,626396..626449,627494..627593,630973..631204,646290..646617,650051..650319,652122..652253,654526..654720,657761..657979,662133..662298,664354..664647,666440..666590,669380..669492,674391..674635,676028..676300,680877..681059,684991..685466)
location: region:598339-685466:1
so has part: feature:598339-598558:1:exon
so has part: feature:599469-599544:1:exon
so has part: feature:602432-602593:1:exon
so has part: feature:605334-605573:1:exon
so has part: feature:608829-609021:1:exon
so has part: feature:611113-611308:1:exon
so has part: feature:611762-611904:1:exon
so has part: feature:614261-614440:1:exon
so has part: feature:616209-616388:1:exon
so has part: feature:618386-618487:1:exon
so has part: feature:622125-622286:1:exon
so has part: feature:626396-626449:1:exon
so has part: feature:627494-627593:1:exon
so has part: feature:630973-631204:1:exon
so has part: feature:646290-646617:1:exon
so has part: feature:650051-650319:1:exon
so has part: feature:652122-652253:1:exon
so has part: feature:654526-654720:1:exon
so has part: feature:657761-657979:1:exon
so has part: feature:662133-662298:1:exon
so has part: feature:664354-664647:1:exon
so has part: feature:666440-666590:1:exon
so has part: feature:669380-669492:1:exon
so has part: feature:674391-674635:1:exon
so has part: feature:676028-676300:1:exon
so has part: feature:680877-681059:1:exon
so has part: feature:684991-685466:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:598339-598558:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:599469-599544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:602432-602593:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:605334-605573:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608829-609021:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:611113-611308:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:611762-611904:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:614261-614440:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:616209-616388:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:618386-618487:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:622125-622286:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:626396-626449:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:627494-627593:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:630973-631204:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:646290-646617:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:650051-650319:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:652122-652253:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:654526-654720:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:657761-657979:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:662133-662298:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:664354-664647:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:666440-666590:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:669380-669492:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:674391-674635:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:676028-676300:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:680877-681059:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:684991-685466:1:exon

LOC111055426
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111055426
product: rho GTPase-activating protein 21-B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 16 long SRA reads, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_039440438.1
SIO_010081: LOC111055426
subclass of: SO_0000673
so part of: LOC111055426
location: join(598339..598558,599469..599544,602432..602593,605334..605573,608829..609021,611113..611308,611762..611904,614261..614440,616209..616388,618386..618487,622125..622286,626396..626449,627494..627589,627817..627823,630973..631204,646290..646617,650051..650319,652122..652253,654526..654720,657761..657979,662133..662298,664354..664647,666440..666590,669380..669492,674391..674635,676028..676300,680877..681059,684991..685466)
location: region:598339-685466:1
so has part: feature:598339-598558:1:exon
so has part: feature:599469-599544:1:exon
so has part: feature:602432-602593:1:exon
so has part: feature:605334-605573:1:exon
so has part: feature:608829-609021:1:exon
so has part: feature:611113-611308:1:exon
so has part: feature:611762-611904:1:exon
so has part: feature:614261-614440:1:exon
so has part: feature:616209-616388:1:exon
so has part: feature:618386-618487:1:exon
so has part: feature:622125-622286:1:exon
so has part: feature:626396-626449:1:exon
so has part: feature:627494-627589:1:exon
so has part: feature:627817-627823:1:exon
so has part: feature:630973-631204:1:exon
so has part: feature:646290-646617:1:exon
so has part: feature:650051-650319:1:exon
so has part: feature:652122-652253:1:exon
so has part: feature:654526-654720:1:exon
so has part: feature:657761-657979:1:exon
so has part: feature:662133-662298:1:exon
so has part: feature:664354-664647:1:exon
so has part: feature:666440-666590:1:exon
so has part: feature:669380-669492:1:exon
so has part: feature:674391-674635:1:exon
so has part: feature:676028-676300:1:exon
so has part: feature:680877-681059:1:exon
so has part: feature:684991-685466:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:598339-598558:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:599469-599544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:602432-602593:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:605334-605573:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608829-609021:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:611113-611308:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:611762-611904:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:614261-614440:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:616209-616388:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:618386-618487:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:622125-622286:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:626396-626449:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:627494-627589:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:627817-627823:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:630973-631204:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:646290-646617:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:650051-650319:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:652122-652253:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:654526-654720:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:657761-657979:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:662133-662298:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:664354-664647:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:666440-666590:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:669380-669492:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:674391-674635:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:676028-676300:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:680877-681059:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:684991-685466:1:exon

LOC111055426
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111055426
product: rho GTPase-activating protein 21-B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 18 long SRA reads, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_039440437.1
SIO_010081: LOC111055426
subclass of: SO_0000673
so part of: LOC111055426
location: join(598339..598558,599469..599544,602432..602593,605334..605573,608829..609021,611113..611308,611762..611904,614264..614440,616209..616388,618386..618487,622125..622286,624585..624785,626396..626449,627494..627589,627817..627823,630973..631204,646290..646617,650051..650319,652122..652253,654526..654720,657761..657979,662133..662298,664354..664647,666440..666590,669380..669492,674391..674635,676028..676300,680877..681059,684991..685466)
location: region:598339-685466:1
so has part: feature:598339-598558:1:exon
so has part: feature:599469-599544:1:exon
so has part: feature:602432-602593:1:exon
so has part: feature:605334-605573:1:exon
so has part: feature:608829-609021:1:exon
so has part: feature:611113-611308:1:exon
so has part: feature:611762-611904:1:exon
so has part: feature:614264-614440:1:exon
so has part: feature:616209-616388:1:exon
so has part: feature:618386-618487:1:exon
so has part: feature:622125-622286:1:exon
so has part: feature:624585-624785:1:exon
so has part: feature:626396-626449:1:exon
so has part: feature:627494-627589:1:exon
so has part: feature:627817-627823:1:exon
so has part: feature:630973-631204:1:exon
so has part: feature:646290-646617:1:exon
so has part: feature:650051-650319:1:exon
so has part: feature:652122-652253:1:exon
so has part: feature:654526-654720:1:exon
so has part: feature:657761-657979:1:exon
so has part: feature:662133-662298:1:exon
so has part: feature:664354-664647:1:exon
so has part: feature:666440-666590:1:exon
so has part: feature:669380-669492:1:exon
so has part: feature:674391-674635:1:exon
so has part: feature:676028-676300:1:exon
so has part: feature:680877-681059:1:exon
so has part: feature:684991-685466:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:598339-598558:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:599469-599544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:602432-602593:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:605334-605573:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608829-609021:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:611113-611308:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:611762-611904:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:614264-614440:1:exon

position:614264:1
position: 614264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:616209-616388:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:618386-618487:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:622125-622286:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:624585-624785:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:626396-626449:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:627494-627589:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:627817-627823:1:exon

urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
SIO_000628: feature:646290-646617:1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:652122-652253:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:654526-654720:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:657761-657979:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:662133-662298:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:664354-664647:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:666440-666590:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:669380-669492:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:674391-674635:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:676028-676300:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:680877-681059:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:684991-685466:1:exon

LOC111055426
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 108931
gene: LOC111055426
product: rho GTPase-activating protein 21-B, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 9 long SRA reads, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005572832.1
SIO_010081: LOC111055426
so part of: LOC111055426
location: join(598339..598558,599469..599544,602432..602593,605334..605573,608829..609021,611113..611308,611762..611904,614261..614440,616209..616388,618386..618487,622125..622286,624585..624785,626396..626449,627494..627589,627817..627823,630973..631204,646290..646617,650051..650319,652122..652253,654526..654720,657761..657979,662133..662298,664354..664647,666440..666590,669380..669492,671325..671441,674391..674528)
location: region:598339-674528:1
so has part: feature:598339-598558:1:exon
so has part: feature:599469-599544:1:exon
so has part: feature:602432-602593:1:exon
so has part: feature:605334-605573:1:exon
so has part: feature:608829-609021:1:exon
so has part: feature:611113-611308:1:exon
so has part: feature:611762-611904:1:exon
so has part: feature:614261-614440:1:exon
so has part: feature:616209-616388:1:exon
so has part: feature:618386-618487:1:exon
so has part: feature:622125-622286:1:exon
so has part: feature:624585-624785:1:exon
so has part: feature:626396-626449:1:exon
so has part: feature:627494-627589:1:exon
so has part: feature:627817-627823:1:exon
so has part: feature:630973-631204:1:exon
so has part: feature:646290-646617:1:exon
so has part: feature:650051-650319:1:exon
so has part: feature:652122-652253:1:exon
so has part: feature:654526-654720:1:exon
so has part: feature:657761-657979:1:exon
so has part: feature:662133-662298:1:exon
so has part: feature:664354-664647:1:exon
so has part: feature:666440-666590:1:exon
so has part: feature:669380-669492:1:exon
so has part: feature:671325-671441:1:exon
so has part: feature:674391-674528:1:exon

position:674528:1
position: 674528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598339-598558:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:599469-599544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:602432-602593:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:605334-605573:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608829-609021:1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:614261-614440:1:exon

urn:…
SIO_000300: 9
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urn:…
SIO_000300: 10
SIO_000628: feature:618386-618487:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:622125-622286:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:624585-624785:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:626396-626449:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:627494-627589:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:627817-627823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:630973-631204:1:exon

urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
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urn:…
SIO_000300: 19
SIO_000628: feature:652122-652253:1:exon

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SIO_000300: 20
SIO_000628: feature:654526-654720:1:exon

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SIO_000300: 21
SIO_000628: feature:657761-657979:1:exon

urn:…
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urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
SIO_000628: feature:666440-666590:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:669380-669492:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:671325-671441:1:exon

position:671325:1
position: 671325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671441:1
position: 671441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:674391-674528:1:exon

LOC111055426
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111055426
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 21-B isoform X2
translation: MSEEDSSSASGNACSTSPSVQQQLNSEVWRGLTSGGAGGVGSRSGGGPRSLLLKRSENGFGFTLRHFIVYPPESYTVLVPGCRSGCEPMDTMFVKSVRPNSPAACAGLQTGDRVVSVNGQTVTGSLTYAHVVHMISQSPKHLHLLVVPRHDDLLQLYFGDTAHNPETNPRVRLRSPSSGGSASPSRRPPLLSHHQSVPPLTPPLLSHHHHHSSRLLAVNPGGGRECSSLSLEAGVGGGGGNQEWRRASDGGGGGEKDGDSCSASSSLDSMSRADFHSSDDSLIIDRIRKSFEQKEEFLRGGVTQPSASPSNPPIQWPAAIPASCVIKPSTTEQAVPWRTKPAAVSPRCKGLTRIDESGSSSMSMSSCSSSALGGALVPVATRAQVFEEGAGLTGVQLFRSELAGLSEKRSAPDVALRRRQFETQGITSRTQDGGGPVPSAANQDKRAGISRSLDMGCAMSGNRTTPVGGSRLHCEPPVQRQSPTSNQGLATSNSSSSIGSEWGGGGTSSSPPPVSQRHKAVRQDSYLAACHKPQTTQAASSEVAADSAAAVTADSENEKQQLEKKKQKKKKLKSSSLRSAVRPSRLDLAKVARPLSCGGTPPPSPLSQDAKDDLIKQSPTDDQQNTDVDQSHQKRVSYLKQIWTENANRTSPTPPSSSHLNERLKKKKKREDGEAAAEQDEGPLVVVEGSLMCSVLDTASSGTANRRVALSSSQQWNPVWAILRGPVLHLMRLKQAETPGLSSPLGTDQLACREEWWSQDLCARGVIIQQCVVDPSSTAPATATKRGANTRHVISVQVPPQSADHQPQPADQLLLQAADVCSHEQWLRALHNVVDKPAPRGEGRKNSEDCQPAGQSSQTPQVQVQQQQQQLASPKCKTWKGRVAKQFRRIGQAGSGGGGTREGGSSPISPTAGPPQASASYQEGASIGVPLDWCPQSANHDGVPLLVDVCCGEVEGRGLEVVGVYRVPGNTAAVTNLTEQVNKASGGDVIAGLVAQADVNVVSSLLKSLFRRLPDALLTSDLYPLFIAADKIPDPLLRAATIRKLVHSLPDHHFETLRFVMAHLKRVVARSEVNKMEARNLAIVFGPTLVRTSDDDSMLTLVTDMSHQCRIVETLILHADWCFSDDDIDRLQLASGGGGGSVSGDGPSLPPGPTVDHITDNHSLLLENIHKVQGMKSGIGEVGGGGGSNMKEISAKDIVVSIIGAANRKMHKSKSRSGCGTSSSKLQQQTSEVDGGGGSRGVAASIRESVLFSGSILAASSTASVKHQRKHDGVEERRGSGGSGQEQSGGGDGGSSNAAVDADGMIRTYTGLSACKQERIRRFEQETKAMLQRVGATAVEDRPKREFDFSANQDESPPSGEDLLSSLTSTFDAKMRSLLSGSAAAVTAEVEPPVAGDPADDVTADVTSSTSADVTSPAFRDPSLHRSTSTTSAGSSQHCYQLNRSNSSTGGGGSSQESKQQSVNEEGDEGDEQSSLSLEGKKKKKRVEGEAEEEGEGEEKKDDSVLTKDPLSCKVILQEQKKDDDEAAFVCKVRRSESLEKRALKNADDLLAAGESKISRRSSDRALKRSDSLTKSEKTESNLYRRRQASQQQASKRKNGVGATSSSAGGGGGGGTNTRKCAIKRRHTVGGTKDLTWALDAVETGRSDSGSGAGGSEATYQHRRTSSPDLSRAARSACCTLVVAPWGGEGVGVTSPLESHV
SIO_010081: LOC111055426
subclass of: SO_0000673
so part of: LOC111055426
location: join(599479..599544,602432..602593,605334..605573,608829..609021,611113..611308,611762..611904,614261..614440,616209..616388,618386..618487,622125..622286,624585..624785,626396..626449,627494..627593,630973..631204,646290..646617,650051..650319,652122..652253,654526..654720,657761..657979,662133..662298,664354..664647,666440..666590,669380..669492,674391..674635,676028..676300,680877..681059,684991..685317)
location: region:599479-685317:1
so has part: feature:599479-599544:1:exon
so has part: feature:602432-602593:1:exon
so has part: feature:605334-605573:1:exon
so has part: feature:608829-609021:1:exon
so has part: feature:611113-611308:1:exon
so has part: feature:611762-611904:1:exon
so has part: feature:614261-614440:1:exon
so has part: feature:616209-616388:1:exon
so has part: feature:618386-618487:1:exon
so has part: feature:622125-622286:1:exon
so has part: feature:624585-624785:1:exon
so has part: feature:626396-626449:1:exon
so has part: feature:627494-627593:1:exon
so has part: feature:630973-631204:1:exon
so has part: feature:646290-646617:1:exon
so has part: feature:650051-650319:1:exon
so has part: feature:652122-652253:1:exon
so has part: feature:654526-654720:1:exon
so has part: feature:657761-657979:1:exon
so has part: feature:662133-662298:1:exon
so has part: feature:664354-664647:1:exon
so has part: feature:666440-666590:1:exon
so has part: feature:669380-669492:1:exon
so has part: feature:674391-674635:1:exon
so has part: feature:676028-676300:1:exon
so has part: feature:680877-681059:1:exon
so has part: feature:684991-685317:1:exon

XP_039296370.1
type: Protein
SIO_000068: ncbiprotein

position:599479:1
position: 599479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685317:1
position: 685317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599479-599544:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:602432-602593:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:605334-605573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608829-609021:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:611113-611308:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:611762-611904:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:614261-614440:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:616209-616388:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:618386-618487:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:622125-622286:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:624585-624785:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:626396-626449:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:627494-627593:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:630973-631204:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:646290-646617:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:650051-650319:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:652122-652253:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:654526-654720:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:657761-657979:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:662133-662298:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:664354-664647:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:666440-666590:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:669380-669492:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:674391-674635:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:676028-676300:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:680877-681059:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:684991-685317:1:exon

LOC111055426
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111055426
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 21-B isoform X1
translation: MSEEDSSSASGNACSTSPSVQQQLNSEVWRGLTSGGAGGVGSRSGGGPRSLLLKRSENGFGFTLRHFIVYPPESYTVLVPGCRSGCEPMDTMFVKSVRPNSPAACAGLQTGDRVVSVNGQTVTGSLTYAHVVHMISQSPKHLHLLVVPRHDDLLQLYFGDTAHNPETNPRVRLRSPSSGGSASPSRRPPLLSHHQSVPPLTPPLLSHHHHHSSRLLAVNPGGGRECSSLSLEAGVGGGGGNQEWRRASDGGGGGEKDGDSCSASSSLDSMSRADFHSSDDSLIIDRIRKSFEQKEEFLRGGVTQPSASPSNPPIQWPAAIPASCVIKPSTTEQAVPWRTKPAAVSPRCKGLTRIDESGSSSMSMSSCSSSALGGALVPVATRAQVFEEGAGLTGVQLFRSELAGLSEKRSAPDVALRRRQFETQGITSRTQDGGGPVPSAANQDKRAGISRSLDMGCAMSGNRTTPVGGSRLHCEPPVQRQSPTSNQGLATSNSSSSIGSEWGGGGTSSSPPPVSQRHKAVRQDSYLAACHKPQTTQAASSEVAADSAAAVTADSENEKQQLEKKKQKKKKLKSSSLRSAVRPSRLDLAKVARPLSCGGTPPPSPLSQDAKDDLIKQSPTDDQQNTDVDQSHQKRVSYLKQIWTENANRTSPTPPSSSQLLNERLKKKKKREDGEAAAEQDEGPLVVVEGSLMCSVLDTASSGTANRRVALSSSQQWNPVWAILRGPVLHLMRLKQAETPGLSSPLGTDQLACREEWWSQDLCARGVIIQQCVVDPSSTAPATATKRGANTRHVISVQVPPQSADHQPQPADQLLLQAADVCSHEQWLRALHNVVDKPAPRGEGRKNSEDCQPAGQSSQTPQVQVQQQQQQLASPKCKTWKGRVAKQFRRIGQAGSGGGGTREGGSSPISPTAGPPQASASYQEGASIGVPLDWCPQSANHDGVPLLVDVCCGEVEGRGLEVVGVYRVPGNTAAVTNLTEQVNKASGGDVIAGLVAQADVNVVSSLLKSLFRRLPDALLTSDLYPLFIAADKIPDPLLRAATIRKLVHSLPDHHFETLRFVMAHLKRVVARSEVNKMEARNLAIVFGPTLVRTSDDDSMLTLVTDMSHQCRIVETLILHADWCFSDDDIDRLQLASGGGGGSVSGDGPSLPPGPTVDHITDNHSLLLENIHKVQGMKSGIGEVGGGGGSNMKEISAKDIVVSIIGAANRKMHKSKSRSGCGTSSSKLQQQTSEVDGGGGSRGVAASIRESVLFSGSILAASSTASVKHQRKHDGVEERRGSGGSGQEQSGGGDGGSSNAAVDADGMIRTYTGLSACKQERIRRFEQETKAMLQRVGATAVEDRPKREFDFSANQDESPPSGEDLLSSLTSTFDAKMRSLLSGSAAAVTAEVEPPVAGDPADDVTADVTSSTSADVTSPAFRDPSLHRSTSTTSAGSSQHCYQLNRSNSSTGGGGSSQESKQQSVNEEGDEGDEQSSLSLEGKKKKKRVEGEAEEEGEGEEKKDDSVLTKDPLSCKVILQEQKKDDDEAAFVCKVRRSESLEKRALKNADDLLAAGESKISRRSSDRALKRSDSLTKSEKTESNLYRRRQASQQQASKRKNGVGATSSSAGGGGGGGTNTRKCAIKRRHTVGGTKDLTWALDAVETGRSDSGSGAGGSEATYQHRRTSSPDLSRAARSACCTLVVAPWGGEGVGVTSPLESHV
SIO_010081: LOC111055426
subclass of: SO_0000673
so part of: LOC111055426
location: join(599479..599544,602432..602593,605334..605573,608829..609021,611113..611308,611762..611904,614261..614440,616209..616388,618386..618487,622125..622286,624585..624785,626396..626449,627494..627589,627817..627823,630973..631204,646290..646617,650051..650319,652122..652253,654526..654720,657761..657979,662133..662298,664354..664647,666440..666590,669380..669492,674391..674635,676028..676300,680877..681059,684991..685317)
location: region:599479-685317:1
so has part: feature:599479-599544:1:exon
so has part: feature:602432-602593:1:exon
so has part: feature:605334-605573:1:exon
so has part: feature:608829-609021:1:exon
so has part: feature:611113-611308:1:exon
so has part: feature:611762-611904:1:exon
so has part: feature:614261-614440:1:exon
so has part: feature:616209-616388:1:exon
so has part: feature:618386-618487:1:exon
so has part: feature:622125-622286:1:exon
so has part: feature:624585-624785:1:exon
so has part: feature:626396-626449:1:exon
so has part: feature:627494-627589:1:exon
so has part: feature:627817-627823:1:exon
so has part: feature:630973-631204:1:exon
so has part: feature:646290-646617:1:exon
so has part: feature:650051-650319:1:exon
so has part: feature:652122-652253:1:exon
so has part: feature:654526-654720:1:exon
so has part: feature:657761-657979:1:exon
so has part: feature:662133-662298:1:exon
so has part: feature:664354-664647:1:exon
so has part: feature:666440-666590:1:exon
so has part: feature:669380-669492:1:exon
so has part: feature:674391-674635:1:exon
so has part: feature:676028-676300:1:exon
so has part: feature:680877-681059:1:exon
so has part: feature:684991-685317:1:exon

XP_039296369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:599479-599544:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:602432-602593:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:605334-605573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608829-609021:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:611113-611308:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:611762-611904:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:614261-614440:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:616209-616388:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:618386-618487:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:622125-622286:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:624585-624785:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:626396-626449:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:627494-627589:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:627817-627823:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:630973-631204:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:646290-646617:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:650051-650319:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:652122-652253:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:654526-654720:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:657761-657979:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:662133-662298:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:664354-664647:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:666440-666590:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:669380-669492:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:674391-674635:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:676028-676300:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:680877-681059:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:684991-685317:1:exon

LOC111055426
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111055426
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111055426 isoform X5
translation: MSEEDSSSASGNACSTSPSVQQQLNSEVWRGLTSGGAGGVGSRSGGGPRSLLLKRSENGFGFTLRHFIVYPPESYTVLVPGCRSGCEPMDTMFVKSVRPNSPAACAGLQTGDRVVSVNGQTVTGSLTYAHVVHMISQSPKHLHLLVVPRHDDLLQLYFGDTAHNPETNPRVRLRSPSSGGSASPSRRPPLLSHHQSVPPLTPPLLSHHHHHSSRLLAVNPGGGRECSSLSLEAGVGGGGGNQEWRRASDGGGGGEKDGDSCSASSSLDSMSRADFHSSDDSLIIDRIRKSFEQKEEFLRGGVTQPSASPSNPPIQWPAAIPASCVIKPSTTEQAVPWRTKPAAVSPRCKGLTRIDESGSSSMSMSSCSSSALGGALVPVATRAQVFEEGAGLTGVQLFRSELAGLSEKRSAPDVALRRRQFETQGITSRTQDGGGPVPSAANQDKRAGISRSLDMGCAMSGNRTTPVGGSRLHCEPPVQRQSPTSNQGLATSNSSSSIGSEWGGGGTSSSPPPVSQRHKAVRQDSYLAACHKPQTTQAASSDAKDDLIKQSPTDDQQNTDVDQSHQKRVSYLKQIWTENANRTSPTPPSSSHLNERLKKKKKREDGEAAAEQDEGPLVVVEGSLMCSVLDTASSGTANRRVALSSSQQWNPVWAILRGPVLHLMRLKQAETPGLSSPLGTDQLACREEWWSQDLCARGVIIQQCVVDPSSTAPATATKRGANTRHVISVQVPPQSADHQPQPADQLLLQAADVCSHEQWLRALHNVVDKPAPRGEGRKNSEDCQPAGQSSQTPQVQVQQQQQQLASPKCKTWKGRVAKQFRRIGQAGSGGGGTREGGSSPISPTAGPPQASASYQEGASIGVPLDWCPQSANHDGVPLLVDVCCGEVEGRGLEVVGVYRVPGNTAAVTNLTEQVNKASGGDVIAGLVAQADVNVVSSLLKSLFRRLPDALLTSDLYPLFIAADKIPDPLLRAATIRKLVHSLPDHHFETLRFVMAHLKRVVARSEVNKMEARNLAIVFGPTLVRTSDDDSMLTLVTDMSHQCRIVETLILHADWCFSDDDIDRLQLASGGGGGSVSGDGPSLPPGPTVDHITDNHSLLLENIHKVQGMKSGIGEVGGGGGSNMKEISAKDIVVSIIGAANRKMHKSKSRSGCGTSSSKLQQQTSEVDGGGGSRGVAASIRESVLFSGSILAASSTASVKHQRKHDGVEERRGSGGSGQEQSGGGDGGSSNAAVDADGMIRTYTGLSACKQERIRRFEQETKAMLQRVGATAVEDRPKREFDFSANQDESPPSGEDLLSSLTSTFDAKMRSLLSGSAAAVTAEVEPPVAGDPADDVTADVTSSTSADVTSPAFRDPSLHRSTSTTSAGSSQHCYQLNRSNSSTGGGGSSQESKQQSVNEEGDEGDEQSSLSLEGKKKKKRVEGEAEEEGEGEEKKDDSVLTKDPLSCKVILQEQKKDDDEAAFVCKVRRSESLEKRALKNADDLLAAGESKISRRSSDRALKRSDSLTKSEKTESNLYRRRQASQQQASKRKNGVGATSSSAGGGGGGGTNTRKCAIKRRHTVGGTKDLTWALDAVETGRSDSGSGAGGSEATYQHRRTSSPDLSRAARSACCTLVVAPWGGEGVGVTSPLESHV
SIO_010081: LOC111055426
subclass of: SO_0000673
so part of: LOC111055426
location: join(599479..599544,602432..602593,605334..605573,608829..609021,611113..611308,611762..611904,614261..614440,616209..616388,618386..618487,622125..622286,626396..626449,627494..627593,630973..631204,646290..646617,650051..650319,652122..652253,654526..654720,657761..657979,662133..662298,664354..664647,666440..666590,669380..669492,674391..674635,676028..676300,680877..681059,684991..685317)
location: region:599479-685317:1
so has part: feature:599479-599544:1:exon
so has part: feature:602432-602593:1:exon
so has part: feature:605334-605573:1:exon
so has part: feature:608829-609021:1:exon
so has part: feature:611113-611308:1:exon
so has part: feature:611762-611904:1:exon
so has part: feature:614261-614440:1:exon
so has part: feature:616209-616388:1:exon
so has part: feature:618386-618487:1:exon
so has part: feature:622125-622286:1:exon
so has part: feature:626396-626449:1:exon
so has part: feature:627494-627593:1:exon
so has part: feature:630973-631204:1:exon
so has part: feature:646290-646617:1:exon
so has part: feature:650051-650319:1:exon
so has part: feature:652122-652253:1:exon
so has part: feature:654526-654720:1:exon
so has part: feature:657761-657979:1:exon
so has part: feature:662133-662298:1:exon
so has part: feature:664354-664647:1:exon
so has part: feature:666440-666590:1:exon
so has part: feature:669380-669492:1:exon
so has part: feature:674391-674635:1:exon
so has part: feature:676028-676300:1:exon
so has part: feature:680877-681059:1:exon
so has part: feature:684991-685317:1:exon

XP_039296373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:599479-599544:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:602432-602593:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:605334-605573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608829-609021:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:611113-611308:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:611762-611904:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:614261-614440:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:616209-616388:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:618386-618487:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:622125-622286:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:626396-626449:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:627494-627593:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:630973-631204:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:646290-646617:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:650051-650319:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:652122-652253:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:654526-654720:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:657761-657979:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:662133-662298:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:664354-664647:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:666440-666590:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:669380-669492:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:674391-674635:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:676028-676300:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:680877-681059:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:684991-685317:1:exon

LOC111055426
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111055426
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111055426 isoform X4
translation: MSEEDSSSASGNACSTSPSVQQQLNSEVWRGLTSGGAGGVGSRSGGGPRSLLLKRSENGFGFTLRHFIVYPPESYTVLVPGCRSGCEPMDTMFVKSVRPNSPAACAGLQTGDRVVSVNGQTVTGSLTYAHVVHMISQSPKHLHLLVVPRHDDLLQLYFGDTAHNPETNPRVRLRSPSSGGSASPSRRPPLLSHHQSVPPLTPPLLSHHHHHSSRLLAVNPGGGRECSSLSLEAGVGGGGGNQEWRRASDGGGGGEKDGDSCSASSSLDSMSRADFHSSDDSLIIDRIRKSFEQKEEFLRGGVTQPSASPSNPPIQWPAAIPASCVIKPSTTEQAVPWRTKPAAVSPRCKGLTRIDESGSSSMSMSSCSSSALGGALVPVATRAQVFEEGAGLTGVQLFRSELAGLSEKRSAPDVALRRRQFETQGITSRTQDGGGPVPSAANQDKRAGISRSLDMGCAMSGNRTTPVGGSRLHCEPPVQRQSPTSNQGLATSNSSSSIGSEWGGGGTSSSPPPVSQRHKAVRQDSYLAACHKPQTTQAASSDAKDDLIKQSPTDDQQNTDVDQSHQKRVSYLKQIWTENANRTSPTPPSSSQLLNERLKKKKKREDGEAAAEQDEGPLVVVEGSLMCSVLDTASSGTANRRVALSSSQQWNPVWAILRGPVLHLMRLKQAETPGLSSPLGTDQLACREEWWSQDLCARGVIIQQCVVDPSSTAPATATKRGANTRHVISVQVPPQSADHQPQPADQLLLQAADVCSHEQWLRALHNVVDKPAPRGEGRKNSEDCQPAGQSSQTPQVQVQQQQQQLASPKCKTWKGRVAKQFRRIGQAGSGGGGTREGGSSPISPTAGPPQASASYQEGASIGVPLDWCPQSANHDGVPLLVDVCCGEVEGRGLEVVGVYRVPGNTAAVTNLTEQVNKASGGDVIAGLVAQADVNVVSSLLKSLFRRLPDALLTSDLYPLFIAADKIPDPLLRAATIRKLVHSLPDHHFETLRFVMAHLKRVVARSEVNKMEARNLAIVFGPTLVRTSDDDSMLTLVTDMSHQCRIVETLILHADWCFSDDDIDRLQLASGGGGGSVSGDGPSLPPGPTVDHITDNHSLLLENIHKVQGMKSGIGEVGGGGGSNMKEISAKDIVVSIIGAANRKMHKSKSRSGCGTSSSKLQQQTSEVDGGGGSRGVAASIRESVLFSGSILAASSTASVKHQRKHDGVEERRGSGGSGQEQSGGGDGGSSNAAVDADGMIRTYTGLSACKQERIRRFEQETKAMLQRVGATAVEDRPKREFDFSANQDESPPSGEDLLSSLTSTFDAKMRSLLSGSAAAVTAEVEPPVAGDPADDVTADVTSSTSADVTSPAFRDPSLHRSTSTTSAGSSQHCYQLNRSNSSTGGGGSSQESKQQSVNEEGDEGDEQSSLSLEGKKKKKRVEGEAEEEGEGEEKKDDSVLTKDPLSCKVILQEQKKDDDEAAFVCKVRRSESLEKRALKNADDLLAAGESKISRRSSDRALKRSDSLTKSEKTESNLYRRRQASQQQASKRKNGVGATSSSAGGGGGGGTNTRKCAIKRRHTVGGTKDLTWALDAVETGRSDSGSGAGGSEATYQHRRTSSPDLSRAARSACCTLVVAPWGGEGVGVTSPLESHV
SIO_010081: LOC111055426
subclass of: SO_0000673
so part of: LOC111055426
location: join(599479..599544,602432..602593,605334..605573,608829..609021,611113..611308,611762..611904,614261..614440,616209..616388,618386..618487,622125..622286,626396..626449,627494..627589,627817..627823,630973..631204,646290..646617,650051..650319,652122..652253,654526..654720,657761..657979,662133..662298,664354..664647,666440..666590,669380..669492,674391..674635,676028..676300,680877..681059,684991..685317)
location: region:599479-685317:1
so has part: feature:599479-599544:1:exon
so has part: feature:602432-602593:1:exon
so has part: feature:605334-605573:1:exon
so has part: feature:608829-609021:1:exon
so has part: feature:611113-611308:1:exon
so has part: feature:611762-611904:1:exon
so has part: feature:614261-614440:1:exon
so has part: feature:616209-616388:1:exon
so has part: feature:618386-618487:1:exon
so has part: feature:622125-622286:1:exon
so has part: feature:626396-626449:1:exon
so has part: feature:627494-627589:1:exon
so has part: feature:627817-627823:1:exon
so has part: feature:630973-631204:1:exon
so has part: feature:646290-646617:1:exon
so has part: feature:650051-650319:1:exon
so has part: feature:652122-652253:1:exon
so has part: feature:654526-654720:1:exon
so has part: feature:657761-657979:1:exon
so has part: feature:662133-662298:1:exon
so has part: feature:664354-664647:1:exon
so has part: feature:666440-666590:1:exon
so has part: feature:669380-669492:1:exon
so has part: feature:674391-674635:1:exon
so has part: feature:676028-676300:1:exon
so has part: feature:680877-681059:1:exon
so has part: feature:684991-685317:1:exon

XP_039296372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:599479-599544:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:602432-602593:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:605334-605573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608829-609021:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:611113-611308:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:611762-611904:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:614261-614440:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:616209-616388:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:618386-618487:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:622125-622286:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:626396-626449:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:627494-627589:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:627817-627823:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:630973-631204:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:646290-646617:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:650051-650319:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:652122-652253:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:654526-654720:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:657761-657979:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:662133-662298:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:664354-664647:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:666440-666590:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:669380-669492:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:674391-674635:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:676028-676300:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:680877-681059:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:684991-685317:1:exon

LOC111055426
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111055426
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 21-B isoform X3
translation: MSEEDSSSASGNACSTSPSVQQQLNSEVWRGLTSGGAGGVGSRSGGGPRSLLLKRSENGFGFTLRHFIVYPPESYTVLVPGCRSGCEPMDTMFVKSVRPNSPAACAGLQTGDRVVSVNGQTVTGSLTYAHVVHMISQSPKHLHLLVVPRHDDLLQLYFGDTAHNPETNPRVRLRSPSSGGSASPSRRPPLLSHHQSVPPLTPPLLSHHHHHSSRLLAVNPGGGRECSSLSLEAGVGGGGGNQEWRRASDGGGGGEKDGDSCSASSSLDSMSRADFHSSDDSLIIDRIRKSFEQKEEFLRGGVTQPSASPSNPPIQWPAAIPASCVIKPSTTEQVPWRTKPAAVSPRCKGLTRIDESGSSSMSMSSCSSSALGGALVPVATRAQVFEEGAGLTGVQLFRSELAGLSEKRSAPDVALRRRQFETQGITSRTQDGGGPVPSAANQDKRAGISRSLDMGCAMSGNRTTPVGGSRLHCEPPVQRQSPTSNQGLATSNSSSSIGSEWGGGGTSSSPPPVSQRHKAVRQDSYLAACHKPQTTQAASSEVAADSAAAVTADSENEKQQLEKKKQKKKKLKSSSLRSAVRPSRLDLAKVARPLSCGGTPPPSPLSQDAKDDLIKQSPTDDQQNTDVDQSHQKRVSYLKQIWTENANRTSPTPPSSSQLLNERLKKKKKREDGEAAAEQDEGPLVVVEGSLMCSVLDTASSGTANRRVALSSSQQWNPVWAILRGPVLHLMRLKQAETPGLSSPLGTDQLACREEWWSQDLCARGVIIQQCVVDPSSTAPATATKRGANTRHVISVQVPPQSADHQPQPADQLLLQAADVCSHEQWLRALHNVVDKPAPRGEGRKNSEDCQPAGQSSQTPQVQVQQQQQQLASPKCKTWKGRVAKQFRRIGQAGSGGGGTREGGSSPISPTAGPPQASASYQEGASIGVPLDWCPQSANHDGVPLLVDVCCGEVEGRGLEVVGVYRVPGNTAAVTNLTEQVNKASGGDVIAGLVAQADVNVVSSLLKSLFRRLPDALLTSDLYPLFIAADKIPDPLLRAATIRKLVHSLPDHHFETLRFVMAHLKRVVARSEVNKMEARNLAIVFGPTLVRTSDDDSMLTLVTDMSHQCRIVETLILHADWCFSDDDIDRLQLASGGGGGSVSGDGPSLPPGPTVDHITDNHSLLLENIHKVQGMKSGIGEVGGGGGSNMKEISAKDIVVSIIGAANRKMHKSKSRSGCGTSSSKLQQQTSEVDGGGGSRGVAASIRESVLFSGSILAASSTASVKHQRKHDGVEERRGSGGSGQEQSGGGDGGSSNAAVDADGMIRTYTGLSACKQERIRRFEQETKAMLQRVGATAVEDRPKREFDFSANQDESPPSGEDLLSSLTSTFDAKMRSLLSGSAAAVTAEVEPPVAGDPADDVTADVTSSTSADVTSPAFRDPSLHRSTSTTSAGSSQHCYQLNRSNSSTGGGGSSQESKQQSVNEEGDEGDEQSSLSLEGKKKKKRVEGEAEEEGEGEEKKDDSVLTKDPLSCKVILQEQKKDDDEAAFVCKVRRSESLEKRALKNADDLLAAGESKISRRSSDRALKRSDSLTKSEKTESNLYRRRQASQQQASKRKNGVGATSSSAGGGGGGGTNTRKCAIKRRHTVGGTKDLTWALDAVETGRSDSGSGAGGSEATYQHRRTSSPDLSRAARSACCTLVVAPWGGEGVGVTSPLESHV
SIO_010081: LOC111055426
subclass of: SO_0000673
so part of: LOC111055426
location: join(599479..599544,602432..602593,605334..605573,608829..609021,611113..611308,611762..611904,614264..614440,616209..616388,618386..618487,622125..622286,624585..624785,626396..626449,627494..627589,627817..627823,630973..631204,646290..646617,650051..650319,652122..652253,654526..654720,657761..657979,662133..662298,664354..664647,666440..666590,669380..669492,674391..674635,676028..676300,680877..681059,684991..685317)
location: region:599479-685317:1
so has part: feature:599479-599544:1:exon
so has part: feature:602432-602593:1:exon
so has part: feature:605334-605573:1:exon
so has part: feature:608829-609021:1:exon
so has part: feature:611113-611308:1:exon
so has part: feature:611762-611904:1:exon
so has part: feature:614264-614440:1:exon
so has part: feature:616209-616388:1:exon
so has part: feature:618386-618487:1:exon
so has part: feature:622125-622286:1:exon
so has part: feature:624585-624785:1:exon
so has part: feature:626396-626449:1:exon
so has part: feature:627494-627589:1:exon
so has part: feature:627817-627823:1:exon
so has part: feature:630973-631204:1:exon
so has part: feature:646290-646617:1:exon
so has part: feature:650051-650319:1:exon
so has part: feature:652122-652253:1:exon
so has part: feature:654526-654720:1:exon
so has part: feature:657761-657979:1:exon
so has part: feature:662133-662298:1:exon
so has part: feature:664354-664647:1:exon
so has part: feature:666440-666590:1:exon
so has part: feature:669380-669492:1:exon
so has part: feature:674391-674635:1:exon
so has part: feature:676028-676300:1:exon
so has part: feature:680877-681059:1:exon
so has part: feature:684991-685317:1:exon

