Nilaparvata lugens isolate BPH chromosome 11, ASM1435652v1, whole genome shotgun sequence.
type: Entry
definition: Nilaparvata lugens isolate BPH chromosome 11, ASM1435652v1, whole genome shotgun sequence.
sequence version: NC_052514.1
sequence date: 2021-02-12
sequence: sequence
division: CON
label: NC_052514.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA695432
dblink: SAMN13382557
keyword: WGS
keyword: RefSeq
source: Nilaparvata lugens (brown planthopper)
organism: Nilaparvata lugens
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Auchenorrhyncha; Fulgoroidea; Delphacidae; Delphacinae; Nilaparvata.
reference: 1
references: 32780934
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM025315.1.\nAssembly name: ASM1435652v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Huazhong Agricultural\nUniversity on 2020/09/09. The original whole-genome shotgun project\nhas the accession WOVF00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Huazhong Agricultural University\nAssembly Method :: WTDBG v. 2.1; SmartDenovo v. 1.5; HiC-Pro\n v. 2.7.8\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 418x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Nilaparvata lugens Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 45945927
topology: linear
so has quality: SO_0000987
location: 1..45945927
location: region:1-45945927:1
RO_0002162: 108931

NC_052514
type: RefSeq
SIO_000068: refseq

PRJNA695432
type: BioProject
SIO_000068: bioproject

SAMN13382557
type: BioSample
SIO_000068: biosample

1
title: Chromosomal-level genomes of three rice planthoppers provide new insights into sex chromosome evolution
author: Ma, W.
author: Le, X.
author: Hua, H.
author: Chen, M.
author: Guo, M.
author: He, K.
author: Zhao, J.
author: Li, F.
journal: Mol Ecol Resour (2020) In press
pubmed: 32780934
comments: Publication Status: Available-Online prior to print

32780934
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45945927:1
position: 45945927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-45945927:1:source
so part of: sequence
organism: Nilaparvata lugens
mol type: genomic DNA
isolate: BPH
host: rice
chromosome: 11
tissue type: whole body
country: China: Wuhan
collection date: 15-Jun-2018

108931
type: Taxonomy
SIO_000068: taxonomy

LOC120353620
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353620
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<5020..26282)
location: region:5020-26282:-1
so has part: feature:5020-26282:-1:exon
subclass of: SO_0000010

120353620
type: Gene
SIO_000068: ncbigene

position:5020:-1
position: 5020
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:26282:-1
position: 26282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5020-26282:-1:exon

LOC120353620
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353620
product: bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039438156.1
SIO_010081: LOC120353620
subclass of: SO_0000673
so part of: LOC120353620
location: complement(join(<5020..5206,7058..7178,10420..10562,20579..20682,23143..23353,24989..25238,26228..26282))
location: region:5020-26282:-1
so has part: feature:26228-26282:-1:exon
so has part: feature:24989-25238:-1:exon
so has part: feature:23143-23353:-1:exon
so has part: feature:20579-20682:-1:exon
so has part: feature:10420-10562:-1:exon
so has part: feature:7058-7178:-1:exon
so has part: feature:5020-5206:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26228-26282:-1:exon

position:26228:-1
position: 26228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:24989-25238:-1:exon

position:24989:-1
position: 24989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25238:-1
position: 25238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:23143-23353:-1:exon

position:23143:-1
position: 23143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23353:-1
position: 23353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:20579-20682:-1:exon

position:20579:-1
position: 20579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20682:-1
position: 20682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10420-10562:-1:exon

position:10420:-1
position: 10420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10562:-1
position: 10562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7058-7178:-1:exon

position:7058:-1
position: 7058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7178:-1
position: 7178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5020-5206:-1:exon

position:5206:-1
position: 5206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120353620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353620
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66-like
translation: MFGRHLLHKRRSGNTYPEGRALPHIVWDLYRNGCSVRFLNPQAFIPDIHRINSELQEKLGFVGCNLYLTPAGSQGFAPHYDDIEAFVLQIEGSKHWKVYAPLSEAETLPRYSSKNLSESDLGPPIIDCVLNPGDLLFFPRGFVHQAKTTDEHSLHITLSAYQCTAYIDMFEKVIPNVLKEAASKSVKLREGLPLNYAQTFGITRNSKYSDARSIYKQKLKEMLHDLVENMDYDAAVDEFAAVKLHDDLPLYLTDGVKKCTVFGNRNTIDPDGKVSKVVQLQLDSKVSLLQLNICRLVKEDERYLLYHSMSNSLEYHERDREFLEVPEDNIEAVRRLFHSYPNYVKVADLPIDDDEAK
SIO_010081: LOC120353620
subclass of: SO_0000673
so part of: LOC120353620
location: complement(join(<5020..5206,7058..7178,10420..10562,20579..20682,23143..23353,24989..25238,26228..26282))
location: region:5020-26282:-1
so has part: feature:26228-26282:-1:exon
so has part: feature:24989-25238:-1:exon
so has part: feature:23143-23353:-1:exon
so has part: feature:20579-20682:-1:exon
so has part: feature:10420-10562:-1:exon
so has part: feature:7058-7178:-1:exon
so has part: feature:5020-5206:-1:exon

XP_039294090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26228-26282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24989-25238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:23143-23353:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:20579-20682:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10420-10562:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7058-7178:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5020-5206:-1:exon

LOC120353621
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353621
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(26306..29447)
location: region:26306-29447:-1
so has part: feature:26306-29447:-1:exon
subclass of: SO_0000010

120353621
type: Gene
SIO_000068: ncbigene

position:26306:-1
position: 26306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29447:-1
position: 29447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26306-29447:-1:exon

LOC120353621
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353621
product: uncharacterized LOC120353621
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 82% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_039438157.1
SIO_010081: LOC120353621
subclass of: SO_0000673
so part of: LOC120353621
location: complement(join(26306..26405,29101..29447))
location: region:26306-29447:-1
so has part: feature:29101-29447:-1:exon
so has part: feature:26306-26405:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29101-29447:-1:exon

position:29101:-1
position: 29101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26306-26405:-1:exon

position:26405:-1
position: 26405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120353621
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353621
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120353621
translation: MCEVSKCTECEARYTQSDNQSHPSEAVSTLDQKTSSKKSPNSKNNSNDQSCNQKRCEKNLGDLRIDIVKDKATNVGDGKNLQWLLQPYSVKDFFRGYWEINRLINAIRRRHYSSAFNLTTATVDQIF
SIO_010081: LOC120353621
subclass of: SO_0000673
so part of: LOC120353621
location: complement(join(26306..26405,29101..29384))
location: region:26306-29384:-1
so has part: feature:29101-29384:-1:exon
so has part: feature:26306-26405:-1:exon

XP_039294091.1
type: Protein
SIO_000068: ncbiprotein

position:29384:-1
position: 29384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29101-29384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26306-26405:-1:exon

LOC120353499
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353499
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 39876..99057
location: region:39876-99057:1
so has part: feature:39876-99057:1:exon
subclass of: SO_0000010

120353499
type: Gene
SIO_000068: ncbigene

position:39876:1
position: 39876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99057:1
position: 99057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39876-99057:1:exon

LOC120353499
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353499
product: bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_039437347.1
SIO_010081: LOC120353499
subclass of: SO_0000673
so part of: LOC120353499
location: join(39876..40019,43260..43380,95432..95618,98628..99057)
location: region:39876-99057:1
so has part: feature:39876-40019:1:exon
so has part: feature:43260-43380:1:exon
so has part: feature:95432-95618:1:exon
so has part: feature:98628-99057:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39876-40019:1:exon

position:40019:1
position: 40019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:43260-43380:1:exon

position:43260:1
position: 43260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43380:1
position: 43380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:95432-95618:1:exon

position:95432:1
position: 95432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95618:1
position: 95618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:98628-99057:1:exon

position:98628:1
position: 98628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120353499
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353499
product: bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_039437348.1
SIO_010081: LOC120353499
subclass of: SO_0000673
so part of: LOC120353499
location: join(39876..40019,91422..91542,95432..95618,98628..99057)
location: region:39876-99057:1
so has part: feature:39876-40019:1:exon
so has part: feature:91422-91542:1:exon
so has part: feature:95432-95618:1:exon
so has part: feature:98628-99057:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39876-40019:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91422-91542:1:exon

position:91422:1
position: 91422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91542:1
position: 91542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:95432-95618:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98628-99057:1:exon

LOC120353499
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353499
product: bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_039437346.1
SIO_010081: LOC120353499
subclass of: SO_0000673
so part of: LOC120353499
location: join(39876..40019,43260..43380,45233..45419,63761..64036)
location: region:39876-64036:1
so has part: feature:39876-40019:1:exon
so has part: feature:43260-43380:1:exon
so has part: feature:45233-45419:1:exon
so has part: feature:63761-64036:1:exon

position:64036:1
position: 64036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39876-40019:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43260-43380:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45233-45419:1:exon

position:45233:1
position: 45233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45419:1
position: 45419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:63761-64036:1:exon

position:63761:1
position: 63761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120353499
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353499
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66-like isoform X2
translation: MLHDLVENMDYDAAVDEFAAVKLHDDLPLYLTDGVKKCTVFGNRNTIDPDGKVSKVVQLQLDSKVSLLQLNICRLVKEDERYLLYHSMSNSLEYHERDREFLEVPEDNIEAVRRLFHSYPNYLKVADLPIDDDEAKWSFANTLWENGLLKTDKPLLKISPEEMVGDDDDDDED
SIO_010081: LOC120353499
subclass of: SO_0000673
so part of: LOC120353499
location: join(39920..40019,43260..43380,95432..95618,98628..98741)
location: region:39920-98741:1
so has part: feature:39920-40019:1:exon
so has part: feature:43260-43380:1:exon
so has part: feature:95432-95618:1:exon
so has part: feature:98628-98741:1:exon

XP_039293281.1
type: Protein
SIO_000068: ncbiprotein

position:39920:1
position: 39920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98741:1
position: 98741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39920-40019:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43260-43380:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95432-95618:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98628-98741:1:exon

LOC120353499
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353499
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66-like isoform X3
translation: MLHDLVENMDYDAAVDEFAAVKLHDDLPLYLTDGVKKCTVFGNRNTIDPDGKVSKVVQLQLDSKVSLLQLNICRLVKEDERYLLYHSMSNSLEYHERDREFLEVPEDNIEAVRRLFHSYPNYLKVADLPIDDDEAKWSFANTLWENGLLKTDKPLLKISPEEMVGDDDDDDED
SIO_010081: LOC120353499
subclass of: SO_0000673
so part of: LOC120353499
location: join(39920..40019,91422..91542,95432..95618,98628..98741)
location: region:39920-98741:1
so has part: feature:39920-40019:1:exon
so has part: feature:91422-91542:1:exon
so has part: feature:95432-95618:1:exon
so has part: feature:98628-98741:1:exon

XP_039293282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39920-40019:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91422-91542:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95432-95618:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98628-98741:1:exon

LOC120353499
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353499
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66-like isoform X1
translation: MLHDLVENMDYDAAVDEFAAVKLHDDLPLYLTDGVKKCTVFGNRNTIDPDGKVSKVVQLQLDSKVSLLQLNICRLVKEDERYLLYHSMSNSLEYHERDREFLEVPEDNIEAVRRLFHSYPNYVKVADLPIDDDEAKWSFANTLWENGLLKTDKPLLKISPEEMVGDDDDDDDED
SIO_010081: LOC120353499
subclass of: SO_0000673
so part of: LOC120353499
location: join(39920..40019,43260..43380,45233..45419,63761..63877)
location: region:39920-63877:1
so has part: feature:39920-40019:1:exon
so has part: feature:43260-43380:1:exon
so has part: feature:45233-45419:1:exon
so has part: feature:63761-63877:1:exon

XP_039293280.1
type: Protein
SIO_000068: ncbiprotein

position:63877:1
position: 63877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39920-40019:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43260-43380:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45233-45419:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:63761-63877:1:exon

LOC111048804
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111048804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 53484..54653
location: region:53484-54653:1
so has part: feature:53484-54653:1:exon
subclass of: SO_0000010

111048804
type: Gene
SIO_000068: ncbigene

position:53484:1
position: 53484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54653:1
position: 54653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53484-54653:1:exon

LOC111048804
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111048804
product: uncharacterized LOC111048804
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_022334786.2
SIO_010081: LOC111048804
subclass of: SO_0000673
so part of: LOC111048804
location: 53484..54653
location: region:53484-54653:1
so has part: feature:53484-54653:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53484-54653:1:exon