XP_039296371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:599479-599544:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:602432-602593:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:605334-605573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608829-609021:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:611113-611308:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:611762-611904:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:614264-614440:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:616209-616388:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:618386-618487:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:622125-622286:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:624585-624785:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:626396-626449:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:627494-627589:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:627817-627823:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:630973-631204:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:646290-646617:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:650051-650319:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:652122-652253:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:654526-654720:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:657761-657979:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:662133-662298:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:664354-664647:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:666440-666590:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:669380-669492:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:674391-674635:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:676028-676300:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:680877-681059:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:684991-685317:1:exon

LOC120354135
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354135
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(716253..729311)
location: region:716253-729311:-1
so has part: feature:716253-729311:-1:exon
subclass of: SO_0000010

120354135
type: Gene
SIO_000068: ncbigene

position:716253:-1
position: 716253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729311:-1
position: 729311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:716253-729311:-1:exon

LOC120354135
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354135
product: uncharacterized LOC120354135
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_039440445.1
SIO_010081: LOC120354135
subclass of: SO_0000673
so part of: LOC120354135
location: complement(join(716253..716928,720496..720678,723223..723495,724824..725068,729176..729311))
location: region:716253-729311:-1
so has part: feature:729176-729311:-1:exon
so has part: feature:724824-725068:-1:exon
so has part: feature:723223-723495:-1:exon
so has part: feature:720496-720678:-1:exon
so has part: feature:716253-716928:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:729176-729311:-1:exon

position:729176:-1
position: 729176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:724824-725068:-1:exon

position:724824:-1
position: 724824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725068:-1
position: 725068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:723223-723495:-1:exon

position:723223:-1
position: 723223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723495:-1
position: 723495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:720496-720678:-1:exon

position:720496:-1
position: 720496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720678:-1
position: 720678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:716253-716928:-1:exon

position:716928:-1
position: 716928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354135
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120354135
translation: MLQRVGATAVEDRPKRELDFSANQDESPPSGEDLLSSLTSTFDAKMRSLLSGSAAAVTAEVEPPVAGDPADDVTADVTSSTSADVTSPAFRDPSLHRSTSTTSAGSSQHCYQLNRSNSSTGGGGSSQESKQQSVNEEGDEGDEQSSLSLEGKKKKKRVEGEAEEEGEGEEKKDDSVLTKDPLSCKVILQEQKKDDDEAAFVCKVRRSESLEKRALKNADDLLAAGESKISRRSSDRALKRSDSLTKSEKTESNLYRRRQASQQQASKRKNGVAATSSSTGGGGGGGTNTRKCAIKRRHTVGGTKDLTWALDAVETGRSDSGSGAGGSEATYQHRRTSSPDLSRAARSACCTLVVAPWGGEGVGVTTPLESHV
SIO_010081: LOC120354135
subclass of: SO_0000673
so part of: LOC120354135
location: complement(join(716602..716928,720496..720678,723223..723495,724824..725068,729176..729266))
location: region:716602-729266:-1
so has part: feature:729176-729266:-1:exon
so has part: feature:724824-725068:-1:exon
so has part: feature:723223-723495:-1:exon
so has part: feature:720496-720678:-1:exon
so has part: feature:716602-716928:-1:exon

XP_039296379.1
type: Protein
SIO_000068: ncbiprotein

position:716602:-1
position: 716602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729266:-1
position: 729266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:729176-729266:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:724824-725068:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:723223-723495:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:720496-720678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:716602-716928:-1:exon

LOC120348912
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120348912
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(747358..>751691)
location: region:747358-751691:-1
so has part: feature:747358-751691:-1:exon
subclass of: SO_0000010

120348912
type: Gene
SIO_000068: ncbigene

position:747358:-1
position: 747358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751691:-1
position: 751691
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:747358-751691:-1:exon

LOC120348912
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 108931
gene: LOC120348912
product: gastrula zinc finger protein xFG20-1-like, transcript variant X2
inference: similar to RNA sequence (same species):INSD:GANM01010901.1
exception: annotated by transcript or proteomic data
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XR_005572833.1
SIO_010081: LOC120348912
so part of: LOC120348912
location: complement(join(747358..747759,747818..748856,751426..>751691))
location: region:747358-751691:-1
so has part: feature:751426-751691:-1:exon
so has part: feature:747818-748856:-1:exon
so has part: feature:747358-747759:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:751426-751691:-1:exon

position:751426:-1
position: 751426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:747818-748856:-1:exon

position:747818:-1
position: 747818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748856:-1
position: 748856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:747358-747759:-1:exon

position:747759:-1
position: 747759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120348912
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120348912
product: gastrula zinc finger protein xFG20-1-like, transcript variant X1
inference: similar to RNA sequence (same species):INSD:GANM01010901.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 604 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_039440446.1
SIO_010081: LOC120348912
subclass of: SO_0000673
so part of: LOC120348912
location: complement(join(747358..748856,751426..>751691))
location: region:747358-751691:-1
so has part: feature:751426-751691:-1:exon
so has part: feature:747358-748856:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:751426-751691:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:747358-748856:-1:exon

LOC120348912
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120348912
product: gastrula zinc finger protein xFG20-1-like, transcript variant X3
inference: similar to RNA sequence (same species):INSD:GANM01010901.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 604 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_039440447.1
SIO_010081: LOC120348912
subclass of: SO_0000673
so part of: LOC120348912
location: complement(join(747359..748016,748212..748856,751426..>751691))
location: region:747359-751691:-1
so has part: feature:751426-751691:-1:exon
so has part: feature:748212-748856:-1:exon
so has part: feature:747359-748016:-1:exon

position:747359:-1
position: 747359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751426-751691:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:748212-748856:-1:exon

position:748212:-1
position: 748212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:747359-748016:-1:exon

position:748016:-1
position: 748016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120348912
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120348912
inference: similar to RNA sequence (same species):INSD:GANM01010901.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 507 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastrula zinc finger protein xFG20-1-like isoform X2
translation: MRCHSGEEERPRYPCHICFKVFNWKSNLKTHLNRLHYFGDQPLPKYKCSLCTKQFTWKNSLTTHVQVMHASGDGSQSEPQKLSCEVCGKQFTWKSNLNTHMESHTRASKLACPICHKLFNWKSNLKAHMNTAHLYPHALQKHQCTQCHKLFNSKASLQKHTDTIHNEKPEKHACTICKREFLWKSNLATHEARHADEGGKRFTCTVCGKGFGWRSNLNKHMETHDASTPKHQCPECNHKFASKSGLTMHMAKHYDQGRFVCHVCNKSFTWKANYNVHMASKHPDVDRSAYYSSSSSSSSSTSDHHTFHPPPHQLIEQKTFTDLDSPENLEANRSAAASPFVVEDQKIQNGGSFVTSDQKMQNGMRATCELAYPSPAAYSMQMGKDACESVSSASRMMPNCESVSSPNRLMPNCEPISSPGRLMPNCELVSSASRMMPNCESVSSASRMMPNCEPISTASRMMPNCEPVSSPNRLMPNCESVSNRLAASSEAMNLSAAHLQMSAYHSMNTHALAS
SIO_010081: LOC120348912
subclass of: SO_0000673
so part of: LOC120348912
location: complement(join(747890..748016,748212..748856,751426..>751691))
location: region:747890-751691:-1
so has part: feature:751426-751691:-1:exon
so has part: feature:748212-748856:-1:exon
so has part: feature:747890-748016:-1:exon

XP_039296381.1
type: Protein
SIO_000068: ncbiprotein

position:747890:-1
position: 747890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751426-751691:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:748212-748856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:747890-748016:-1:exon

LOC120348912
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120348912
inference: similar to RNA sequence (same species):INSD:GANM01010901.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 507 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastrula zinc finger protein xFG20-1-like isoform X1
translation: MRCHSGEEERPRYPCHICFKVFNWKSNLKTHLNRLHYFGDQPLPKYKCSLCTKQFTWKNSLTTHVQVMHASGDGSQSEPQKLSCEVCGKQFTWKSNLNTHMESHTRASKLACPICHKLFNWKSNLKAHMNTAHLYPHALQKHQCTQCHKLFNSKASLQKHTDTIHNEKPEKHACTICKREFLWKSNLATHEARHADEGGKRFTCTVCGKGFGWRSNLNKHMETHDASTPKHQCPECNHKFASKSGLTMHMAKHYDQGRFVCHVCNKSFTWKANYNVHMASKHPDVDRSAYYSSSSSSSSSTSDHHTFHPPPHQLIEQKTFTDLDSPENLEANRSAAASPFVVEDQKIQNGGSFVTSDQKMQNGMRATCELAYPSPAAYSMQMGKDACESVSSASRMMPNCESVSSPNRLMPNCEPISSPGRLMPNCELVSSASRMMPNCESVSSASRMMPNCEPISTASRMMPNCEPVSSPNRLMPNCEPVSSASRMMPNCEPVSSPNRLMPNCEPVSSPNRLMPNCEPVSSPIRLMPNCEPVSSPNRLMPNCESVSNRLAASSEAMNLSAAHLQMSAYHSMNTHALAS
SIO_010081: LOC120348912
subclass of: SO_0000673
so part of: LOC120348912
location: complement(join(747890..748856,751426..>751691))
location: region:747890-751691:-1
so has part: feature:751426-751691:-1:exon
so has part: feature:747890-748856:-1:exon

XP_039296380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:751426-751691:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:747890-748856:-1:exon

LOC120354251
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354251
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(756641..793236)
location: region:756641-793236:-1
so has part: feature:756641-793236:-1:exon
subclass of: SO_0000010

120354251
type: Gene
SIO_000068: ncbigene

position:756641:-1
position: 756641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793236:-1
position: 793236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:756641-793236:-1:exon

LOC120354251
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354251
product: uncharacterized LOC120354251
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039441125.1
SIO_010081: LOC120354251
subclass of: SO_0000673
so part of: LOC120354251
location: complement(join(756641..756783,763169..763435,779704..779824,779888..780042,782256..782717,784874..785014,788023..788430,790528..790672,793101..793236))
location: region:756641-793236:-1
so has part: feature:793101-793236:-1:exon
so has part: feature:790528-790672:-1:exon
so has part: feature:788023-788430:-1:exon
so has part: feature:784874-785014:-1:exon
so has part: feature:782256-782717:-1:exon
so has part: feature:779888-780042:-1:exon
so has part: feature:779704-779824:-1:exon
so has part: feature:763169-763435:-1:exon
so has part: feature:756641-756783:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:793101-793236:-1:exon

position:793101:-1
position: 793101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:790528-790672:-1:exon

position:790528:-1
position: 790528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790672:-1
position: 790672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:788023-788430:-1:exon

position:788023:-1
position: 788023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788430:-1
position: 788430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:784874-785014:-1:exon

position:784874:-1
position: 784874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785014:-1
position: 785014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:782256-782717:-1:exon

position:782256:-1
position: 782256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782717:-1
position: 782717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:779888-780042:-1:exon

position:779888:-1
position: 779888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780042:-1
position: 780042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:779704-779824:-1:exon

position:779704:-1
position: 779704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779824:-1
position: 779824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:763169-763435:-1:exon

position:763169:-1
position: 763169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763435:-1
position: 763435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:756641-756783:-1:exon

position:756783:-1
position: 756783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354251
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354251
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120354251
translation: MSDEPPAELFGSDSLPETDDVIKGDETMEFSTSEESSKMVNADFQKVMDSISVSADGVDVDDEKLLSQFVVGNLGADDHHHGPTAAEESSSSSLADEKALLESVLARAANSDQVATLGDQVATLGDQVATLGGQGRTLGSLVGALSGHVASPAAGDETPEETMQVERLMESIHSGSSNDEPKVAVGSSDVKEEEEEREVEAMEVDQQSNQLIITETRGAAADTETFLQQSLQGDDDTISSTTMAVPTTTTDQSLTSLQAAADIFGDDEEDDDDVIKAAGMQSSTADDNGSQQTVMTALVGGGDVITASGGGDVMTSSSSGGGQLMTSSVVREEEELTSVEDVLSALHSELDEEEEATRGGGGGGGGGEVIKKVEEKSKWKLKVEQQRQLQQAQVTKPAKPSSRRRQRSDVQVLVSGCKSTTSSQRGAAQLAVGSRRRPNPLIFKRWARKLCQGSQQLAYTALICELHFRPQDIREVFVNGKKKWVLTEGALPKPFTASALAAAAAQGGSLAALQAGNAAAAAMTSPGGKRPVGRPSGLYRQQQFEALQAAQARANKLQRENSVKTLWLKMRRQVQLNCCTH
SIO_010081: LOC120354251
subclass of: SO_0000673
so part of: LOC120354251
location: complement(join(756730..756783,763169..763435,779704..779824,779888..780042,782256..782717,784874..785014,788023..788430,790528..790665))
location: region:756730-790665:-1
so has part: feature:790528-790665:-1:exon
so has part: feature:788023-788430:-1:exon
so has part: feature:784874-785014:-1:exon
so has part: feature:782256-782717:-1:exon
so has part: feature:779888-780042:-1:exon
so has part: feature:779704-779824:-1:exon
so has part: feature:763169-763435:-1:exon
so has part: feature:756730-756783:-1:exon

XP_039297059.1
type: Protein
SIO_000068: ncbiprotein

position:756730:-1
position: 756730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790665:-1
position: 790665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:790528-790665:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:788023-788430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:784874-785014:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:782256-782717:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:779888-780042:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:779704-779824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:763169-763435:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:756730-756783:-1:exon

LOC120354136
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354136
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(801971..819174)
location: region:801971-819174:-1
so has part: feature:801971-819174:-1:exon
subclass of: SO_0000010

120354136
type: Gene
SIO_000068: ncbigene

position:801971:-1
position: 801971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819174:-1
position: 819174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:801971-819174:-1:exon

LOC120354136
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354136
product: ATP-binding cassette sub-family F member 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_039440448.1
SIO_010081: LOC120354136
subclass of: SO_0000673
so part of: LOC120354136
location: complement(join(801971..802356,806686..806852,813460..813680,819021..819174))
location: region:801971-819174:-1
so has part: feature:819021-819174:-1:exon
so has part: feature:813460-813680:-1:exon
so has part: feature:806686-806852:-1:exon
so has part: feature:801971-802356:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:819021-819174:-1:exon

position:819021:-1
position: 819021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:813460-813680:-1:exon

position:813460:-1
position: 813460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:813680:-1
position: 813680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:806686-806852:-1:exon

position:806686:-1
position: 806686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806852:-1
position: 806852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:801971-802356:-1:exon

position:802356:-1
position: 802356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354136
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354136
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-binding cassette sub-family F member 3-like
translation: MGLLSPSSGDQHTHRAIKFGYFSQHHVDQLAMGVSSVELLQQSYPGKPVEEYRRQLGSFGVSGDLALQTVGSLSGGQKSRVAFARMCMASPNFLVLDEPTNHLDIETIEALGKAINKYNGGVILVSHDERLIRMVCKELWVCGGGTVTSIEGGFDEYRRIVERELAETNK
SIO_010081: LOC120354136
subclass of: SO_0000673
so part of: LOC120354136
location: complement(join(806697..806852,813460..813680,819021..819156))
location: region:806697-819156:-1
so has part: feature:819021-819156:-1:exon
so has part: feature:813460-813680:-1:exon
so has part: feature:806697-806852:-1:exon

XP_039296382.1
type: Protein
SIO_000068: ncbiprotein

position:806697:-1
position: 806697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819156:-1
position: 819156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819021-819156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:813460-813680:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:806697-806852:-1:exon

LOC120354252
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354252
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 821591..824663
location: region:821591-824663:1
so has part: feature:821591-824663:1:exon
subclass of: SO_0000010

120354252
type: Gene
SIO_000068: ncbigene

position:821591:1
position: 821591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824663:1
position: 824663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821591-824663:1:exon

LOC120354252
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354252
product: heterochromatin protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 69% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_039441126.1
SIO_010081: LOC120354252
subclass of: SO_0000673
so part of: LOC120354252
location: join(821591..821743,824426..824663)
location: region:821591-824663:1
so has part: feature:821591-821743:1:exon
so has part: feature:824426-824663:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:821591-821743:1:exon

position:821743:1
position: 821743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:824426-824663:1:exon

position:824426:1
position: 824426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120354252
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354252
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterochromatin protein 1-like
translation: MVGPADGLVTTQEEFVVEKIVSRRFNQKKKQYEYLLKWEGYPPEQNTWEPAQNMSTCQHLLAEFESNLAKQGAAKGLRYPHSRAPRAAPVGALKKGTPAAVSRRWTSNRRSPVHGNSQRVS
SIO_010081: LOC120354252
subclass of: SO_0000673
so part of: LOC120354252
location: join(821616..821743,824426..824663)
location: region:821616-824663:1
so has part: feature:821616-821743:1:exon
so has part: feature:824426-824663:1:exon

XP_039297060.1
type: Protein
SIO_000068: ncbiprotein

position:821616:1
position: 821616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821616-821743:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:824426-824663:1:exon

LOC120354137
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354137
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 824586..853926
location: region:824586-853926:1
so has part: feature:824586-853926:1:exon
subclass of: SO_0000010

120354137
type: Gene
SIO_000068: ncbigene

position:824586:1
position: 824586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:853926:1
position: 853926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:824586-853926:1:exon

LOC120354137
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354137
product: uncharacterized LOC120354137, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 4 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_039440449.1
SIO_010081: LOC120354137
subclass of: SO_0000673
so part of: LOC120354137
location: join(824586..824654,825368..825600,827424..827590,830123..830275,833146..833390,834744..834909,836497..836641,840165..840478,845759..845844,846872..847052,850771..850947,851661..851844,853391..853926)
location: region:824586-853926:1
so has part: feature:824586-824654:1:exon
so has part: feature:825368-825600:1:exon
so has part: feature:827424-827590:1:exon
so has part: feature:830123-830275:1:exon
so has part: feature:833146-833390:1:exon
so has part: feature:834744-834909:1:exon
so has part: feature:836497-836641:1:exon
so has part: feature:840165-840478:1:exon
so has part: feature:845759-845844:1:exon
so has part: feature:846872-847052:1:exon
so has part: feature:850771-850947:1:exon
so has part: feature:851661-851844:1:exon
so has part: feature:853391-853926:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:824586-824654:1:exon

position:824654:1
position: 824654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:825368-825600:1:exon

position:825368:1
position: 825368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:825600:1
position: 825600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:827424-827590:1:exon

position:827424:1
position: 827424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827590:1
position: 827590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:830123-830275:1:exon

position:830123:1
position: 830123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830275:1
position: 830275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:833146-833390:1:exon

position:833146:1
position: 833146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:833390:1
position: 833390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:834744-834909:1:exon

position:834744:1
position: 834744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:834909:1
position: 834909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:836497-836641:1:exon

position:836497:1
position: 836497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:836641:1
position: 836641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:840165-840478:1:exon

position:840165:1
position: 840165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:840478:1
position: 840478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:845759-845844:1:exon

position:845759:1
position: 845759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845844:1
position: 845844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:846872-847052:1:exon

position:846872:1
position: 846872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847052:1
position: 847052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:850771-850947:1:exon

position:850771:1
position: 850771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850947:1
position: 850947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:851661-851844:1:exon

position:851661:1
position: 851661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:851844:1
position: 851844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:853391-853926:1:exon

position:853391:1
position: 853391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120354137
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354137
product: uncharacterized LOC120354137, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 4 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_039440451.1
SIO_010081: LOC120354137
subclass of: SO_0000673
so part of: LOC120354137
location: join(824586..824654,825368..825600,827424..827590,830123..830275,833146..833390,834744..834909,836500..836641,840165..840478,845759..845844,846872..847052,850771..850947,851661..851844,853391..853926)
location: region:824586-853926:1
so has part: feature:824586-824654:1:exon
so has part: feature:825368-825600:1:exon
so has part: feature:827424-827590:1:exon
so has part: feature:830123-830275:1:exon
so has part: feature:833146-833390:1:exon
so has part: feature:834744-834909:1:exon
so has part: feature:836500-836641:1:exon
so has part: feature:840165-840478:1:exon
so has part: feature:845759-845844:1:exon
so has part: feature:846872-847052:1:exon
so has part: feature:850771-850947:1:exon
so has part: feature:851661-851844:1:exon
so has part: feature:853391-853926:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:824586-824654:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:825368-825600:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:827424-827590:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:830123-830275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:833146-833390:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:834744-834909:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:836500-836641:1:exon

position:836500:1
position: 836500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:840165-840478:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:845759-845844:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:846872-847052:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:850771-850947:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:851661-851844:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:853391-853926:1:exon

LOC120354137
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354137
product: uncharacterized LOC120354137, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 4 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_039440450.1
SIO_010081: LOC120354137
subclass of: SO_0000673
so part of: LOC120354137
location: join(824586..824654,825368..825600,827424..827590,830123..830275,833146..833390,834747..834909,836497..836641,840165..840478,845759..845844,846872..847052,850771..850947,851661..851844,853391..853926)
location: region:824586-853926:1
so has part: feature:824586-824654:1:exon
so has part: feature:825368-825600:1:exon
so has part: feature:827424-827590:1:exon
so has part: feature:830123-830275:1:exon
so has part: feature:833146-833390:1:exon
so has part: feature:834747-834909:1:exon
so has part: feature:836497-836641:1:exon
so has part: feature:840165-840478:1:exon
so has part: feature:845759-845844:1:exon
so has part: feature:846872-847052:1:exon
so has part: feature:850771-850947:1:exon
so has part: feature:851661-851844:1:exon
so has part: feature:853391-853926:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:824586-824654:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:825368-825600:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:827424-827590:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:830123-830275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:833146-833390:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:834747-834909:1:exon

position:834747:1
position: 834747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:836497-836641:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:840165-840478:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:845759-845844:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:846872-847052:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:850771-850947:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:851661-851844:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:853391-853926:1:exon

LOC120354137
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354137
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120354137 isoform X1
translation: MIRPLDMVEGGGGALKRSLSDDSDYSDNMADYDGDYKRIKMEDSDSDTGGVVMVPRRGGANSVVGRARAQINGLKRERDGEGLAAALGLESDEEGAAGQVKVRASSLSPTNQQVLVASAKGVVKVDPSQVPNLTSGVYIMSNKSGIVKLDSVTPNSAISSLQRKGLLKSTPSHKSGVIMLGSRMGPGAAAATKSGILRRPTVAASSPTKQPQSNSNTMATTAATALGGPRPVGPLRPVPKPSNIISRQTGVMSKQAPLASRLHGLNKGVLSTPSPLKRPGSMLKSGIKPIESILGTVGQLRKKDELGTPQKRILGGGARGGVARGGKSTAKMIHKGATVVPRTTLSSTLGVMNTDLDNIKLESYAGGTGEPDVVVGLPDDFPPLGDLPPITPDSPPRPLTLCPLTGRVLARAEGEPTPPPSPPKVDIPTTTTTIQEIITTTTTATTVAQPHIIKVEMSSQEIPANVEPATVSVRKVASRSRAKSKGAANAAAESATSLGTITVPSRKISYQQQQQQIVVEQQPDEIDDNEMVTITGDDGLLYQVSQADLRNAGGGALLVDGGYVAGEASSVTVEAGDQGGATQVLTLDSAYADAVAQLIPEQFYVKEGGSEGGVAVVEAGGGGAVVVDGAAEGGVVVGAGGEEEEEGGQVVAQLVEACEPTPGGGRRVVLLLPDGNLMMTEVDEEQYAALGLDNK
SIO_010081: LOC120354137
subclass of: SO_0000673
so part of: LOC120354137
location: join(825429..825600,827424..827590,830123..830275,833146..833390,834744..834909,836497..836641,840165..840478,845759..845844,846872..847052,850771..850947,851661..851844,853391..853488)
location: region:825429-853488:1
so has part: feature:825429-825600:1:exon
so has part: feature:827424-827590:1:exon
so has part: feature:830123-830275:1:exon
so has part: feature:833146-833390:1:exon
so has part: feature:834744-834909:1:exon
so has part: feature:836497-836641:1:exon
so has part: feature:840165-840478:1:exon
so has part: feature:845759-845844:1:exon
so has part: feature:846872-847052:1:exon
so has part: feature:850771-850947:1:exon
so has part: feature:851661-851844:1:exon
so has part: feature:853391-853488:1:exon

XP_039296383.1
type: Protein
SIO_000068: ncbiprotein

position:825429:1
position: 825429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:853488:1
position: 853488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825429-825600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:827424-827590:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:830123-830275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833146-833390:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834744-834909:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836497-836641:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:840165-840478:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:845759-845844:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:846872-847052:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:850771-850947:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:851661-851844:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:853391-853488:1:exon

LOC120354137
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354137
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120354137 isoform X3
translation: MIRPLDMVEGGGGALKRSLSDDSDYSDNMADYDGDYKRIKMEDSDSDTGGVVMVPRRGGANSVVGRARAQINGLKRERDGEGLAAALGLESDEEGAAGQVKVRASSLSPTNQQVLVASAKGVVKVDPSQVPNLTSGVYIMSNKSGIVKLDSVTPNSAISSLQRKGLLKSTPSHKSGVIMLGSRMGPGAAAATKSGILRRPTVAASSPTKQPQSNSNTMATTAATALGGPRPVGPLRPVPKPSNIISRQTGVMSKQAPLASRLHGLNKGVLSTPSPLKRPGSMLKSGIKPIESILGTVGQLRKDELGTPQKRILGGGARGGVARGGKSTAKMIHKGATVVPRTTLSSTLGVMNTDLDNIKLESYAGGTGEPDVVVGLPDDFPPLGDLPPITPDSPPRPLTLCPLTGRVLARAEGEPTPPPSPPKVDIPTTTTTIQEIITTTTTATTVAQPHIIKVEMSSQEIPANVEPATVSVRKVASRSRAKSKGAANAAAESATSLGTITVPSRKISYQQQQQQIVVEQQPDEIDDNEMVTITGDDGLLYQVSQADLRNAGGGALLVDGGYVAGEASSVTVEAGDQGGATQVLTLDSAYADAVAQLIPEQFYVKEGGSEGGVAVVEAGGGGAVVVDGAAEGGVVVGAGGEEEEEGGQVVAQLVEACEPTPGGGRRVVLLLPDGNLMMTEVDEEQYAALGLDNK
SIO_010081: LOC120354137
subclass of: SO_0000673
so part of: LOC120354137
location: join(825429..825600,827424..827590,830123..830275,833146..833390,834744..834909,836500..836641,840165..840478,845759..845844,846872..847052,850771..850947,851661..851844,853391..853488)
location: region:825429-853488:1
so has part: feature:825429-825600:1:exon
so has part: feature:827424-827590:1:exon
so has part: feature:830123-830275:1:exon
so has part: feature:833146-833390:1:exon
so has part: feature:834744-834909:1:exon
so has part: feature:836500-836641:1:exon
so has part: feature:840165-840478:1:exon
so has part: feature:845759-845844:1:exon
so has part: feature:846872-847052:1:exon
so has part: feature:850771-850947:1:exon
so has part: feature:851661-851844:1:exon
so has part: feature:853391-853488:1:exon

XP_039296385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:825429-825600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:827424-827590:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:830123-830275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833146-833390:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834744-834909:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836500-836641:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:840165-840478:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:845759-845844:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:846872-847052:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:850771-850947:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:851661-851844:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:853391-853488:1:exon

LOC120354137
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354137
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120354137 isoform X2
translation: MIRPLDMVEGGGGALKRSLSDDSDYSDNMADYDGDYKRIKMEDSDSDTGGVVMVPRRGGANSVVGRARAQINGLKRERDGEGLAAALGLESDEEGAAGQVKVRASSLSPTNQQVLVASAKGVVKVDPSQVPNLTSGVYIMSNKSGIVKLDSVTPNSAISSLQRKGLLKSTPSHKSGVIMLGSRMGPGAAAATKSGILRRPTVAASSPTKQPQSNSNTMATTAATALGGPRPVGPLRPVPKPSNIIRQTGVMSKQAPLASRLHGLNKGVLSTPSPLKRPGSMLKSGIKPIESILGTVGQLRKKDELGTPQKRILGGGARGGVARGGKSTAKMIHKGATVVPRTTLSSTLGVMNTDLDNIKLESYAGGTGEPDVVVGLPDDFPPLGDLPPITPDSPPRPLTLCPLTGRVLARAEGEPTPPPSPPKVDIPTTTTTIQEIITTTTTATTVAQPHIIKVEMSSQEIPANVEPATVSVRKVASRSRAKSKGAANAAAESATSLGTITVPSRKISYQQQQQQIVVEQQPDEIDDNEMVTITGDDGLLYQVSQADLRNAGGGALLVDGGYVAGEASSVTVEAGDQGGATQVLTLDSAYADAVAQLIPEQFYVKEGGSEGGVAVVEAGGGGAVVVDGAAEGGVVVGAGGEEEEEGGQVVAQLVEACEPTPGGGRRVVLLLPDGNLMMTEVDEEQYAALGLDNK
SIO_010081: LOC120354137
subclass of: SO_0000673
so part of: LOC120354137
location: join(825429..825600,827424..827590,830123..830275,833146..833390,834747..834909,836497..836641,840165..840478,845759..845844,846872..847052,850771..850947,851661..851844,853391..853488)
location: region:825429-853488:1
so has part: feature:825429-825600:1:exon
so has part: feature:827424-827590:1:exon
so has part: feature:830123-830275:1:exon
so has part: feature:833146-833390:1:exon
so has part: feature:834747-834909:1:exon
so has part: feature:836497-836641:1:exon
so has part: feature:840165-840478:1:exon
so has part: feature:845759-845844:1:exon
so has part: feature:846872-847052:1:exon
so has part: feature:850771-850947:1:exon
so has part: feature:851661-851844:1:exon
so has part: feature:853391-853488:1:exon

XP_039296384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:825429-825600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:827424-827590:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:830123-830275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833146-833390:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834747-834909:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836497-836641:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:840165-840478:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:845759-845844:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:846872-847052:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:850771-850947:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:851661-851844:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:853391-853488:1:exon

LOC120354253
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354253
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(861281..908383)
location: region:861281-908383:-1
so has part: feature:861281-908383:-1:exon
subclass of: SO_0000010

120354253
type: Gene
SIO_000068: ncbigene

position:861281:-1
position: 861281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:908383:-1
position: 908383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:861281-908383:-1:exon

LOC120354253
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354253
product: formin-like protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039441127.1
SIO_010081: LOC120354253
subclass of: SO_0000673
so part of: LOC120354253
location: complement(join(861281..861759,866177..866368,871853..872001,878732..878811,880995..881078,892017..892100,907905..908383))
location: region:861281-908383:-1
so has part: feature:907905-908383:-1:exon
so has part: feature:892017-892100:-1:exon
so has part: feature:880995-881078:-1:exon
so has part: feature:878732-878811:-1:exon
so has part: feature:871853-872001:-1:exon
so has part: feature:866177-866368:-1:exon
so has part: feature:861281-861759:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:907905-908383:-1:exon

position:907905:-1
position: 907905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:892017-892100:-1:exon

position:892017:-1
position: 892017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892100:-1
position: 892100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:880995-881078:-1:exon

position:880995:-1
position: 880995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881078:-1
position: 881078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:878732-878811:-1:exon

position:878732:-1
position: 878732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878811:-1
position: 878811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:871853-872001:-1:exon

position:871853:-1
position: 871853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:872001:-1
position: 872001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:866177-866368:-1:exon

position:866177:-1
position: 866177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866368:-1
position: 866368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:861281-861759:-1:exon

position:861759:-1
position: 861759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354253
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354253
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: formin-like protein
translation: MGGSQSCKNVDPPPVDLPRANTIRCSIRSKLPMPEQTELERRFTKVLASMDLPPDKAKLLKQYDDEKKWGLICDQELVQAKDPPSHYLNNCGHIWIPSIKNYRKRKIVGDATSTQVLRDLEISLRTNHIEWVREFLNEENQGLNSLVNYLSFRLQMMHYEQRSPPSTTASEERITNLVSRTREETAASGRGLQRSVGGHPAWPQVGALQTGGCSQTKSAQTYRQPSTQPHHGRDRAMNSLLITDYLRWDQAYNTVCLYNKLLVSNISTVI
SIO_010081: LOC120354253
subclass of: SO_0000673
so part of: LOC120354253
location: complement(join(861677..861759,866177..866368,871853..872001,878732..878811,880995..881078,892017..892100,907905..908045))
location: region:861677-908045:-1
so has part: feature:907905-908045:-1:exon
so has part: feature:892017-892100:-1:exon
so has part: feature:880995-881078:-1:exon
so has part: feature:878732-878811:-1:exon
so has part: feature:871853-872001:-1:exon
so has part: feature:866177-866368:-1:exon
so has part: feature:861677-861759:-1:exon

XP_039297061.1
type: Protein
SIO_000068: ncbiprotein

position:861677:-1
position: 861677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:908045:-1
position: 908045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:907905-908045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:892017-892100:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:880995-881078:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:878732-878811:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:871853-872001:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:866177-866368:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:861677-861759:-1:exon

LOC120348913
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120348913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(918806..1033518)
location: region:918806-1033518:-1
so has part: feature:918806-1033518:-1:exon
subclass of: SO_0000010

120348913
type: Gene
SIO_000068: ncbigene

position:918806:-1
position: 918806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1033518:-1
position: 1033518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:918806-1033518:-1:exon

LOC120348913
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120348913
product: partitioning defective 3 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 12 long SRA reads, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_039440454.1
SIO_010081: LOC120348913
subclass of: SO_0000673
so part of: LOC120348913
location: complement(join(918806..918945,922072..922342,925319..925434,927341..927997,928778..928964,930842..931095,933244..933338,937161..937438,940831..940961,943502..943599,950318..950476,952668..952821,954904..954976,963672..963874,965846..965926,966409..966489,967848..968045,970002..970184,973770..974235,976591..976788,987703..987861,992177..992430,994416..994513,1002900..1003029,1009488..1009688,1033057..1033518))
location: region:918806-1033518:-1
so has part: feature:1033057-1033518:-1:exon
so has part: feature:1009488-1009688:-1:exon
so has part: feature:1002900-1003029:-1:exon
so has part: feature:994416-994513:-1:exon
so has part: feature:992177-992430:-1:exon
so has part: feature:987703-987861:-1:exon
so has part: feature:976591-976788:-1:exon
so has part: feature:973770-974235:-1:exon
so has part: feature:970002-970184:-1:exon
so has part: feature:967848-968045:-1:exon
so has part: feature:966409-966489:-1:exon
so has part: feature:965846-965926:-1:exon
so has part: feature:963672-963874:-1:exon
so has part: feature:954904-954976:-1:exon
so has part: feature:952668-952821:-1:exon
so has part: feature:950318-950476:-1:exon
so has part: feature:943502-943599:-1:exon
so has part: feature:940831-940961:-1:exon
so has part: feature:937161-937438:-1:exon
so has part: feature:933244-933338:-1:exon
so has part: feature:930842-931095:-1:exon
so has part: feature:928778-928964:-1:exon
so has part: feature:927341-927997:-1:exon
so has part: feature:925319-925434:-1:exon
so has part: feature:922072-922342:-1:exon
so has part: feature:918806-918945:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1033057-1033518:-1:exon

position:1033057:-1
position: 1033057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1009488-1009688:-1:exon

position:1009488:-1
position: 1009488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009688:-1
position: 1009688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1002900-1003029:-1:exon

position:1002900:-1
position: 1002900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003029:-1
position: 1003029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:994416-994513:-1:exon

position:994416:-1
position: 994416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994513:-1
position: 994513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:992177-992430:-1:exon

position:992177:-1
position: 992177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992430:-1
position: 992430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:987703-987861:-1:exon

position:987703:-1
position: 987703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987861:-1
position: 987861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:976591-976788:-1:exon

position:976591:-1
position: 976591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976788:-1
position: 976788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:973770-974235:-1:exon

position:973770:-1
position: 973770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974235:-1
position: 974235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:970002-970184:-1:exon

position:970002:-1
position: 970002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970184:-1
position: 970184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:967848-968045:-1:exon

position:967848:-1
position: 967848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968045:-1
position: 968045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:966409-966489:-1:exon

position:966409:-1
position: 966409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:966489:-1
position: 966489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:965846-965926:-1:exon

position:965846:-1
position: 965846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:965926:-1
position: 965926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:963672-963874:-1:exon

position:963672:-1
position: 963672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:963874:-1
position: 963874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:954904-954976:-1:exon

position:954904:-1
position: 954904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:954976:-1
position: 954976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:952668-952821:-1:exon

position:952668:-1
position: 952668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:952821:-1
position: 952821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:950318-950476:-1:exon

position:950318:-1
position: 950318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:950476:-1
position: 950476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:943502-943599:-1:exon

position:943502:-1
position: 943502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:943599:-1
position: 943599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:940831-940961:-1:exon

position:940831:-1
position: 940831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940961:-1
position: 940961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:937161-937438:-1:exon

position:937161:-1
position: 937161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937438:-1
position: 937438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:933244-933338:-1:exon

position:933244:-1
position: 933244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933338:-1
position: 933338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:930842-931095:-1:exon

position:930842:-1
position: 930842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931095:-1
position: 931095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:928778-928964:-1:exon

position:928778:-1
position: 928778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928964:-1
position: 928964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:927341-927997:-1:exon

position:927341:-1
position: 927341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927997:-1
position: 927997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:925319-925434:-1:exon

position:925319:-1
position: 925319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:925434:-1
position: 925434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:922072-922342:-1:exon

position:922072:-1
position: 922072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922342:-1
position: 922342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:918806-918945:-1:exon

position:918945:-1
position: 918945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120348913
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120348913
product: partitioning defective 3 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 9 long SRA reads, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_039440453.1
SIO_010081: LOC120348913
subclass of: SO_0000673
so part of: LOC120348913
location: complement(join(918806..918945,922072..922342,925319..925434,927341..927997,928778..928964,930842..931095,933244..933338,937161..937438,940831..940961,943502..943599,950318..950476,952668..952821,954904..954976,963672..963874,965846..965926,966409..966489,967848..968045,970002..970184,973770..974235,976591..976788,987703..987861,992177..992430,994416..994513,1002900..1003029,1009488..1009688,1009808..1010247))
location: region:918806-1010247:-1
so has part: feature:1009808-1010247:-1:exon
so has part: feature:1009488-1009688:-1:exon
so has part: feature:1002900-1003029:-1:exon
so has part: feature:994416-994513:-1:exon
so has part: feature:992177-992430:-1:exon
so has part: feature:987703-987861:-1:exon
so has part: feature:976591-976788:-1:exon
so has part: feature:973770-974235:-1:exon
so has part: feature:970002-970184:-1:exon
so has part: feature:967848-968045:-1:exon
so has part: feature:966409-966489:-1:exon
so has part: feature:965846-965926:-1:exon
so has part: feature:963672-963874:-1:exon
so has part: feature:954904-954976:-1:exon
so has part: feature:952668-952821:-1:exon
so has part: feature:950318-950476:-1:exon
so has part: feature:943502-943599:-1:exon
so has part: feature:940831-940961:-1:exon
so has part: feature:937161-937438:-1:exon
so has part: feature:933244-933338:-1:exon
so has part: feature:930842-931095:-1:exon
so has part: feature:928778-928964:-1:exon
so has part: feature:927341-927997:-1:exon
so has part: feature:925319-925434:-1:exon
so has part: feature:922072-922342:-1:exon
so has part: feature:918806-918945:-1:exon

position:1010247:-1
position: 1010247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1009808-1010247:-1:exon

position:1009808:-1
position: 1009808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1009488-1009688:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1002900-1003029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:994416-994513:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:992177-992430:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:987703-987861:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976591-976788:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:973770-974235:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:970002-970184:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:967848-968045:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:966409-966489:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:965846-965926:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:963672-963874:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:954904-954976:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:952668-952821:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:950318-950476:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:943502-943599:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:940831-940961:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:937161-937438:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:933244-933338:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:930842-931095:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:928778-928964:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:927341-927997:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:925319-925434:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:922072-922342:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:918806-918945:-1:exon