LOC111048804
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111048804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111048804
translation: MSCGMCNKSVRGANNSEVKCIDCNNQFHGNCVSMKVEEIKFLIESGKSWRCDGCTRNKRLSMSMDTPIKEGQITLEKLAQMLTNVSENIKSVEKSLGDSIQSCHESVGDVLEKVKKQESQLKVCLDKIETQSTEIIALKKENEELRRAISDIQQYTRSNCLELHNFPQEENEDLLGVVKSVSKALGHTITDLQIDNCHRLPTREKDKVPPIIIKLTRRIDKEELLKRRRVMRNFSTRHMDLPTDIPLYLNESLSPENRRVLALARAAKKEKDYKYLWIRNGKILMRKSEGQPVISLSSVSDISKL
SIO_010081: LOC111048804
subclass of: SO_0000673
so part of: LOC111048804
location: 53598..54515
location: region:53598-54515:1
so has part: feature:53598-54515:1:exon

XP_022190478.2
type: Protein
SIO_000068: ncbiprotein

position:53598:1
position: 53598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54515:1
position: 54515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53598-54515:1:exon

LOC120353505
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353505
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 66079..67600
location: region:66079-67600:1
so has part: feature:66079-67600:1:exon
subclass of: SO_0000011

120353505
type: Gene
SIO_000068: ncbigene

position:66079:1
position: 66079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67600:1
position: 67600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66079-67600:1:exon

LOC120353505
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC120353505
product: uncharacterized LOC120353505
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_005572425.1
SIO_010081: LOC120353505
subclass of: SO_0000673
so part of: LOC120353505
location: join(66079..66710,67165..67600)
location: region:66079-67600:1
so has part: feature:66079-66710:1:exon
so has part: feature:67165-67600:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66079-66710:1:exon

position:66710:1
position: 66710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:67165-67600:1:exon

position:67165:1
position: 67165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120348894
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120348894
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(103028..131946)
location: region:103028-131946:-1
so has part: feature:103028-131946:-1:exon
subclass of: SO_0000010

120348894
type: Gene
SIO_000068: ncbigene

position:103028:-1
position: 103028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131946:-1
position: 131946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103028-131946:-1:exon

LOC120348894
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120348894
product: multiple coagulation factor deficiency protein 2 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 long SRA reads, 3 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_039437350.1
SIO_010081: LOC120348894
subclass of: SO_0000673
so part of: LOC120348894
location: complement(join(103028..103369,105711..105904,107905..107991,110205..110347,131734..131946))
location: region:103028-131946:-1
so has part: feature:131734-131946:-1:exon
so has part: feature:110205-110347:-1:exon
so has part: feature:107905-107991:-1:exon
so has part: feature:105711-105904:-1:exon
so has part: feature:103028-103369:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:131734-131946:-1:exon

position:131734:-1
position: 131734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:110205-110347:-1:exon

position:110205:-1
position: 110205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110347:-1
position: 110347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:107905-107991:-1:exon

position:107905:-1
position: 107905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107991:-1
position: 107991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:105711-105904:-1:exon

position:105711:-1
position: 105711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105904:-1
position: 105904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:103028-103369:-1:exon

position:103369:-1
position: 103369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120348894
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120348894
product: multiple coagulation factor deficiency protein 2 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 long SRA reads, 3 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_039437351.1
SIO_010081: LOC120348894
subclass of: SO_0000673
so part of: LOC120348894
location: complement(join(103214..103369,105711..105904,107905..107991,110205..110347,131633..131803))
location: region:103214-131803:-1
so has part: feature:131633-131803:-1:exon
so has part: feature:110205-110347:-1:exon
so has part: feature:107905-107991:-1:exon
so has part: feature:105711-105904:-1:exon
so has part: feature:103214-103369:-1:exon

position:103214:-1
position: 103214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131803:-1
position: 131803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131633-131803:-1:exon

position:131633:-1
position: 131633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:110205-110347:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107905-107991:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:105711-105904:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:103214-103369:-1:exon

LOC120348894
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120348894
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multiple coagulation factor deficiency protein 2 homolog
translation: MIICLAVLQCVVAVMSMRGPHHPRGHYHYQPKGNKKLTQDTEALQDVEHIKEDLMNVNPEVDTSKMTPEELEFHYFKLHDFDNNTKLDGLEILHAIHHSTHHDHDDSEENHGDNRHKSSDLKDRVAPDKYQSTDDDMRYFTDLIDQVLAEDDLDNDGYLSYVEYVVGRKKDQDKRNAGLNRR
SIO_010081: LOC120348894
subclass of: SO_0000673
so part of: LOC120348894
location: complement(join(103245..103369,105711..105904,107905..107991,110205..110347))
location: region:103245-110347:-1
so has part: feature:110205-110347:-1:exon
so has part: feature:107905-107991:-1:exon
so has part: feature:105711-105904:-1:exon
so has part: feature:103245-103369:-1:exon

XP_039293284.1
type: Protein
SIO_000068: ncbiprotein

position:103245:-1
position: 103245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110205-110347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107905-107991:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:105711-105904:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:103245-103369:-1:exon

LOC120348894
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120348894
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multiple coagulation factor deficiency protein 2 homolog
translation: MIICLAVLQCVVAVMSMRGPHHPRGHYHYQPKGNKKLTQDTEALQDVEHIKEDLMNVNPEVDTSKMTPEELEFHYFKLHDFDNNTKLDGLEILHAIHHSTHHDHDDSEENHGDNRHKSSDLKDRVAPDKYQSTDDDMRYFTDLIDQVLAEDDLDNDGYLSYVEYVVGRKKDQDKRNAGLNRR
SIO_010081: LOC120348894
subclass of: SO_0000673
so part of: LOC120348894
location: complement(join(103245..103369,105711..105904,107905..107991,110205..110347))
location: region:103245-110347:-1
so has part: feature:110205-110347:-1:exon
so has part: feature:107905-107991:-1:exon
so has part: feature:105711-105904:-1:exon
so has part: feature:103245-103369:-1:exon

XP_039293285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110205-110347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107905-107991:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:105711-105904:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:103245-103369:-1:exon

LOC120353497
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353497
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(163681..166492)
location: region:163681-166492:-1
so has part: feature:163681-166492:-1:exon
subclass of: SO_0000010

120353497
type: Gene
SIO_000068: ncbigene

position:163681:-1
position: 163681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166492:-1
position: 166492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163681-166492:-1:exon

LOC120353497
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353497
product: uncharacterized LOC120353497
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_039437341.1
SIO_010081: LOC120353497
subclass of: SO_0000673
so part of: LOC120353497
location: complement(join(163681..164475,165573..166492))
location: region:163681-166492:-1
so has part: feature:165573-166492:-1:exon
so has part: feature:163681-164475:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:165573-166492:-1:exon

position:165573:-1
position: 165573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:163681-164475:-1:exon

position:164475:-1
position: 164475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120353497
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353497
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120353497
translation: MDKSHRASSSSFLLPDSPPPERELNYWEQQKQQKKQQKSLSSATTSAVASTSGAPSSSASTSDPLKKQGIFVQDEDSSIIVGDSSPPPQATWAPRRAALTSVPAPKQSVKRRLFVDDEEPGVLTQSKIRVQLQESQDSSIMSLLRETEEGEEEDELDRETDDFIRIINSRCEKPWTPLRELEEGLPYPIVDVREASNQHGRRIILKLYTPGMRSTEVYLPERFSEIVSSNDIEKFKKNCTKSCLLVKHVNARWSDIKILSKNC
SIO_010081: LOC120353497
subclass of: SO_0000673
so part of: LOC120353497
location: complement(join(164065..164475,165573..165953))
location: region:164065-165953:-1
so has part: feature:165573-165953:-1:exon
so has part: feature:164065-164475:-1:exon

XP_039293275.1
type: Protein
SIO_000068: ncbiprotein

position:164065:-1
position: 164065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165953:-1
position: 165953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165573-165953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:164065-164475:-1:exon

LOC111047363
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111047363
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <209778..289078
location: region:209778-289078:1
so has part: feature:209778-289078:1:exon
subclass of: SO_0000010

111047363
type: Gene
SIO_000068: ncbigene

position:209778:1
position: 209778
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:289078:1
position: 289078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209778-289078:1:exon

LOC111047363
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111047363
product: paired mesoderm homeobox protein 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039437354.1
SIO_010081: LOC111047363
subclass of: SO_0000673
so part of: LOC111047363
location: join(<209778..210208,221993..222144,225939..226046,266775..266949,268238..268263,271596..271698,273033..273044,287765..289078)
location: region:209778-289078:1
so has part: feature:209778-210208:1:exon
so has part: feature:221993-222144:1:exon
so has part: feature:225939-226046:1:exon
so has part: feature:266775-266949:1:exon
so has part: feature:268238-268263:1:exon
so has part: feature:271596-271698:1:exon
so has part: feature:273033-273044:1:exon
so has part: feature:287765-289078:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:209778-210208:1:exon

position:210208:1
position: 210208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:221993-222144:1:exon

position:221993:1
position: 221993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222144:1
position: 222144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:225939-226046:1:exon

position:225939:1
position: 225939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226046:1
position: 226046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:266775-266949:1:exon

position:266775:1
position: 266775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266949:1
position: 266949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:268238-268263:1:exon

position:268238:1
position: 268238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268263:1
position: 268263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:271596-271698:1:exon

position:271596:1
position: 271596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271698:1
position: 271698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:273033-273044:1:exon

position:273033:1
position: 273033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273044:1
position: 273044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:287765-289078:1:exon

position:287765:1
position: 287765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111047363
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111047363
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: paired mesoderm homeobox protein 1
translation: TLSPDTLWEAGLKLDFKGTSCGTTAGGADGGAETGNAAPPSAATSSAAAEQQFNIFPAIFSRQLNFHQGNHGKLMDELRPNLGLLGLVEGGDHLHHHHHHHHGGEKRTKSEPDFSALYALPGPGGLDSQQHTPSPGRPLTDHAGADGAFKKLKNEPMSGSGGVGGGPSPTVVHTPTTASCPTPARRRHRTTFTQEQLAELEAAFAKSHYPDIYCREELARTTKLNEARIQVWFQNRRAKYRKQEKQLQKALAPSVLPTCNGAMMRNIYPTASRGYQPWARSATAAPPKKWPKKFVFQMTTSSYPSMTQPFSMSHSASNMTAAVTGMRQEAMGVFHRMSAEDEWYNKSLSALRMNSSHHPNLAAPMLQYQT
SIO_010081: LOC111047363
subclass of: SO_0000673
so part of: LOC111047363
location: join(<209778..210208,221993..222144,225939..226046,266775..266949,268238..268263,271596..271698,273033..273044,287765..287871)
location: region:209778-287871:1
so has part: feature:209778-210208:1:exon
so has part: feature:221993-222144:1:exon
so has part: feature:225939-226046:1:exon
so has part: feature:266775-266949:1:exon
so has part: feature:268238-268263:1:exon
so has part: feature:271596-271698:1:exon
so has part: feature:273033-273044:1:exon
so has part: feature:287765-287871:1:exon

XP_039293288.1
type: Protein
SIO_000068: ncbiprotein

position:287871:1
position: 287871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209778-210208:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:221993-222144:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225939-226046:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266775-266949:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:268238-268263:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:271596-271698:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:273033-273044:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:287765-287871:1:exon

LOC111047361
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111047361
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(301512..308016)
location: region:301512-308016:-1
so has part: feature:301512-308016:-1:exon
subclass of: SO_0000010

111047361
type: Gene
SIO_000068: ncbigene

position:301512:-1
position: 301512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308016:-1
position: 308016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301512-308016:-1:exon

LOC111047361
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111047361
product: dnaJ-like protein 60
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 14 long SRA reads, 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_039437344.1
SIO_010081: LOC111047361
subclass of: SO_0000673
so part of: LOC111047361
location: complement(join(301512..301879,303958..304128,305552..305739,306498..306591,307746..308016))
location: region:301512-308016:-1
so has part: feature:307746-308016:-1:exon
so has part: feature:306498-306591:-1:exon
so has part: feature:305552-305739:-1:exon
so has part: feature:303958-304128:-1:exon
so has part: feature:301512-301879:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:307746-308016:-1:exon

position:307746:-1
position: 307746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:306498-306591:-1:exon

position:306498:-1
position: 306498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306591:-1
position: 306591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:305552-305739:-1:exon

position:305552:-1
position: 305552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305739:-1
position: 305739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:303958-304128:-1:exon

position:303958:-1
position: 303958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304128:-1
position: 304128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:301512-301879:-1:exon

position:301879:-1
position: 301879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111047361
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111047361
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ-like protein 60
translation: MCNNSLSTCRLALSRLNFYCRTLQLHTTKQTLSDHYKTLNLKRDCTSKEIRDAYLKLSKEYHPDLHKGDTTKDKKFSDINAAYSVLSKTHTRREYDTATMWKERDVKYYRTEDEKEKEKMWKKTWGNPVFYHNRTDLNYNSKDDEYYGIKGVRRIPNSKLVLYLLSFSFAVGLLQIFLIKISIKFKHNKEMAQSAEIEKEMKYRRDMAESLTDEEYVEQLTAKMQADQVKYGRKMN
SIO_010081: LOC111047361
subclass of: SO_0000673
so part of: LOC111047361
location: complement(join(301708..301879,303958..304128,305552..305739,306498..306591,307746..307831))
location: region:301708-307831:-1
so has part: feature:307746-307831:-1:exon
so has part: feature:306498-306591:-1:exon
so has part: feature:305552-305739:-1:exon
so has part: feature:303958-304128:-1:exon
so has part: feature:301708-301879:-1:exon