LOC120348913
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120348913
product: partitioning defective 3 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 9 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_039440455.1
SIO_010081: LOC120348913
subclass of: SO_0000673
so part of: LOC120348913
location: complement(join(918806..918945,922072..922342,925319..925434,927341..927997,928778..928964,930842..931095,933244..933338,937161..937438,940831..940961,943502..943599,950318..950476,952668..952821,954904..954976,963672..963874,965846..965926,966409..966489,967848..968045,970002..970184,973770..973969,974069..974235,976591..976788,987703..987861,992177..992430,994416..994513,1002900..1003029,1009488..1009688,1009808..1010246))
location: region:918806-1010246:-1
so has part: feature:1009808-1010246:-1:exon
so has part: feature:1009488-1009688:-1:exon
so has part: feature:1002900-1003029:-1:exon
so has part: feature:994416-994513:-1:exon
so has part: feature:992177-992430:-1:exon
so has part: feature:987703-987861:-1:exon
so has part: feature:976591-976788:-1:exon
so has part: feature:974069-974235:-1:exon
so has part: feature:973770-973969:-1:exon
so has part: feature:970002-970184:-1:exon
so has part: feature:967848-968045:-1:exon
so has part: feature:966409-966489:-1:exon
so has part: feature:965846-965926:-1:exon
so has part: feature:963672-963874:-1:exon
so has part: feature:954904-954976:-1:exon
so has part: feature:952668-952821:-1:exon
so has part: feature:950318-950476:-1:exon
so has part: feature:943502-943599:-1:exon
so has part: feature:940831-940961:-1:exon
so has part: feature:937161-937438:-1:exon
so has part: feature:933244-933338:-1:exon
so has part: feature:930842-931095:-1:exon
so has part: feature:928778-928964:-1:exon
so has part: feature:927341-927997:-1:exon
so has part: feature:925319-925434:-1:exon
so has part: feature:922072-922342:-1:exon
so has part: feature:918806-918945:-1:exon

position:1010246:-1
position: 1010246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1009808-1010246:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1009488-1009688:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1002900-1003029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:994416-994513:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:992177-992430:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:987703-987861:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976591-976788:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:974069-974235:-1:exon

position:974069:-1
position: 974069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:973770-973969:-1:exon

position:973969:-1
position: 973969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:970002-970184:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:967848-968045:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:966409-966489:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:965846-965926:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:963672-963874:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:954904-954976:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:952668-952821:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:950318-950476:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:943502-943599:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:940831-940961:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:937161-937438:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:933244-933338:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:930842-931095:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:928778-928964:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:927341-927997:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:925319-925434:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:922072-922342:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:918806-918945:-1:exon

LOC120348913
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120348913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: partitioning defective 3 homolog isoform X2
translation: MKVTVCFGPVRVVVPCGDGDLLIKDLTRQAIHRYKKAVGKCASSDVVVHSLHSVDGGILDPDDRLSDVADDREQLVATFVPHPHQPGDGASNSSRGTPSPDHIIYHQVEGDGKTAAIEVRECDLLDQPAHISSLQVRRGSEPALNHLQDNAPNGRAGNSNSNAKRWSAAPVITESTKLNNLHKDDDRCGLTNGHNTDKWRDMDEELEEEEDEEEEEEEELMNGGGGRAGRGGSRRRNGWLRGGGGGGAPFARDGSNRLSMQFLGESPTGLRWADAADRASKAGNSLSLPREASHRDARIRKEPLGQANSAPTSDQQPPSERWELICLSTESGALGIHVVPDVVGGGGGLVVQAVEEGGRVDRDGRLKRGDRITQINGRSLIDQPFHVVQDIFRESLRSSELRLRVVKPGGGERERIEGGGRERIDGRGGERMEGGGGGRERIDGRGGERMEGGGGGRERIDGRGGERMEGGRERTDGRGGGEAGGKKQPPPPVYPKPPPPNGRMGGGSGREGGNKENQIGENGTVKEKLSMKGMKENNGIQQVRKQPVVGMVGALQTGNTRRIGRKIEVQLVKGVHGLGFSITTRDNPAGGNCPIYIKNILPKGAAVEDGRLRPGDRLLAVDGCQLTGKTQAEAVALLRQVPANATCLITVSRHDPNEKDTTNTNSSSMEVGQNPSKHQQRPVEVKSNKSANHSNQDSNSSGGSVHSKRVNDSKNSSSHSSNQDDSTNDSHSNLWKQKEIVTLYIPVHDTEKAGLGVSVKGKTSGGGGNSSPTTDLGIFIKNVLHGGAASRDGRLRTNDQLLSVNGITLSGLSNQAAMETLRRAMLRTEGPVEGSIVLTVARRIQGAGSKDTPRRGSVSSLLTDSSANTETFGSSNGNNGGVDVQNNSGNSEASDSTVICLPTSTQHSSNSNSTQRSNNDGVVMRNAVLERLTGQTSLPPGMGGLHNESYYRATHQTTLLSLGSNPETGGKLTSPTVNQPARETLIIEDDSSFLPSGDTSLGAIRPLAAMKPSRTDSTSTSSQADATYASQLSLDSGMQVGAGAGASATGFSRDAFGRQSMSEKRHATLDAKNTDTYRRTKRARELRQAEGEDMDRSQLGPSLGMKKSSSLESLQTMVQEMQMYEDIDRVYPPALVPPVGGVIRGGRGCNESFRAAVDRSYEAPVGGPDLGGVGGHLNRRQTSLDSKLKAKKRQSLLRGLGSMFRFGKHRKAGDDGEEENEEGRGGTEGEGGIGGGGVEEVEYDEHQQQVIQEQLRRLMVAAASTQPSREAGVDIGGSGRGGNPSMMTSSSSLQHPSSDVTRGNAMMTSSGGQLPQPSSEYAGSATASSEHTGSRTLGSEFMGSRTSGSELSGSRTYGNELTGSRTSSNDMGGSRTTGSDIVGSRTYGNELTGSRTYGNELTGSRTSGNEMSGSRTLGNELTGSRTTGSDMGGSRTSGNDVTGSNDVTRTERIQQLRAHHQLRHQERRGHYPLDDTEERYEMALRQRLEQQQDSAINRPGSRVAITDPARFSHYVNYQQIQHHLNRRQQHYHSQRREATSSRSGGGMGDHPGNSAHPVPCPTSTSTRASSRTF
SIO_010081: LOC120348913
subclass of: SO_0000673
so part of: LOC120348913
location: complement(join(922195..922342,925319..925434,927341..927997,928778..928964,930842..931095,933244..933338,937161..937438,940831..940961,943502..943599,950318..950476,952668..952821,954904..954976,963672..963874,965846..965926,966409..966489,967848..968045,970002..970184,973770..974235,976591..976788,987703..987861,992177..992430,994416..994513,1002900..1003029,1009488..1009688,1033057..1033176))
location: region:922195-1033176:-1
so has part: feature:1033057-1033176:-1:exon
so has part: feature:1009488-1009688:-1:exon
so has part: feature:1002900-1003029:-1:exon
so has part: feature:994416-994513:-1:exon
so has part: feature:992177-992430:-1:exon
so has part: feature:987703-987861:-1:exon
so has part: feature:976591-976788:-1:exon
so has part: feature:973770-974235:-1:exon
so has part: feature:970002-970184:-1:exon
so has part: feature:967848-968045:-1:exon
so has part: feature:966409-966489:-1:exon
so has part: feature:965846-965926:-1:exon
so has part: feature:963672-963874:-1:exon
so has part: feature:954904-954976:-1:exon
so has part: feature:952668-952821:-1:exon
so has part: feature:950318-950476:-1:exon
so has part: feature:943502-943599:-1:exon
so has part: feature:940831-940961:-1:exon
so has part: feature:937161-937438:-1:exon
so has part: feature:933244-933338:-1:exon
so has part: feature:930842-931095:-1:exon
so has part: feature:928778-928964:-1:exon
so has part: feature:927341-927997:-1:exon
so has part: feature:925319-925434:-1:exon
so has part: feature:922195-922342:-1:exon

XP_039296388.1
type: Protein
SIO_000068: ncbiprotein

position:922195:-1
position: 922195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1033176:-1
position: 1033176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1033057-1033176:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1009488-1009688:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1002900-1003029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:994416-994513:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:992177-992430:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:987703-987861:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976591-976788:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:973770-974235:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:970002-970184:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:967848-968045:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:966409-966489:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:965846-965926:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:963672-963874:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:954904-954976:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:952668-952821:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:950318-950476:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:943502-943599:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:940831-940961:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:937161-937438:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:933244-933338:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:930842-931095:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:928778-928964:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:927341-927997:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:925319-925434:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:922195-922342:-1:exon

LOC120348913
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120348913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: partitioning defective 3 homolog isoform X3
translation: MLGGKLLFGWRRQKYDVQRLQQANQLQFVGASNASASKTAPTCASSDVVVHSLHSVDGGILDPDDRLSDVADDREQLVATFVPHPHQPGDGASNSSRGTPSPDHIIYHQVEGDGKTAAIEVRECDLLDQPAHISSLQVRRGSEPALNHLQDNAPNGRAGNSNSNAKRWSAAPVITESTKLNNLHKDDDRCGLTNGHNTDKWRDMDEELEEEEDEEEEEEEELMNGGGGRAGRGGSRRRNGWLRGGGGGGAPFARDGSNRLSMQFLGESPTGLRWADAADRASKAGNSLSLPREASHRDARIRKEPLGQANSAPTSDQQPPSERWELICLSTESGALGIHVVPDVVGGGGGLVVQAVEEGGRVDRDGRLKRGDRITQINGRSLIDQPFHVVQDIFRESLRSSELRLRVVKPGGGERERIEGGGRERIDGRGGERMEGGGGGRERIDGRGGGEAGGKKQPPPPVYPKPPPPNGRMGGGSGREGGNKENQIGENGTVKEKLSMKGMKENNGIQQVRKQPVVGMVGALQTGNTRRIGRKIEVQLVKGVHGLGFSITTRDNPAGGNCPIYIKNILPKGAAVEDGRLRPGDRLLAVDGCQLTGKTQAEAVALLRQVPANATCLITVSRHDPNEKDTTNTNSSSMEVGQNPSKHQQRPVEVKSNKSANHSNQDSNSSGGSVHSKRVNDSKNSSSHSSNQDDSTNDSHSNLWKQKEIVTLYIPVHDTEKAGLGVSVKGKTSGGGGNSSPTTDLGIFIKNVLHGGAASRDGRLRTNDQLLSVNGITLSGLSNQAAMETLRRAMLRTEGPVEGSIVLTVARRIQGAGSKDTPRRGSVSSLLTDSSANTETFGSSNGNNGGVDVQNNSGNSEASDSTVICLPTSTQHSSNSNSTQRSNNDGVVMRNAVLERLTGQTSLPPGMGGLHNESYYRATHQTTLLSLGSNPETGGKLTSPTVNQPARETLIIEDDSSFLPSGDTSLGAIRPLAAMKPSRTDSTSTSSQADATYASQLSLDSGMQVGAGAGASATGFSRDAFGRQSMSEKRHATLDAKNTDTYRRTKRARELRQAEGEDMDRSQLGPSLGMKKSSSLESLQTMVQEMQMYEDIDRVYPPALVPPVGGVIRGGRGCNESFRAAVDRSYEAPVGGPDLGGVGGHLNRRQTSLDSKLKAKKRQSLLRGLGSMFRFGKHRKAGDDGEEENEEGRGGTEGEGGIGGGGVEEVEYDEHQQQVIQEQLRRLMVAAASTQPSREAGVDIGGSGRGGNPSMMTSSSSLQHPSSDVTRGNAMMTSSGGQLPQPSSEYAGSATASSEHTGSRTLGSEFMGSRTSGSELSGSRTYGNELTGSRTSSNDMGGSRTTGSDIVGSRTYGNELTGSRTYGNELTGSRTSGNEMSGSRTLGNELTGSRTTGSDMGGSRTSGNDVTGSNDVTRTERIQQLRAHHQLRHQERRGHYPLDDTEERYEMALRQRLEQQQDSAINRPGSRVAITDPARFSHYVNYQQIQHHLNRRQQHYHSQRREATSSRSGGGMGDHPGNSAHPVPCPTSTSTRASSRTF
SIO_010081: LOC120348913
subclass of: SO_0000673
so part of: LOC120348913
location: complement(join(922195..922342,925319..925434,927341..927997,928778..928964,930842..931095,933244..933338,937161..937438,940831..940961,943502..943599,950318..950476,952668..952821,954904..954976,963672..963874,965846..965926,966409..966489,967848..968045,970002..970184,973770..973969,974069..974235,976591..976788,987703..987861,992177..992430,994416..994513,1002900..1003029,1009488..1009688,1009808..1009933))
location: region:922195-1009933:-1
so has part: feature:1009808-1009933:-1:exon
so has part: feature:1009488-1009688:-1:exon
so has part: feature:1002900-1003029:-1:exon
so has part: feature:994416-994513:-1:exon
so has part: feature:992177-992430:-1:exon
so has part: feature:987703-987861:-1:exon
so has part: feature:976591-976788:-1:exon
so has part: feature:974069-974235:-1:exon
so has part: feature:973770-973969:-1:exon
so has part: feature:970002-970184:-1:exon
so has part: feature:967848-968045:-1:exon
so has part: feature:966409-966489:-1:exon
so has part: feature:965846-965926:-1:exon
so has part: feature:963672-963874:-1:exon
so has part: feature:954904-954976:-1:exon
so has part: feature:952668-952821:-1:exon
so has part: feature:950318-950476:-1:exon
so has part: feature:943502-943599:-1:exon
so has part: feature:940831-940961:-1:exon
so has part: feature:937161-937438:-1:exon
so has part: feature:933244-933338:-1:exon
so has part: feature:930842-931095:-1:exon
so has part: feature:928778-928964:-1:exon
so has part: feature:927341-927997:-1:exon
so has part: feature:925319-925434:-1:exon
so has part: feature:922195-922342:-1:exon

XP_039296389.1
type: Protein
SIO_000068: ncbiprotein

position:1009933:-1
position: 1009933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1009808-1009933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1009488-1009688:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1002900-1003029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:994416-994513:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:992177-992430:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:987703-987861:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976591-976788:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:974069-974235:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:973770-973969:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:970002-970184:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:967848-968045:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:966409-966489:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:965846-965926:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:963672-963874:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:954904-954976:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:952668-952821:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:950318-950476:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:943502-943599:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:940831-940961:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:937161-937438:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:933244-933338:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:930842-931095:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:928778-928964:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:927341-927997:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:925319-925434:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:922195-922342:-1:exon

LOC120348913
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120348913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: partitioning defective 3 homolog isoform X1
translation: MLGGKLLFGWRRQKYDVQRLQQANQLQFVGASNASASKTAPTCASSDVVVHSLHSVDGGILDPDDRLSDVADDREQLVATFVPHPHQPGDGASNSSRGTPSPDHIIYHQVEGDGKTAAIEVRECDLLDQPAHISSLQVRRGSEPALNHLQDNAPNGRAGNSNSNAKRWSAAPVITESTKLNNLHKDDDRCGLTNGHNTDKWRDMDEELEEEEDEEEEEEEELMNGGGGRAGRGGSRRRNGWLRGGGGGGAPFARDGSNRLSMQFLGESPTGLRWADAADRASKAGNSLSLPREASHRDARIRKEPLGQANSAPTSDQQPPSERWELICLSTESGALGIHVVPDVVGGGGGLVVQAVEEGGRVDRDGRLKRGDRITQINGRSLIDQPFHVVQDIFRESLRSSELRLRVVKPGGGERERIEGGGRERIDGRGGERMEGGGGGRERIDGRGGERMEGGGGGRERIDGRGGERMEGGRERTDGRGGGEAGGKKQPPPPVYPKPPPPNGRMGGGSGREGGNKENQIGENGTVKEKLSMKGMKENNGIQQVRKQPVVGMVGALQTGNTRRIGRKIEVQLVKGVHGLGFSITTRDNPAGGNCPIYIKNILPKGAAVEDGRLRPGDRLLAVDGCQLTGKTQAEAVALLRQVPANATCLITVSRHDPNEKDTTNTNSSSMEVGQNPSKHQQRPVEVKSNKSANHSNQDSNSSGGSVHSKRVNDSKNSSSHSSNQDDSTNDSHSNLWKQKEIVTLYIPVHDTEKAGLGVSVKGKTSGGGGNSSPTTDLGIFIKNVLHGGAASRDGRLRTNDQLLSVNGITLSGLSNQAAMETLRRAMLRTEGPVEGSIVLTVARRIQGAGSKDTPRRGSVSSLLTDSSANTETFGSSNGNNGGVDVQNNSGNSEASDSTVICLPTSTQHSSNSNSTQRSNNDGVVMRNAVLERLTGQTSLPPGMGGLHNESYYRATHQTTLLSLGSNPETGGKLTSPTVNQPARETLIIEDDSSFLPSGDTSLGAIRPLAAMKPSRTDSTSTSSQADATYASQLSLDSGMQVGAGAGASATGFSRDAFGRQSMSEKRHATLDAKNTDTYRRTKRARELRQAEGEDMDRSQLGPSLGMKKSSSLESLQTMVQEMQMYEDIDRVYPPALVPPVGGVIRGGRGCNESFRAAVDRSYEAPVGGPDLGGVGGHLNRRQTSLDSKLKAKKRQSLLRGLGSMFRFGKHRKAGDDGEEENEEGRGGTEGEGGIGGGGVEEVEYDEHQQQVIQEQLRRLMVAAASTQPSREAGVDIGGSGRGGNPSMMTSSSSLQHPSSDVTRGNAMMTSSGGQLPQPSSEYAGSATASSEHTGSRTLGSEFMGSRTSGSELSGSRTYGNELTGSRTSSNDMGGSRTTGSDIVGSRTYGNELTGSRTYGNELTGSRTSGNEMSGSRTLGNELTGSRTTGSDMGGSRTSGNDVTGSNDVTRTERIQQLRAHHQLRHQERRGHYPLDDTEERYEMALRQRLEQQQDSAINRPGSRVAITDPARFSHYVNYQQIQHHLNRRQQHYHSQRREATSSRSGGGMGDHPGNSAHPVPCPTSTSTRASSRTF
SIO_010081: LOC120348913
subclass of: SO_0000673
so part of: LOC120348913
location: complement(join(922195..922342,925319..925434,927341..927997,928778..928964,930842..931095,933244..933338,937161..937438,940831..940961,943502..943599,950318..950476,952668..952821,954904..954976,963672..963874,965846..965926,966409..966489,967848..968045,970002..970184,973770..974235,976591..976788,987703..987861,992177..992430,994416..994513,1002900..1003029,1009488..1009688,1009808..1009933))
location: region:922195-1009933:-1
so has part: feature:1009808-1009933:-1:exon
so has part: feature:1009488-1009688:-1:exon
so has part: feature:1002900-1003029:-1:exon
so has part: feature:994416-994513:-1:exon
so has part: feature:992177-992430:-1:exon
so has part: feature:987703-987861:-1:exon
so has part: feature:976591-976788:-1:exon
so has part: feature:973770-974235:-1:exon
so has part: feature:970002-970184:-1:exon
so has part: feature:967848-968045:-1:exon
so has part: feature:966409-966489:-1:exon
so has part: feature:965846-965926:-1:exon
so has part: feature:963672-963874:-1:exon
so has part: feature:954904-954976:-1:exon
so has part: feature:952668-952821:-1:exon
so has part: feature:950318-950476:-1:exon
so has part: feature:943502-943599:-1:exon
so has part: feature:940831-940961:-1:exon
so has part: feature:937161-937438:-1:exon
so has part: feature:933244-933338:-1:exon
so has part: feature:930842-931095:-1:exon
so has part: feature:928778-928964:-1:exon
so has part: feature:927341-927997:-1:exon
so has part: feature:925319-925434:-1:exon
so has part: feature:922195-922342:-1:exon

XP_039296387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1009808-1009933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1009488-1009688:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1002900-1003029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:994416-994513:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:992177-992430:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:987703-987861:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976591-976788:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:973770-974235:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:970002-970184:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:967848-968045:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:966409-966489:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:965846-965926:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:963672-963874:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:954904-954976:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:952668-952821:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:950318-950476:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:943502-943599:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:940831-940961:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:937161-937438:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:933244-933338:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:930842-931095:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:928778-928964:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:927341-927997:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:925319-925434:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:922195-922342:-1:exon

LOC120354138
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(956120..957974)
location: region:956120-957974:-1
so has part: feature:956120-957974:-1:exon
subclass of: SO_0000010

120354138
type: Gene
SIO_000068: ncbigene

position:956120:-1
position: 956120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:957974:-1
position: 957974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:956120-957974:-1:exon

LOC120354138
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354138
product: uncharacterized LOC120354138
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039440456.1
SIO_010081: LOC120354138
subclass of: SO_0000673
so part of: LOC120354138
location: complement(join(956120..957522,957848..957974))
location: region:956120-957974:-1
so has part: feature:957848-957974:-1:exon
so has part: feature:956120-957522:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:957848-957974:-1:exon

position:957848:-1
position: 957848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:956120-957522:-1:exon

position:957522:-1
position: 957522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354138
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120354138
translation: MSKIDRHALFYKLTEIGVSQKMLNTLKKLYEGSTSRVWGQEGLSGKFETGAGVKQGCLLSPLLFSLFINDLEEYLDGGISVGGICIKLLAYADDIVLLAPDRVSMRRMIANLETYCERWNLQVNLQKSEIMIFRRGGRISRHDAWRYNNEPIKVVGSYKYLGVNLSSQLSLSRHFKEKASAAKISLNVFNGLLAQNNIQFKQKLDVFEAVSRSIICYGAQVWGGRMVDVVEKVQRLFLKKVFNLPLWAPDYCLFLETGVSPLLVHTLKLHLKYVHRCLSLPDHRYPCILMKKVIEKKIFIYNDWLELQTVFGIPASSIPSCNVLAVVNRVKEGLSESFGRRRMRSQRCSIYPELANFTDYIHHQGDFTLVKWFLKARTELIRLNKYSFSQAVKICSLCNMKEEEDVPHFIARCPILSEIRRRQLNNSILTTQELRSRLNGQDWEAVGRYCKEAWQYRYSLVQEYNF
SIO_010081: LOC120354138
subclass of: SO_0000673
so part of: LOC120354138
location: complement(join(956128..957522,957848..957853))
location: region:956128-957853:-1
so has part: feature:957848-957853:-1:exon
so has part: feature:956128-957522:-1:exon

XP_039296390.1
type: Protein
SIO_000068: ncbiprotein

position:956128:-1
position: 956128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:957853:-1
position: 957853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:957848-957853:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:956128-957522:-1:exon

Trnai-aau
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: Trnai-aau
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1022470..1022543)
location: region:1022470-1022543:-1
so has part: feature:1022470-1022543:-1:exon
subclass of: SO_0000663

111053774
type: Gene
SIO_000068: ncbigene

position:1022470:-1
position: 1022470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022543:-1
position: 1022543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1022470-1022543:-1:exon

Trnai-aau
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 108931
gene: Trnai-aau
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1022507..1022509),aa:Ile, seq:aat)
SIO_010081: Trnai-aau
subclass of: SO_0000673
so part of: Trnai-aau
location: complement(1022470..1022543)
location: region:1022470-1022543:-1
so has part: feature:1022470-1022543:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1022470-1022543:-1:exon

LOC111053769
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111053769
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1074017..1075487)
location: region:1074017-1075487:-1
so has part: feature:1074017-1075487:-1:exon
subclass of: SO_0000010

111053769
type: Gene
SIO_000068: ncbigene

position:1074017:-1
position: 1074017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075487:-1
position: 1075487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1074017-1075487:-1:exon

LOC111053769
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111053769
product: mRNA-decapping enzyme 1B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039440457.1
SIO_010081: LOC111053769
subclass of: SO_0000673
so part of: LOC111053769
location: complement(1074017..1075487)
location: region:1074017-1075487:-1
so has part: feature:1074017-1075487:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1074017-1075487:-1:exon

LOC111053769
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111053769
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mRNA-decapping enzyme 1B
translation: MAEQSAEARMNTAALKRADPYLKELLETAAHVALYTFNPDVNEWEKTEVEGALFVYSRTGEPFHNILIMNRLNCKNFVEPVIRGLDLHLEDPYLLYRTPKGSIYCVWFYDKRECSRIGQALDRLVKETTLNSSSTAVDKTQTKKGEGIDIFSMLSKAQEEYNSASSKDGNGNKPEDNTPKSVKDFFMKASSSTAWSSAQQNPPEVVPAPRGAAAPLAPPPGLTQIPAQEPPVFPSLEKLLLDPQNSLQHIENKLQKTTSPQPIQNGGGLVSPTSNVVQTLNFFNSNLTKSYLKMAEDGKLVMPQPAMFPNQPAMFPSNSLMTSQVQTPSEMQPLTKTQLLQALEYLMNNDDEFIPMLHAAYVKSLTRKTS
SIO_010081: LOC111053769
subclass of: SO_0000673
so part of: LOC111053769
location: complement(1074241..1075353)
location: region:1074241-1075353:-1
so has part: feature:1074241-1075353:-1:exon

XP_039296391.1
type: Protein
SIO_000068: ncbiprotein

position:1074241:-1
position: 1074241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075353:-1
position: 1075353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1074241-1075353:-1:exon

LOC120354139
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354139
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1077468..1093502
location: region:1077468-1093502:1
so has part: feature:1077468-1093502:1:exon
subclass of: SO_0000010

120354139
type: Gene
SIO_000068: ncbigene

position:1077468:1
position: 1077468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1093502:1
position: 1093502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1077468-1093502:1:exon

LOC120354139
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354139
product: mucin-22-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_039440458.1
SIO_010081: LOC120354139
subclass of: SO_0000673
so part of: LOC120354139
location: join(1077468..1077608,1082395..1082606,1084944..1085171,1089223..1093502)
location: region:1077468-1093502:1
so has part: feature:1077468-1077608:1:exon
so has part: feature:1082395-1082606:1:exon
so has part: feature:1084944-1085171:1:exon
so has part: feature:1089223-1093502:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1077468-1077608:1:exon

position:1077608:1
position: 1077608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1082395-1082606:1:exon

position:1082395:1
position: 1082395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082606:1
position: 1082606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1084944-1085171:1:exon

position:1084944:1
position: 1084944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1085171:1
position: 1085171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1089223-1093502:1:exon

position:1089223:1
position: 1089223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120354139
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354139
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucin-22-like
translation: MKVKKKEKIKRKQETIKNREWERERRGKLNVAFCQLDQLLPDYDPSRVRSKLAILMAAVGHITHLHQLMHTLSAGKGGATERDTVFASELARLHDRIDTLRRRCQQLAQLLQMADIPVPAPSNDKLATLPTGGKLATSQPHIKWNGNIAHKTVQQRIINSRKDKAEKKENNQLLEVGSTVASKNPPNSKTSSITEVSEDVEQPSTPSDSPELSPIKKVVDLCNTPLRELTGFTLNSACVLASSSTSPPPHTHPSSSPSSSISSPSSSLSSNSPLCPGEILETPVAKNDGQCLVGDAAIGEPGEMTSYVANETSDVTSSRNVVAMETNDMMSSRNMVAMETSDMTSSRNVVAMETKEMTSSRDVVAMETNDMMSSRNVVAMETSDMTSSRNVVAVETSDMTSSRNVVAMETKDMMSSSTENGQDPSKYPIGLDSGGGGKVCDQLATTSQSVTGNEDSSEVTDNPKSLVAVTPGTVADTRTTVAVTPSTAAVTSTSISSTSSLEAASKSIEVPLQPNSSQSNPAVAVTTPKVAATPSSSGLATSNSVEVPTQPNSSSGNSTVTEVQNKETSRAKSDNSQGKPATSAGNSSIPKPVTAKTVTVTTAGNSSNPIPATTKPVTVTTTGNTPNQIPVTGTVHVVNPYPSIMPVTVTNFGAPTVNQSIMIVLPDGRVVTVPQQQPQYVINQSVPHMINQSVPQIINHQSPTTIVIGNSAPVIEPIVFKAADRMAVNRAFEADGTTVNRAGKKGQQKRVLLSKCANKVPIPLVGTQFVVRRTVEMQVKASRVVEKRQRSRKVKKTVVSAESAKVKDVTKVAEFVEVPKTTQVENAKVDRVEEGLKPSDGKNTTNICRNKSVMNKVGMGEQETNKDKSVVKSNGRIEQDNGKKTEISRNESVLDKDGMNRKMNNDQTQSLEKSVVNNTSSVGALGNNNNSTSQRLENKSSPTKVLGGNTSSTEVLENNTSTTKVLESLRGPEALSANPDNMITARTETPGDSIELTDQDLDMTTLTDTGTGVEGSTSDKTSSVRIEEGESSKAIKEMDDSSRNLKLASGFKTVQGKSEDGGCNSVVVSSSTKLIDKNCSVEVSIGDKKKQEVVDSVKKVQEDKACSSMKVVVSDSRKQKVVEDFEKGNENQNQSLVAEQGTHPDVNKHDNVLNVGNNDDDDCNDHFGLDTMSDDNDDTENDGPIPSLLVDMPQIKRPADGSVMPPAKKLKTLDQQNLSDAPDKDSMHGHVFHQDNNSIMASVEGPVNNNIEDVQMITGSTDIPHQETPDPSCSQVEIRRQSNTNIGQKLELPTNRNCSSNYGVEKTVMYPNENKDCPVVNQQQGIASSVSNPVEMKLVGKRCEETVESTVLGIGNTLKNPVNHQPHLENVAKNKETLSDKCYTGNLVGQNITDNQTQLQKTNTSASMLLLPEAASDKLPDSYQTGNVSENNTVLDVQNSRMEHYLGSINQKGSQLLGFPDNSSHRDAIKDITPTSYPYISSVNPTNDNLALQKVSNFNISSTINTNMSYLSMTTNSARETVQSKNTEDDFGRNPSFSENGMIPSHVVNKVSGRLEENSTVAKETAVKMQTSNQNVKKNGDSFVEQH
SIO_010081: LOC120354139
subclass of: SO_0000673
so part of: LOC120354139
location: join(1077562..1077608,1082395..1082606,1084944..1085171,1089223..1093499)
location: region:1077562-1093499:1
so has part: feature:1077562-1077608:1:exon
so has part: feature:1082395-1082606:1:exon
so has part: feature:1084944-1085171:1:exon
so has part: feature:1089223-1093499:1:exon

XP_039296392.1
type: Protein
SIO_000068: ncbiprotein

position:1077562:1
position: 1077562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1093499:1
position: 1093499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1077562-1077608:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1082395-1082606:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084944-1085171:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1089223-1093499:1:exon

LOC111053772
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111053772
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1094618..1103394
location: region:1094618-1103394:1
so has part: feature:1094618-1103394:1:exon
subclass of: SO_0000010

111053772
type: Gene
SIO_000068: ncbigene

position:1094618:1
position: 1094618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103394:1
position: 1103394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1094618-1103394:1:exon

LOC111053772
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111053772
product: serine-rich adhesin for platelets
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_022340699.2
SIO_010081: LOC111053772
subclass of: SO_0000673
so part of: LOC111053772
location: join(1094618..1100427,1102755..1103394)
location: region:1094618-1103394:1
so has part: feature:1094618-1100427:1:exon
so has part: feature:1102755-1103394:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1094618-1100427:1:exon

position:1100427:1
position: 1100427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1102755-1103394:1:exon

position:1102755:1
position: 1102755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111053772
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111053772
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine-rich adhesin for platelets
translation: MTNPNKNTRKVVKKTVSQQTDDISKGPMIGSSANVGKTCVRKMAASFKMKSTSSCQTVDLETTINPVTKYPQSYGRGAMQNRRKATNFQVGYNVAQNTMKVGNSGGVSNMVQKSNKQVGNIGVTNTKKSTGTSVTVDGSLLQNNQTNMDMMASTSIQNASDMFQHSKPTDNPTTSTQNTLVPFQHSKPPENQANPLMTQDSLVPFQHSKPSEKQTVLFPSKNHPPKNDKKQDFKSVQQKEKNNTFLDDIRLVLPNSDFSNDIFSTLQVPPGSQHHGSLSPTAAFLDAFPLVSNSKNSEMLIDGDNSDAVHHATDSLLLGDPNILDTSGRQNCLQTLNNYNSVEQHLAMNTDEMTKNPCNKNMNSIHTDQNKANNAMPNQQQTSSAYSISALNSAKPSNSLGEKCADHTNKIQDYQSHYTNVNYDYMSANSFQNYNYNSGYKKVAPKFVDSNYGGDINNSFVSNPRDVNNKMAATTYGSQDGGLGYNAYNNWNPKPSMQLQNFDDFQTNYMSGYNHFPTSSASKNVFASDQSYSTSAGMFGNLSSYKSMDTSDSNFVSQPVASSTKLGSKSDAPANFIYTQASTTSNPITTRSYSCAFSSASDFQAIGFPQSLYSSSTIEDSLSTAPKVTSSKDLMGVDQCGSIVTSQAAQTKSVNTSKSNNSSIGNKFYVGGNPMNKKQPVMFDNASIKTSQTAGMDQGATSNATSSKSSTYFPDLGMNQNNSNSVMSKSSSYFPPSLSTTLNNSFNNSTMLFPAQSTYQNTNIFTTITNQTAGIFSSTTATTHANQTVGIFSSGATTQVNQSVGIFSSGATTQANQSVFTFSSGATTSTTTTPANGKVGSSSETVKTSQPRMSVNWMTMPDPRTSTLEVGSSSTASAPFIPPDRMFTPHKDALDFIAPIITGGLQPTYSTNSQMFYGMDFPISDAQTLCGTDGSITRTTANPQAQTSSSSALHYSWPTSKSSLSLLSHLDNHGLGIPSTLPTLVGDLALGTNTGPSTPGVNGDYRMSSNTTATIFQTLPEVEDRNNQKSLNNTTDVSPVKSSNYCQDNMQPKSALFSTDMPSSKSANYLQAPSKPSNIFDVQSKPSNIFDVQSKLPETPAKSSNFHLDMPTKSSSYSLDVQPKSSAPFSTEVPTSKSSNFLQASSKPSNIFDVQSKTNTSAKPSNFHFNMSGKPSNYMNASSKPSNIFDMNVTSKPSSTFDLNVSSKPSNTFDVTASSNIFDMHSKPSSNFLDTPSKPTNFAMGNPQSHATSAQFDAKSSKNPAPNQGQRSGVVADTSKTSSGPNVSHQQPQSGGSSFLSVSQLVDQVKTNKKQDGNNYKYVQNIMAPDIYYPEITAGSNSAKQVDYKCNTMPMPQKGSTTNSQPLINAKNTYNPQNRDGYSLLSTEGSQKQNLLTFDSATSNQKQNLLSSDGATKNQKQNMLPFDGNATTNQKPKDPSAMQQKSVANSTTRKCEINLQNNNFNDTGLSFLAPSSSTLVAKNSTIPSVAKSSTGSTPVSLPTSLWSQSSSHNVNSCSTATKKNERFPLTKSSSTFKSSNKYSAESLISNVQDGASAASVDQFSSVTSLNYGTCFEMAGHNSSDLPSFGVSTSNLFGATEYHHGSDYGSNQPIPSYQNYFGQTLDNLQPTGTASTTFLAESAADFQMNLFDSTAPPSYLFPPALNKKSANVEAKSNVKPNPKPANNLIPTSLYSSTVVDPKPNQKLDNSLTPASTAVLYPSNTEPKPNLKPDNNLIPASKGVFYPSNVEAKPNLKPDNNLIPASSRVFYQTTTMSSPTTNQGCQKSNSNFPLAAKSNSNFPPAAKSNSNFPPAVKSNSNYPPAAKSNSNFPPAAKSNSNFLPAANCNSSAANLTASSSSTNSLANFNMSTIFPEMNDKVDPAVAQQHHINQQQKQQQTTTVSQQQTATTTTNR
SIO_010081: LOC111053772
subclass of: SO_0000673
so part of: LOC111053772
location: join(1094794..1100427,1102755..1102862)
location: region:1094794-1102862:1
so has part: feature:1094794-1100427:1:exon
so has part: feature:1102755-1102862:1:exon