XP_039293278.1
type: Protein
SIO_000068: ncbiprotein

position:301708:-1
position: 301708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307831:-1
position: 307831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307746-307831:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:306498-306591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:305552-305739:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:303958-304128:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301708-301879:-1:exon

LOC111047360
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111047360
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 308049..320841
location: region:308049-320841:1
so has part: feature:308049-320841:1:exon
subclass of: SO_0000010

111047360
type: Gene
SIO_000068: ncbigene

position:308049:1
position: 308049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320841:1
position: 320841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308049-320841:1:exon

LOC111047360
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111047360
product: rab-like protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 39 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_039437343.1
SIO_010081: LOC111047360
subclass of: SO_0000673
so part of: LOC111047360
location: join(308049..308416,308586..308795,311519..311670,317614..317727,320593..320841)
location: region:308049-320841:1
so has part: feature:308049-308416:1:exon
so has part: feature:308586-308795:1:exon
so has part: feature:311519-311670:1:exon
so has part: feature:317614-317727:1:exon
so has part: feature:320593-320841:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:308049-308416:1:exon

position:308416:1
position: 308416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:308586-308795:1:exon

position:308586:1
position: 308586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308795:1
position: 308795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:311519-311670:1:exon

position:311519:1
position: 311519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311670:1
position: 311670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:317614-317727:1:exon

position:317614:1
position: 317614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317727:1
position: 317727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:320593-320841:1:exon

position:320593:1
position: 320593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111047360
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111047360
product: rab-like protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 13 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_039437342.1
SIO_010081: LOC111047360
subclass of: SO_0000673
so part of: LOC111047360
location: join(308066..308416,308586..308795,311519..311670,314767..314811,317614..317727,320593..320841)
location: region:308066-320841:1
so has part: feature:308066-308416:1:exon
so has part: feature:308586-308795:1:exon
so has part: feature:311519-311670:1:exon
so has part: feature:314767-314811:1:exon
so has part: feature:317614-317727:1:exon
so has part: feature:320593-320841:1:exon

position:308066:1
position: 308066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308066-308416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308586-308795:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311519-311670:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314767-314811:1:exon

position:314767:1
position: 314767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314811:1
position: 314811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:317614-317727:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320593-320841:1:exon

LOC111047360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111047360
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab-like protein 3 isoform X1
translation: MAAIDKVKVLVLGDSGVGKTSLTHLITQNEPISNPSWTVGCTVEVKLHEYKEGTPQQKTYFIELWDVGGSSNHRNSRCVFHNSVHGVILVHDLCNKKSHQNLPKWLAEVYSRDANAKNRYSDGDEFDPEQFAGSSQCGDFMSFGFNLDEFKTPILVIGTKLDVAEQVRSNNSYRSSSFAEDCGADEITLDCRQKSSLAAGTSSSVKISRFFDKVIEMRYYSREVLSPLAVNSASADKRRTFPTTTVSPKFYHND
SIO_010081: LOC111047360
subclass of: SO_0000673
so part of: LOC111047360
location: join(308371..308416,308586..308795,311519..311670,314767..314811,317614..317727,320593..320790)
location: region:308371-320790:1
so has part: feature:308371-308416:1:exon
so has part: feature:308586-308795:1:exon
so has part: feature:311519-311670:1:exon
so has part: feature:314767-314811:1:exon
so has part: feature:317614-317727:1:exon
so has part: feature:320593-320790:1:exon

XP_039293276.1
type: Protein
SIO_000068: ncbiprotein

position:308371:1
position: 308371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320790:1
position: 320790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308371-308416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308586-308795:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311519-311670:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314767-314811:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:317614-317727:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320593-320790:1:exon

LOC111047360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111047360
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab-like protein 3 isoform X2
translation: MAAIDKVKVLVLGDSGVGKTSLTHLITQNEPISNPSWTVGCTVEVKLHEYKEGTPQQKTYFIELWDVGGSSNHRNSRCVFHNSVHGVILVHDLCNKKSHQNLPKWLAEVYSRDANAKNRYSDGDEFDPEQFAGSSQTPILVIGTKLDVAEQVRSNNSYRSSSFAEDCGADEITLDCRQKSSLAAGTSSSVKISRFFDKVIEMRYYSREVLSPLAVNSASADKRRTFPTTTVSPKFYHND
SIO_010081: LOC111047360
subclass of: SO_0000673
so part of: LOC111047360
location: join(308371..308416,308586..308795,311519..311670,317614..317727,320593..320790)
location: region:308371-320790:1
so has part: feature:308371-308416:1:exon
so has part: feature:308586-308795:1:exon
so has part: feature:311519-311670:1:exon
so has part: feature:317614-317727:1:exon
so has part: feature:320593-320790:1:exon

XP_039293277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308371-308416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308586-308795:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311519-311670:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:317614-317727:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:320593-320790:1:exon

LOC111047366
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111047366
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 323463..381211
location: region:323463-381211:1
so has part: feature:323463-381211:1:exon
subclass of: SO_0000010

111047366
type: Gene
SIO_000068: ncbigene

position:323463:1
position: 323463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381211:1
position: 381211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323463-381211:1:exon

LOC111047366
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111047366
product: titin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 39 long SRA reads, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039438158.1
SIO_010081: LOC111047366
subclass of: SO_0000673
so part of: LOC111047366
location: join(323463..323627,325239..329517,331696..332030,333836..333980,348191..348324,351678..351955,356808..357025,362159..362284,364873..365152,367505..367642,376593..381211)
location: region:323463-381211:1
so has part: feature:323463-323627:1:exon
so has part: feature:325239-329517:1:exon
so has part: feature:331696-332030:1:exon
so has part: feature:333836-333980:1:exon
so has part: feature:348191-348324:1:exon
so has part: feature:351678-351955:1:exon
so has part: feature:356808-357025:1:exon
so has part: feature:362159-362284:1:exon
so has part: feature:364873-365152:1:exon
so has part: feature:367505-367642:1:exon
so has part: feature:376593-381211:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:323463-323627:1:exon

position:323627:1
position: 323627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:325239-329517:1:exon

position:325239:1
position: 325239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329517:1
position: 329517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:331696-332030:1:exon

position:331696:1
position: 331696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332030:1
position: 332030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:333836-333980:1:exon

position:333836:1
position: 333836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333980:1
position: 333980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:348191-348324:1:exon

position:348191:1
position: 348191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348324:1
position: 348324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:351678-351955:1:exon

position:351678:1
position: 351678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351955:1
position: 351955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:356808-357025:1:exon

position:356808:1
position: 356808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357025:1
position: 357025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:362159-362284:1:exon

position:362159:1
position: 362159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362284:1
position: 362284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:364873-365152:1:exon

position:364873:1
position: 364873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365152:1
position: 365152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:367505-367642:1:exon

position:367505:1
position: 367505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367642:1
position: 367642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:376593-381211:1:exon

position:376593:1
position: 376593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111047366
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111047366
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: titin
translation: MDATDSSKDDSSSSQEQPSELSETDSFLLNIVTKDPDKDLKDESNKTTDSPKRVKLIRPEFDKEKLAQKIREIEEREKQKQKLKEQEEAAKIEEKSGESSSVNKTDGDDVKGVEEPETSEVVVESEVVEEDTVLEPVDEESVVSSGKVDETVVTSVEVSTSDPKKHDKIVESCMKTTPADALGKKMDVGNLKADGSGKEKIIESKVSSTADESVMKKLEKEVLEQKKVESETSVPEKVGTSKAEGTEKAEKIASDAKNVSSSNEQQKMVEETGGEKVVGRNIDSAKALGESSKATGAEKKKEDPVIGGVKEKELVGGGNSKGEIRNLEEKLKVEGSESVELQLEQFMTGDESLSNEESPAENTEKAVESVQQSIESVFDELTVEPSKTIQKVGQDKKSKVVSRLKHVDESSNKSDDILLEIEKFIDSSADCENLKDSSSKVGSSVPTSSKRKLDDDVVDDDAKKRCTSATIDSIKTVEKDVDESDKFLSDELSMDVSDSELEATDIDNKNETDDKSSSKDETPKETPPLETILDSIIADEPETADLPEEDLVVSDIPSTALVETKIPESPRRVKLVRPSKPATKTLTKPEVSQKVSQVKPKVVSESKDVSVKPSTEKLHEVQEKEETKKPERDVAPEEPTKQVEEDTKKSDEGGTTIVNVPQTVDEPVEAETKLNDQNKPATDEKIVTSKDVEPDESSVKVEATTTKLPSVEKSTTEKIIPPVVETSSVKPEVKSEKPPVVKAQESMKLPESVEKSVINQPEEEVRSTKEPAKDDSSKTLPLEPSLPQPEVKVIVEKLKDSKSTEPVPISSKIAEKKPDAEGTVSEKCVATSKLVTSGEVDPVEIPAAQVDKSKVTSSEEVASKEPLVLKESAEVREVSKAPENIEATKSTSEKPSPPVESEASRLRRVIRKPRVVLPVVSKQGETVSSTVVEKKEDVSSSLKQRCEVETVVKKASQDSDLVLDMTVDEEEEEDDDEEEEEKDVVSSSETKQLGFKLKIGKSSSTIIPKDDKTTPQSSASSILADKLISQKTTEHTFGSITISATSSKNKTDMKKVEEMLKDTDVTITPLVDRESVQQKLSKITLKIGKDGNPPEIKQTVERESKGSPGVVAAKRKGGDGGGSPSKKKMKDESAVLTTSSGVEIDLHMKKPKLLSSLIAEPPKTSQDPRQVFGGLTPQQFIVLNPQQQQAIIEQMMNSHQQMLAGQIPQQTPQQMMGQLTPQQFLGTPQSFPGSPVTPGGSEPVKKKRGRPRKIPLPEGQGQLPHGQLPQGQLPQGQLLQGQPSQMLQDPQVQALKQQVMSQSQQSSSGTGTSSGSDEYSSGVFPQVPLFDMTESLFDQAHLFPNQVNAMQTAGRPQRSCRGRIKLPSVRSRKPRGSTMAARAAGTGRGRGRGYKRVQQEFTESDNIITLENVKEEMRRQSMEQAQFLASNEAMQTSQDTSTSSPASAADPGLMKSPPEKKPRKRRTEEQERARIEKMKQKREEKKMKTLEKKRKIAEAKAKEKAAVMAAALVEEETRMSAPERKEEEKKKEIKVEEEEEEEVEKKVEVIIIIFYSSNNTVDTVEPSSPFVTPRKEKKIYRCLICREESPLKKLTSPLDHRSWRVLYQAAIVRGHEEIINLTQNLSDSIPTGILYHRNCRSEFTHKKTLAKLTDCPLPEDGHQISHHHQSSPIIKSTGAENVNPNTPKEVRMVEGTITEYEWPLQGGELYMIQEQVSDFLEITSFKRKYPDIFRRTVETEEKAYLRENGLVSEAHCDLGLIAVKSSDILDIMFADFQDKYEEFRKQIRDKQARELSSKHKAAFTSLLQDKRKFENRVLDAKTEAMQAVAAWNSRLNRTRQETRRSVLDLQSCIVHYPRSVGLKRSQSGVNEPPRKVGHYPVVMVAGQFCDNYKRYTPNELKYFPLNTVIYGPMKPNQRFGGGSDGSQSDSDDSSSSDDSSDSSSDSSDADSDASGDESRDSKDATAAAGGAATNGETHCKMCGGDKTRNKQDNPEVLINC…
SIO_010081: LOC111047366
subclass of: SO_0000673
so part of: LOC111047366
location: join(325353..329517,331696..332030,333836..333980,348191..348324,351678..351955,356808..357025,362159..362284,364873..365152,367505..367642,376593..378210)
location: region:325353-378210:1
so has part: feature:325353-329517:1:exon
so has part: feature:331696-332030:1:exon
so has part: feature:333836-333980:1:exon
so has part: feature:348191-348324:1:exon
so has part: feature:351678-351955:1:exon
so has part: feature:356808-357025:1:exon
so has part: feature:362159-362284:1:exon
so has part: feature:364873-365152:1:exon
so has part: feature:367505-367642:1:exon
so has part: feature:376593-378210:1:exon

XP_039294092.1
type: Protein
SIO_000068: ncbiprotein

position:325353:1
position: 325353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378210:1
position: 378210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325353-329517:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331696-332030:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:333836-333980:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:348191-348324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:351678-351955:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:356808-357025:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:362159-362284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:364873-365152:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:367505-367642:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:376593-378210:1:exon