XP_022196391.2
type: Protein
SIO_000068: ncbiprotein

position:1094794:1
position: 1094794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1102862:1
position: 1102862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1094794-1100427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102755-1102862:1:exon

LOC120354254
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354254
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1117292..1133217)
location: region:1117292-1133217:-1
so has part: feature:1117292-1133217:-1:exon
subclass of: SO_0000010

120354254
type: Gene
SIO_000068: ncbigene

position:1117292:-1
position: 1117292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1133217:-1
position: 1133217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1117292-1133217:-1:exon

LOC120354254
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354254
product: 5-hydroxytryptamine receptor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_039441128.1
SIO_010081: LOC120354254
subclass of: SO_0000673
so part of: LOC120354254
location: complement(join(1117292..1117561,1120378..1120691,1121637..1121856,1122775..1122928,1133186..1133217))
location: region:1117292-1133217:-1
so has part: feature:1133186-1133217:-1:exon
so has part: feature:1122775-1122928:-1:exon
so has part: feature:1121637-1121856:-1:exon
so has part: feature:1120378-1120691:-1:exon
so has part: feature:1117292-1117561:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1133186-1133217:-1:exon

position:1133186:-1
position: 1133186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1122775-1122928:-1:exon

position:1122775:-1
position: 1122775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1122928:-1
position: 1122928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1121637-1121856:-1:exon

position:1121637:-1
position: 1121637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1121856:-1
position: 1121856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1120378-1120691:-1:exon

position:1120378:-1
position: 1120378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1120691:-1
position: 1120691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1117292-1117561:-1:exon

position:1117561:-1
position: 1117561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354254
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354254
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor-like
translation: MAYTLTRCKHMYWAVTNIDYIHQRTGKRIGLMILVIWCVSFLVCIAPLLGWKDPGWEHRVSQERMCLVSQDIGYQIFATLASFYLPLLVILFLYWRIFQTARKRIRRRVTVATPPTSAKGGGVKGGPQPRGGVIAGLCAAGAAGGSGGIAAAVVGVIGRPLPTISEATTTTTTTTAFTNVSSANTSPEKGSFGNGLEADPPTCDPMSSIGPTAGANYSQPPPLKQRKQPKESAETKRERKAAKTLAIITGAFVICWLPFFIMAILLPGDSGMFHQYVIAFFLWLGYFNSTLNPIIYTVFSPEFRHAFKRLLCGRRASVRRRGAHHNFPR
SIO_010081: LOC120354254
subclass of: SO_0000673
so part of: LOC120354254
location: complement(join(1117292..1117561,1120378..1120691,1121637..1121856,1122775..1122928,1133186..1133217))
location: region:1117292-1133217:-1
so has part: feature:1133186-1133217:-1:exon
so has part: feature:1122775-1122928:-1:exon
so has part: feature:1121637-1121856:-1:exon
so has part: feature:1120378-1120691:-1:exon
so has part: feature:1117292-1117561:-1:exon

XP_039297062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1133186-1133217:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1122775-1122928:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1121637-1121856:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1120378-1120691:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1117292-1117561:-1:exon

LOC120354255
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1136249..1145410
location: region:1136249-1145410:1
so has part: feature:1136249-1145410:1:exon
subclass of: SO_0000010

120354255
type: Gene
SIO_000068: ncbigene

position:1136249:1
position: 1136249
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1145410:1
position: 1145410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1136249-1145410:1:exon

LOC120354255
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354255
product: partitioning defective 3 homolog
inference: similar to RNA sequence (same species):INSD:GAYF02024531.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 532 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_039441129.1
SIO_010081: LOC120354255
subclass of: SO_0000673
so part of: LOC120354255
location: join(<1136249..1136346,1137763..1137893,1142416..1142693,1145292..1145410)
location: region:1136249-1145410:1
so has part: feature:1136249-1136346:1:exon
so has part: feature:1137763-1137893:1:exon
so has part: feature:1142416-1142693:1:exon
so has part: feature:1145292-1145410:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1136249-1136346:1:exon

position:1136346:1
position: 1136346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1137763-1137893:1:exon

position:1137763:1
position: 1137763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1137893:1
position: 1137893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1142416-1142693:1:exon

position:1142416:1
position: 1142416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142693:1
position: 1142693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1145292-1145410:1:exon

position:1145292:1
position: 1145292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120354255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354255
inference: similar to RNA sequence (same species):INSD:GAYF02024531.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 307 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 3
product: partitioning defective 3 homolog
translation: METLRRAMLRTEGPVEGSIVLTVARRIQGAGSKDTPRRGSVSSLLTDSSANTETFGGSNGNNGGVDVQNNSGNSEASDSTVICLPTTTQHSSNSNSTQRSNNDGVLMRNAVLERLTGQTSLPPGMGGLHNESYYRATHQTTLLSLGSNPETGGKLTSPTVNQPARETLIIEDDSSFLPSGDTSLGAIRPLAAMKPSRTDSTSTSSQADATYASQLSLDSGMQVGAGAGASATGFSRDAFGRQSMSEKRHATLDAKNTDTYRRTKRARELRQAEGEDMDRSQLGPSLGMKKSSSLESLQTMVQEVNISYYY
SIO_010081: LOC120354255
subclass of: SO_0000673
so part of: LOC120354255
location: join(<1136249..1136346,1137763..1137893,1142416..1142693,1145292..1145410)
location: region:1136249-1145410:1
so has part: feature:1136249-1136346:1:exon
so has part: feature:1137763-1137893:1:exon
so has part: feature:1142416-1142693:1:exon
so has part: feature:1145292-1145410:1:exon

XP_039297063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1136249-1136346:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1137763-1137893:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1142416-1142693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1145292-1145410:1:exon

LOC111057333
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111057333
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1147405..1167946
location: region:1147405-1167946:1
so has part: feature:1147405-1167946:1:exon
subclass of: SO_0000010

111057333
type: Gene
SIO_000068: ncbigene

position:1147405:1
position: 1147405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1167946:1
position: 1167946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1147405-1167946:1:exon

LOC111057333
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111057333
product: uncharacterized protein DDB_G0283357, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_039440460.1
SIO_010081: LOC111057333
subclass of: SO_0000673
so part of: LOC111057333
location: join(1147405..1147495,1150847..1151099,1153962..1154151,1156300..1156956,1161386..1161501,1164973..1165143,1166462..1166733,1167272..1167946)
location: region:1147405-1167946:1
so has part: feature:1147405-1147495:1:exon
so has part: feature:1150847-1151099:1:exon
so has part: feature:1153962-1154151:1:exon
so has part: feature:1156300-1156956:1:exon
so has part: feature:1161386-1161501:1:exon
so has part: feature:1164973-1165143:1:exon
so has part: feature:1166462-1166733:1:exon
so has part: feature:1167272-1167946:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1147405-1147495:1:exon

position:1147495:1
position: 1147495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1150847-1151099:1:exon

position:1150847:1
position: 1150847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1151099:1
position: 1151099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1153962-1154151:1:exon

position:1153962:1
position: 1153962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1154151:1
position: 1154151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1156300-1156956:1:exon

position:1156300:1
position: 1156300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1156956:1
position: 1156956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1161386-1161501:1:exon

position:1161386:1
position: 1161386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1161501:1
position: 1161501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1164973-1165143:1:exon

position:1164973:1
position: 1164973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1165143:1
position: 1165143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1166462-1166733:1:exon

position:1166462:1
position: 1166462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1166733:1
position: 1166733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1167272-1167946:1:exon

position:1167272:1
position: 1167272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111057333
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111057333
product: uncharacterized protein DDB_G0283357, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_039440461.1
SIO_010081: LOC111057333
subclass of: SO_0000673
so part of: LOC111057333
location: join(1147405..1147495,1150847..1151099,1153962..1154151,1156300..1156956,1161386..1161501,1164991..1165143,1166462..1166733,1167272..1167946)
location: region:1147405-1167946:1
so has part: feature:1147405-1147495:1:exon
so has part: feature:1150847-1151099:1:exon
so has part: feature:1153962-1154151:1:exon
so has part: feature:1156300-1156956:1:exon
so has part: feature:1161386-1161501:1:exon
so has part: feature:1164991-1165143:1:exon
so has part: feature:1166462-1166733:1:exon
so has part: feature:1167272-1167946:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1147405-1147495:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1150847-1151099:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1153962-1154151:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1156300-1156956:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1161386-1161501:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1164991-1165143:1:exon

position:1164991:1
position: 1164991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1166462-1166733:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1167272-1167946:1:exon

LOC111057333
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111057333
product: uncharacterized protein DDB_G0283357, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_039440462.1
SIO_010081: LOC111057333
subclass of: SO_0000673
so part of: LOC111057333
location: join(1147405..1147495,1150847..1151099,1153962..1154151,1156300..1156956,1161386..1161501,1166462..1166733,1167272..1167946)
location: region:1147405-1167946:1
so has part: feature:1147405-1147495:1:exon
so has part: feature:1150847-1151099:1:exon
so has part: feature:1153962-1154151:1:exon
so has part: feature:1156300-1156956:1:exon
so has part: feature:1161386-1161501:1:exon
so has part: feature:1166462-1166733:1:exon
so has part: feature:1167272-1167946:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1147405-1147495:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1150847-1151099:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1153962-1154151:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1156300-1156956:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1161386-1161501:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1166462-1166733:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1167272-1167946:1:exon

LOC111057333
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111057333
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable serine/threonine-protein kinase cdc7 isoform X1
translation: MFRFGKHRKAGDDGEEENEEGRGGTEGEGVIGGGGGVEEGEYDEHQQQVIQEQLRRLMVAAASTQPSREAGVDIGGSGRGGNPSMITSASSLQHPSSDVTRGNAMMTSSGGQLPQPSSEYAGSATASSEHTGSRTLGSEFMGSRTSGSELSGSRTYGNELTGSRTSSNDMGGSRTTGSDIVGSRTYGNELTGSRTYGNELTGSRTSGNEMSGSRTLGNELTGSRTSGSDMGGSRTSGNDVTGSNDVTRTERIQQLRAHHQLRHQERRGHYPLDDTEERYEMALRQRLEQQQDSAINRPGSRVAITDPARFSHYVNYQQIQHHLKCWNASSMQKHNPHQNVVEVRTELPLQQHKYVEVRKGGPPRHYSSTLSVRILDDDEESRRQQHYHSQRREATSSRSGGGMGDHPGNSAHPRPVSNFYEYESVESHLLNNGGTNSNSLPRRPIGGASNTTTAAQSGGVFRNYQRHDNYAAVPGMVAAAHQFRPQQHHQQQGNNNSNNNNLNVNNYSNNNNNNNNSRKSHGPFVSHVTIREYQPKV
SIO_010081: LOC111057333
subclass of: SO_0000673
so part of: LOC111057333
location: join(1151092..1151099,1153962..1154151,1156300..1156956,1161386..1161501,1164973..1165143,1166462..1166733,1167272..1167471)
location: region:1151092-1167471:1
so has part: feature:1151092-1151099:1:exon
so has part: feature:1153962-1154151:1:exon
so has part: feature:1156300-1156956:1:exon
so has part: feature:1161386-1161501:1:exon
so has part: feature:1164973-1165143:1:exon
so has part: feature:1166462-1166733:1:exon
so has part: feature:1167272-1167471:1:exon

XP_039296394.1
type: Protein
SIO_000068: ncbiprotein

position:1151092:1
position: 1151092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1167471:1
position: 1167471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1151092-1151099:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1153962-1154151:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1156300-1156956:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1161386-1161501:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1164973-1165143:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1166462-1166733:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1167272-1167471:1:exon

LOC111057333
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111057333
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein DDB_G0283357 isoform X2
translation: MFRFGKHRKAGDDGEEENEEGRGGTEGEGVIGGGGGVEEGEYDEHQQQVIQEQLRRLMVAAASTQPSREAGVDIGGSGRGGNPSMITSASSLQHPSSDVTRGNAMMTSSGGQLPQPSSEYAGSATASSEHTGSRTLGSEFMGSRTSGSELSGSRTYGNELTGSRTSSNDMGGSRTTGSDIVGSRTYGNELTGSRTYGNELTGSRTSGNEMSGSRTLGNELTGSRTSGSDMGGSRTSGNDVTGSNDVTRTERIQQLRAHHQLRHQERRGHYPLDDTEERYEMALRQRLEQQQDSAINRPGSRVAITDPARFSHYVNYQQIQHHLNMQKHNPHQNVVEVRTELPLQQHKYVEVRKGGPPRHYSSTLSVRILDDDEESRRQQHYHSQRREATSSRSGGGMGDHPGNSAHPRPVSNFYEYESVESHLLNNGGTNSNSLPRRPIGGASNTTTAAQSGGVFRNYQRHDNYAAVPGMVAAAHQFRPQQHHQQQGNNNSNNNNLNVNNYSNNNNNNNNSRKSHGPFVSHVTIREYQPKV
SIO_010081: LOC111057333
subclass of: SO_0000673
so part of: LOC111057333
location: join(1151092..1151099,1153962..1154151,1156300..1156956,1161386..1161501,1164991..1165143,1166462..1166733,1167272..1167471)
location: region:1151092-1167471:1
so has part: feature:1151092-1151099:1:exon
so has part: feature:1153962-1154151:1:exon
so has part: feature:1156300-1156956:1:exon
so has part: feature:1161386-1161501:1:exon
so has part: feature:1164991-1165143:1:exon
so has part: feature:1166462-1166733:1:exon
so has part: feature:1167272-1167471:1:exon

XP_039296395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1151092-1151099:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1153962-1154151:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1156300-1156956:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1161386-1161501:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1164991-1165143:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1166462-1166733:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1167272-1167471:1:exon

LOC111057333
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111057333
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein DDB_G0283357 isoform X3
translation: MFRFGKHRKAGDDGEEENEEGRGGTEGEGVIGGGGGVEEGEYDEHQQQVIQEQLRRLMVAAASTQPSREAGVDIGGSGRGGNPSMITSASSLQHPSSDVTRGNAMMTSSGGQLPQPSSEYAGSATASSEHTGSRTLGSEFMGSRTSGSELSGSRTYGNELTGSRTSSNDMGGSRTTGSDIVGSRTYGNELTGSRTYGNELTGSRTSGNEMSGSRTLGNELTGSRTSGSDMGGSRTSGNDVTGSNDVTRTERIQQLRAHHQLRHQERRGHYPLDDTEERYEMALRQRLEQQQDSAINRPGSRVAITDPARFSHYVNYQQIQHHLNRRQQHYHSQRREATSSRSGGGMGDHPGNSAHPRPVSNFYEYESVESHLLNNGGTNSNSLPRRPIGGASNTTTAAQSGGVFRNYQRHDNYAAVPGMVAAAHQFRPQQHHQQQGNNNSNNNNLNVNNYSNNNNNNNNSRKSHGPFVSHVTIREYQPKV
SIO_010081: LOC111057333
subclass of: SO_0000673
so part of: LOC111057333
location: join(1151092..1151099,1153962..1154151,1156300..1156956,1161386..1161501,1166462..1166733,1167272..1167471)
location: region:1151092-1167471:1
so has part: feature:1151092-1151099:1:exon
so has part: feature:1153962-1154151:1:exon
so has part: feature:1156300-1156956:1:exon
so has part: feature:1161386-1161501:1:exon
so has part: feature:1166462-1166733:1:exon
so has part: feature:1167272-1167471:1:exon

XP_039296396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1151092-1151099:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1153962-1154151:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1156300-1156956:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1161386-1161501:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1166462-1166733:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1167272-1167471:1:exon

LOC111057335
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111057335
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1193420..1259767
location: region:1193420-1259767:1
so has part: feature:1193420-1259767:1:exon
subclass of: SO_0000010

111057335
type: Gene
SIO_000068: ncbigene

position:1193420:1
position: 1193420
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1259767:1
position: 1259767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1193420-1259767:1:exon

LOC111057335
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111057335
product: formin-like protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 9 long SRA reads, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039441130.1
SIO_010081: LOC111057335
subclass of: SO_0000673
so part of: LOC111057335
location: join(<1193420..1193594,1208906..1209108,1211401..1211477,1214771..1214942,1223739..1224002,1226488..1226616,1229053..1229182,1231528..1231820,1233491..1233737,1235230..1235357,1238831..1239028,1244220..1244401,1245794..1245926,1248670..1248846,1254415..1254594,1255358..1255544,1259428..1259767)
location: region:1193420-1259767:1
so has part: feature:1193420-1193594:1:exon
so has part: feature:1208906-1209108:1:exon
so has part: feature:1211401-1211477:1:exon
so has part: feature:1214771-1214942:1:exon
so has part: feature:1223739-1224002:1:exon
so has part: feature:1226488-1226616:1:exon
so has part: feature:1229053-1229182:1:exon
so has part: feature:1231528-1231820:1:exon
so has part: feature:1233491-1233737:1:exon
so has part: feature:1235230-1235357:1:exon
so has part: feature:1238831-1239028:1:exon
so has part: feature:1244220-1244401:1:exon
so has part: feature:1245794-1245926:1:exon
so has part: feature:1248670-1248846:1:exon
so has part: feature:1254415-1254594:1:exon
so has part: feature:1255358-1255544:1:exon
so has part: feature:1259428-1259767:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1193420-1193594:1:exon

position:1193594:1
position: 1193594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1208906-1209108:1:exon

position:1208906:1
position: 1208906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1209108:1
position: 1209108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1211401-1211477:1:exon

position:1211401:1
position: 1211401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1211477:1
position: 1211477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1214771-1214942:1:exon

position:1214771:1
position: 1214771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1214942:1
position: 1214942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1223739-1224002:1:exon

position:1223739:1
position: 1223739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1224002:1
position: 1224002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1226488-1226616:1:exon

position:1226488:1
position: 1226488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1226616:1
position: 1226616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1229053-1229182:1:exon

position:1229053:1
position: 1229053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1229182:1
position: 1229182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1231528-1231820:1:exon

position:1231528:1
position: 1231528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1231820:1
position: 1231820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1233491-1233737:1:exon

position:1233491:1
position: 1233491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1233737:1
position: 1233737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1235230-1235357:1:exon

position:1235230:1
position: 1235230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235357:1
position: 1235357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1238831-1239028:1:exon

position:1238831:1
position: 1238831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1239028:1
position: 1239028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1244220-1244401:1:exon

position:1244220:1
position: 1244220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1244401:1
position: 1244401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1245794-1245926:1:exon

position:1245794:1
position: 1245794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1245926:1
position: 1245926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1248670-1248846:1:exon

position:1248670:1
position: 1248670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1248846:1
position: 1248846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1254415-1254594:1:exon

position:1254415:1
position: 1254415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1254594:1
position: 1254594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1255358-1255544:1:exon

position:1255358:1
position: 1255358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1255544:1
position: 1255544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1259428-1259767:1:exon

position:1259428:1
position: 1259428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111057335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111057335
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: formin-like protein
translation: YCSFSVGFRWVREFLNEENQGLNSLVNYLSFRLQMMHYEQRSPPSTTASEERITNLVSPDSPLPPTSNGVIHPGGVTALEQSGLLMDSPASVMRRHHRHATKLKMGDTRDDIHVCIMCLRAIMNNKYGFNMVIQHTEAINCIALSLTHKSLRTKALVLELLAAICLVKGGHEIILCAFDKFKDTCHEEKRFQTLMDYFINYEVFHVEFMVACVQFVNIVVHSVEDMNYRVHLQYELTQLGLDAYLERLRHNTESEELRVQILAYLDNVFDVAALMEDSETKTAALEKVAELEDELGQAHDRLSEIERESLAQIANLETALAQARCERDELAEGRRQIEEEVQTLRRTVTDQRQQSQSRQSMLEETIQQLMSRTGGSSTLPSNSTIGSSSTSSGISSPSHPSSSPPPPPPPPPPPPPPPPASSSTAPPPPPPPMMMMTSHPPPPPPAPGQMAAPDGAMTIKRKVLTKHKLPTLNWLPLKPNQVRGTIFNELDDDKLFAVIDFVDFEEKFKLGGALRVVGGGGGGGTQNGGEDHQDGGQLATFPSKRFKKADAVSLLEHTRLRNIAISRRKIDMPVEKVVAAINALDLKQISLENVEILQKMVPTDAETKAYREYVGERKDVAALTDEDRFLLQLTKVERLAQKLTIINYMGNFCDNVHLITPVYILLFNSISLLTDFSCVAVSLENVVLDVAELEKHMEVVRREADLRHSSSSSASSSSLLRDFLHNSEDKLRRLRQDCRQAQDSFKECAQFFGEESSRSTDANAFFALLVRFVKAFKLADAENEQRRRLEQTAERLAKGGGGGGSEGAEVAKRNRLNQQKKQQDAVINELKVKARQLADAENEQRRRLEQTAERLAKGGGGGGGSEGAEVAKRNRLNQQKKQQDAVINELKVKARQVQEKKLLHQDEVYNGALEDILLGLKSEPYRRADAVRRSQRRRIDSHRLSRTMDEIEL
SIO_010081: LOC111057335
subclass of: SO_0000673
so part of: LOC111057335
location: join(<1193420..1193594,1208906..1209108,1211401..1211477,1214771..1214942,1223739..1224002,1226488..1226616,1229053..1229182,1231528..1231820,1233491..1233737,1235230..1235357,1238831..1239028,1244220..1244401,1245794..1245926,1248670..1248846,1254415..1254594,1255358..1255531)
location: region:1193420-1255531:1
so has part: feature:1193420-1193594:1:exon
so has part: feature:1208906-1209108:1:exon
so has part: feature:1211401-1211477:1:exon
so has part: feature:1214771-1214942:1:exon
so has part: feature:1223739-1224002:1:exon
so has part: feature:1226488-1226616:1:exon
so has part: feature:1229053-1229182:1:exon
so has part: feature:1231528-1231820:1:exon
so has part: feature:1233491-1233737:1:exon
so has part: feature:1235230-1235357:1:exon
so has part: feature:1238831-1239028:1:exon
so has part: feature:1244220-1244401:1:exon
so has part: feature:1245794-1245926:1:exon
so has part: feature:1248670-1248846:1:exon
so has part: feature:1254415-1254594:1:exon
so has part: feature:1255358-1255531:1:exon

XP_039297064.1
type: Protein
SIO_000068: ncbiprotein

position:1255531:1
position: 1255531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1193420-1193594:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1208906-1209108:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1211401-1211477:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1214771-1214942:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1223739-1224002:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1226488-1226616:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1229053-1229182:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1231528-1231820:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1233491-1233737:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1235230-1235357:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1238831-1239028:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1244220-1244401:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1245794-1245926:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1248670-1248846:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1254415-1254594:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1255358-1255531:1:exon

LOC111060163
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111060163
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1270496..1389512)
location: region:1270496-1389512:-1
so has part: feature:1270496-1389512:-1:exon
subclass of: SO_0000010

111060163
type: Gene
SIO_000068: ncbigene

position:1270496:-1
position: 1270496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1389512:-1
position: 1389512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1270496-1389512:-1:exon

LOC111060163
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111060163
product: uncharacterized LOC111060163
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 long SRA reads, 2 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039441131.1
SIO_010081: LOC111060163
subclass of: SO_0000673
so part of: LOC111060163
location: complement(join(1270496..1270663,1272971..1273154,1274438..1274614,1277627..1277819,1280063..1280148,1285088..1285401,1285990..1286134,1287324..1287474,1289200..1289222,1289279..1289560,1290167..1290313,1292124..1292289,1294141..1294385,1299722..1299874,1301097..1301263,1302603..1302835,1303883..1304119,1308252..1308382,1310950..1310994,1314006..1314137,1316667..1316761,1319920..1320132,1321178..1321229,1324892..1325025,1327057..1327117,1329600..1329739,1331298..1331474,1347289..1347556,1361403..1361789,1379772..1380236,1384627..1384767,1386868..1387275,1389374..1389512))
location: region:1270496-1389512:-1
so has part: feature:1389374-1389512:-1:exon
so has part: feature:1386868-1387275:-1:exon
so has part: feature:1384627-1384767:-1:exon
so has part: feature:1379772-1380236:-1:exon
so has part: feature:1361403-1361789:-1:exon
so has part: feature:1347289-1347556:-1:exon
so has part: feature:1331298-1331474:-1:exon
so has part: feature:1329600-1329739:-1:exon
so has part: feature:1327057-1327117:-1:exon
so has part: feature:1324892-1325025:-1:exon
so has part: feature:1321178-1321229:-1:exon
so has part: feature:1319920-1320132:-1:exon
so has part: feature:1316667-1316761:-1:exon
so has part: feature:1314006-1314137:-1:exon
so has part: feature:1310950-1310994:-1:exon
so has part: feature:1308252-1308382:-1:exon
so has part: feature:1303883-1304119:-1:exon
so has part: feature:1302603-1302835:-1:exon
so has part: feature:1301097-1301263:-1:exon
so has part: feature:1299722-1299874:-1:exon
so has part: feature:1294141-1294385:-1:exon
so has part: feature:1292124-1292289:-1:exon
so has part: feature:1290167-1290313:-1:exon
so has part: feature:1289279-1289560:-1:exon
so has part: feature:1289200-1289222:-1:exon
so has part: feature:1287324-1287474:-1:exon
so has part: feature:1285990-1286134:-1:exon
so has part: feature:1285088-1285401:-1:exon
so has part: feature:1280063-1280148:-1:exon
so has part: feature:1277627-1277819:-1:exon
so has part: feature:1274438-1274614:-1:exon
so has part: feature:1272971-1273154:-1:exon
so has part: feature:1270496-1270663:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1389374-1389512:-1:exon

position:1389374:-1
position: 1389374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1386868-1387275:-1:exon

position:1386868:-1
position: 1386868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1387275:-1
position: 1387275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1384627-1384767:-1:exon

position:1384627:-1
position: 1384627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1384767:-1
position: 1384767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1379772-1380236:-1:exon

position:1379772:-1
position: 1379772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1380236:-1
position: 1380236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1361403-1361789:-1:exon

position:1361403:-1
position: 1361403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1361789:-1
position: 1361789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1347289-1347556:-1:exon

position:1347289:-1
position: 1347289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1347556:-1
position: 1347556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1331298-1331474:-1:exon

position:1331298:-1
position: 1331298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1331474:-1
position: 1331474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1329600-1329739:-1:exon

position:1329600:-1
position: 1329600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1329739:-1
position: 1329739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1327057-1327117:-1:exon

position:1327057:-1
position: 1327057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1327117:-1
position: 1327117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1324892-1325025:-1:exon

position:1324892:-1
position: 1324892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1325025:-1
position: 1325025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1321178-1321229:-1:exon

position:1321178:-1
position: 1321178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1321229:-1
position: 1321229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1319920-1320132:-1:exon

position:1319920:-1
position: 1319920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1320132:-1
position: 1320132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1316667-1316761:-1:exon

position:1316667:-1
position: 1316667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1316761:-1
position: 1316761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1314006-1314137:-1:exon

position:1314006:-1
position: 1314006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1314137:-1
position: 1314137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1310950-1310994:-1:exon

position:1310950:-1
position: 1310950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1310994:-1
position: 1310994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1308252-1308382:-1:exon

position:1308252:-1
position: 1308252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1308382:-1
position: 1308382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1303883-1304119:-1:exon

position:1303883:-1
position: 1303883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1304119:-1
position: 1304119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1302603-1302835:-1:exon

position:1302603:-1
position: 1302603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1302835:-1
position: 1302835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1301097-1301263:-1:exon

position:1301097:-1
position: 1301097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1301263:-1
position: 1301263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1299722-1299874:-1:exon

position:1299722:-1
position: 1299722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1299874:-1
position: 1299874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1294141-1294385:-1:exon

position:1294141:-1
position: 1294141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1294385:-1
position: 1294385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1292124-1292289:-1:exon

position:1292124:-1
position: 1292124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292289:-1
position: 1292289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1290167-1290313:-1:exon

position:1290167:-1
position: 1290167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1290313:-1
position: 1290313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1289279-1289560:-1:exon

position:1289279:-1
position: 1289279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1289560:-1
position: 1289560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1289200-1289222:-1:exon

position:1289200:-1
position: 1289200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1289222:-1
position: 1289222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1287324-1287474:-1:exon

position:1287324:-1
position: 1287324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287474:-1
position: 1287474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1285990-1286134:-1:exon

position:1285990:-1
position: 1285990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1286134:-1
position: 1286134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1285088-1285401:-1:exon

position:1285088:-1
position: 1285088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1285401:-1
position: 1285401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1280063-1280148:-1:exon

position:1280063:-1
position: 1280063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1280148:-1
position: 1280148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1277627-1277819:-1:exon

position:1277627:-1
position: 1277627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1277819:-1
position: 1277819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1274438-1274614:-1:exon

position:1274438:-1
position: 1274438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1274614:-1
position: 1274614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1272971-1273154:-1:exon

position:1272971:-1
position: 1272971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1273154:-1
position: 1273154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1270496-1270663:-1:exon

position:1270663:-1
position: 1270663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111060163
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111060163
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111060163
translation: MSDEPPAELFGSDSLPETDDVIKGDETMEFSTSEESSKMVNADFQKVMDSISVSADGVDVDDEKLLSQFVVGNLGADDHHHGPTAAEESSSSSLADEKALLESVLARAANSDQVATLGDQVATLGDQVATLGGQGRTLGSLVGALSGHVASPAAGDETPEETMQVERLMESIHSGSSNDEPKVAVGSSDVKEEEEEREVEAMEVDQQSNQLIITETRGAAADTETFLQQTLQDDDDTISSTTIAVPTTTTYQSLTSLQAAADIFGDDEDDDDDVIKAAGMQSSTADDNGSQQTVMTALVGGGGVITASGGGYVMTSSSSGGGQLMTSSVVREEEELTSVEDVLSALHSELDEEEEAARGGGGGGGGGGEEIKKVEEKSKWKLKVEQQRQQQAQVTKPAKPSSDGASGPMYKCFVSGCKSTTSSAAGSGATSGGKSVTTSAGAGSGATSGGKSVTTSAGAGSGATSGGEMRFFKPPPNPLIFKRWARNLCQGSQQLAYTALICELHFRPQDIREVFVNGKKKWVLTEGALPKPSTASALAAAAAQGGSLAALQAGNGAAAAMTSPGGKRPVGRPSGLYRQQQFEALQAAQARANKLQREKLSQDAVVEDEKTSTAELLYTLTDNAESADVTSQSADNAAVAASAVSPSDQSKPLTENPQVLQGLEEDLEELDVFVCGLCHTVFHFVEQFQEHRARVQCRGTSTFKASLSESKPHVWAFLLWKNAQTKILGETESSWKLYQRWCKMTDQLRETWIAAGRDLQANSCVVQHLQSIKNGKSKTASIYSALEEDEDIRLRPYSRRPEWNYANANARMPNAGVNQTQALTIRRLDTNDDNQYGNDRPISSIASPIDEAQFEALYNSSSSLAAKENILGGDSNKLHKKPGRKKNDDFDIKTVVSREVVFLCLASLAAKENILGGDSNKLHKKPGRKKNDDFDIKTEKKDDFGKYPITNETMVGPADGLVTTQEEFVVEKIVSRRFNQKKKQYEYLLKWEGYPPEQNTWEPAQNMSTCQHLLAEFESNLAKQGAAKGASISSFEGTQGGTLSGPLKKGTPAAVKQEMVDIKQEVASPPGTPSGRPVRSSKKKALDQVKVWCGSMIRPLDMVEGGGGALKRSLSDDSDYSDNMADYDGDYKRIKMEDSDSDTGGVVMVPRRGGANSVVGRARAQINGLKRERDGEGLAAALGLESDEEGAAGQVKVRASSLSPTNQQVLVASAKGVVKVDPSQVPNLTSGVYIMSNKSGIVKLDSVTPNSAISSLQRKGLLKSTPSHKSGVIMLGSRMGPGAAAATKSGILRRPTVAASSPTKQPQSNSNTLATTAATALGGPRPVGPLRPVPKPSNIISRQTGVMSKQAPVASRLHGLNKGVLTTPSPLKRPGSMLKSGIKPIESILGTVGQLRKKDELGTPQKRILGGGARGGVARGGKSTAKMIHKGATVVPRTSLVHSRSLESYAGGTGEPDVVVGLPDDFPPLGDLPPITPDSPPRPLTLCPLTAECWPGQRGAYTPAFASQGGHPPTTTTIQEIITTTTTATTVAQPHIIKVVDTRIKSSRDKVVMSKQAPVASRLHGLNKGVLTTPSPLKRPGSMLKSGIKPIESILGTKKDELGTPQKRILGGGARGGVARGGKSTAKMIHKGATVVPRTTLSSTLGVMNTDLDNIKLESYAGGTGETDVVVGLPDDFPPLGDLPPITPDSPPRPPTLCPLTGRVLARAEGEPTPPPSPPTVDIPTTTTTIQEIITTTTTATTVAQPHIIKVEMSSQEIPANVEPATVSVRKVASRSRAKSKGAANAAAESATSLGTITVPSRKISYQQQQQQQQQQIVVEQQPDEIDDNEMVTITGDDGLLYQVSQADLRNAGGGALLVDGGYVAGEASAVTVEAGDQGGATQVLTLDSAYADAVAQLIPEQFYVKEGGSEGGVAVVEAGGGGAVVVDGAAEGGVVVGAGGEDEEEGGQVVAQLVEACEPTPGGGRRVVLLLPDGNLMMTEVDEEQYAALGLDNK
SIO_010081: LOC111060163
subclass of: SO_0000673
so part of: LOC111060163
location: complement(join(1270566..1270663,1272971..1273154,1274438..1274614,1277627..1277819,1280063..1280148,1285088..1285401,1285990..1286134,1287324..1287474,1289200..1289222,1289279..1289560,1290167..1290313,1292124..1292289,1294141..1294385,1299722..1299874,1301097..1301263,1302603..1302835,1303883..1304119,1308252..1308382,1310950..1310994,1314006..1314137,1316667..1316761,1319920..1320132,1321178..1321229,1324892..1325025,1327057..1327117,1329600..1329739,1331298..1331474,1347289..1347556,1361403..1361789,1379772..1380236,1384627..1384767,1386868..1387275,1389374..1389511))
location: region:1270566-1389511:-1
so has part: feature:1389374-1389511:-1:exon
so has part: feature:1386868-1387275:-1:exon
so has part: feature:1384627-1384767:-1:exon
so has part: feature:1379772-1380236:-1:exon
so has part: feature:1361403-1361789:-1:exon
so has part: feature:1347289-1347556:-1:exon
so has part: feature:1331298-1331474:-1:exon
so has part: feature:1329600-1329739:-1:exon
so has part: feature:1327057-1327117:-1:exon
so has part: feature:1324892-1325025:-1:exon
so has part: feature:1321178-1321229:-1:exon
so has part: feature:1319920-1320132:-1:exon
so has part: feature:1316667-1316761:-1:exon
so has part: feature:1314006-1314137:-1:exon
so has part: feature:1310950-1310994:-1:exon
so has part: feature:1308252-1308382:-1:exon
so has part: feature:1303883-1304119:-1:exon
so has part: feature:1302603-1302835:-1:exon
so has part: feature:1301097-1301263:-1:exon
so has part: feature:1299722-1299874:-1:exon
so has part: feature:1294141-1294385:-1:exon
so has part: feature:1292124-1292289:-1:exon
so has part: feature:1290167-1290313:-1:exon
so has part: feature:1289279-1289560:-1:exon
so has part: feature:1289200-1289222:-1:exon
so has part: feature:1287324-1287474:-1:exon
so has part: feature:1285990-1286134:-1:exon
so has part: feature:1285088-1285401:-1:exon
so has part: feature:1280063-1280148:-1:exon
so has part: feature:1277627-1277819:-1:exon
so has part: feature:1274438-1274614:-1:exon
so has part: feature:1272971-1273154:-1:exon
so has part: feature:1270566-1270663:-1:exon

XP_039297065.1
type: Protein
SIO_000068: ncbiprotein

position:1270566:-1
position: 1270566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1389511:-1
position: 1389511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1389374-1389511:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1386868-1387275:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1384627-1384767:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1379772-1380236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1361403-1361789:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1347289-1347556:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1331298-1331474:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1329600-1329739:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1327057-1327117:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1324892-1325025:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1321178-1321229:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1319920-1320132:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1316667-1316761:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1314006-1314137:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1310950-1310994:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1308252-1308382:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1303883-1304119:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1302603-1302835:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1301097-1301263:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1299722-1299874:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1294141-1294385:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1292124-1292289:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1290167-1290313:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1289279-1289560:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1289200-1289222:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1287324-1287474:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1285990-1286134:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1285088-1285401:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1280063-1280148:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1277627-1277819:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1274438-1274614:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1272971-1273154:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1270566-1270663:-1:exon

LOC111058028
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111058028
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1404404..1458206)
location: region:1404404-1458206:-1
so has part: feature:1404404-1458206:-1:exon
subclass of: SO_0000010

111058028
type: Gene
SIO_000068: ncbigene

position:1404404:-1
position: 1404404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1458206:-1
position: 1458206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1404404-1458206:-1:exon