LOC120353500
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 391057..403212
location: region:391057-403212:1
so has part: feature:391057-403212:1:exon
subclass of: SO_0000010

120353500
type: Gene
SIO_000068: ncbigene

position:391057:1
position: 391057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403212:1
position: 403212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391057-403212:1:exon

LOC120353500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353500
product: histone-lysine N-methyltransferase 2C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_039437353.1
SIO_010081: LOC120353500
subclass of: SO_0000673
so part of: LOC120353500
location: join(391057..391109,393540..393660,394425..394483,397460..397572,401777..403212)
location: region:391057-403212:1
so has part: feature:391057-391109:1:exon
so has part: feature:393540-393660:1:exon
so has part: feature:394425-394483:1:exon
so has part: feature:397460-397572:1:exon
so has part: feature:401777-403212:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:391057-391109:1:exon

position:391109:1
position: 391109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:393540-393660:1:exon

position:393540:1
position: 393540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393660:1
position: 393660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:394425-394483:1:exon

position:394425:1
position: 394425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394483:1
position: 394483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:397460-397572:1:exon

position:397460:1
position: 397460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397572:1
position: 397572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:401777-403212:1:exon

position:401777:1
position: 401777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120353500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase 2C-like
translation: MLFCDLCDRGYHIYCVGLRKVPNGRWHCQVCSVCNSCGTTDPGGSDWQHEYKKEKNVKVYLQTLCGSCDRQWRKGYYCQICLRCYTKKPEEEQNLIKCTACDRWMHSECCKSAGGGIIMGNSVLCELCQERAMPKSVQKNRERLGSY
SIO_010081: LOC120353500
subclass of: SO_0000673
so part of: LOC120353500
location: join(391081..391109,393540..393660,394425..394483,397460..397572,401777..401898)
location: region:391081-401898:1
so has part: feature:391081-391109:1:exon
so has part: feature:393540-393660:1:exon
so has part: feature:394425-394483:1:exon
so has part: feature:397460-397572:1:exon
so has part: feature:401777-401898:1:exon

XP_039293287.1
type: Protein
SIO_000068: ncbiprotein

position:391081:1
position: 391081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401898:1
position: 401898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391081-391109:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:393540-393660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:394425-394483:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:397460-397572:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:401777-401898:1:exon

LOC120353496
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353496
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 408609..428569
location: region:408609-428569:1
so has part: feature:408609-428569:1:exon
subclass of: SO_0000010

120353496
type: Gene
SIO_000068: ncbigene

position:408609:1
position: 408609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428569:1
position: 428569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408609-428569:1:exon

LOC120353496
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353496
product: mitochondrial 2-oxodicarboxylate carrier, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 26 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_039437332.1
SIO_010081: LOC120353496
subclass of: SO_0000673
so part of: LOC120353496
location: join(408609..408695,416412..416491,420653..420861,422688..422750,424136..424288,425238..425357,426213..426394,427990..428220)
location: region:408609-428220:1
so has part: feature:408609-408695:1:exon
so has part: feature:416412-416491:1:exon
so has part: feature:420653-420861:1:exon
so has part: feature:422688-422750:1:exon
so has part: feature:424136-424288:1:exon
so has part: feature:425238-425357:1:exon
so has part: feature:426213-426394:1:exon
so has part: feature:427990-428220:1:exon

position:428220:1
position: 428220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408609-408695:1:exon

position:408695:1
position: 408695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:416412-416491:1:exon

position:416412:1
position: 416412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416491:1
position: 416491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:420653-420861:1:exon

position:420653:1
position: 420653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420861:1
position: 420861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:422688-422750:1:exon

position:422688:1
position: 422688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422750:1
position: 422750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:424136-424288:1:exon

position:424136:1
position: 424136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424288:1
position: 424288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:425238-425357:1:exon

position:425238:1
position: 425238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425357:1
position: 425357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:426213-426394:1:exon

position:426213:1
position: 426213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426394:1
position: 426394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:427990-428220:1:exon

position:427990:1
position: 427990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120353496
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353496
product: mitochondrial 2-oxodicarboxylate carrier, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_039437337.1
SIO_010081: LOC120353496
subclass of: SO_0000673
so part of: LOC120353496
location: join(408618..408695,416412..416491,419080..419288,422688..422750,424136..424288,425238..425357,426213..426394,427990..428220)
location: region:408618-428220:1
so has part: feature:408618-408695:1:exon
so has part: feature:416412-416491:1:exon
so has part: feature:419080-419288:1:exon
so has part: feature:422688-422750:1:exon
so has part: feature:424136-424288:1:exon
so has part: feature:425238-425357:1:exon
so has part: feature:426213-426394:1:exon
so has part: feature:427990-428220:1:exon

position:408618:1
position: 408618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408618-408695:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:416412-416491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419080-419288:1:exon

position:419080:1
position: 419080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419288:1
position: 419288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:422688-422750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:424136-424288:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:425238-425357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:426213-426394:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:427990-428220:1:exon

LOC120353496
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353496
product: mitochondrial 2-oxodicarboxylate carrier, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 23 long SRA reads, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_039437331.1
SIO_010081: LOC120353496
subclass of: SO_0000673
so part of: LOC120353496
location: join(408626..408719,416412..416491,420653..420861,422688..422750,424136..424288,425238..425357,426213..426394,427990..428220)
location: region:408626-428220:1
so has part: feature:408626-408719:1:exon
so has part: feature:416412-416491:1:exon
so has part: feature:420653-420861:1:exon
so has part: feature:422688-422750:1:exon
so has part: feature:424136-424288:1:exon
so has part: feature:425238-425357:1:exon
so has part: feature:426213-426394:1:exon
so has part: feature:427990-428220:1:exon

position:408626:1
position: 408626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408626-408719:1:exon

position:408719:1
position: 408719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:416412-416491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420653-420861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422688-422750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:424136-424288:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:425238-425357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:426213-426394:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:427990-428220:1:exon

LOC120353496
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353496
product: mitochondrial 2-oxodicarboxylate carrier, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 21 long SRA reads, 6 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_039437335.1
SIO_010081: LOC120353496
subclass of: SO_0000673
so part of: LOC120353496
location: join(408632..408858,416412..416491,419080..419288,422688..422750,424136..424288,425238..425357,426213..426394,427990..428220)
location: region:408632-428220:1
so has part: feature:408632-408858:1:exon
so has part: feature:416412-416491:1:exon
so has part: feature:419080-419288:1:exon
so has part: feature:422688-422750:1:exon
so has part: feature:424136-424288:1:exon
so has part: feature:425238-425357:1:exon
so has part: feature:426213-426394:1:exon
so has part: feature:427990-428220:1:exon

position:408632:1
position: 408632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408632-408858:1:exon

position:408858:1
position: 408858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:416412-416491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419080-419288:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422688-422750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:424136-424288:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:425238-425357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:426213-426394:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:427990-428220:1:exon