LOC111058028
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111058028
product: ATP-binding cassette sub-family F member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 long SRA reads, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039441133.1
SIO_010081: LOC111058028
subclass of: SO_0000673
so part of: LOC111058028
location: complement(join(1404404..1404870,1407395..1407561,1408349..1408569,1418207..1418387,1420825..1420999,1425834..1426024,1432863..1433034,1440304..1440519,1442652..1442756,1445188..1445477,1449562..1449778,1457295..1457403,1458058..1458206))
location: region:1404404-1458206:-1
so has part: feature:1458058-1458206:-1:exon
so has part: feature:1457295-1457403:-1:exon
so has part: feature:1449562-1449778:-1:exon
so has part: feature:1445188-1445477:-1:exon
so has part: feature:1442652-1442756:-1:exon
so has part: feature:1440304-1440519:-1:exon
so has part: feature:1432863-1433034:-1:exon
so has part: feature:1425834-1426024:-1:exon
so has part: feature:1420825-1420999:-1:exon
so has part: feature:1418207-1418387:-1:exon
so has part: feature:1408349-1408569:-1:exon
so has part: feature:1407395-1407561:-1:exon
so has part: feature:1404404-1404870:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1458058-1458206:-1:exon

position:1458058:-1
position: 1458058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1457295-1457403:-1:exon

position:1457295:-1
position: 1457295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1457403:-1
position: 1457403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1449562-1449778:-1:exon

position:1449562:-1
position: 1449562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1449778:-1
position: 1449778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1445188-1445477:-1:exon

position:1445188:-1
position: 1445188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1445477:-1
position: 1445477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1442652-1442756:-1:exon

position:1442652:-1
position: 1442652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1442756:-1
position: 1442756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1440304-1440519:-1:exon

position:1440304:-1
position: 1440304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1440519:-1
position: 1440519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1432863-1433034:-1:exon

position:1432863:-1
position: 1432863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1433034:-1
position: 1433034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1425834-1426024:-1:exon

position:1425834:-1
position: 1425834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1426024:-1
position: 1426024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1420825-1420999:-1:exon

position:1420825:-1
position: 1420825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1420999:-1
position: 1420999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1418207-1418387:-1:exon

position:1418207:-1
position: 1418207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1418387:-1
position: 1418387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1408349-1408569:-1:exon

position:1408349:-1
position: 1408349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1408569:-1
position: 1408569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1407395-1407561:-1:exon

position:1407395:-1
position: 1407395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1407561:-1
position: 1407561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1404404-1404870:-1:exon

position:1404870:-1
position: 1404870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111058028
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111058028
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-binding cassette sub-family F member 3
translation: MAACQDLIKSEFPKIDDDLYQYVEGILENGVEDFEDSAEVYDAIGEVLHEVADEKSEKEIRDICNKLLRILRPDKGGGGGRGGGGGGGALNDITGGAHKVLNAPVHLASMAANLENNVTDIKSIWVMQRDDSLKVDQKKLEKAEAKLQAKQERRAEQLVTNRSSSAVTSSNSGGGGQQVGAGGGGQLMPALQAATASQATSKKEAKMEAKGCNRTQDIRIENFDVAYGERVLLQAADIVLAYGRRYGLVGRNGIGKTTLLRMISSGQLRIPSHISILHVEQEVVGDDTPALESVLECDIVRHTLLKREQEINALINNKSVPYLTIHTFTTFFYALSICRPDLLLLDEPTNMLDMKAIIWLETYLQNWPTTLLVVSHDRHFLDTVPTDILHLHTQRIDSYRGNYDNFAKTKQEKLKNQQREWEAQQQHRAHVQEFIDRFRYNANRASSVQSKIKMLERLPELKNVEKEVEVVLKFPETEPLSPPILQLNEVCFSYVKGKPILTNVNLGATLESRICIVGDNGAGKTTLLKLIMGLLSPSSGDQHTHRAIKFGYFSQHHVDQLAMGVSSVELLQQSYPGKPVEEYRRQLGSFGVSGDLALQTVGSLSGGQKSRVAFARMCMASPNFLVLDEPTNHLDIETIEALGKAINKYNGGVILVSHDERLIRMVCKELWVCGGGTVTSIEGGFDEYRRIVERELAETNK
SIO_010081: LOC111058028
subclass of: SO_0000673
so part of: LOC111058028
location: complement(join(1407406..1407561,1408349..1408569,1418207..1418387,1420825..1420999,1425834..1426024,1432863..1433034,1440304..1440519,1442652..1442756,1445188..1445477,1449562..1449778,1457295..1457403,1458058..1458130))
location: region:1407406-1458130:-1
so has part: feature:1458058-1458130:-1:exon
so has part: feature:1457295-1457403:-1:exon
so has part: feature:1449562-1449778:-1:exon
so has part: feature:1445188-1445477:-1:exon
so has part: feature:1442652-1442756:-1:exon
so has part: feature:1440304-1440519:-1:exon
so has part: feature:1432863-1433034:-1:exon
so has part: feature:1425834-1426024:-1:exon
so has part: feature:1420825-1420999:-1:exon
so has part: feature:1418207-1418387:-1:exon
so has part: feature:1408349-1408569:-1:exon
so has part: feature:1407406-1407561:-1:exon

XP_039297067.1
type: Protein
SIO_000068: ncbiprotein

position:1407406:-1
position: 1407406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1458130:-1
position: 1458130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1458058-1458130:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1457295-1457403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1449562-1449778:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1445188-1445477:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1442652-1442756:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1440304-1440519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1432863-1433034:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1425834-1426024:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1420825-1420999:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1418207-1418387:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1408349-1408569:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1407406-1407561:-1:exon

LOC111058023
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111058023
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1458697..1461119)
location: region:1458697-1461119:-1
so has part: feature:1458697-1461119:-1:exon
subclass of: SO_0000010

111058023
type: Gene
SIO_000068: ncbigene

position:1458697:-1
position: 1458697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1461119:-1
position: 1461119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1458697-1461119:-1:exon

LOC111058023
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111058023
product: uncharacterized LOC111058023
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 230 long SRA reads, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_022345517.2
SIO_010081: LOC111058023
subclass of: SO_0000673
so part of: LOC111058023
location: complement(join(1458697..1460138,1460782..1461119))
location: region:1458697-1461119:-1
so has part: feature:1460782-1461119:-1:exon
so has part: feature:1458697-1460138:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1460782-1461119:-1:exon

position:1460782:-1
position: 1460782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1458697-1460138:-1:exon

position:1460138:-1
position: 1460138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111058023
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111058023
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111058023
translation: MMSRLNLIAVVCVGFAVLTAVVGLPIRSNDHNPGREDQFVMSGDTSAPGGEDLKRLRRQDDDDEEGELDPEAISEKRKKEKEEILDQLFPWWREQKAQFDAGLLQYGVRPTVHY
SIO_010081: LOC111058023
subclass of: SO_0000673
so part of: LOC111058023
location: complement(join(1459831..1460138,1460782..1460818))
location: region:1459831-1460818:-1
so has part: feature:1460782-1460818:-1:exon
so has part: feature:1459831-1460138:-1:exon

XP_022201209.2
type: Protein
SIO_000068: ncbiprotein

position:1459831:-1
position: 1459831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1460818:-1
position: 1460818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1460782-1460818:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1459831-1460138:-1:exon

LOC111058027
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111058027
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1466117..1500790
location: region:1466117-1500790:1
so has part: feature:1466117-1500790:1:exon
subclass of: SO_0000010

111058027
type: Gene
SIO_000068: ncbigene

position:1466117:1
position: 1466117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1500790:1
position: 1500790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1466117-1500790:1:exon

LOC111058027
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111058027
product: uncharacterized protein DDB_G0290685
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 long SRA reads, 6 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039441134.1
SIO_010081: LOC111058027
subclass of: SO_0000673
so part of: LOC111058027
location: join(1466117..1466189,1469927..1470680,1479034..1479378,1481509..1482559,1499880..1499927,1500420..1500790)
location: region:1466117-1500790:1
so has part: feature:1466117-1466189:1:exon
so has part: feature:1469927-1470680:1:exon
so has part: feature:1479034-1479378:1:exon
so has part: feature:1481509-1482559:1:exon
so has part: feature:1499880-1499927:1:exon
so has part: feature:1500420-1500790:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1466117-1466189:1:exon

position:1466189:1
position: 1466189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1469927-1470680:1:exon

position:1469927:1
position: 1469927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1470680:1
position: 1470680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1479034-1479378:1:exon

position:1479034:1
position: 1479034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1479378:1
position: 1479378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1481509-1482559:1:exon

position:1481509:1
position: 1481509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1482559:1
position: 1482559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1499880-1499927:1:exon

position:1499880:1
position: 1499880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1499927:1
position: 1499927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1500420-1500790:1:exon

position:1500420:1
position: 1500420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111058027
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111058027
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein DDB_G0290685
translation: MIAESYKTKNSSGGGNEPKCPAGFSGLMPHPTDCEQYLNCDAGTASIQKCGPGTVFSPDHKTCDHPENVDCSGLTQVPKTGLKEVPKTGPKEVPKTGLKEVPQTGDKKEKEKVVDPKKEKGGDTKEGNKEIGKGVDKKKEVVEKKGEDKKKEVEDKKNGKGEDKKKQVEEKKKVKREERVEKDEEEKEKDEKEKPNEKCELKPHETKGKKIQRDWLSHVSFMSKRSPADNNDNEPLISDPPMDEGEEEEGGEGEGHDVGGDDGGDGGGIDGGGEEGGDGGGIDGGGGGGGEVGGISEPLDHNKLDMIAHQIALNKLLKMKDAKRGEGQGEVGGGGGGIQNIQKREVGGGGQVEEKFGGGESLRPEVREKRYSKKGKEAKCPSGFSGLMAHPTDCDKFLNCDNGRTFIQQCGPGTLFSPDLRVCDYPQNVDCPGEEDGDGDTDKKNGTNVTGGGDKKNGTNVTGGGNKNNGTNVTGGGDKKNGTNVTGGGDKKNGTNVTGGGNKKNGTNVTGGGDKKNGTNVTGGGDKKNGTNVTGGGDKKNGTNVTGGGDKKNGTNVTGGGDKKNGTNVTGGGNKKNGTNVTGGGDKKNGTNVTGGGNKKNGTNVTGGGNKKNGTNVTGGGDKKNGTNVTGGGNKKNGTKVTGGGDKKNGTNVTGGGGKNNGTKVTGGGDKKNGTNVTGGGDKKNGTNVTGGGDKKNGTNVTGGGNKKNASNMTGGGDKNNGNKVSGGGDKNNGTTDVKGDKVTGFDNKKKNK
SIO_010081: LOC111058027
subclass of: SO_0000673
so part of: LOC111058027
location: join(1470036..1470680,1479034..1479378,1481509..1482559,1499880..1499927,1500420..1500592)
location: region:1470036-1500592:1
so has part: feature:1470036-1470680:1:exon
so has part: feature:1479034-1479378:1:exon
so has part: feature:1481509-1482559:1:exon
so has part: feature:1499880-1499927:1:exon
so has part: feature:1500420-1500592:1:exon

XP_039297068.1
type: Protein
SIO_000068: ncbiprotein

position:1470036:1
position: 1470036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1500592:1
position: 1500592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1470036-1470680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1479034-1479378:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1481509-1482559:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1499880-1499927:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1500420-1500592:1:exon

LOC111063525
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111063525
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1506310..1519626)
location: region:1506310-1519626:-1
so has part: feature:1506310-1519626:-1:exon
subclass of: SO_0000010

111063525
type: Gene
SIO_000068: ncbigene

position:1506310:-1
position: 1506310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1519626:-1
position: 1519626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1506310-1519626:-1:exon

LOC111063525
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111063525
product: zinc finger protein 525
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_039440463.1
SIO_010081: LOC111063525
subclass of: SO_0000673
so part of: LOC111063525
location: complement(join(1506310..1506879,1511667..1511822,1516625..1516937,1519593..1519626))
location: region:1506310-1519626:-1
so has part: feature:1519593-1519626:-1:exon
so has part: feature:1516625-1516937:-1:exon
so has part: feature:1511667-1511822:-1:exon
so has part: feature:1506310-1506879:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1519593-1519626:-1:exon

position:1519593:-1
position: 1519593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1516625-1516937:-1:exon

position:1516625:-1
position: 1516625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1516937:-1
position: 1516937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1511667-1511822:-1:exon

position:1511667:-1
position: 1511667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1511822:-1
position: 1511822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1506310-1506879:-1:exon

position:1506879:-1
position: 1506879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111063525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111063525
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 525
translation: MCDFRTAALAKLRCHLRLHVSPGNQLRHCPYCAYNTLHANTLRAHVRTHTGERPFKCNQCDYSTSYSTTLKTHMRIHSGEKPYKCQICDYSSTQSTNLRTHMRIHSGEKPYECNICEYRCVDSSTLLKHIKSHTGERAATEKKKPKTLTCEECGYKCAYQATMTVHMRTHTGERPYKCELCDYACTHITSYKNHMRMHTGDKPYKCAQCDFSTSHSSHLKRHSRRHTGERPYVCDVCKAGFTQKTHLDKHVRTQHRTDTVQA
SIO_010081: LOC111063525
subclass of: SO_0000673
so part of: LOC111063525
location: complement(join(1506447..1506879,1511667..1511822,1516625..1516824))
location: region:1506447-1516824:-1
so has part: feature:1516625-1516824:-1:exon
so has part: feature:1511667-1511822:-1:exon
so has part: feature:1506447-1506879:-1:exon

XP_039296397.1
type: Protein
SIO_000068: ncbiprotein

position:1506447:-1
position: 1506447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1516824:-1
position: 1516824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1516625-1516824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1511667-1511822:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1506447-1506879:-1:exon

LOC120354256
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1582830..1604243)
location: region:1582830-1604243:-1
so has part: feature:1582830-1604243:-1:exon
subclass of: SO_0000010

120354256
type: Gene
SIO_000068: ncbigene

position:1582830:-1
position: 1582830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1604243:-1
position: 1604243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1582830-1604243:-1:exon

LOC120354256
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354256
product: patched domain-containing protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 long SRA reads, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039441135.1
SIO_010081: LOC120354256
subclass of: SO_0000673
so part of: LOC120354256
location: complement(join(1582830..1585777,1586683..1586892,1588992..1589204,1593533..1593740,1597138..1597243,1598600..1598731,1599057..1599257,1601749..1601884,1603116..1603323,1604173..1604243))
location: region:1582830-1604243:-1
so has part: feature:1604173-1604243:-1:exon
so has part: feature:1603116-1603323:-1:exon
so has part: feature:1601749-1601884:-1:exon
so has part: feature:1599057-1599257:-1:exon
so has part: feature:1598600-1598731:-1:exon
so has part: feature:1597138-1597243:-1:exon
so has part: feature:1593533-1593740:-1:exon
so has part: feature:1588992-1589204:-1:exon
so has part: feature:1586683-1586892:-1:exon
so has part: feature:1582830-1585777:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1604173-1604243:-1:exon

position:1604173:-1
position: 1604173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1603116-1603323:-1:exon

position:1603116:-1
position: 1603116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1603323:-1
position: 1603323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1601749-1601884:-1:exon

position:1601749:-1
position: 1601749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1601884:-1
position: 1601884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1599057-1599257:-1:exon

position:1599057:-1
position: 1599057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1599257:-1
position: 1599257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1598600-1598731:-1:exon

position:1598600:-1
position: 1598600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1598731:-1
position: 1598731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1597138-1597243:-1:exon

position:1597138:-1
position: 1597138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1597243:-1
position: 1597243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1593533-1593740:-1:exon

position:1593533:-1
position: 1593533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1593740:-1
position: 1593740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1588992-1589204:-1:exon

position:1588992:-1
position: 1588992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1589204:-1
position: 1589204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1586683-1586892:-1:exon

position:1586683:-1
position: 1586683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1586892:-1
position: 1586892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1582830-1585777:-1:exon

position:1585777:-1
position: 1585777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354256
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: patched domain-containing protein 3-like
translation: MAIPTLTYGSEAWVLTRKLESRIQGARWEEAFLDAVGEAEDAGRFKHISTSRFASRTLDIELEKNTQSVVPYFGSTFVIMAVFSTITSMMLDWVRSKPLLGLLGNISAAMGTVSGFGLAVYFGIPFIGINLVSPLLMCSIGIDDTFVMLAAWRRTPVTLPVPERVARTLSEAAVSITITSVTDIVSLTIGILSPFPAIQIFCLYSSFAVAFIFVWHITFFAGCMAIAGYAEQNNRHSITCVKVAPLSMSGKRSWLYRAFCSGGINPKDPDNPIDNPENALMAFFRDTLTYYLNKWQVKMLILLVFMAYLAGACYGITCIKEGLQRRKLSKADSYSIEFYDREDFYFREFPYRMQVILSGPLNYSDPVVQQEVENLTRTFEASPYISTSLYTESWLRSFVSYVERNADYLNVSISTEPDFIKALHEIWLFKPNPFSLDVKFSDDGSQIVASRFMIQAVNISDGNAEKDMVRDLRRICHESHLNVSVFHPYFVYFDQFELVRPTSIQAMIVGAVIMMIISFIFIPNILCSLWVAFCIVSIETGVAGYMSLWSVNLDTISMINLIMCIGFSVDFTAHICYAYMSSKAELPEEKLRESLHSLGLPIFQGAISTILGVAALVLADSYIFLVFFKMIFLVVFFGAIHGILLLPVLLTMFGPNSCGRSKQRREMSEIEKTFPHPYCIPHPSLTGALNHPLAHFQGKQLGGPHHHHFGGVPLHGLAADIPPSRLVISSYNGDTCGKFVLDKDQGLGTSGEDSSESSSSKSHPHQKQVPKKMVAEDEDEKQRRKYVEGWRKSSAPGQGLSRSPEGRSRSPTDLQGHPRSQDYQGQAHQGHPRSSLNEGHLRSSQDFPRSSPNEGHLRSSQDFSRSSNDGHPKGRGVPEGHPRSSAQGHSRTNGGYMSDEDSSPKWRPPHPASQLNFRASRSHHYSPKSGATPQGRNSSSAFVGESRFP
SIO_010081: LOC120354256
subclass of: SO_0000673
so part of: LOC120354256
location: complement(join(1584413..1585777,1586683..1586892,1588992..1589204,1593533..1593740,1597138..1597243,1598600..1598731,1599057..1599257,1601749..1601884,1603116..1603323,1604173..1604243))
location: region:1584413-1604243:-1
so has part: feature:1604173-1604243:-1:exon
so has part: feature:1603116-1603323:-1:exon
so has part: feature:1601749-1601884:-1:exon
so has part: feature:1599057-1599257:-1:exon
so has part: feature:1598600-1598731:-1:exon
so has part: feature:1597138-1597243:-1:exon
so has part: feature:1593533-1593740:-1:exon
so has part: feature:1588992-1589204:-1:exon
so has part: feature:1586683-1586892:-1:exon
so has part: feature:1584413-1585777:-1:exon

XP_039297069.1
type: Protein
SIO_000068: ncbiprotein

position:1584413:-1
position: 1584413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1604173-1604243:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1603116-1603323:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1601749-1601884:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1599057-1599257:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1598600-1598731:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1597138-1597243:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1593533-1593740:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1588992-1589204:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1586683-1586892:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1584413-1585777:-1:exon

LOC120354140
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354140
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1606590..1614597)
location: region:1606590-1614597:-1
so has part: feature:1606590-1614597:-1:exon
subclass of: SO_0000010

120354140
type: Gene
SIO_000068: ncbigene

position:1606590:-1
position: 1606590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1614597:-1
position: 1614597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1606590-1614597:-1:exon

LOC120354140
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354140
product: patched domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_039440464.1
SIO_010081: LOC120354140
subclass of: SO_0000673
so part of: LOC120354140
location: complement(join(1606590..1606723,1610033..1610254,1611641..1611786,1614461..1614597))
location: region:1606590-1614597:-1
so has part: feature:1614461-1614597:-1:exon
so has part: feature:1611641-1611786:-1:exon
so has part: feature:1610033-1610254:-1:exon
so has part: feature:1606590-1606723:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1614461-1614597:-1:exon

position:1614461:-1
position: 1614461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1611641-1611786:-1:exon

position:1611641:-1
position: 1611641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1611786:-1
position: 1611786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1610033-1610254:-1:exon

position:1610033:-1
position: 1610033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1610254:-1
position: 1610254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1606590-1606723:-1:exon

position:1606723:-1
position: 1606723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354140
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: patched domain-containing protein 1-like
translation: MGCRCKTFVDDTLTKLFYKLGLQVGRTPGYFIIIPILLTLLCITGYQRIQYEMDPEYLFSPEEGPGKTERAIVEHYFKMNYSSRFNPTRITRAGRFGRVIVIPRDGGDNLLSVEAWRELRDLDAICEKCKHSVWGGQNQLQI
SIO_010081: LOC120354140
subclass of: SO_0000673
so part of: LOC120354140
location: complement(join(1610106..1610254,1611641..1611786,1614461..1614594))
location: region:1610106-1614594:-1
so has part: feature:1614461-1614594:-1:exon
so has part: feature:1611641-1611786:-1:exon
so has part: feature:1610106-1610254:-1:exon

XP_039296398.1
type: Protein
SIO_000068: ncbiprotein

position:1610106:-1
position: 1610106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1614594:-1
position: 1614594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1614461-1614594:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1611641-1611786:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1610106-1610254:-1:exon

LOC111058029
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111058029
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1617712..1618472
location: region:1617712-1618472:1
so has part: feature:1617712-1618472:1:exon
subclass of: SO_0000010

111058029
type: Gene
SIO_000068: ncbigene

position:1617712:1
position: 1617712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1618472:1
position: 1618472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1617712-1618472:1:exon

LOC111058029
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111058029
product: vicilin-like seed storage protein At2g18540
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 922 long SRA reads, 1 Protein, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_022345525.2
SIO_010081: LOC111058029
subclass of: SO_0000673
so part of: LOC111058029
location: 1617712..1618472
location: region:1617712-1618472:1
so has part: feature:1617712-1618472:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1617712-1618472:1:exon

LOC111058029
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111058029
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vicilin-like seed storage protein At2g18540
translation: MEGGGEGGAMRGEEETEGETKSRKRRSPENRNLKNPSHFLGLAGSDDIEWKREQEEKEKWKRRQEEKERRTEQEEKENSRKRRSPENRNFKNPSHFLGLAGSDDIEWKRRQEEKERRTEEQENEREMEKDDKYRDKKEGEEEEFQRKLEEEERKSRTKQDAWEKKNEEAEKTWKEVVKNWGKEGRRDDNYTGGRKK
SIO_010081: LOC111058029
subclass of: SO_0000673
so part of: LOC111058029
location: 1617809..1618399
location: region:1617809-1618399:1
so has part: feature:1617809-1618399:1:exon

XP_022201217.2
type: Protein
SIO_000068: ncbiprotein

position:1617809:1
position: 1617809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1618399:1
position: 1618399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1617809-1618399:1:exon

LOC111058025
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111058025
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1631825..1641005)
location: region:1631825-1641005:-1
so has part: feature:1631825-1641005:-1:exon
subclass of: SO_0000010

111058025
type: Gene
SIO_000068: ncbigene

position:1631825:-1
position: 1631825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1641005:-1
position: 1641005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1631825-1641005:-1:exon

LOC111058025
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111058025
product: uncharacterized LOC111058025
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 150 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_022345520.2
SIO_010081: LOC111058025
subclass of: SO_0000673
so part of: LOC111058025
location: complement(join(1631825..1634797,1639687..1639744,1640767..1641005))
location: region:1631825-1641005:-1
so has part: feature:1640767-1641005:-1:exon
so has part: feature:1639687-1639744:-1:exon
so has part: feature:1631825-1634797:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1640767-1641005:-1:exon

position:1640767:-1
position: 1640767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1639687-1639744:-1:exon

position:1639687:-1
position: 1639687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1639744:-1
position: 1639744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1631825-1634797:-1:exon

position:1634797:-1
position: 1634797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111058025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111058025
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111058025
translation: MDGRKIFLLILEICLLIHNCIANSSINQGENRIGVRERRSVNKNECLALQVSTNPQLHTFGQTFTELASGLNKIPKNFKGDVILFVGNTGAGKSSLVHILAGEGATFVGKEIGEDTGDYYIEDTSGKFVTNTTISSTTTYPEAVVDATSGAVLFDTPGFRDTRSAIHEIVATYGLHSVAEMSKRIKIALLVNHNSLTPSGPRDDFTNTLESFFSLFNNTHKFQESTYLIATKTPNQHIIRHGKITRVTAETQIKGVSQFLKGVSNTLDNREGNYVNEKFIKNAQALIHSLEGKIALFMKPDDSGPVLESHSIQQSIKSIREMLLSKDGYVEVEVGDFGFAVSDRAKVYIRELYDLMNNHIVEVSKSFAVSFNKFVTTHFKSFGDIQTIKNHLQSTVQHVGHLIQKTKVSTTPSDYVDAIINLADGIQMEFCSRHVLTEIKQLDGYLDGLKKITDHNRYDPSKWSNSLHPLERSVQNELMFYNLIDNLYKKVTDYSVIFKDPTVLRLKHETEFRMPILMAEKFIKHLGLTQFKITSDKLEEVNSFLKKIVGKESIFLSKSNTVVVVDSVLKTSGLHLDKLGKGRLSKTVVLVALRKLYIDSDLVMKGWNLIVIAPEWHVLGKFTLSVDGKDPSATYRGQASPGEHGKDGASGSSAGNFLGVALHYFNSHQLTISASGGNGERGQDGGDGKDGRDGQDDFYPRRWIDDNDSESISPLFNFANSWSDTYIRRADYGSDGGDAGQGGRGGLGGSSGSIKTVQLHSFSPDRSTHRLQDGIKGRDGVNGRPGKGGLRGCDIIDEEYERRILFFTTSRGKKSRFVDCHRRRNFDGTIRPRGPNFQVRPTAVPQPPSICLQYNEVKHLFQDNNDIVSHSTTVEFQNSFKKHFGCY
SIO_010081: LOC111058025
subclass of: SO_0000673
so part of: LOC111058025
location: complement(join(1632266..1634797,1639687..1639744,1640767..1640840))
location: region:1632266-1640840:-1
so has part: feature:1640767-1640840:-1:exon
so has part: feature:1639687-1639744:-1:exon
so has part: feature:1632266-1634797:-1:exon

XP_022201212.2
type: Protein
SIO_000068: ncbiprotein

position:1632266:-1
position: 1632266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1640840:-1
position: 1640840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1640767-1640840:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1639687-1639744:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1632266-1634797:-1:exon

LOC120348914
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120348914
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1642679..1660089
location: region:1642679-1660089:1
so has part: feature:1642679-1660089:1:exon
subclass of: SO_0000010

120348914
type: Gene
SIO_000068: ncbigene

position:1642679:1
position: 1642679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1660089:1
position: 1660089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1642679-1660089:1:exon

LOC120348914
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120348914
product: zinc finger protein 525-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_039440467.1
SIO_010081: LOC120348914
subclass of: SO_0000673
so part of: LOC120348914
location: join(1642679..1642854,1644850..1644965,1647923..1648045,1651428..1651491,1653483..1653795,1655940..1656095,1659655..1660089)
location: region:1642679-1660089:1
so has part: feature:1642679-1642854:1:exon
so has part: feature:1644850-1644965:1:exon
so has part: feature:1647923-1648045:1:exon
so has part: feature:1651428-1651491:1:exon
so has part: feature:1653483-1653795:1:exon
so has part: feature:1655940-1656095:1:exon
so has part: feature:1659655-1660089:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1642679-1642854:1:exon

position:1642854:1
position: 1642854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1644850-1644965:1:exon

position:1644850:1
position: 1644850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1644965:1
position: 1644965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1647923-1648045:1:exon

position:1647923:1
position: 1647923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1648045:1
position: 1648045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1651428-1651491:1:exon

position:1651428:1
position: 1651428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1651491:1
position: 1651491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1653483-1653795:1:exon

position:1653483:1
position: 1653483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1653795:1
position: 1653795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1655940-1656095:1:exon

position:1655940:1
position: 1655940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1656095:1
position: 1656095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1659655-1660089:1:exon

position:1659655:1
position: 1659655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120348914
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120348914
product: zinc finger protein 525-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_039440466.1
SIO_010081: LOC120348914
subclass of: SO_0000673
so part of: LOC120348914
location: join(1642681..1642854,1644845..1644965,1647923..1648045,1651428..1651491,1653483..1653795,1655940..1656095,1659655..1660089)
location: region:1642681-1660089:1
so has part: feature:1642681-1642854:1:exon
so has part: feature:1644845-1644965:1:exon
so has part: feature:1647923-1648045:1:exon
so has part: feature:1651428-1651491:1:exon
so has part: feature:1653483-1653795:1:exon
so has part: feature:1655940-1656095:1:exon
so has part: feature:1659655-1660089:1:exon

position:1642681:1
position: 1642681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1642681-1642854:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1644845-1644965:1:exon

position:1644845:1
position: 1644845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1647923-1648045:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1651428-1651491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1653483-1653795:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1655940-1656095:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1659655-1660089:1:exon

LOC120348914
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120348914
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 525-like
translation: MYEEENSVEKEAAMDVALAAGLLEPTCVIQEGTFPDPGKVGFDGNIVVKRENLDEHDNPVNEDTADQYQTQAVEDENTGEGSSWTHPNAASTESSTSKPRDKWTKGGPLNKNPTEVSAKLSELAERFACTMCDFRTAALAKLRCHLRLHVSPGNQLRHCPYCAYNTLHANTLRAHVRTHTGERPFKCNQCDYSTSYSTTLKTHMRIHSGEKPYKCQICDYSSTQSTNLRTHMRIHSGEKPYECNICEYRCVDSSTLLKHIKSHTGERAATEKKKPKTLTCEECGYKCAYQATMTVHMRTHTGERPYKCELCDYACTHITSYKNHMRMHTGDKPYKCAQCDFSTSHSSHLKRHSRRHTGERPYVCDVCKAGFTQKTHLDKHVRTQHRTDTVQA
SIO_010081: LOC120348914
subclass of: SO_0000673
so part of: LOC120348914
location: join(1644876..1644965,1647923..1648045,1651428..1651491,1653483..1653795,1655940..1656095,1659655..1660087)
location: region:1644876-1660087:1
so has part: feature:1644876-1644965:1:exon
so has part: feature:1647923-1648045:1:exon
so has part: feature:1651428-1651491:1:exon
so has part: feature:1653483-1653795:1:exon
so has part: feature:1655940-1656095:1:exon
so has part: feature:1659655-1660087:1:exon

XP_039296400.1
type: Protein
SIO_000068: ncbiprotein

position:1644876:1
position: 1644876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1660087:1
position: 1660087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1644876-1644965:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1647923-1648045:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1651428-1651491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1653483-1653795:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655940-1656095:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1659655-1660087:1:exon

LOC120348914
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120348914
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 525-like
translation: MYEEENSVEKEAAMDVALAAGLLEPTCVIQEGTFPDPGKVGFDGNIVVKRENLDEHDNPVNEDTADQYQTQAVEDENTGEGSSWTHPNAASTESSTSKPRDKWTKGGPLNKNPTEVSAKLSELAERFACTMCDFRTAALAKLRCHLRLHVSPGNQLRHCPYCAYNTLHANTLRAHVRTHTGERPFKCNQCDYSTSYSTTLKTHMRIHSGEKPYKCQICDYSSTQSTNLRTHMRIHSGEKPYECNICEYRCVDSSTLLKHIKSHTGERAATEKKKPKTLTCEECGYKCAYQATMTVHMRTHTGERPYKCELCDYACTHITSYKNHMRMHTGDKPYKCAQCDFSTSHSSHLKRHSRRHTGERPYVCDVCKAGFTQKTHLDKHVRTQHRTDTVQA
SIO_010081: LOC120348914
subclass of: SO_0000673
so part of: LOC120348914
location: join(1644876..1644965,1647923..1648045,1651428..1651491,1653483..1653795,1655940..1656095,1659655..1660087)
location: region:1644876-1660087:1
so has part: feature:1644876-1644965:1:exon
so has part: feature:1647923-1648045:1:exon
so has part: feature:1651428-1651491:1:exon
so has part: feature:1653483-1653795:1:exon
so has part: feature:1655940-1656095:1:exon
so has part: feature:1659655-1660087:1:exon

XP_039296401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1644876-1644965:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1647923-1648045:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1651428-1651491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1653483-1653795:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655940-1656095:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1659655-1660087:1:exon

LOC111052755
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111052755
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1677897..1735083)
location: region:1677897-1735083:-1
so has part: feature:1677897-1735083:-1:exon
subclass of: SO_0000010

111052755
type: Gene
SIO_000068: ncbigene

position:1677897:-1
position: 1677897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1735083:-1
position: 1735083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1677897-1735083:-1:exon

LOC111052755
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111052755
product: ecdysone receptor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 94 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_039440469.1
SIO_010081: LOC111052755
subclass of: SO_0000673
so part of: LOC111052755
location: complement(join(1677897..1678535,1681827..1682049,1685121..1685270,1687193..1687441,1689096..1689223,1693071..1693211,1698195..1698395,1717890..1719087,1734948..1735083))
location: region:1677897-1735083:-1
so has part: feature:1734948-1735083:-1:exon
so has part: feature:1717890-1719087:-1:exon
so has part: feature:1698195-1698395:-1:exon
so has part: feature:1693071-1693211:-1:exon
so has part: feature:1689096-1689223:-1:exon
so has part: feature:1687193-1687441:-1:exon
so has part: feature:1685121-1685270:-1:exon
so has part: feature:1681827-1682049:-1:exon
so has part: feature:1677897-1678535:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1734948-1735083:-1:exon

position:1734948:-1
position: 1734948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1717890-1719087:-1:exon

position:1717890:-1
position: 1717890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1719087:-1
position: 1719087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1698195-1698395:-1:exon

position:1698195:-1
position: 1698195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1698395:-1
position: 1698395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1693071-1693211:-1:exon

position:1693071:-1
position: 1693071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1693211:-1
position: 1693211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1689096-1689223:-1:exon

position:1689096:-1
position: 1689096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1689223:-1
position: 1689223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1687193-1687441:-1:exon

position:1687193:-1
position: 1687193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1687441:-1
position: 1687441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1685121-1685270:-1:exon

position:1685121:-1
position: 1685121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1685270:-1
position: 1685270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1681827-1682049:-1:exon

position:1681827:-1
position: 1681827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1682049:-1
position: 1682049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1677897-1678535:-1:exon

position:1678535:-1
position: 1678535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111052755
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111052755
product: ecdysone receptor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 99 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_039440468.1
SIO_010081: LOC111052755
subclass of: SO_0000673
so part of: LOC111052755
location: complement(join(1677897..1678535,1681827..1682049,1685121..1685270,1687193..1687441,1689096..1689223,1693071..1693211,1698195..1698395,1715768..1717069))
location: region:1677897-1717069:-1
so has part: feature:1715768-1717069:-1:exon
so has part: feature:1698195-1698395:-1:exon
so has part: feature:1693071-1693211:-1:exon
so has part: feature:1689096-1689223:-1:exon
so has part: feature:1687193-1687441:-1:exon
so has part: feature:1685121-1685270:-1:exon
so has part: feature:1681827-1682049:-1:exon
so has part: feature:1677897-1678535:-1:exon

position:1717069:-1
position: 1717069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1715768-1717069:-1:exon

position:1715768:-1
position: 1715768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1698195-1698395:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1693071-1693211:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1689096-1689223:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1687193-1687441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1685121-1685270:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1681827-1682049:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1677897-1678535:-1:exon

LOC111052755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111052755
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ecdysone receptor isoform X2
translation: MATSIWIRHHRSGGTVSTPADDKVVCSAEVTSSSRSIGPEVSSSASLAMTSSPANSLGGSSASDIGDVDLEFFDLDLVGGGGGGVGGLGGGGGVVMGHHLHQAGLAMLQQRMMMSQHGFHQQSQHQGGLHHGGTTTLVRAAVAHVSSNVSDSGSVSGREDLSPPSSLNGYGGGGGPGGGSMDPSELAKKKKGPVPRQQEELCLVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYQCKYGNNCEIDMYMRRKCQECRLKKCLSVGMRPECVVPEYQCAVKRKEKRDMKDKTRPNSTTSRSPEALKIEPESQRMCDFSVELESGNTLGASSNTGGLGAGPPSVGGSLSPPLTAGGVKPVSSEQEELIHRLVYFQNEFEHPSEEDLKRIGCLNLPSQVAQDQQAESDMRFRHITEITILTVQLIVEFAKRLPGFDKLLREDQIVLLKACSSEVMMLRTARKYDVNTDSILFANNQPYTRDSYTLAGMGYVVEDLLQFCRHMYRMKVDNAEYALLTAIVIFSDRPSLLEAWKVEKIQEIYLEALKSYVDNRIRPKSSPIFAKLLSVLTELRTLGNQNSQMCFSLKLKNKKLPDFLMEIWDVDMEKEKENEKKKAAAENNNSMSSSTS
SIO_010081: LOC111052755
subclass of: SO_0000673
so part of: LOC111052755
location: complement(join(1678219..1678535,1681827..1682049,1685121..1685270,1687193..1687441,1689096..1689223,1693071..1693211,1698195..1698395,1717890..1718358))
location: region:1678219-1718358:-1
so has part: feature:1717890-1718358:-1:exon
so has part: feature:1698195-1698395:-1:exon
so has part: feature:1693071-1693211:-1:exon
so has part: feature:1689096-1689223:-1:exon
so has part: feature:1687193-1687441:-1:exon
so has part: feature:1685121-1685270:-1:exon
so has part: feature:1681827-1682049:-1:exon
so has part: feature:1678219-1678535:-1:exon

XP_039296403.1
type: Protein
SIO_000068: ncbiprotein

position:1678219:-1
position: 1678219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1718358:-1
position: 1718358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1717890-1718358:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1698195-1698395:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1693071-1693211:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1689096-1689223:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1687193-1687441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1685121-1685270:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1681827-1682049:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1678219-1678535:-1:exon

LOC111052755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111052755
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ecdysone receptor isoform X1
translation: MATSIWIRHHRSGGTVSTPADDKVVCSAEVTSSSRSIGPEVSSSASLAMTSSPANSLGGSSASDIGDVDLEFFDLDLVGGGGGGGVGGLGGGGGVVMGHHLHQAGLAMLQQRMMMSQHGFHQQSQHQGGLHHGGTTTLVRAAVAHVSSNVSDSGSVSGREDLSPPSSLNGYGGGGGPGGGSMDPSELAKKKKGPVPRQQEELCLVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYQCKYGNNCEIDMYMRRKCQECRLKKCLSVGMRPECVVPEYQCAVKRKEKRDMKDKTRPNSTTSRSPEALKIEPESQRMCDFSVELESGNTLGASSNTGGLGAGPPSVGGSLSPPLTAGGVKPVSSEQEELIHRLVYFQNEFEHPSEEDLKRIGCLNLPSQVAQDQQAESDMRFRHITEITILTVQLIVEFAKRLPGFDKLLREDQIVLLKACSSEVMMLRTARKYDVNTDSILFANNQPYTRDSYTLAGMGYVVEDLLQFCRHMYRMKVDNAEYALLTAIVIFSDRPSLLEAWKVEKIQEIYLEALKSYVDNRIRPKSSPIFAKLLSVLTELRTLGNQNSQMCFSLKLKNKKLPDFLMEIWDVDMEKEKENEKKKAAAENNNSMSSSTS
SIO_010081: LOC111052755
subclass of: SO_0000673
so part of: LOC111052755
location: complement(join(1678219..1678535,1681827..1682049,1685121..1685270,1687193..1687441,1689096..1689223,1693071..1693211,1698195..1698395,1715768..1716239))
location: region:1678219-1716239:-1
so has part: feature:1715768-1716239:-1:exon
so has part: feature:1698195-1698395:-1:exon
so has part: feature:1693071-1693211:-1:exon
so has part: feature:1689096-1689223:-1:exon
so has part: feature:1687193-1687441:-1:exon
so has part: feature:1685121-1685270:-1:exon
so has part: feature:1681827-1682049:-1:exon
so has part: feature:1678219-1678535:-1:exon

XP_039296402.1
type: Protein
SIO_000068: ncbiprotein

position:1716239:-1
position: 1716239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1715768-1716239:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1698195-1698395:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1693071-1693211:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1689096-1689223:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1687193-1687441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1685121-1685270:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1681827-1682049:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1678219-1678535:-1:exon

LOC120354141
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1755643..1792745
location: region:1755643-1792745:1
so has part: feature:1755643-1792745:1:exon
subclass of: SO_0000010

120354141
type: Gene
SIO_000068: ncbigene

position:1755643:1
position: 1755643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1792745:1
position: 1792745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1755643-1792745:1:exon

LOC120354141
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354141
product: putative uncharacterized protein DDB_G0290521
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_039440470.1
SIO_010081: LOC120354141
subclass of: SO_0000673
so part of: LOC120354141
location: join(1755643..1755708,1791953..1792745)
location: region:1755643-1792745:1
so has part: feature:1755643-1755708:1:exon
so has part: feature:1791953-1792745:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1755643-1755708:1:exon

position:1755708:1
position: 1755708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1791953-1792745:1:exon

position:1791953:1
position: 1791953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120354141
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein DDB_G0290521
translation: MELKLALYPAHNLPPLPNPLQDLQTKSTLLQRLPSTPTLQQNLPTEPTQLRNLSPLPNPHQNLQRTSTLLQNLPSDPTPLQNLPTEPTQLQNLSPEPNLLLNPQTQPTQLQNLSPKHILHQNLHPEPTLSQNSQSESTHATTTMLVKREQLDDTTPLRGGSPRGSPTPQGGLRGSSWPPSPRDMTPSYGGGGTPLNGYPSPTMSSQHSNYDSCLSPNSKIGESVDNFYIFS
SIO_010081: LOC120354141
subclass of: SO_0000673
so part of: LOC120354141
location: 1792035..1792730
location: region:1792035-1792730:1
so has part: feature:1792035-1792730:1:exon

XP_039296404.1
type: Protein
SIO_000068: ncbiprotein

position:1792035:1
position: 1792035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1792730:1
position: 1792730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1792035-1792730:1:exon

LOC111053768
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111053768
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1864360..1898366
location: region:1864360-1898366:1
so has part: feature:1864360-1898366:1:exon
subclass of: SO_0000010

111053768
type: Gene
SIO_000068: ncbigene

position:1864360:1
position: 1864360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1898366:1
position: 1898366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1864360-1898366:1:exon

LOC111053768
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111053768
product: patched domain-containing protein 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 9 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039441136.1
SIO_010081: LOC111053768
subclass of: SO_0000673
so part of: LOC111053768
location: join(1864360..1864522,1866498..1866643,1868979..1869199,1870837..1871018,1879269..1879476,1880752..1880887,1883030..1883230,1886787..1886891,1889724..1889931,1891128..1891337,1895882..1896091,1897001..1898366)
location: region:1864360-1898366:1
so has part: feature:1864360-1864522:1:exon
so has part: feature:1866498-1866643:1:exon
so has part: feature:1868979-1869199:1:exon
so has part: feature:1870837-1871018:1:exon
so has part: feature:1879269-1879476:1:exon
so has part: feature:1880752-1880887:1:exon
so has part: feature:1883030-1883230:1:exon
so has part: feature:1886787-1886891:1:exon
so has part: feature:1889724-1889931:1:exon
so has part: feature:1891128-1891337:1:exon
so has part: feature:1895882-1896091:1:exon
so has part: feature:1897001-1898366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1864360-1864522:1:exon

position:1864522:1
position: 1864522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1866498-1866643:1:exon

position:1866498:1
position: 1866498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1866643:1
position: 1866643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1868979-1869199:1:exon

position:1868979:1
position: 1868979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1869199:1
position: 1869199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1870837-1871018:1:exon

position:1870837:1
position: 1870837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1871018:1
position: 1871018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1879269-1879476:1:exon

position:1879269:1
position: 1879269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1879476:1
position: 1879476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1880752-1880887:1:exon

position:1880752:1
position: 1880752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1880887:1
position: 1880887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1883030-1883230:1:exon

position:1883030:1
position: 1883030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1883230:1
position: 1883230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1886787-1886891:1:exon

position:1886787:1
position: 1886787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1886891:1
position: 1886891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1889724-1889931:1:exon

position:1889724:1
position: 1889724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1889931:1
position: 1889931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1891128-1891337:1:exon

position:1891128:1
position: 1891128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1891337:1
position: 1891337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1895882-1896091:1:exon

position:1895882:1
position: 1895882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1896091:1
position: 1896091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1897001-1898366:1:exon

position:1897001:1
position: 1897001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111053768
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111053768
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: patched domain-containing protein 3
translation: MGCRCKTFVDDTLTKLFYKLGLQVGRTPGYFIIIPILLTLLCITGYQRIQYEMDPEYLFSPEEGPGKTERAIVEHYFKMNYSSRFNPTRITRAGRFGRVIVIPRDGGDNLLSVEAWRELRDLDAIVRNASIVFGEDRISYRYDDICAKWVDHCFENDILNLDLIMDEVVNRTLNLTFPIMFNPITWDAHTFPVYFGGTVVSDDGLIVSVPSLQLVYFVTADTPTQDQRGARWEEAFLDAVGEAEDAGRFKHISTSRFASRTLDIELEKNTQSVVPYFGSTFVIMAVFSTITSMMLDWVRSKPLLGLLGNISAAMGTVSGFGLAVYFGIPFIGINLVSPLLMCSIGIDDTFVMLAAWRRTPVTLPVPERVARTLSEAAVSITITSVTDIVSLTIGILSPFPAIQIFCLYSRKRSWLYRAFCSXGINPKDPDNPIDNPENALMAFFRDTLTYYLNKWQVKMLILLVFMAYLAGACYGITCIKEGLQRRKLSKADSYSIEFYDREDFYFREFPYRMQVILSGPLNYSDPLVQQVENLTRTFEASPYISTSLYTESWLRSFVSYVERNADYLNVSISTEPDFIKALHEIWLFKPNPFSLDVKFSDDGSQIVASRFMIQAVNISDGNAEKDMVRDLRRICHESHLNVSVFHPYFVYFDQFELVRPTSIQAMIVGAVIMMIISFIFIPNILCSLWVAFCIVSIETGVAGYMSLWSVNLDTISMINLIMCIGFSVDFTAHICYAYMSSKAELPEEKLRESLHSLGLPIFQGAISTILGVAALVLADSYIFLVFFKMIFLVVFFGAIHGILLLPVLLTMFGPNSCGRSKQRREMSEIEKTFPHPYCIPHPSLTGALNHPLAHFQGKQLGGPHHHHFGGVPLHGLAADIPPSRLVISSYNGDTCGKFVLDKDQGLGTSGEDSSESSSSKSHPHQKQVPKKMVAEDEDEKQRRKYVEGWRKSSAPGQGLSRSPEGRSRSPTDLQGHPRSQDYQGQAHQGHPRSSLNEGHLRSSQDFPRSSPNEGHLRSSQDFSRSSNDGHPKGRGAPEGHPRSSAQGHSRTNGGYMSDEDSSPKWRPPHPASQLNFRASRSHHYSPKSGATPQGRNSSSAFVGESRFP
SIO_010081: LOC111053768
subclass of: SO_0000673
so part of: LOC111053768
location: join(1864389..1864522,1866498..1866643,1868979..1869199,1870837..1871018,1879269..1879476,1880752..1880887,1883030..1883230,1886787..1886891,1889724..1889931,1891128..1891337,1895882..1896091,1897001..1898366)
location: region:1864389-1898366:1
so has part: feature:1864389-1864522:1:exon
so has part: feature:1866498-1866643:1:exon
so has part: feature:1868979-1869199:1:exon
so has part: feature:1870837-1871018:1:exon
so has part: feature:1879269-1879476:1:exon
so has part: feature:1880752-1880887:1:exon
so has part: feature:1883030-1883230:1:exon
so has part: feature:1886787-1886891:1:exon
so has part: feature:1889724-1889931:1:exon
so has part: feature:1891128-1891337:1:exon
so has part: feature:1895882-1896091:1:exon
so has part: feature:1897001-1898366:1:exon

XP_039297070.1
type: Protein
SIO_000068: ncbiprotein

position:1864389:1
position: 1864389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1864389-1864522:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1866498-1866643:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1868979-1869199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1870837-1871018:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1879269-1879476:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1880752-1880887:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1883030-1883230:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1886787-1886891:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1889724-1889931:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1891128-1891337:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1895882-1896091:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1897001-1898366:1:exon

LOC120354142
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354142
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1928447..1933769
location: region:1928447-1933769:1
so has part: feature:1928447-1933769:1:exon
subclass of: SO_0000011

120354142
type: Gene
SIO_000068: ncbigene

position:1928447:1
position: 1928447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1933769:1
position: 1933769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1928447-1933769:1:exon

LOC120354142
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC120354142
product: uncharacterized LOC120354142
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XR_005572834.1
SIO_010081: LOC120354142
subclass of: SO_0000673
so part of: LOC120354142
location: join(1928447..1930999,1931303..1933769)
location: region:1928447-1933769:1
so has part: feature:1928447-1930999:1:exon
so has part: feature:1931303-1933769:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1928447-1930999:1:exon

position:1930999:1
position: 1930999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1931303-1933769:1:exon

position:1931303:1
position: 1931303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120354149
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354149
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1952973..1959960)
location: region:1952973-1959960:-1
so has part: feature:1952973-1959960:-1:exon
subclass of: SO_0000011

120354149
type: Gene
SIO_000068: ncbigene

position:1952973:-1
position: 1952973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1959960:-1
position: 1959960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1952973-1959960:-1:exon

LOC120354149
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC120354149
product: uncharacterized LOC120354149
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XR_005572837.1
SIO_010081: LOC120354149
subclass of: SO_0000673
so part of: LOC120354149
location: complement(join(1952973..1953085,1959104..1959230,1959783..1959960))
location: region:1952973-1959960:-1
so has part: feature:1959783-1959960:-1:exon
so has part: feature:1959104-1959230:-1:exon
so has part: feature:1952973-1953085:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1959783-1959960:-1:exon

position:1959783:-1
position: 1959783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1959104-1959230:-1:exon

position:1959104:-1
position: 1959104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1959230:-1
position: 1959230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1952973-1953085:-1:exon

position:1953085:-1
position: 1953085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111058816
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111058816
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1990816..2009171)
location: region:1990816-2009171:-1
so has part: feature:1990816-2009171:-1:exon
subclass of: SO_0000010

111058816
type: Gene
SIO_000068: ncbigene

position:1990816:-1
position: 1990816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2009171:-1
position: 2009171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1990816-2009171:-1:exon

LOC111058816
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111058816
product: cyclin-dependent-like kinase 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 49 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_039440472.1
SIO_010081: LOC111058816
subclass of: SO_0000673
so part of: LOC111058816
location: complement(join(1990816..1991050,1994965..1995134,1996516..1996687,2000370..2000457,2007033..2007315,2008826..2009171))
location: region:1990816-2009171:-1
so has part: feature:2008826-2009171:-1:exon
so has part: feature:2007033-2007315:-1:exon
so has part: feature:2000370-2000457:-1:exon
so has part: feature:1996516-1996687:-1:exon
so has part: feature:1994965-1995134:-1:exon
so has part: feature:1990816-1991050:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2008826-2009171:-1:exon

position:2008826:-1
position: 2008826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2007033-2007315:-1:exon

position:2007033:-1
position: 2007033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2007315:-1
position: 2007315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2000370-2000457:-1:exon

position:2000370:-1
position: 2000370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2000457:-1
position: 2000457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1996516-1996687:-1:exon

position:1996516:-1
position: 1996516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1996687:-1
position: 1996687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1994965-1995134:-1:exon

position:1994965:-1
position: 1994965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1995134:-1
position: 1995134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1990816-1991050:-1:exon

position:1991050:-1
position: 1991050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111058816
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111058816
product: cyclin-dependent-like kinase 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_039440474.1
SIO_010081: LOC111058816
subclass of: SO_0000673
so part of: LOC111058816
location: complement(join(1990816..1991050,1994965..1995134,1996516..1996687,1998488..1998575,2007033..2007315,2008826..2009163))
location: region:1990816-2009163:-1
so has part: feature:2008826-2009163:-1:exon
so has part: feature:2007033-2007315:-1:exon
so has part: feature:1998488-1998575:-1:exon
so has part: feature:1996516-1996687:-1:exon
so has part: feature:1994965-1995134:-1:exon
so has part: feature:1990816-1991050:-1:exon

position:2009163:-1
position: 2009163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2008826-2009163:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2007033-2007315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1998488-1998575:-1:exon

position:1998488:-1
position: 1998488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1998575:-1
position: 1998575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1996516-1996687:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1994965-1995134:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1990816-1991050:-1:exon

LOC111058816
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111058816
product: cyclin-dependent-like kinase 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_039440475.1
SIO_010081: LOC111058816
subclass of: SO_0000673
so part of: LOC111058816
location: complement(join(1990816..1991050,1994965..1995134,1996516..1996618,1996887..1996955,1998488..1998575,2007033..2007315,2008826..2009157))
location: region:1990816-2009157:-1
so has part: feature:2008826-2009157:-1:exon
so has part: feature:2007033-2007315:-1:exon
so has part: feature:1998488-1998575:-1:exon
so has part: feature:1996887-1996955:-1:exon
so has part: feature:1996516-1996618:-1:exon
so has part: feature:1994965-1995134:-1:exon
so has part: feature:1990816-1991050:-1:exon

position:2009157:-1
position: 2009157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2008826-2009157:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2007033-2007315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1998488-1998575:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1996887-1996955:-1:exon

position:1996887:-1
position: 1996887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1996955:-1
position: 1996955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1996516-1996618:-1:exon

position:1996618:-1
position: 1996618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1994965-1995134:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1990816-1991050:-1:exon

LOC111058816
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111058816
product: cyclin-dependent-like kinase 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_039440473.1
SIO_010081: LOC111058816
subclass of: SO_0000673
so part of: LOC111058816
location: complement(join(1990816..1991050,1994965..1995134,1996516..1996618,1996887..1996955,2000370..2000457,2007033..2007315,2008826..2009157))
location: region:1990816-2009157:-1
so has part: feature:2008826-2009157:-1:exon
so has part: feature:2007033-2007315:-1:exon
so has part: feature:2000370-2000457:-1:exon
so has part: feature:1996887-1996955:-1:exon
so has part: feature:1996516-1996618:-1:exon
so has part: feature:1994965-1995134:-1:exon
so has part: feature:1990816-1991050:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2008826-2009157:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2007033-2007315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2000370-2000457:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1996887-1996955:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1996516-1996618:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1994965-1995134:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1990816-1991050:-1:exon

LOC111058816
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111058816
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent-like kinase 5 isoform X3
translation: MQKYEKLEKIGEGTYGTVFKAKNRETLEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDPDVVKSFMFQLLRGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWCGLLQLPDYKPFPIYHPSMTFAQVVPKLNSKGRDLVQRLLVCNPCERVGADEAMAHAYFVDVPPAVGGPGGLAPRGAPPRGAD
SIO_010081: LOC111058816
subclass of: SO_0000673
so part of: LOC111058816
location: complement(join(1990868..1991050,1994965..1995134,1996516..1996687,1998488..1998575,2007033..2007315,2008826..2008862))
location: region:1990868-2008862:-1
so has part: feature:2008826-2008862:-1:exon
so has part: feature:2007033-2007315:-1:exon
so has part: feature:1998488-1998575:-1:exon
so has part: feature:1996516-1996687:-1:exon
so has part: feature:1994965-1995134:-1:exon
so has part: feature:1990868-1991050:-1:exon

XP_039296408.1
type: Protein
SIO_000068: ncbiprotein

position:1990868:-1
position: 1990868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2008862:-1
position: 2008862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2008826-2008862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2007033-2007315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1998488-1998575:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1996516-1996687:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1994965-1995134:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1990868-1991050:-1:exon

LOC111058816
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111058816
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent-like kinase 5 isoform X4
translation: MQKYEKLEKIGEGTYGTVFKAKNRETLEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDPDVVKSFMFQLLRGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWCGLLQLPDYKPFPIYHPSMTFAQVVPKLNSKGRDLVQRLLVCNPCERVGADEAMAHAYFVDVPPAVGGPGGLAPRGAPPRGAD
SIO_010081: LOC111058816
subclass of: SO_0000673
so part of: LOC111058816
location: complement(join(1990868..1991050,1994965..1995134,1996516..1996618,1996887..1996955,1998488..1998575,2007033..2007315,2008826..2008862))
location: region:1990868-2008862:-1
so has part: feature:2008826-2008862:-1:exon
so has part: feature:2007033-2007315:-1:exon
so has part: feature:1998488-1998575:-1:exon
so has part: feature:1996887-1996955:-1:exon
so has part: feature:1996516-1996618:-1:exon
so has part: feature:1994965-1995134:-1:exon
so has part: feature:1990868-1991050:-1:exon

XP_039296409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2008826-2008862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2007033-2007315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1998488-1998575:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1996887-1996955:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1996516-1996618:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1994965-1995134:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1990868-1991050:-1:exon

LOC111058816
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111058816
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent-like kinase 5 isoform X1
translation: MQKYEKLEKIGEGTYGTVFKAKNRETLEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDPDVVKSFMFQLLRGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWCGLLQLPDYKPFPIYHPSMTFAQVVPKLNSKGRDLVQRLLVCNPCERVGADEAMAHAYFVDVPPAVGGPGGLAPRGAPPRGAD
SIO_010081: LOC111058816
subclass of: SO_0000673
so part of: LOC111058816
location: complement(join(1990868..1991050,1994965..1995134,1996516..1996687,2000370..2000457,2007033..2007315,2008826..2008862))
location: region:1990868-2008862:-1
so has part: feature:2008826-2008862:-1:exon
so has part: feature:2007033-2007315:-1:exon
so has part: feature:2000370-2000457:-1:exon
so has part: feature:1996516-1996687:-1:exon
so has part: feature:1994965-1995134:-1:exon
so has part: feature:1990868-1991050:-1:exon

XP_039296406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2008826-2008862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2007033-2007315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2000370-2000457:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1996516-1996687:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1994965-1995134:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1990868-1991050:-1:exon

LOC111058816
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111058816
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent-like kinase 5 isoform X2
translation: MQKYEKLEKIGEGTYGTVFKAKNRETLEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDPDVVKSFMFQLLRGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWCGLLQLPDYKPFPIYHPSMTFAQVVPKLNSKGRDLVQRLLVCNPCERVGADEAMAHAYFVDVPPAVGGPGGLAPRGAPPRGAD
SIO_010081: LOC111058816
subclass of: SO_0000673
so part of: LOC111058816
location: complement(join(1990868..1991050,1994965..1995134,1996516..1996618,1996887..1996955,2000370..2000457,2007033..2007315,2008826..2008862))
location: region:1990868-2008862:-1
so has part: feature:2008826-2008862:-1:exon
so has part: feature:2007033-2007315:-1:exon
so has part: feature:2000370-2000457:-1:exon
so has part: feature:1996887-1996955:-1:exon
so has part: feature:1996516-1996618:-1:exon
so has part: feature:1994965-1995134:-1:exon
so has part: feature:1990868-1991050:-1:exon

XP_039296407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2008826-2008862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2007033-2007315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2000370-2000457:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1996887-1996955:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1996516-1996618:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1994965-1995134:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1990868-1991050:-1:exon

LOC120354147
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354147
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2013745..2014599)
location: region:2013745-2014599:-1
so has part: feature:2013745-2014599:-1:exon
subclass of: SO_0000011

120354147
type: Gene
SIO_000068: ncbigene

position:2013745:-1
position: 2013745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2014599:-1
position: 2014599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2013745-2014599:-1:exon

LOC120354147
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC120354147
product: uncharacterized LOC120354147
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XR_005572835.1
SIO_010081: LOC120354147
subclass of: SO_0000673
so part of: LOC120354147
location: complement(join(2013745..2014130,2014223..2014599))
location: region:2013745-2014599:-1
so has part: feature:2014223-2014599:-1:exon
so has part: feature:2013745-2014130:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2014223-2014599:-1:exon

position:2014223:-1
position: 2014223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2013745-2014130:-1:exon

position:2014130:-1
position: 2014130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354146
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354146
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2035847..2044276
location: region:2035847-2044276:1
so has part: feature:2035847-2044276:1:exon
subclass of: SO_0000010

120354146
type: Gene
SIO_000068: ncbigene

position:2035847:1
position: 2035847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2044276:1
position: 2044276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2035847-2044276:1:exon

LOC120354146
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354146
product: transmembrane protein 107-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_039440481.1
SIO_010081: LOC120354146
subclass of: SO_0000673
so part of: LOC120354146
location: join(2035847..2035915,2042013..2042113,2043606..2044276)
location: region:2035847-2044276:1
so has part: feature:2035847-2035915:1:exon
so has part: feature:2042013-2042113:1:exon
so has part: feature:2043606-2044276:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2035847-2035915:1:exon

position:2035915:1
position: 2035915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2042013-2042113:1:exon

position:2042013:1
position: 2042013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2042113:1
position: 2042113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2043606-2044276:1:exon

position:2043606:1
position: 2043606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120354146
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354146
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 107-like
translation: MKNFEILIVLSLAIGLLAIELTGFIFGLSMFMPAASVLSIGCHASAAIALSYALFDSWDSSIYWTVFALFSVPPGLVEVINAVNILVLKRV
SIO_010081: LOC120354146
subclass of: SO_0000673
so part of: LOC120354146
location: join(2035902..2035915,2042013..2042113,2043606..2043766)
location: region:2035902-2043766:1
so has part: feature:2035902-2035915:1:exon
so has part: feature:2042013-2042113:1:exon
so has part: feature:2043606-2043766:1:exon

XP_039296415.1
type: Protein
SIO_000068: ncbiprotein

position:2035902:1
position: 2035902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2043766:1
position: 2043766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2035902-2035915:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2042013-2042113:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2043606-2043766:1:exon

LOC120348919
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120348919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2067804..2092535)
location: region:2067804-2092535:-1
so has part: feature:2067804-2092535:-1:exon
subclass of: SO_0000010

120348919
type: Gene
SIO_000068: ncbigene

position:2067804:-1
position: 2067804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2092535:-1
position: 2092535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2067804-2092535:-1:exon

LOC120348919
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120348919
product: solute carrier family 2, facilitated glucose transporter member 5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
transcript id: XM_039441137.1
SIO_010081: LOC120348919
subclass of: SO_0000673
so part of: LOC120348919
location: complement(join(2067804..2067820,2075687..2075824,2076646..2076786,2080311..2080435,2081939..2082099,2087916..2088026,2091369..2091483,2092519..2092535))
location: region:2067804-2092535:-1
so has part: feature:2092519-2092535:-1:exon
so has part: feature:2091369-2091483:-1:exon
so has part: feature:2087916-2088026:-1:exon
so has part: feature:2081939-2082099:-1:exon
so has part: feature:2080311-2080435:-1:exon
so has part: feature:2076646-2076786:-1:exon
so has part: feature:2075687-2075824:-1:exon
so has part: feature:2067804-2067820:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2092519-2092535:-1:exon

position:2092519:-1
position: 2092519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2091369-2091483:-1:exon

position:2091369:-1
position: 2091369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2091483:-1
position: 2091483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2087916-2088026:-1:exon

position:2087916:-1
position: 2087916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2088026:-1
position: 2088026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2081939-2082099:-1:exon

position:2081939:-1
position: 2081939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2082099:-1
position: 2082099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2080311-2080435:-1:exon

position:2080311:-1
position: 2080311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2080435:-1
position: 2080435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2076646-2076786:-1:exon

position:2076646:-1
position: 2076646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2076786:-1
position: 2076786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2075687-2075824:-1:exon

position:2075687:-1
position: 2075687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2075824:-1
position: 2075824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2067804-2067820:-1:exon

position:2067820:-1
position: 2067820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120348919
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120348919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 2, facilitated glucose transporter member 5-like
translation: MSSSLLVPEVDGKMDQDHHDTGYFAVSSTADLTPMKRAGSSTEKERDGRATWLLVLSGMATTFGASLPVGYNIGVINAPSAVIQKWCSEALLQRYSITLTPATLAIVWSTIVSIFLIGGMIGSLAGSWFAHQIGRKGTLIVSGVLGVVAGILFLTCKDPHLIEFIFIGRFLVGLSSGLITGVMPMYLCEIAPPNLRGVMGVLCPLGLTFGVVFSQFMGMNWILGTEQHWHHLLALYAILIIFCGLALPFMPESPKYLYYIKGLKQRACRGLIET
SIO_010081: LOC120348919
subclass of: SO_0000673
so part of: LOC120348919
location: complement(join(2067804..2067820,2075687..2075824,2076646..2076786,2080311..2080435,2081939..2082099,2087916..2088026,2091369..2091483,2092519..2092535))
location: region:2067804-2092535:-1
so has part: feature:2092519-2092535:-1:exon
so has part: feature:2091369-2091483:-1:exon
so has part: feature:2087916-2088026:-1:exon
so has part: feature:2081939-2082099:-1:exon
so has part: feature:2080311-2080435:-1:exon
so has part: feature:2076646-2076786:-1:exon
so has part: feature:2075687-2075824:-1:exon
so has part: feature:2067804-2067820:-1:exon

XP_039297071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2092519-2092535:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2091369-2091483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2087916-2088026:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2081939-2082099:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2080311-2080435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2076646-2076786:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2075687-2075824:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2067804-2067820:-1:exon

LOC111056816
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111056816
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2143924..2165666)
location: region:2143924-2165666:-1
so has part: feature:2143924-2165666:-1:exon
subclass of: SO_0000010

111056816
type: Gene
SIO_000068: ncbigene

position:2143924:-1
position: 2143924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2165666:-1
position: 2165666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2143924-2165666:-1:exon

LOC111056816
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111056816
product: transmembrane protein 107-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_039440477.1
SIO_010081: LOC111056816
subclass of: SO_0000673
so part of: LOC111056816
location: complement(join(2143924..2144713,2145446..2145546,2152211..2152284,2160987..2161116,2165492..2165666))
location: region:2143924-2165666:-1
so has part: feature:2165492-2165666:-1:exon
so has part: feature:2160987-2161116:-1:exon
so has part: feature:2152211-2152284:-1:exon
so has part: feature:2145446-2145546:-1:exon
so has part: feature:2143924-2144713:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2165492-2165666:-1:exon

position:2165492:-1
position: 2165492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2160987-2161116:-1:exon

position:2160987:-1
position: 2160987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2161116:-1
position: 2161116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2152211-2152284:-1:exon

position:2152211:-1
position: 2152211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2152284:-1
position: 2152284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2145446-2145546:-1:exon

position:2145446:-1
position: 2145446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2145546:-1
position: 2145546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2143924-2144713:-1:exon

position:2144713:-1
position: 2144713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111056816
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111056816
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 107-like
translation: MSMSLLCADALIPSRFLTLIAHLTITIVILTAREEVVTASLPYDYEEDENYQSMKNFEILIVLSLAIGLLAIELTGFIFGLSMFMPAASVLSIGCHASAAIALSYALFDSWDSSIYWTVFALFSVPPGLVEVINAVNILVLKRV
SIO_010081: LOC111056816
subclass of: SO_0000673
so part of: LOC111056816
location: complement(join(2144553..2144713,2145446..2145546,2152211..2152284,2160987..2161085))
location: region:2144553-2161085:-1
so has part: feature:2160987-2161085:-1:exon
so has part: feature:2152211-2152284:-1:exon
so has part: feature:2145446-2145546:-1:exon
so has part: feature:2144553-2144713:-1:exon

XP_039296411.1
type: Protein
SIO_000068: ncbiprotein

position:2144553:-1
position: 2144553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2161085:-1
position: 2161085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2160987-2161085:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2152211-2152284:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2145446-2145546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2144553-2144713:-1:exon

LOC111056815
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111056815
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2172642..2213789
location: region:2172642-2213789:1
so has part: feature:2172642-2213789:1:exon
subclass of: SO_0000010

111056815
type: Gene
SIO_000068: ncbigene

position:2172642:1
position: 2172642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2213789:1
position: 2213789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2172642-2213789:1:exon

LOC111056815
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111056815
product: probable serine hydrolase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, 8 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039441138.1
SIO_010081: LOC111056815
subclass of: SO_0000673
so part of: LOC111056815
location: join(2172642..2172679,2177261..2177338,2178285..2178445,2180194..2180426,2182109..2182301,2184790..2184821,2186428..2186582,2201437..2201492,2204421..2204653,2208159..2208351,2213353..2213789)
location: region:2172642-2213789:1
so has part: feature:2172642-2172679:1:exon
so has part: feature:2177261-2177338:1:exon
so has part: feature:2178285-2178445:1:exon
so has part: feature:2180194-2180426:1:exon
so has part: feature:2182109-2182301:1:exon
so has part: feature:2184790-2184821:1:exon
so has part: feature:2186428-2186582:1:exon
so has part: feature:2201437-2201492:1:exon
so has part: feature:2204421-2204653:1:exon
so has part: feature:2208159-2208351:1:exon
so has part: feature:2213353-2213789:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2172642-2172679:1:exon

position:2172679:1
position: 2172679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2177261-2177338:1:exon

position:2177261:1
position: 2177261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2177338:1
position: 2177338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2178285-2178445:1:exon

position:2178285:1
position: 2178285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2178445:1
position: 2178445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2180194-2180426:1:exon

position:2180194:1
position: 2180194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2180426:1
position: 2180426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2182109-2182301:1:exon

position:2182109:1
position: 2182109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2182301:1
position: 2182301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2184790-2184821:1:exon

position:2184790:1
position: 2184790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2184821:1
position: 2184821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2186428-2186582:1:exon

position:2186428:1
position: 2186428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2186582:1
position: 2186582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2201437-2201492:1:exon

position:2201437:1
position: 2201437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2201492:1
position: 2201492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2204421-2204653:1:exon

position:2204421:1
position: 2204421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2204653:1
position: 2204653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2208159-2208351:1:exon

position:2208159:1
position: 2208159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2208351:1
position: 2208351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2213353-2213789:1:exon

position:2213353:1
position: 2213353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111056815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111056815
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable serine hydrolase
translation: MDLTISDKMADCNLVEPTVKEIEIPVPWGVIKGKWWGPEDRQPYLALHGWQDNCGSFDALASQLAPAISLLCIDLPGHGLSSPYPQGMTYYIFWDTMVLIRRIVNHYKWRKVSLIGHSLGGAAGFLYAGAFPQDVDKLISIDIVCPRIARTEVLMKQVPDCIDKFLKYEGLPESSQPRYEYDEMVQIAMDAHNGSLTKQSCQTMMKRGMQPSRQNSREFMFTRDPRLKPLWQNKDPRLKCRSSNVLEDQVYAYADKISCEYLNIRARPWITFELPEVYGKLLDKIRKTSRKHLLCIDMIGHGRSSHFPKGHLYYFFWDAVVMVRRMVKHFKWEKVSILGHSRGGSIGFMYAAYYPTEVEFLICLDIAYPKLEPIGKMVDDTAKTVDRFLRYETFSEDNMPCYGYTEMIDLVESAYLGSITNESARILMNRGMKPAKTKRGTFNFTRDIRLKTGSTLAMIPEDLSRSMAEKISCAYLNIRADEGFYTPDALYDDILETISKNARHFEKHTVPGKHHVHLNDPSQVAEIISKFLLDREEEKKKKDEEEEEEVDEFEPDNPYF
SIO_010081: LOC111056815
subclass of: SO_0000673
so part of: LOC111056815
location: join(2172661..2172679,2177261..2177338,2178285..2178445,2180194..2180426,2182109..2182301,2184790..2184821,2186428..2186582,2201437..2201492,2204421..2204653,2208159..2208351,2213353..2213682)
location: region:2172661-2213682:1
so has part: feature:2172661-2172679:1:exon
so has part: feature:2177261-2177338:1:exon
so has part: feature:2178285-2178445:1:exon
so has part: feature:2180194-2180426:1:exon
so has part: feature:2182109-2182301:1:exon
so has part: feature:2184790-2184821:1:exon
so has part: feature:2186428-2186582:1:exon
so has part: feature:2201437-2201492:1:exon
so has part: feature:2204421-2204653:1:exon
so has part: feature:2208159-2208351:1:exon
so has part: feature:2213353-2213682:1:exon

XP_039297072.1
type: Protein
SIO_000068: ncbiprotein

position:2172661:1
position: 2172661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2213682:1
position: 2213682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2172661-2172679:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2177261-2177338:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2178285-2178445:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2180194-2180426:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2182109-2182301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2184790-2184821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2186428-2186582:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2201437-2201492:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2204421-2204653:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2208159-2208351:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2213353-2213682:1:exon

LOC120354148
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354148
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2215701..2261398)
location: region:2215701-2261398:-1
so has part: feature:2215701-2261398:-1:exon
subclass of: SO_0000011

120354148
type: Gene
SIO_000068: ncbigene

position:2215701:-1
position: 2215701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2261398:-1
position: 2261398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2215701-2261398:-1:exon

LOC120354148
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC120354148
product: uncharacterized LOC120354148
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XR_005572836.1
SIO_010081: LOC120354148
subclass of: SO_0000673
so part of: LOC120354148
location: complement(join(2215701..2216211,2225673..2225857,2261219..2261398))
location: region:2215701-2261398:-1
so has part: feature:2261219-2261398:-1:exon
so has part: feature:2225673-2225857:-1:exon
so has part: feature:2215701-2216211:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2261219-2261398:-1:exon

position:2261219:-1
position: 2261219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2225673-2225857:-1:exon

position:2225673:-1
position: 2225673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2225857:-1
position: 2225857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2215701-2216211:-1:exon

position:2216211:-1
position: 2216211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354145
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354145
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<2276619..2283743)
location: region:2276619-2283743:-1
so has part: feature:2276619-2283743:-1:exon
subclass of: SO_0000010

120354145
type: Gene
SIO_000068: ncbigene

position:2276619:-1
position: 2276619
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:2283743:-1
position: 2283743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2276619-2283743:-1:exon

LOC120354145
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354145
product: probable serine hydrolase
inference: similar to RNA sequence (same species):INSD:GGNH01035775.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 88 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_039440479.1
SIO_010081: LOC120354145
subclass of: SO_0000673
so part of: LOC120354145
location: complement(join(<2276619..2276779,2283538..2283743))
location: region:2276619-2283743:-1
so has part: feature:2283538-2283743:-1:exon
so has part: feature:2276619-2276779:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2283538-2283743:-1:exon

position:2283538:-1
position: 2283538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2276619-2276779:-1:exon

position:2276779:-1
position: 2276779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354145
inference: similar to RNA sequence (same species):INSD:GGNH01035775.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 88 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable serine hydrolase
translation: MERSYEDIDIPVPWGHISGKWWGPRDQQPILVLHGWQDNAASFDKLAPLLPHHISLLCIDMIGHGRSSHFPKGHLYYFFWDAVVMVRRIVKHFKWERVSIL
SIO_010081: LOC120354145
subclass of: SO_0000673
so part of: LOC120354145
location: complement(join(<2276619..2276779,2283538..2283592))
location: region:2276619-2283592:-1
so has part: feature:2283538-2283592:-1:exon
so has part: feature:2276619-2276779:-1:exon

XP_039296413.1
type: Protein
SIO_000068: ncbiprotein

position:2283592:-1
position: 2283592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2283538-2283592:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2276619-2276779:-1:exon

LOC120354144
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354144
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2303272..2306240)
location: region:2303272-2306240:-1
so has part: feature:2303272-2306240:-1:exon
subclass of: SO_0000010

120354144
type: Gene
SIO_000068: ncbigene

position:2303272:-1
position: 2303272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2306240:-1
position: 2306240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2303272-2306240:-1:exon

LOC120354144
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354144
product: probable serine hydrolase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_039440478.1
SIO_010081: LOC120354144
subclass of: SO_0000673
so part of: LOC120354144
location: complement(join(2303272..2303849,2306046..2306240))
location: region:2303272-2306240:-1
so has part: feature:2306046-2306240:-1:exon
so has part: feature:2303272-2303849:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2306046-2306240:-1:exon

position:2306046:-1
position: 2306046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2303272-2303849:-1:exon

position:2303849:-1
position: 2303849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354144
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354144
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable serine hydrolase
translation: MVQIAMDAHNGSLTKQSCQTMMKRGMQPSRQNSREFMFTRDPRLKVAGLAMFSKDQVYAYADKISCEYLNIRARPGITFELPEVYGELLDKIRKTSRRFEYHELNGTHHLHMNEGSREEVAKVIREFIQGKKVTVLLRMV
SIO_010081: LOC120354144
subclass of: SO_0000673
so part of: LOC120354144
location: complement(join(2303562..2303849,2306046..2306180))
location: region:2303562-2306180:-1
so has part: feature:2306046-2306180:-1:exon
so has part: feature:2303562-2303849:-1:exon

XP_039296412.1
type: Protein
SIO_000068: ncbiprotein

position:2303562:-1
position: 2303562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2306180:-1
position: 2306180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2306046-2306180:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2303562-2303849:-1:exon

LOC120354143
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354143
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2307466..>2307696)
location: region:2307466-2307696:-1
so has part: feature:2307466-2307696:-1:exon
subclass of: SO_0000010

120354143
type: Gene
SIO_000068: ncbigene

position:2307466:-1
position: 2307466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2307696:-1
position: 2307696
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2307466-2307696:-1:exon

LOC120354143
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354143
product: probable serine hydrolase
inference: similar to RNA sequence (same species):INSD:GAYF02022016.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 370 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039440476.1
SIO_010081: LOC120354143
subclass of: SO_0000673
so part of: LOC120354143
location: complement(2307466..>2307696)
location: region:2307466-2307696:-1
so has part: feature:2307466-2307696:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2307466-2307696:-1:exon

LOC120354143
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354143
inference: similar to RNA sequence (same species):INSD:GAYF02022016.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 234 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable serine hydrolase
translation: MADCNLVEPTVKEIEIPVPWGVIKGKWWGPEDRQPYLALHGWQDNCGSFDALASQLAPAISLLCIDLPGHGLSSPYPQGMTYYIFWDTMVLIRRIVNHYKWRKVSLIGHSLGGAAGFLYAGAFPQDVDKLISIDIVCPRIARTEVLMKQVPRLY
SIO_010081: LOC120354143
subclass of: SO_0000673
so part of: LOC120354143
location: complement(2307466..>2307696)
location: region:2307466-2307696:-1
so has part: feature:2307466-2307696:-1:exon

XP_039296410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2307466-2307696:-1:exon

LOC120354257
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354257
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2353606..2360760)
location: region:2353606-2360760:-1
so has part: feature:2353606-2360760:-1:exon
subclass of: SO_0000010

120354257
type: Gene
SIO_000068: ncbigene

position:2353606:-1
position: 2353606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2360760:-1
position: 2360760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2353606-2360760:-1:exon

LOC120354257
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354257
product: sugar transporter SWEET1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039441139.1
SIO_010081: LOC120354257
subclass of: SO_0000673
so part of: LOC120354257
location: complement(join(2353606..2353668,2354155..2354278,2355173..2355250,2360105..2360760))
location: region:2353606-2360760:-1
so has part: feature:2360105-2360760:-1:exon
so has part: feature:2355173-2355250:-1:exon
so has part: feature:2354155-2354278:-1:exon
so has part: feature:2353606-2353668:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2360105-2360760:-1:exon

position:2360105:-1
position: 2360105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2355173-2355250:-1:exon

position:2355173:-1
position: 2355173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2355250:-1
position: 2355250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2354155-2354278:-1:exon

position:2354155:-1
position: 2354155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2354278:-1
position: 2354278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2353606-2353668:-1:exon

position:2353668:-1
position: 2353668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354257
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354257
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sugar transporter SWEET1-like
translation: MALEDYKDLVATVASVTTIAQFFSPIFICKEIIQKGNTKDIDAMPFIGGMVMSLLMLQHGMILNDPAMIPVNVAGFTLNFTYFAIYYLYSHERAVHRAVTVSRLHRPKKLFTL
SIO_010081: LOC120354257
subclass of: SO_0000673
so part of: LOC120354257
location: complement(join(2353606..2353668,2354155..2354278,2355173..2355250,2360105..2360181))
location: region:2353606-2360181:-1
so has part: feature:2360105-2360181:-1:exon
so has part: feature:2355173-2355250:-1:exon
so has part: feature:2354155-2354278:-1:exon
so has part: feature:2353606-2353668:-1:exon

XP_039297073.1
type: Protein
SIO_000068: ncbiprotein

position:2360181:-1
position: 2360181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2360105-2360181:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2355173-2355250:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2354155-2354278:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2353606-2353668:-1:exon

LOC111058818
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111058818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2381714..2401279
location: region:2381714-2401279:1
so has part: feature:2381714-2401279:1:exon
subclass of: SO_0000010

111058818
type: Gene
SIO_000068: ncbigene

position:2381714:1
position: 2381714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2401279:1
position: 2401279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2381714-2401279:1:exon

LOC111058818
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111058818
product: solute carrier family 2, facilitated glucose transporter member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 4 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039441140.1
SIO_010081: LOC111058818
subclass of: SO_0000673
so part of: LOC111058818
location: join(2381714..2381730,2383158..2383282,2384452..2384554,2385422..2385471,2388373..2388560,2392422..2392634,2396400..2396502,2398963..2399131,2401039..2401279)
location: region:2381714-2401279:1
so has part: feature:2381714-2381730:1:exon
so has part: feature:2383158-2383282:1:exon
so has part: feature:2384452-2384554:1:exon
so has part: feature:2385422-2385471:1:exon
so has part: feature:2388373-2388560:1:exon
so has part: feature:2392422-2392634:1:exon
so has part: feature:2396400-2396502:1:exon
so has part: feature:2398963-2399131:1:exon
so has part: feature:2401039-2401279:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2381714-2381730:1:exon

position:2381730:1
position: 2381730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2383158-2383282:1:exon

position:2383158:1
position: 2383158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2383282:1
position: 2383282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2384452-2384554:1:exon

position:2384452:1
position: 2384452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2384554:1
position: 2384554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2385422-2385471:1:exon

position:2385422:1
position: 2385422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2385471:1
position: 2385471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2388373-2388560:1:exon

position:2388373:1
position: 2388373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2388560:1
position: 2388560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2392422-2392634:1:exon

position:2392422:1
position: 2392422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2392634:1
position: 2392634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2396400-2396502:1:exon

position:2396400:1
position: 2396400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2396502:1
position: 2396502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2398963-2399131:1:exon

position:2398963:1
position: 2398963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2399131:1
position: 2399131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2401039-2401279:1:exon

position:2401039:1
position: 2401039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111058818
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111058818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 2, facilitated glucose transporter member 3
translation: MHHRIVKGTLIVSGVLGVVAGILFLTCKDPHLIEFIFIGRFLVGLSSGLITGVMPMYLCEIAPPNLRGVMGVLPTRTNIWRLSPKYLYHQGLKQRACRDMSRLRGEPLDSVSRELESQGALNEITSEGWTIARLLATRNLRLPLALTCALQAGQQTSGINAVFYYSMKIFESAGLNVAEQQYASLGAGLVNFGVAVIMLPLVNKLPHRKLTISSSCLATLTLFLLTISISYIKTYYWMPYLCVFSVMFYVLVYGIGLGPIPYFIGSELFEVGPRPSAMALGSVANWTGNFSVGMLFPSLQRVMGPYSFLIFAFCTSLLTIFLHMFLPETNPRHMYEREESHESTNTCQQSTTDRMLFKSIHDL
SIO_010081: LOC111058818
subclass of: SO_0000673
so part of: LOC111058818
location: join(2381714..2381730,2383158..2383282,2384452..2384554,2385422..2385471,2388373..2388560,2392422..2392634,2396400..2396502,2398963..2399131,2401039..2401162)
location: region:2381714-2401162:1
so has part: feature:2381714-2381730:1:exon
so has part: feature:2383158-2383282:1:exon
so has part: feature:2384452-2384554:1:exon
so has part: feature:2385422-2385471:1:exon
so has part: feature:2388373-2388560:1:exon
so has part: feature:2392422-2392634:1:exon
so has part: feature:2396400-2396502:1:exon
so has part: feature:2398963-2399131:1:exon
so has part: feature:2401039-2401162:1:exon

XP_039297074.1
type: Protein
SIO_000068: ncbiprotein

position:2401162:1
position: 2401162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2381714-2381730:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2383158-2383282:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2384452-2384554:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2385422-2385471:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2388373-2388560:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2392422-2392634:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2396400-2396502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2398963-2399131:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2401039-2401162:1:exon

LOC120354153
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2414722..2415252)
location: region:2414722-2415252:-1
so has part: feature:2414722-2415252:-1:exon
subclass of: SO_0000011

120354153
type: Gene
SIO_000068: ncbigene

position:2414722:-1
position: 2414722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2415252:-1
position: 2415252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2414722-2415252:-1:exon

LOC120354153
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC120354153
product: uncharacterized LOC120354153
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XR_005572841.1
SIO_010081: LOC120354153
subclass of: SO_0000673
so part of: LOC120354153
location: complement(join(2414722..2414789,2415180..2415252))
location: region:2414722-2415252:-1
so has part: feature:2415180-2415252:-1:exon
so has part: feature:2414722-2414789:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2415180-2415252:-1:exon

position:2415180:-1
position: 2415180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2414722-2414789:-1:exon

position:2414789:-1
position: 2414789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354150
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354150
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2422299..2474891)
location: region:2422299-2474891:-1
so has part: feature:2422299-2474891:-1:exon
subclass of: SO_0000010

120354150
type: Gene
SIO_000068: ncbigene

position:2422299:-1
position: 2422299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2474891:-1
position: 2474891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2422299-2474891:-1:exon

LOC120354150
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354150
product: uncharacterized LOC120354150
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_039440484.1
SIO_010081: LOC120354150
subclass of: SO_0000673
so part of: LOC120354150
location: complement(join(2422299..2422685,2474317..2474891))
location: region:2422299-2474891:-1
so has part: feature:2474317-2474891:-1:exon
so has part: feature:2422299-2422685:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2474317-2474891:-1:exon

position:2474317:-1
position: 2474317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2422299-2422685:-1:exon

position:2422685:-1
position: 2422685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354150
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120354150
translation: MCYFAFFQSVMAYGITLWGSSTHVRRVLLLQKRALRILCNAEHLAHCRPLFIQEGLLTVYGLYIFRSAVNAFGDLEVQPVRGDSHEYDTRNRLRLDLPYCRLGRTQSSVVYLPGKIINKLPISVRSLPVAALKRRLKHFLQENPFYSLNEFFECDSALVSYKGIPQCPYFAYQG
SIO_010081: LOC120354150
subclass of: SO_0000673
so part of: LOC120354150
location: complement(join(2422635..2422685,2474317..2474790))
location: region:2422635-2474790:-1
so has part: feature:2474317-2474790:-1:exon
so has part: feature:2422635-2422685:-1:exon

XP_039296418.1
type: Protein
SIO_000068: ncbiprotein

position:2422635:-1
position: 2422635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2474790:-1
position: 2474790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2474317-2474790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2422635-2422685:-1:exon

LOC111062275
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111062275
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2423234..2441031
location: region:2423234-2441031:1
so has part: feature:2423234-2441031:1:exon
subclass of: SO_0000010

111062275
type: Gene
SIO_000068: ncbigene

position:2423234:1
position: 2423234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2441031:1
position: 2441031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2423234-2441031:1:exon

LOC111062275
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111062275
product: cyclin-dependent-like kinase 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_039440483.1
SIO_010081: LOC111062275
subclass of: SO_0000673
so part of: LOC111062275
location: join(2423234..2423571,2425128..2425410,2429866..2429953,2433821..2433889,2434158..2434260,2436036..2436205,2438368..2438605,2439987..2441031)
location: region:2423234-2441031:1
so has part: feature:2423234-2423571:1:exon
so has part: feature:2425128-2425410:1:exon
so has part: feature:2429866-2429953:1:exon
so has part: feature:2433821-2433889:1:exon
so has part: feature:2434158-2434260:1:exon
so has part: feature:2436036-2436205:1:exon
so has part: feature:2438368-2438605:1:exon
so has part: feature:2439987-2441031:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2423234-2423571:1:exon

position:2423571:1
position: 2423571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2425128-2425410:1:exon

position:2425128:1
position: 2425128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2425410:1
position: 2425410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2429866-2429953:1:exon

position:2429866:1
position: 2429866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2429953:1
position: 2429953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2433821-2433889:1:exon

position:2433821:1
position: 2433821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2433889:1
position: 2433889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2434158-2434260:1:exon

position:2434158:1
position: 2434158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2434260:1
position: 2434260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2436036-2436205:1:exon

position:2436036:1
position: 2436036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2436205:1
position: 2436205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2438368-2438605:1:exon

position:2438368:1
position: 2438368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2438605:1
position: 2438605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2439987-2441031:1:exon

position:2439987:1
position: 2439987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111062275
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111062275
product: cyclin-dependent-like kinase 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 long SRA reads, 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_039440482.1
SIO_010081: LOC111062275
subclass of: SO_0000673
so part of: LOC111062275
location: join(2423234..2423571,2425128..2425410,2429866..2429953,2434089..2434260,2436036..2436205,2438368..2438605,2439987..2441031)
location: region:2423234-2441031:1
so has part: feature:2423234-2423571:1:exon
so has part: feature:2425128-2425410:1:exon
so has part: feature:2429866-2429953:1:exon
so has part: feature:2434089-2434260:1:exon
so has part: feature:2436036-2436205:1:exon
so has part: feature:2438368-2438605:1:exon
so has part: feature:2439987-2441031:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2423234-2423571:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2425128-2425410:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2429866-2429953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2434089-2434260:1:exon

position:2434089:1
position: 2434089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2436036-2436205:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2438368-2438605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2439987-2441031:1:exon

LOC111062275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111062275
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent-like kinase 5 isoform X2
translation: MQKYEKLEKIGEGTYGTVFKAKNRETLEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDPDVVKSFMFQLLRGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWCGLLQLPDYKPFPIYHPSMTFAQVVPKLNSKGRDLVQRLLVCNPCERVGADEAMAHAYFVDVPPAVGGPGGLAPRGAPPRGAD
SIO_010081: LOC111062275
subclass of: SO_0000673
so part of: LOC111062275
location: join(2423535..2423571,2425128..2425410,2429866..2429953,2433821..2433889,2434158..2434260,2436036..2436205,2438368..2438550)
location: region:2423535-2438550:1
so has part: feature:2423535-2423571:1:exon
so has part: feature:2425128-2425410:1:exon
so has part: feature:2429866-2429953:1:exon
so has part: feature:2433821-2433889:1:exon
so has part: feature:2434158-2434260:1:exon
so has part: feature:2436036-2436205:1:exon
so has part: feature:2438368-2438550:1:exon

XP_039296417.1
type: Protein
SIO_000068: ncbiprotein

position:2423535:1
position: 2423535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2438550:1
position: 2438550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2423535-2423571:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2425128-2425410:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2429866-2429953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2433821-2433889:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2434158-2434260:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2436036-2436205:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2438368-2438550:1:exon

LOC111062275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111062275
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent-like kinase 5 isoform X1
translation: MQKYEKLEKIGEGTYGTVFKAKNRETLEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDPDVVKSFMFQLLRGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWCGLLQLPDYKPFPIYHPSMTFAQVVPKLNSKGRDLVQRLLVCNPCERVGADEAMAHAYFVDVPPAVGGPGGLAPRGAPPRGAD
SIO_010081: LOC111062275
subclass of: SO_0000673
so part of: LOC111062275
location: join(2423535..2423571,2425128..2425410,2429866..2429953,2434089..2434260,2436036..2436205,2438368..2438550)
location: region:2423535-2438550:1
so has part: feature:2423535-2423571:1:exon
so has part: feature:2425128-2425410:1:exon
so has part: feature:2429866-2429953:1:exon
so has part: feature:2434089-2434260:1:exon
so has part: feature:2436036-2436205:1:exon
so has part: feature:2438368-2438550:1:exon

XP_039296416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2423535-2423571:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2425128-2425410:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2429866-2429953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2434089-2434260:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2436036-2436205:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2438368-2438550:1:exon

LOC120354152
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354152
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2449764..2452238)
location: region:2449764-2452238:-1
so has part: feature:2449764-2452238:-1:exon
subclass of: SO_0000011

120354152
type: Gene
SIO_000068: ncbigene

position:2449764:-1
position: 2449764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2452238:-1
position: 2452238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2449764-2452238:-1:exon

LOC120354152
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC120354152
product: uncharacterized LOC120354152
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 long SRA reads, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XR_005572840.1
SIO_010081: LOC120354152
subclass of: SO_0000673
so part of: LOC120354152
location: complement(join(2449764..2451902,2452060..2452238))
location: region:2449764-2452238:-1
so has part: feature:2452060-2452238:-1:exon
so has part: feature:2449764-2451902:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2452060-2452238:-1:exon

position:2452060:-1
position: 2452060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2449764-2451902:-1:exon

position:2451902:-1
position: 2451902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354151
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354151
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2455176..2470544)
location: region:2455176-2470544:-1
so has part: feature:2455176-2470544:-1:exon
subclass of: SO_0000010

120354151
type: Gene
SIO_000068: ncbigene

position:2455176:-1
position: 2455176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2470544:-1
position: 2470544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2455176-2470544:-1:exon

LOC120354151
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354151
product: sugar transporter SWEET1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039440485.1
SIO_010081: LOC120354151
subclass of: SO_0000673
so part of: LOC120354151
location: complement(join(2455176..2455429,2458094..2458213,2459964..2460119,2461698..2461821,2462976..2463053,2469906..2470544))
location: region:2455176-2470544:-1
so has part: feature:2469906-2470544:-1:exon
so has part: feature:2462976-2463053:-1:exon
so has part: feature:2461698-2461821:-1:exon
so has part: feature:2459964-2460119:-1:exon
so has part: feature:2458094-2458213:-1:exon
so has part: feature:2455176-2455429:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2469906-2470544:-1:exon

position:2469906:-1
position: 2469906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2462976-2463053:-1:exon

position:2462976:-1
position: 2462976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2463053:-1
position: 2463053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2461698-2461821:-1:exon

position:2461698:-1
position: 2461698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2461821:-1
position: 2461821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2459964-2460119:-1:exon

position:2459964:-1
position: 2459964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2460119:-1
position: 2460119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2458094-2458213:-1:exon

position:2458094:-1
position: 2458094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2458213:-1
position: 2458213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2455176-2455429:-1:exon

position:2455429:-1
position: 2455429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354151
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354151
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sugar transporter SWEET1-like
translation: MALEDYKDLVATVASVTTIAQFFSPVFICKEIIQKGNTKDIDAMPFILLLLLSLLMLQHGMILNDPAMIPVNVAGFTLNFTYFAIYYLYSHERDSLHGKLAKGVALTAILINYAQLENEKNVEFRFGIIVTVLMLTLIGAPLLQLGDIIKRRSTKGLPFPLIFSGTVVTFLWLLYGIIIKNVFIQFQNVVGFILCAIQLSLFAIFPNSSEDEDKKDKKN
SIO_010081: LOC120354151
subclass of: SO_0000673
so part of: LOC120354151
location: complement(join(2455325..2455429,2458094..2458213,2459964..2460119,2461698..2461821,2462976..2463053,2469906..2469982))
location: region:2455325-2469982:-1
so has part: feature:2469906-2469982:-1:exon
so has part: feature:2462976-2463053:-1:exon
so has part: feature:2461698-2461821:-1:exon
so has part: feature:2459964-2460119:-1:exon
so has part: feature:2458094-2458213:-1:exon
so has part: feature:2455325-2455429:-1:exon

XP_039296419.1
type: Protein
SIO_000068: ncbiprotein

position:2455325:-1
position: 2455325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2469982:-1
position: 2469982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2469906-2469982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2462976-2463053:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2461698-2461821:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2459964-2460119:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2458094-2458213:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2455325-2455429:-1:exon

LOC120354155
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354155
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2496199..2534905)
location: region:2496199-2534905:-1
so has part: feature:2496199-2534905:-1:exon
subclass of: SO_0000011

120354155
type: Gene
SIO_000068: ncbigene

position:2496199:-1
position: 2496199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2534905:-1
position: 2534905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2496199-2534905:-1:exon

LOC120354155
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC120354155
product: uncharacterized LOC120354155, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005572850.1
SIO_010081: LOC120354155
subclass of: SO_0000673
so part of: LOC120354155
location: complement(join(2496199..2497960,2498092..2499051,2501467..2501672,2503272..2503414,2505467..2505568,2530885..2531059,2532393..2532483,2534584..2534905))
location: region:2496199-2534905:-1
so has part: feature:2534584-2534905:-1:exon
so has part: feature:2532393-2532483:-1:exon
so has part: feature:2530885-2531059:-1:exon
so has part: feature:2505467-2505568:-1:exon
so has part: feature:2503272-2503414:-1:exon
so has part: feature:2501467-2501672:-1:exon
so has part: feature:2498092-2499051:-1:exon
so has part: feature:2496199-2497960:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2534584-2534905:-1:exon

position:2534584:-1
position: 2534584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2532393-2532483:-1:exon

position:2532393:-1
position: 2532393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2532483:-1
position: 2532483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2530885-2531059:-1:exon

position:2530885:-1
position: 2530885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2531059:-1
position: 2531059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2505467-2505568:-1:exon

position:2505467:-1
position: 2505467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2505568:-1
position: 2505568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2503272-2503414:-1:exon

position:2503272:-1
position: 2503272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2503414:-1
position: 2503414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2501467-2501672:-1:exon

position:2501467:-1
position: 2501467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2501672:-1
position: 2501672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2498092-2499051:-1:exon

position:2498092:-1
position: 2498092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2499051:-1
position: 2499051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2496199-2497960:-1:exon

position:2497960:-1
position: 2497960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354155
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC120354155
product: uncharacterized LOC120354155, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005572847.1
SIO_010081: LOC120354155
subclass of: SO_0000673
so part of: LOC120354155
location: complement(join(2496199..2497960,2498092..2499051,2501467..2501672,2503272..2503414,2514444..2514545,2530885..2531059,2532393..2532483,2534584..2534897))
location: region:2496199-2534897:-1
so has part: feature:2534584-2534897:-1:exon
so has part: feature:2532393-2532483:-1:exon
so has part: feature:2530885-2531059:-1:exon
so has part: feature:2514444-2514545:-1:exon
so has part: feature:2503272-2503414:-1:exon
so has part: feature:2501467-2501672:-1:exon
so has part: feature:2498092-2499051:-1:exon
so has part: feature:2496199-2497960:-1:exon

position:2534897:-1
position: 2534897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2534584-2534897:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2532393-2532483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2530885-2531059:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2514444-2514545:-1:exon

position:2514444:-1
position: 2514444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2514545:-1
position: 2514545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2503272-2503414:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2501467-2501672:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2498092-2499051:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2496199-2497960:-1:exon

LOC120354155
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC120354155
product: uncharacterized LOC120354155, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XR_005572849.1
SIO_010081: LOC120354155
subclass of: SO_0000673
so part of: LOC120354155
location: complement(join(2496200..2497960,2498092..2499051,2501467..2501672,2503272..2503414,2514444..2514545,2524038..2524419))
location: region:2496200-2524419:-1
so has part: feature:2524038-2524419:-1:exon
so has part: feature:2514444-2514545:-1:exon
so has part: feature:2503272-2503414:-1:exon
so has part: feature:2501467-2501672:-1:exon
so has part: feature:2498092-2499051:-1:exon
so has part: feature:2496200-2497960:-1:exon

position:2496200:-1
position: 2496200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2524419:-1
position: 2524419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2524038-2524419:-1:exon

position:2524038:-1
position: 2524038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2514444-2514545:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2503272-2503414:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2501467-2501672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2498092-2499051:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2496200-2497960:-1:exon

LOC111059882
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111059882
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2544582..2576462
location: region:2544582-2576462:1
so has part: feature:2544582-2576462:1:exon
subclass of: SO_0000010

111059882
type: Gene
SIO_000068: ncbigene

position:2544582:1
position: 2544582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2576462:1
position: 2576462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2544582-2576462:1:exon

LOC111059882
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111059882
product: acetyl-coenzyme A transporter 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 11 long SRA reads, 12 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_039440487.1
SIO_010081: LOC111059882
subclass of: SO_0000673
so part of: LOC111059882
location: join(2544582..2545152,2554414..2554703,2557626..2557903,2559979..2560133,2564264..2564466,2566357..2566541,2569359..2569471,2572269..2572484,2575996..2576462)
location: region:2544582-2576462:1
so has part: feature:2544582-2545152:1:exon
so has part: feature:2554414-2554703:1:exon
so has part: feature:2557626-2557903:1:exon
so has part: feature:2559979-2560133:1:exon
so has part: feature:2564264-2564466:1:exon
so has part: feature:2566357-2566541:1:exon
so has part: feature:2569359-2569471:1:exon
so has part: feature:2572269-2572484:1:exon
so has part: feature:2575996-2576462:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2544582-2545152:1:exon

position:2545152:1
position: 2545152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2554414-2554703:1:exon

position:2554414:1
position: 2554414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2554703:1
position: 2554703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2557626-2557903:1:exon

position:2557626:1
position: 2557626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2557903:1
position: 2557903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2559979-2560133:1:exon

position:2559979:1
position: 2559979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2560133:1
position: 2560133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2564264-2564466:1:exon

position:2564264:1
position: 2564264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2564466:1
position: 2564466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2566357-2566541:1:exon

position:2566357:1
position: 2566357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2566541:1
position: 2566541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2569359-2569471:1:exon

position:2569359:1
position: 2569359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2569471:1
position: 2569471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2572269-2572484:1:exon

position:2572269:1
position: 2572269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2572484:1
position: 2572484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2575996-2576462:1:exon

position:2575996:1
position: 2575996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111059882
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111059882
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: acetyl-coenzyme A transporter 1
translation: METDGAFRKRPKPGVSGEGSDLAEDQVPLVDIVDGAATQSTGDRASSRSTVPSLDGDRLNLAILFGLYLLQGIPLGLTAAVPMLLLNKGSTYKQQAEFSLVYWPFSLKLLWAPLVDGLYWARFGRRKTWLVPIQYLLGVFMMLLSHSVDEWISQLYINRLTALFFALNFLAATQDIAVDGWALTMLKRCNVGYASTCNTVGQTAGYFFGYVLFIAFESAEFCNSYIRSTPQPQGIITFSGFLYFWGWTFMVSTTLIAIFKKEAMTPSNGSSPNDRQLTVKQTYVQLWHLLLTKPAIRLFAFILLTAKICFGTNDSVSGLKLIEYGIPKEKLAMLAVPLIPVQIVLPLLISKYTNGPRPMDVYLRAYPYRLMMNITTGIFVWYTPGANKMXIPVHYYLLLVLMYSLHQIASYSMFVASMAFFASVSDPVLGGTYMTLLNTLSNLGTSWPSTLALLVVDWLTTKTCSTQPENSCWVKEEQEACKSAAGGACVVTWDGYYVALAASTLVGAVWYWWAHRRIRRLQSMDSAMWHHCDNTSSANTKHSR
SIO_010081: LOC111059882
subclass of: SO_0000673
so part of: LOC111059882
location: join(2554419..2554703,2557626..2557903,2559979..2560133,2564264..2564466,2566357..2566541,2569359..2569471,2572269..2572484,2575996..2576193)
location: region:2554419-2576193:1
so has part: feature:2554419-2554703:1:exon
so has part: feature:2557626-2557903:1:exon
so has part: feature:2559979-2560133:1:exon
so has part: feature:2564264-2564466:1:exon
so has part: feature:2566357-2566541:1:exon
so has part: feature:2569359-2569471:1:exon
so has part: feature:2572269-2572484:1:exon
so has part: feature:2575996-2576193:1:exon

XP_039296421.1
type: Protein
SIO_000068: ncbiprotein

position:2554419:1
position: 2554419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2576193:1
position: 2576193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2554419-2554703:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2557626-2557903:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2559979-2560133:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2564264-2564466:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2566357-2566541:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2569359-2569471:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2572269-2572484:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2575996-2576193:1:exon

LOC120354258
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354258
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2581507..2585720
location: region:2581507-2585720:1
so has part: feature:2581507-2585720:1:exon
subclass of: SO_0000010

120354258
type: Gene
SIO_000068: ncbigene

position:2581507:1
position: 2581507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2585720:1
position: 2585720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2581507-2585720:1:exon

LOC120354258
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354258
product: maintenance of mitochondrial morphology protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 long SRA reads, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_039441141.1
SIO_010081: LOC120354258
subclass of: SO_0000673
so part of: LOC120354258
location: join(2581507..2581738,2582275..2583456,2585506..2585720)
location: region:2581507-2585720:1
so has part: feature:2581507-2581738:1:exon
so has part: feature:2582275-2583456:1:exon
so has part: feature:2585506-2585720:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2581507-2581738:1:exon

position:2581738:1
position: 2581738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2582275-2583456:1:exon

position:2582275:1
position: 2582275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2583456:1
position: 2583456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2585506-2585720:1:exon

position:2585506:1
position: 2585506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120354258
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354258
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: maintenance of mitochondrial morphology protein 1-like
translation: MENPAIFNGETPHQPVKLNSETSTTGQQLCGKRPSTPRQQPSCPTSSAHQPPSCLINLAHQPTSSLTSSASNPSGSTNQPATCPTNSAYQPPSYPSGSTHQPSSSAHQPPSCPSSSAHSQQPLSCKTPVTTGALIFGGDRKWLQQITKRSHQLANSEYKGGLKSNEIEFNFMVESKLNRWMARLRSGNLKEEQKEEEEEEEEEEEDDEVESGGDSEKNSGEGGVSGRREGVGGGRGEGQGGRGSEEESERGGGGGRVWEGMRGKQIDEEEEEEEELGEEEEGEGEGSNEGLVNGRNRSGKGGGGGGGGGSQQKLAEEIGRRGGISVIGGERGSVRGGDGKEVVLRAGGGGREEEEEEGRSGKRQRLDKIEELDENDETGQKGKYDENFGKKEQYLQTEVHLIQMDLERNLTRKPAILHLNENNRDINMLKYLCERDKELKRAKRCVLCTLSDSDETINGVEMDGESCNHVKPE
SIO_010081: LOC120354258
subclass of: SO_0000673
so part of: LOC120354258
location: join(2581714..2581738,2582275..2583456,2585506..2585720)
location: region:2581714-2585720:1
so has part: feature:2581714-2581738:1:exon
so has part: feature:2582275-2583456:1:exon
so has part: feature:2585506-2585720:1:exon

XP_039297075.1
type: Protein
SIO_000068: ncbiprotein

position:2581714:1
position: 2581714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2581714-2581738:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582275-2583456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2585506-2585720:1:exon

LOC111059883
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111059883
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2586205..2597720
location: region:2586205-2597720:1
so has part: feature:2586205-2597720:1:exon
subclass of: SO_0000010

111059883
type: Gene
SIO_000068: ncbigene

position:2586205:1
position: 2586205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2597720:1
position: 2597720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2586205-2597720:1:exon

LOC111059883
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111059883
product: GATA zinc finger domain-containing protein 14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039440486.1
SIO_010081: LOC111059883
subclass of: SO_0000673
so part of: LOC111059883
location: join(2586205..2586573,2588171..2588504,2588535..2589574,2589827..2590371,2592671..2592930,2594397..2594643,2597361..2597720)
location: region:2586205-2597720:1
so has part: feature:2586205-2586573:1:exon
so has part: feature:2588171-2588504:1:exon
so has part: feature:2588535-2589574:1:exon
so has part: feature:2589827-2590371:1:exon
so has part: feature:2592671-2592930:1:exon
so has part: feature:2594397-2594643:1:exon
so has part: feature:2597361-2597720:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2586205-2586573:1:exon

position:2586573:1
position: 2586573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2588171-2588504:1:exon

position:2588171:1
position: 2588171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2588504:1
position: 2588504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2588535-2589574:1:exon

position:2588535:1
position: 2588535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2589574:1
position: 2589574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2589827-2590371:1:exon

position:2589827:1
position: 2589827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2590371:1
position: 2590371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2592671-2592930:1:exon

position:2592671:1
position: 2592671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2592930:1
position: 2592930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2594397-2594643:1:exon

position:2594397:1
position: 2594397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2594643:1
position: 2594643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2597361-2597720:1:exon

position:2597361:1
position: 2597361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111059883
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111059883
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GATA zinc finger domain-containing protein 14
translation: MGVDIKSDDWNEASTTKTQRNIDKINKMKDIDQQKLGDSQNSTQTSKNKHEQFFEDFSSGDCLKENSKFPPKNSGVHKVQNCDRGDEIEKKNVLYDENRNFDNKNSDNRNFDNKNSDNRNFDYKNCGFDYNEQISKDRDHGFQDNNDSKKNTKNKNEGFISGRNNSNHKNQEYCECRKNLHPEDDNGTDFYNKIELGEYLHNKKHEICDDKNVIHDKRIGIFDDKSSIHDKNHEAFNNKKQMHDKQHGISDNKNRKPNKKHEMSDKSLDSNSLHHHSNKSDISKNNPKLSQNPRSVTPQNLSDISDNCLRFSSDSDGLSAGRRDVSLSDKNINSDYIQGRDLSLSDKNTGSKRDSENVPATLSDRGRKGNGGRSDDLRVSDDKFVGERKRDMSLSDGLKLEKRRGEGPVNKKPSVSDKRKRDKSLINKKQSLSDQFDNEKIKEKLLINKKQSLSDNFDYERSSDRSIIDNKQSLKDQIDYEKNRDTSLINKNSSLSDNFDYEKQGDTSLINKNVSLTDQFHNEVIRDKSLINKKSSLSDNFDYEKHRDTSLINTVLSLSDDLDFSRRQEIIQDYHTATCSSVSFGFSCSKGCYGRKEYWKQEYEDGTCSQSSKTDGRCRCDEEEEEDGEEEEREKERGKERSERGDAPHKVPSDTNQSLWEQQKLRPGTVRRRKKQIGIGVRFSYYVPNRFCPRSGRVDAAHKPVQEYCRCAEKKAPPIEAPSAHTKSGSGDLSSQRPSTSDDDKAPRRKSVTLLPDKADQLDADNDAYLRIVDQNKKVSDWLEPDTSSKAATNETETISFLNAKDPIPSQMGFEGSMVAEEEDAIQKKPKYTLARSRSDPDVIYIRKTVCDCCEGANECIKIYKKHNDFEVHGSYMELPNCEPVDKDVFESIFEYLNPCRYLN
SIO_010081: LOC111059883
subclass of: SO_0000673
so part of: LOC111059883
location: join(2586554..2586573,2588171..2588504,2588535..2589574,2589827..2590371,2592671..2592930,2594397..2594643,2597361..2597629)
location: region:2586554-2597629:1
so has part: feature:2586554-2586573:1:exon
so has part: feature:2588171-2588504:1:exon
so has part: feature:2588535-2589574:1:exon
so has part: feature:2589827-2590371:1:exon
so has part: feature:2592671-2592930:1:exon
so has part: feature:2594397-2594643:1:exon
so has part: feature:2597361-2597629:1:exon

XP_039296420.1
type: Protein
SIO_000068: ncbiprotein

position:2586554:1
position: 2586554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2597629:1
position: 2597629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2586554-2586573:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2588171-2588504:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2588535-2589574:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2589827-2590371:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2592671-2592930:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2594397-2594643:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2597361-2597629:1:exon

LOC111043387
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111043387
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2601517..2713963
location: region:2601517-2713963:1
so has part: feature:2601517-2713963:1:exon
subclass of: SO_0000010

111043387
type: Gene
SIO_000068: ncbigene

position:2601517:1
position: 2601517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2713963:1
position: 2713963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2601517-2713963:1:exon

LOC111043387
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111043387
product: cytochrome b reductase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039441142.1
SIO_010081: LOC111043387
subclass of: SO_0000673
so part of: LOC111043387
location: join(2601517..2601742,2602997..2603245,2697153..2697385,2701681..2701889,2704812..2704888,2711905..2713963)
location: region:2601517-2713963:1
so has part: feature:2601517-2601742:1:exon
so has part: feature:2602997-2603245:1:exon
so has part: feature:2697153-2697385:1:exon
so has part: feature:2701681-2701889:1:exon
so has part: feature:2704812-2704888:1:exon
so has part: feature:2711905-2713963:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2601517-2601742:1:exon

position:2601742:1
position: 2601742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2602997-2603245:1:exon

position:2602997:1
position: 2602997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2603245:1
position: 2603245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2697153-2697385:1:exon

position:2697153:1
position: 2697153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2697385:1
position: 2697385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2701681-2701889:1:exon

position:2701681:1
position: 2701681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2701889:1
position: 2701889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2704812-2704888:1:exon

position:2704812:1
position: 2704812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2704888:1
position: 2704888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2711905-2713963:1:exon

position:2711905:1
position: 2711905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111043387
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111043387
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome b reductase 1
translation: MEEGEGGANPVAPMAEFDKTPPEEGSQGTIPLDDLPPPPLPHSAGTTAISINESQSAPDSAASNESKQEKKKRKEKEAKEKQYQSDYDSGEDDMSCGRWCEYVLVVVLASLLLLSALILVLFWTLYYRKGYAWQESPEHQFNLHPTLMVAGFISFSGFSMLLYRISRCCRQIYVKLFHMLFHALAIPCIVIGFIAVWDSKNLSVPPIKNFYSMHSWMGLITMGLFALQFVVTTFMLAVATCLTGLTQKAILQFGKDYAIWPEESIIMNALAMVLVALGILVSYAVRRDSFGRRPGQSQDGGKLISERL
SIO_010081: LOC111043387
subclass of: SO_0000673
so part of: LOC111043387
location: join(2603004..2603245,2697153..2697385,2701681..2701889,2704812..2704888,2711905..2712070)
location: region:2603004-2712070:1
so has part: feature:2603004-2603245:1:exon
so has part: feature:2697153-2697385:1:exon
so has part: feature:2701681-2701889:1:exon
so has part: feature:2704812-2704888:1:exon
so has part: feature:2711905-2712070:1:exon

XP_039297076.1
type: Protein
SIO_000068: ncbiprotein

position:2603004:1
position: 2603004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2712070:1
position: 2712070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2603004-2603245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2697153-2697385:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2701681-2701889:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2704812-2704888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2711905-2712070:1:exon

LOC120354154
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354154
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2620732..2621587)
location: region:2620732-2621587:-1
so has part: feature:2620732-2621587:-1:exon
subclass of: SO_0000011

120354154
type: Gene
SIO_000068: ncbigene

position:2620732:-1
position: 2620732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2621587:-1
position: 2621587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2620732-2621587:-1:exon

LOC120354154
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC120354154
product: uncharacterized LOC120354154, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XR_005572843.1
SIO_010081: LOC120354154
subclass of: SO_0000673
so part of: LOC120354154
location: complement(join(2620732..2620801,2621045..2621184,2621397..2621587))
location: region:2620732-2621587:-1
so has part: feature:2621397-2621587:-1:exon
so has part: feature:2621045-2621184:-1:exon
so has part: feature:2620732-2620801:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2621397-2621587:-1:exon

position:2621397:-1
position: 2621397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2621045-2621184:-1:exon

position:2621045:-1
position: 2621045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2621184:-1
position: 2621184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2620732-2620801:-1:exon

position:2620801:-1
position: 2620801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354154
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC120354154
product: uncharacterized LOC120354154, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005572846.1
SIO_010081: LOC120354154
subclass of: SO_0000673
so part of: LOC120354154
location: complement(join(2620738..2620752,2621045..2621184,2621397..2621587))
location: region:2620738-2621587:-1
so has part: feature:2621397-2621587:-1:exon
so has part: feature:2621045-2621184:-1:exon
so has part: feature:2620738-2620752:-1:exon

position:2620738:-1
position: 2620738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2621397-2621587:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2621045-2621184:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2620738-2620752:-1:exon

position:2620752:-1
position: 2620752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354154
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC120354154
product: uncharacterized LOC120354154, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XR_005572844.1
SIO_010081: LOC120354154
subclass of: SO_0000673
so part of: LOC120354154
location: complement(join(2620741..2620850,2621045..2621184,2621397..2621587))
location: region:2620741-2621587:-1
so has part: feature:2621397-2621587:-1:exon
so has part: feature:2621045-2621184:-1:exon
so has part: feature:2620741-2620850:-1:exon

position:2620741:-1
position: 2620741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2621397-2621587:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2621045-2621184:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2620741-2620850:-1:exon

position:2620850:-1
position: 2620850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120354154
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC120354154
product: uncharacterized LOC120354154, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XR_005572845.1
SIO_010081: LOC120354154
subclass of: SO_0000673
so part of: LOC120354154
location: complement(join(2620873..2620988,2621087..2621184,2621397..2621586))
location: region:2620873-2621586:-1
so has part: feature:2621397-2621586:-1:exon
so has part: feature:2621087-2621184:-1:exon
so has part: feature:2620873-2620988:-1:exon

position:2620873:-1
position: 2620873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2621586:-1
position: 2621586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2621397-2621586:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2621087-2621184:-1:exon

position:2621087:-1
position: 2621087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2620873-2620988:-1:exon

position:2620988:-1
position: 2620988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111050575
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111050575
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2631848..2641097)
location: region:2631848-2641097:-1
so has part: feature:2631848-2641097:-1:exon
subclass of: SO_0000011

111050575
type: Gene
SIO_000068: ncbigene

position:2631848:-1
position: 2631848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2641097:-1
position: 2641097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2631848-2641097:-1:exon

LOC111050575
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC111050575
product: uncharacterized LOC111050575, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_005572851.1
SIO_010081: LOC111050575
subclass of: SO_0000673
so part of: LOC111050575
location: complement(join(2631848..2631984,2634307..2634408,2640838..2641097))
location: region:2631848-2641097:-1
so has part: feature:2640838-2641097:-1:exon
so has part: feature:2634307-2634408:-1:exon
so has part: feature:2631848-2631984:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2640838-2641097:-1:exon

position:2640838:-1
position: 2640838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2634307-2634408:-1:exon

position:2634307:-1
position: 2634307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2634408:-1
position: 2634408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2631848-2631984:-1:exon

position:2631984:-1
position: 2631984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111050575
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC111050575
product: uncharacterized LOC111050575, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XR_005572852.1
SIO_010081: LOC111050575
subclass of: SO_0000673
so part of: LOC111050575
location: complement(join(2631848..2631984,2634307..2634408,2636579..2636784))
location: region:2631848-2636784:-1
so has part: feature:2636579-2636784:-1:exon
so has part: feature:2634307-2634408:-1:exon
so has part: feature:2631848-2631984:-1:exon

position:2636784:-1
position: 2636784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2636579-2636784:-1:exon

position:2636579:-1
position: 2636579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2634307-2634408:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2631848-2631984:-1:exon

LOC111043388
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111043388
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2720614..2743067)
location: region:2720614-2743067:-1
so has part: feature:2720614-2743067:-1:exon
subclass of: SO_0000010

111043388
type: Gene
SIO_000068: ncbigene

position:2720614:-1
position: 2720614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2743067:-1
position: 2743067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2720614-2743067:-1:exon

LOC111043388
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111043388
product: succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 1138 long SRA reads, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_039440488.1
SIO_010081: LOC111043388
subclass of: SO_0000673
so part of: LOC111043388
location: complement(join(2720614..2721514,2730933..2731157,2732127..2732322,2738147..2738290,2741249..2741424,2742935..2743067))
location: region:2720614-2743067:-1
so has part: feature:2742935-2743067:-1:exon
so has part: feature:2741249-2741424:-1:exon
so has part: feature:2738147-2738290:-1:exon
so has part: feature:2732127-2732322:-1:exon
so has part: feature:2730933-2731157:-1:exon
so has part: feature:2720614-2721514:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2742935-2743067:-1:exon

position:2742935:-1
position: 2742935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2741249-2741424:-1:exon

position:2741249:-1
position: 2741249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2741424:-1
position: 2741424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2738147-2738290:-1:exon

position:2738147:-1
position: 2738147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2738290:-1
position: 2738290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2732127-2732322:-1:exon

position:2732127:-1
position: 2732127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2732322:-1
position: 2732322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2730933-2731157:-1:exon

position:2730933:-1
position: 2730933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2731157:-1
position: 2731157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2720614-2721514:-1:exon

position:2721514:-1
position: 2721514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111043388
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111043388
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial
translation: MAAPSIGMLCRTSNFALAQVRHVSSSNAVGGLKAAAAAAASPQSDAAPRIKKFAIYRWNPDEPQKKPEMQIFDVDLNKCGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNISGTNTLACITKIDTNLSAPQKIYPLPHQYVIKDLVPDMNNFYEQYKMIKPWLIREKEPEAGQAQYLQSIDDRAKLDGLYECILCACCTTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDEATAQRLTALKDPFSVFRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGFAKKGEPQLPTDSLHQKAAA
SIO_010081: LOC111043388
subclass of: SO_0000673
so part of: LOC111043388
location: complement(join(2721401..2721514,2730933..2731157,2732127..2732322,2738147..2738290,2741249..2741424,2742935..2742991))
location: region:2721401-2742991:-1
so has part: feature:2742935-2742991:-1:exon
so has part: feature:2741249-2741424:-1:exon
so has part: feature:2738147-2738290:-1:exon
so has part: feature:2732127-2732322:-1:exon
so has part: feature:2730933-2731157:-1:exon
so has part: feature:2721401-2721514:-1:exon

XP_039296422.1
type: Protein
SIO_000068: ncbiprotein

position:2721401:-1
position: 2721401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2742991:-1
position: 2742991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2742935-2742991:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2741249-2741424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2738147-2738290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2732127-2732322:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2730933-2731157:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2721401-2721514:-1:exon

LOC111051895
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111051895
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2743294..2771499
location: region:2743294-2771499:1
so has part: feature:2743294-2771499:1:exon
subclass of: SO_0000010

111051895
type: Gene
SIO_000068: ncbigene

position:2743294:1
position: 2743294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2771499:1
position: 2771499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2743294-2771499:1:exon

LOC111051895
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111051895
product: dnaJ homolog subfamily C member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 196 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_039440489.1
SIO_010081: LOC111051895
subclass of: SO_0000673
so part of: LOC111051895
location: join(2743294..2743552,2746272..2746441,2747655..2747756,2751890..2752108,2760342..2760451,2763649..2763786,2765310..2765619,2768377..2768694,2770620..2771499)
location: region:2743294-2771499:1
so has part: feature:2743294-2743552:1:exon
so has part: feature:2746272-2746441:1:exon
so has part: feature:2747655-2747756:1:exon
so has part: feature:2751890-2752108:1:exon
so has part: feature:2760342-2760451:1:exon
so has part: feature:2763649-2763786:1:exon
so has part: feature:2765310-2765619:1:exon
so has part: feature:2768377-2768694:1:exon
so has part: feature:2770620-2771499:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2743294-2743552:1:exon

position:2743552:1
position: 2743552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2746272-2746441:1:exon

position:2746272:1
position: 2746272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2746441:1
position: 2746441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2747655-2747756:1:exon

position:2747655:1
position: 2747655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2747756:1
position: 2747756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2751890-2752108:1:exon

position:2751890:1
position: 2751890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2752108:1
position: 2752108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2760342-2760451:1:exon

position:2760342:1
position: 2760342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2760451:1
position: 2760451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2763649-2763786:1:exon

position:2763649:1
position: 2763649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2763786:1
position: 2763786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2765310-2765619:1:exon

position:2765310:1
position: 2765310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2765619:1
position: 2765619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2768377-2768694:1:exon

position:2768377:1
position: 2768377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2768694:1
position: 2768694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2770620-2771499:1:exon

position:2770620:1
position: 2770620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111051895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111051895
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 1
translation: MASLSGSSFSLPFLILVFIFGITSVFGFATDEMEVFDAVEEINQNFYTLLDIPQNADASAIKKAFRRLSLVLHPDKNDAPDAEVQFRQLVAMYDILKDPNKRRCYDNVLVNGLPDWRQAVYYYRRVRKMGLAEMTAILFVIISIGQYLVGWAAYLEKKYTVEEYLSTKSRKLHRKQKKNKGDTTSLIQEFEIELEKPSAMDTLPFQIPRLIWFLLVSAPPLTYQWLREYLEERQRQKLLQAEEQDASSEEDDVPPQPRQPRRRKPAFSVPEIKDGAPAKQNGRQTASPPPPTAASPPPVSGGLWTDDDLLELTRLVKKYPMGTLERWERIGEALGRSANEVAHMAHKVKDNMVRTLTSKRQQRRMKDDSEEEEEEDSSNNEGEEGEEMVEVEEEPRKVKTKGGKHGAAGEGAGGKGWSQLQQKALETALAKYPKNSAQDRWDKIAKCVPGKTKEECMQRFKHLVDIVKKKKDQETNNAESTQDTQQCVQATESAA
SIO_010081: LOC111051895
subclass of: SO_0000673
so part of: LOC111051895
location: join(2746280..2746441,2747655..2747756,2751890..2752108,2760342..2760451,2763649..2763786,2765310..2765619,2768377..2768694,2770620..2770748)
location: region:2746280-2770748:1
so has part: feature:2746280-2746441:1:exon
so has part: feature:2747655-2747756:1:exon
so has part: feature:2751890-2752108:1:exon
so has part: feature:2760342-2760451:1:exon
so has part: feature:2763649-2763786:1:exon
so has part: feature:2765310-2765619:1:exon
so has part: feature:2768377-2768694:1:exon
so has part: feature:2770620-2770748:1:exon

XP_039296423.1
type: Protein
SIO_000068: ncbiprotein

position:2746280:1
position: 2746280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2770748:1
position: 2770748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2746280-2746441:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2747655-2747756:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2751890-2752108:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2760342-2760451:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2763649-2763786:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2765310-2765619:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2768377-2768694:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2770620-2770748:1:exon

LOC111051896
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111051896
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2774366..2785858
location: region:2774366-2785858:1
so has part: feature:2774366-2785858:1:exon
subclass of: SO_0000010

111051896
type: Gene
SIO_000068: ncbigene

position:2774366:1
position: 2774366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2785858:1
position: 2785858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2774366-2785858:1:exon

LOC111051896
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111051896
product: forkhead box protein I1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 long SRA reads, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_022338477.2
SIO_010081: LOC111051896
subclass of: SO_0000673
so part of: LOC111051896
location: join(2774366..2774499,2777437..2777690,2779795..2779918,2781015..2781182,2782260..2782365,2783915..2785858)
location: region:2774366-2785858:1
so has part: feature:2774366-2774499:1:exon
so has part: feature:2777437-2777690:1:exon
so has part: feature:2779795-2779918:1:exon
so has part: feature:2781015-2781182:1:exon
so has part: feature:2782260-2782365:1:exon
so has part: feature:2783915-2785858:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2774366-2774499:1:exon

position:2774499:1
position: 2774499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2777437-2777690:1:exon

position:2777437:1
position: 2777437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2777690:1
position: 2777690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2779795-2779918:1:exon

position:2779795:1
position: 2779795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2779918:1
position: 2779918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2781015-2781182:1:exon

position:2781015:1
position: 2781015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2781182:1
position: 2781182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2782260-2782365:1:exon

position:2782260:1
position: 2782260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2782365:1
position: 2782365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2783915-2785858:1:exon

position:2783915:1
position: 2783915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111051896
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111051896
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein I1
translation: MADLAGVRTATCDWLNSPHPSCTPSPPSRHPLAPPPTLNSPSHLHHHQLSSSTPSPPSSSSSASQRQSRDGKPPYSYASLIRLAISNSVQGKMTLSEIYQFIIQTFPYYRDASTGWKNSIRHNLSLNKCFTKVARPKDDPGKGSYWAIDHTHSQDGGGQQDGGVPRKKVKLPRVSPYSPECNSNSSDGRLTLKMARSSTTPTPSENCHSLDEFSLGDSKEVSAVISKLLSHYGVDPSDSQSDYQPCQTDFQEKSDYQGCQTDYQANRTGASSSSSDYFHPTPDTNLEPSQNYYQEFPQLVDNNSVANTLPTYSENSRYAADVPNMADESLRYGVGESASRYGTSSNRSIEENSFKYNNFSPYKASNNFESGSSSSCYYNNHQQNQNSDYYYSGLKSTSYEYIRVNEEDRCGSAGGHYVGNNNKPVLPEGNVATFETGAQRGTTAPSYWSSPATDQSCRSPYCASGSPLAHGSANGEASLSPHYNQMAPDLNGAMMASSFDFGANSKWDTLL
SIO_010081: LOC111051896
subclass of: SO_0000673
so part of: LOC111051896
location: join(2777464..2777690,2779795..2779918,2781015..2781182,2782260..2782365,2783915..2784825)
location: region:2777464-2784825:1
so has part: feature:2777464-2777690:1:exon
so has part: feature:2779795-2779918:1:exon
so has part: feature:2781015-2781182:1:exon
so has part: feature:2782260-2782365:1:exon
so has part: feature:2783915-2784825:1:exon

XP_022194169.1
type: Protein
SIO_000068: ncbiprotein

position:2777464:1
position: 2777464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2784825:1
position: 2784825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2777464-2777690:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2779795-2779918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2781015-2781182:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2782260-2782365:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2783915-2784825:1:exon

LOC120354156
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354156
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2800979..2817754
location: region:2800979-2817754:1
so has part: feature:2800979-2817754:1:exon
subclass of: SO_0000010

120354156
type: Gene
SIO_000068: ncbigene

position:2800979:1
position: 2800979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2817754:1
position: 2817754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2800979-2817754:1:exon

LOC120354156
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120354156
product: NECAP-like protein CG9132
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 long SRA reads, 7 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_039440490.1
SIO_010081: LOC120354156
subclass of: SO_0000673
so part of: LOC120354156
location: join(2800979..2801123,2805992..2806197,2809815..2810005,2812068..2812285,2816967..2817754)
location: region:2800979-2817754:1
so has part: feature:2800979-2801123:1:exon
so has part: feature:2805992-2806197:1:exon
so has part: feature:2809815-2810005:1:exon
so has part: feature:2812068-2812285:1:exon
so has part: feature:2816967-2817754:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2800979-2801123:1:exon

position:2801123:1
position: 2801123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2805992-2806197:1:exon

position:2805992:1
position: 2805992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2806197:1
position: 2806197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2809815-2810005:1:exon

position:2809815:1
position: 2809815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2810005:1
position: 2810005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2812068-2812285:1:exon

position:2812068:1
position: 2812068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2812285:1
position: 2812285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2816967-2817754:1:exon

position:2816967:1
position: 2816967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120354156
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120354156
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NECAP-like protein CG9132
translation: METYESVLLVKSEVFVFKIPPRTTNRAYRAADWNLEEPQWTGRMRLVAKGKECVLKLEDKTSGELFAKCPIPDYPGPAVEAVSDSSRYFVLRIQDDNGRNAFIGVGFQDRSDSFDLNVALQDHFKWVKKSAEIEKEKEEPKQQLDLRFKEGETIKINMKITKKDGSEVSSSKPKAAARPGGAAQGFLPPPPGGLKIAPPPAPSVHSSPQHQANAKGGQESWGEFTSAGGQGETSSSSSTATTQQATTPSNPNWVQF
SIO_010081: LOC120354156
subclass of: SO_0000673
so part of: LOC120354156
location: join(2801038..2801123,2805992..2806197,2809815..2810005,2812068..2812285,2816967..2817036)
location: region:2801038-2817036:1
so has part: feature:2801038-2801123:1:exon
so has part: feature:2805992-2806197:1:exon
so has part: feature:2809815-2810005:1:exon
so has part: feature:2812068-2812285:1:exon
so has part: feature:2816967-2817036:1:exon

XP_039296424.1
type: Protein
SIO_000068: ncbiprotein

position:2801038:1
position: 2801038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2817036:1
position: 2817036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2801038-2801123:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2805992-2806197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2809815-2810005:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2812068-2812285:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2816967-2817036:1:exon

LOC111060835
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111060835
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2836905..2903817
location: region:2836905-2903817:1
so has part: feature:2836905-2903817:1:exon
subclass of: SO_0000010

111060835
type: Gene
SIO_000068: ncbigene

position:2836905:1
position: 2836905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2903817:1
position: 2903817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2836905-2903817:1:exon

LOC111060835
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111060835
product: tyrosine decarboxylase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 599 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_039440499.1
SIO_010081: LOC111060835
subclass of: SO_0000673
so part of: LOC111060835
location: join(2836905..2837082,2886993..2887106,2888354..2888405,2888679..2888749,2889619..2889855,2891260..2891386,2892306..2892487,2894737..2894967,2896597..2896762,2898033..2898103,2899619..2899896,2901953..2902027,2903400..2903817)
location: region:2836905-2903817:1
so has part: feature:2836905-2837082:1:exon
so has part: feature:2886993-2887106:1:exon
so has part: feature:2888354-2888405:1:exon
so has part: feature:2888679-2888749:1:exon
so has part: feature:2889619-2889855:1:exon
so has part: feature:2891260-2891386:1:exon
so has part: feature:2892306-2892487:1:exon
so has part: feature:2894737-2894967:1:exon
so has part: feature:2896597-2896762:1:exon
so has part: feature:2898033-2898103:1:exon
so has part: feature:2899619-2899896:1:exon
so has part: feature:2901953-2902027:1:exon
so has part: feature:2903400-2903817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2836905-2837082:1:exon

position:2837082:1
position: 2837082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2886993-2887106:1:exon

position:2886993:1
position: 2886993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2887106:1
position: 2887106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2888354-2888405:1:exon

position:2888354:1
position: 2888354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2888405:1
position: 2888405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2888679-2888749:1:exon

position:2888679:1
position: 2888679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2888749:1
position: 2888749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2889619-2889855:1:exon

position:2889619:1
position: 2889619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2889855:1
position: 2889855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2891260-2891386:1:exon

position:2891260:1
position: 2891260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2891386:1
position: 2891386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2892306-2892487:1:exon

position:2892306:1
position: 2892306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2892487:1
position: 2892487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2894737-2894967:1:exon

position:2894737:1
position: 2894737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2894967:1
position: 2894967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2896597-2896762:1:exon

position:2896597:1
position: 2896597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2896762:1
position: 2896762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2898033-2898103:1:exon

position:2898033:1
position: 2898033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2898103:1
position: 2898103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2899619-2899896:1:exon

position:2899619:1
position: 2899619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2899896:1
position: 2899896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2901953-2902027:1:exon

position:2901953:1
position: 2901953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2902027:1
position: 2902027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2903400-2903817:1:exon

position:2903400:1
position: 2903400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111051900
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111051900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2863495..3003939)
location: region:2863495-3003939:-1
so has part: feature:2863495-3003939:-1:exon
subclass of: SO_0000010

111051900
type: Gene
SIO_000068: ncbigene

position:2863495:-1
position: 2863495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3003939:-1
position: 3003939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2863495-3003939:-1:exon

LOC111051900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111051900
product: nucleolar GTP-binding protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 314 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_039440497.1
SIO_010081: LOC111051900
subclass of: SO_0000673
so part of: LOC111051900
location: complement(join(2863495..2865541,2866608..2866844,3003784..3003939))
location: region:2863495-3003939:-1
so has part: feature:3003784-3003939:-1:exon
so has part: feature:2866608-2866844:-1:exon
so has part: feature:2863495-2865541:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3003784-3003939:-1:exon

position:3003784:-1
position: 3003784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2866608-2866844:-1:exon

position:2866608:-1
position: 2866608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2866844:-1
position: 2866844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2863495-2865541:-1:exon

position:2865541:-1
position: 2865541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111051900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111051900
product: nucleolar GTP-binding protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 299 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_039440496.1
SIO_010081: LOC111051900
subclass of: SO_0000673
so part of: LOC111051900
location: complement(join(2863495..2865541,2866608..2866844,3003007..3003152))
location: region:2863495-3003152:-1
so has part: feature:3003007-3003152:-1:exon
so has part: feature:2866608-2866844:-1:exon
so has part: feature:2863495-2865541:-1:exon

position:3003152:-1
position: 3003152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3003007-3003152:-1:exon

position:3003007:-1
position: 3003007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2866608-2866844:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2863495-2865541:-1:exon

LOC111051900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111051900
product: nucleolar GTP-binding protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 297 long SRA reads, 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_039440494.1
SIO_010081: LOC111051900
subclass of: SO_0000673
so part of: LOC111051900
location: complement(join(2863495..2865541,2866608..2866844,2937363..2937462))
location: region:2863495-2937462:-1
so has part: feature:2937363-2937462:-1:exon
so has part: feature:2866608-2866844:-1:exon
so has part: feature:2863495-2865541:-1:exon

position:2937462:-1
position: 2937462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2937363-2937462:-1:exon

position:2937363:-1
position: 2937363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2866608-2866844:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2863495-2865541:-1:exon

LOC111051900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111051900
product: nucleolar GTP-binding protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 296 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_039440498.1
SIO_010081: LOC111051900
subclass of: SO_0000673
so part of: LOC111051900
location: complement(join(2863495..2865541,2866608..2866844,2894755..2894772))
location: region:2863495-2894772:-1
so has part: feature:2894755-2894772:-1:exon
so has part: feature:2866608-2866844:-1:exon
so has part: feature:2863495-2865541:-1:exon

position:2894772:-1
position: 2894772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2894755-2894772:-1:exon

position:2894755:-1
position: 2894755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2866608-2866844:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2863495-2865541:-1:exon

LOC111051900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111051900
product: nucleolar GTP-binding protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 300 long SRA reads, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_039440495.1
SIO_010081: LOC111051900
subclass of: SO_0000673
so part of: LOC111051900
location: complement(join(2863495..2865541,2866608..2866844,2882581..2882645))
location: region:2863495-2882645:-1
so has part: feature:2882581-2882645:-1:exon
so has part: feature:2866608-2866844:-1:exon
so has part: feature:2863495-2865541:-1:exon

position:2882645:-1
position: 2882645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2882581-2882645:-1:exon

position:2882581:-1
position: 2882581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2866608-2866844:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2863495-2865541:-1:exon

LOC111051900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111051900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar GTP-binding protein 2
translation: MAKTKSETKAPRREGIYRASHSMNPNRPREGVKGVAKVRDRSTINRLQMYRNFKPKRNRVGRIIHAAPFQGRVASGAVARVEPNRKWFENSRVIGQKALQKFQEELGQAVKNPYDMVMKMTKLPITLLNETAKNSRVHILDTESFENTFGAKKTRKRPNLKVKDEEHLKEVIQSSAESYTEDKDYDRVKEDTGVKAAARDWIMSAGMSKRIWNELYKVIDSSDVILMVLDARDPQGTRSKHIEEFLKKEKPNKHLVFVLNKVDLIPTWVTQRWVAILSKEYPTIAFHASMKHPFGKGAVINLLRQFAKLHTDRKQISVGFVGYPNVGKSSVINALRAKKVCKVAPIAGETKVWQYITLMRRIYLIDCPGVVYNTAQNESDTEKVLKGVVRVELVTYPEQYIPALLERVKAEHLSRTYGIEHWENCDDFLKQMSIKSGKLLKGGEPDATAISKMLLNDWQRGKLPFYTAPAGFENPLSKEDATISGEGGVVEETETVPAKEGVAEPAGDTTSADQGSSVKKLPADFKLVQDFRKIRVIPEFPGEEELLDTETLERDLEEAKQKKEEAAQKRRMAAEDGDSSDMFSEDEDEEQVADVRKKVMADEDAAAKKVDANLTSKQRRALLRKMKRKKTGSDFYDVTNVKNRNRERKVPKSDKRK
SIO_010081: LOC111051900
subclass of: SO_0000673
so part of: LOC111051900
location: complement(join(2863778..2865541,2866608..2866817))
location: region:2863778-2866817:-1
so has part: feature:2866608-2866817:-1:exon
so has part: feature:2863778-2865541:-1:exon

XP_039296428.1
type: Protein
SIO_000068: ncbiprotein

position:2863778:-1
position: 2863778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2866817:-1
position: 2866817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2866608-2866817:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2863778-2865541:-1:exon

LOC111051900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111051900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar GTP-binding protein 2
translation: MAKTKSETKAPRREGIYRASHSMNPNRPREGVKGVAKVRDRSTINRLQMYRNFKPKRNRVGRIIHAAPFQGRVASGAVARVEPNRKWFENSRVIGQKALQKFQEELGQAVKNPYDMVMKMTKLPITLLNETAKNSRVHILDTESFENTFGAKKTRKRPNLKVKDEEHLKEVIQSSAESYTEDKDYDRVKEDTGVKAAARDWIMSAGMSKRIWNELYKVIDSSDVILMVLDARDPQGTRSKHIEEFLKKEKPNKHLVFVLNKVDLIPTWVTQRWVAILSKEYPTIAFHASMKHPFGKGAVINLLRQFAKLHTDRKQISVGFVGYPNVGKSSVINALRAKKVCKVAPIAGETKVWQYITLMRRIYLIDCPGVVYNTAQNESDTEKVLKGVVRVELVTYPEQYIPALLERVKAEHLSRTYGIEHWENCDDFLKQMSIKSGKLLKGGEPDATAISKMLLNDWQRGKLPFYTAPAGFENPLSKEDATISGEGGVVEETETVPAKEGVAEPAGDTTSADQGSSVKKLPADFKLVQDFRKIRVIPEFPGEEELLDTETLERDLEEAKQKKEEAAQKRRMAAEDGDSSDMFSEDEDEEQVADVRKKVMADEDAAAKKVDANLTSKQRRALLRKMKRKKTGSDFYDVTNVKNRNRERKVPKSDKRK
SIO_010081: LOC111051900
subclass of: SO_0000673
so part of: LOC111051900
location: complement(join(2863778..2865541,2866608..2866817))
location: region:2863778-2866817:-1
so has part: feature:2866608-2866817:-1:exon
so has part: feature:2863778-2865541:-1:exon

XP_039296429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2866608-2866817:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2863778-2865541:-1:exon

LOC111051900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111051900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar GTP-binding protein 2
translation: MAKTKSETKAPRREGIYRASHSMNPNRPREGVKGVAKVRDRSTINRLQMYRNFKPKRNRVGRIIHAAPFQGRVASGAVARVEPNRKWFENSRVIGQKALQKFQEELGQAVKNPYDMVMKMTKLPITLLNETAKNSRVHILDTESFENTFGAKKTRKRPNLKVKDEEHLKEVIQSSAESYTEDKDYDRVKEDTGVKAAARDWIMSAGMSKRIWNELYKVIDSSDVILMVLDARDPQGTRSKHIEEFLKKEKPNKHLVFVLNKVDLIPTWVTQRWVAILSKEYPTIAFHASMKHPFGKGAVINLLRQFAKLHTDRKQISVGFVGYPNVGKSSVINALRAKKVCKVAPIAGETKVWQYITLMRRIYLIDCPGVVYNTAQNESDTEKVLKGVVRVELVTYPEQYIPALLERVKAEHLSRTYGIEHWENCDDFLKQMSIKSGKLLKGGEPDATAISKMLLNDWQRGKLPFYTAPAGFENPLSKEDATISGEGGVVEETETVPAKEGVAEPAGDTTSADQGSSVKKLPADFKLVQDFRKIRVIPEFPGEEELLDTETLERDLEEAKQKKEEAAQKRRMAAEDGDSSDMFSEDEDEEQVADVRKKVMADEDAAAKKVDANLTSKQRRALLRKMKRKKTGSDFYDVTNVKNRNRERKVPKSDKRK
SIO_010081: LOC111051900
subclass of: SO_0000673
so part of: LOC111051900
location: complement(join(2863778..2865541,2866608..2866817))
location: region:2863778-2866817:-1
so has part: feature:2866608-2866817:-1:exon
so has part: feature:2863778-2865541:-1:exon

XP_039296430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2866608-2866817:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2863778-2865541:-1:exon

LOC111051900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111051900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar GTP-binding protein 2
translation: MAKTKSETKAPRREGIYRASHSMNPNRPREGVKGVAKVRDRSTINRLQMYRNFKPKRNRVGRIIHAAPFQGRVASGAVARVEPNRKWFENSRVIGQKALQKFQEELGQAVKNPYDMVMKMTKLPITLLNETAKNSRVHILDTESFENTFGAKKTRKRPNLKVKDEEHLKEVIQSSAESYTEDKDYDRVKEDTGVKAAARDWIMSAGMSKRIWNELYKVIDSSDVILMVLDARDPQGTRSKHIEEFLKKEKPNKHLVFVLNKVDLIPTWVTQRWVAILSKEYPTIAFHASMKHPFGKGAVINLLRQFAKLHTDRKQISVGFVGYPNVGKSSVINALRAKKVCKVAPIAGETKVWQYITLMRRIYLIDCPGVVYNTAQNESDTEKVLKGVVRVELVTYPEQYIPALLERVKAEHLSRTYGIEHWENCDDFLKQMSIKSGKLLKGGEPDATAISKMLLNDWQRGKLPFYTAPAGFENPLSKEDATISGEGGVVEETETVPAKEGVAEPAGDTTSADQGSSVKKLPADFKLVQDFRKIRVIPEFPGEEELLDTETLERDLEEAKQKKEEAAQKRRMAAEDGDSSDMFSEDEDEEQVADVRKKVMADEDAAAKKVDANLTSKQRRALLRKMKRKKTGSDFYDVTNVKNRNRERKVPKSDKRK
SIO_010081: LOC111051900
subclass of: SO_0000673
so part of: LOC111051900
location: complement(join(2863778..2865541,2866608..2866817))
location: region:2863778-2866817:-1
so has part: feature:2866608-2866817:-1:exon
so has part: feature:2863778-2865541:-1:exon

XP_039296431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2866608-2866817:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2863778-2865541:-1:exon

LOC111051900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111051900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar GTP-binding protein 2
translation: MAKTKSETKAPRREGIYRASHSMNPNRPREGVKGVAKVRDRSTINRLQMYRNFKPKRNRVGRIIHAAPFQGRVASGAVARVEPNRKWFENSRVIGQKALQKFQEELGQAVKNPYDMVMKMTKLPITLLNETAKNSRVHILDTESFENTFGAKKTRKRPNLKVKDEEHLKEVIQSSAESYTEDKDYDRVKEDTGVKAAARDWIMSAGMSKRIWNELYKVIDSSDVILMVLDARDPQGTRSKHIEEFLKKEKPNKHLVFVLNKVDLIPTWVTQRWVAILSKEYPTIAFHASMKHPFGKGAVINLLRQFAKLHTDRKQISVGFVGYPNVGKSSVINALRAKKVCKVAPIAGETKVWQYITLMRRIYLIDCPGVVYNTAQNESDTEKVLKGVVRVELVTYPEQYIPALLERVKAEHLSRTYGIEHWENCDDFLKQMSIKSGKLLKGGEPDATAISKMLLNDWQRGKLPFYTAPAGFENPLSKEDATISGEGGVVEETETVPAKEGVAEPAGDTTSADQGSSVKKLPADFKLVQDFRKIRVIPEFPGEEELLDTETLERDLEEAKQKKEEAAQKRRMAAEDGDSSDMFSEDEDEEQVADVRKKVMADEDAAAKKVDANLTSKQRRALLRKMKRKKTGSDFYDVTNVKNRNRERKVPKSDKRK
SIO_010081: LOC111051900
subclass of: SO_0000673
so part of: LOC111051900
location: complement(join(2863778..2865541,2866608..2866817))
location: region:2863778-2866817:-1
so has part: feature:2866608-2866817:-1:exon
so has part: feature:2863778-2865541:-1:exon

XP_039296432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2866608-2866817:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2863778-2865541:-1:exon

LOC111060835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111060835
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine decarboxylase
translation: MLSDIIGCIGFSWAASPACTELETIVLDWLGKAIGLPNEFLAFSEGSKGGGVIQTSASECVLVTMLAARAQAIKRLKQQHPFVEEGILLSKLMAYCSKEAHSCVEKAAMICFVKLRILEPDDRCALRGTTLRQAMEEDEAMGLIPFFVSTTLGTTSCCSFDNLQEIGPVCSKFPAVWLHVDAAYAGNAFICPELKPLLAGIHWADSFNTNLNKWMLVNFDCSTMWVRDRIRLTSALVVDPLYLQHGYSNSTIDYRHWGVPLSRRFRSLKIWFVMRSYGISGLQAYVRHHCNLAKQFEQLVRKDARFEVCNEVKLGLVCFRLRGTDKLNEKLLSNINGSGKIHMVPASVHDKYVIRFCATAQNATSYDVEHAWEVITEFASELLQSLNIEKEQENSDEVFELERKRRENLLAYKRSFFVRMVSDPKIYNPKIAKTLPGPRRHGSQHRGGSCPGGGGVSQDGVDEEEEEEDEEEGENGSGVTVHTPLASWISWPLAFLFQNDDTGASKVPVRFRHLDTMVRLNTRRESGSPSHSRSSASPSLSPEGQQDNNSCLSSKSADNDGSRSPRRSTTPQPQRKE
SIO_010081: LOC111060835
subclass of: SO_0000673
so part of: LOC111060835
location: join(2887068..2887106,2888354..2888405,2888679..2888749,2889619..2889855,2891260..2891386,2892306..2892487,2894737..2894967,2896597..2896762,2898033..2898103,2899619..2899896,2901953..2902027,2903400..2903604)
location: region:2887068-2903604:1
so has part: feature:2887068-2887106:1:exon
so has part: feature:2888354-2888405:1:exon
so has part: feature:2888679-2888749:1:exon
so has part: feature:2889619-2889855:1:exon
so has part: feature:2891260-2891386:1:exon
so has part: feature:2892306-2892487:1:exon
so has part: feature:2894737-2894967:1:exon
so has part: feature:2896597-2896762:1:exon
so has part: feature:2898033-2898103:1:exon
so has part: feature:2899619-2899896:1:exon
so has part: feature:2901953-2902027:1:exon
so has part: feature:2903400-2903604:1:exon

XP_039296433.1
type: Protein
SIO_000068: ncbiprotein

position:2887068:1
position: 2887068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2903604:1
position: 2903604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2887068-2887106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2888354-2888405:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2888679-2888749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2889619-2889855:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2891260-2891386:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2892306-2892487:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2894737-2894967:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2896597-2896762:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2898033-2898103:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2899619-2899896:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2901953-2902027:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2903400-2903604:1:exon

LOC111051898
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111051898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2919963..2937423)
location: region:2919963-2937423:-1
so has part: feature:2919963-2937423:-1:exon
subclass of: SO_0000010

111051898
type: Gene
SIO_000068: ncbigene

position:2919963:-1
position: 2919963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2937423:-1
position: 2937423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2919963-2937423:-1:exon

LOC111051898
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111051898
product: dihydrofolate reductase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_039440500.1
SIO_010081: LOC111051898
subclass of: SO_0000673
so part of: LOC111051898
location: complement(join(2919963..2922603,2937363..2937423))
location: region:2919963-2937423:-1
so has part: feature:2937363-2937423:-1:exon
so has part: feature:2919963-2922603:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2937363-2937423:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2919963-2922603:-1:exon

position:2922603:-1
position: 2922603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111051898
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111051898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydrofolate reductase
translation: MSQTRGYSLKAIVAMCSNRGIGQAGNLPWRLKKELSHFAKMTTNVEVEGKKNAVIMGHNTWRSIPQKWRPLQKRINVVLSRSVTDLGDGVMVCKSLEEALASLHKDPQIESVWVIGGSSVYAEAMPVCDVVYLTEVLKEFECDTFLPELPEGFREVNDDPRVCYEVQEEDGVRYQYKVYRK
SIO_010081: LOC111051898
subclass of: SO_0000673
so part of: LOC111051898
location: complement(2920943..2921488)
location: region:2920943-2921488:-1
so has part: feature:2920943-2921488:-1:exon

XP_039296434.1
type: Protein
SIO_000068: ncbiprotein

position:2920943:-1
position: 2920943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2921488:-1
position: 2921488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2920943-2921488:-1:exon

LOC120354157
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120354157
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2946807..2998966
location: region:2946807-2998966:1
so has part: feature:2946807-2998966:1:exon
subclass of: SO_0000010

120354157
type: Gene
SIO_000068: ncbigene

position:2946807:1
position: 2946807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2998966:1
position: 2998966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2946807-2998966:1:exon