LOC120353496
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353496
product: mitochondrial 2-oxodicarboxylate carrier, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_039437336.1
SIO_010081: LOC120353496
subclass of: SO_0000673
so part of: LOC120353496
location: join(408645..408719,416412..416491,419080..419288,422688..422750,424136..424288,425238..425357,426213..426394,427990..428220)
location: region:408645-428220:1
so has part: feature:408645-408719:1:exon
so has part: feature:416412-416491:1:exon
so has part: feature:419080-419288:1:exon
so has part: feature:422688-422750:1:exon
so has part: feature:424136-424288:1:exon
so has part: feature:425238-425357:1:exon
so has part: feature:426213-426394:1:exon
so has part: feature:427990-428220:1:exon

position:408645:1
position: 408645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408645-408719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:416412-416491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419080-419288:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422688-422750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:424136-424288:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:425238-425357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:426213-426394:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:427990-428220:1:exon

LOC120353496
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353496
product: mitochondrial 2-oxodicarboxylate carrier, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 21 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_039437330.1
SIO_010081: LOC120353496
subclass of: SO_0000673
so part of: LOC120353496
location: join(408668..408695,408831..408858,416412..416491,420653..420861,422688..422750,424136..424288,425238..425357,426213..426394,427990..428569)
location: region:408668-428569:1
so has part: feature:408668-408695:1:exon
so has part: feature:408831-408858:1:exon
so has part: feature:416412-416491:1:exon
so has part: feature:420653-420861:1:exon
so has part: feature:422688-422750:1:exon
so has part: feature:424136-424288:1:exon
so has part: feature:425238-425357:1:exon
so has part: feature:426213-426394:1:exon
so has part: feature:427990-428569:1:exon

position:408668:1
position: 408668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408668-408695:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:408831-408858:1:exon

position:408831:1
position: 408831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:416412-416491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:420653-420861:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422688-422750:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:424136-424288:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:425238-425357:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:426213-426394:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:427990-428569:1:exon

LOC120353496
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353496
product: mitochondrial 2-oxodicarboxylate carrier, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 22 long SRA reads, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_039437334.1
SIO_010081: LOC120353496
subclass of: SO_0000673
so part of: LOC120353496
location: join(416165..416305,416412..416491,420653..420861,422688..422750,424136..424288,425238..425357,426213..426394,427990..428220)
location: region:416165-428220:1
so has part: feature:416165-416305:1:exon
so has part: feature:416412-416491:1:exon
so has part: feature:420653-420861:1:exon
so has part: feature:422688-422750:1:exon
so has part: feature:424136-424288:1:exon
so has part: feature:425238-425357:1:exon
so has part: feature:426213-426394:1:exon
so has part: feature:427990-428220:1:exon

position:416165:1
position: 416165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416165-416305:1:exon

position:416305:1
position: 416305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:416412-416491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420653-420861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422688-422750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:424136-424288:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:425238-425357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:426213-426394:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:427990-428220:1:exon

LOC120353496
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353496
product: mitochondrial 2-oxodicarboxylate carrier, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_039437338.1
SIO_010081: LOC120353496
subclass of: SO_0000673
so part of: LOC120353496
location: join(416168..416259,416412..416491,419080..419288,422688..422750,424136..424288,425238..425357,426213..426394,427990..428220)
location: region:416168-428220:1
so has part: feature:416168-416259:1:exon
so has part: feature:416412-416491:1:exon
so has part: feature:419080-419288:1:exon
so has part: feature:422688-422750:1:exon
so has part: feature:424136-424288:1:exon
so has part: feature:425238-425357:1:exon
so has part: feature:426213-426394:1:exon
so has part: feature:427990-428220:1:exon

position:416168:1
position: 416168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416168-416259:1:exon

position:416259:1
position: 416259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:416412-416491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419080-419288:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422688-422750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:424136-424288:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:425238-425357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:426213-426394:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:427990-428220:1:exon

LOC120353496
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353496
product: mitochondrial 2-oxodicarboxylate carrier, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 22 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_039437333.1
SIO_010081: LOC120353496
subclass of: SO_0000673
so part of: LOC120353496
location: join(416170..416259,416412..416491,420653..420861,422688..422750,424136..424288,425238..425357,426213..426394,427990..428220)
location: region:416170-428220:1
so has part: feature:416170-416259:1:exon
so has part: feature:416412-416491:1:exon
so has part: feature:420653-420861:1:exon
so has part: feature:422688-422750:1:exon
so has part: feature:424136-424288:1:exon
so has part: feature:425238-425357:1:exon
so has part: feature:426213-426394:1:exon
so has part: feature:427990-428220:1:exon

position:416170:1
position: 416170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416170-416259:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:416412-416491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420653-420861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422688-422750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:424136-424288:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:425238-425357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:426213-426394:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:427990-428220:1:exon

LOC120353496
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353496
product: mitochondrial 2-oxodicarboxylate carrier, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_039437339.1
SIO_010081: LOC120353496
subclass of: SO_0000673
so part of: LOC120353496
location: join(416275..416305,416412..416491,419080..419288,422688..422750,424136..424288,425238..425357,426213..426394,427990..428220)
location: region:416275-428220:1
so has part: feature:416275-416305:1:exon
so has part: feature:416412-416491:1:exon
so has part: feature:419080-419288:1:exon
so has part: feature:422688-422750:1:exon
so has part: feature:424136-424288:1:exon
so has part: feature:425238-425357:1:exon
so has part: feature:426213-426394:1:exon
so has part: feature:427990-428220:1:exon

position:416275:1
position: 416275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416275-416305:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:416412-416491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419080-419288:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422688-422750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:424136-424288:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:425238-425357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:426213-426394:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:427990-428220:1:exon

LOC120353496
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353496
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial 2-oxodicarboxylate carrier isoform X2
translation: MHSNSLLKEAAIQILSGGSAGFVEVCIMHPLDVVKTRLQVQSAPAKVNDPNHYKGVFDCMAKMYRNEGYLAFYKGILPPIVAETPKRALKFVTFEQYKKLFLFGASSPTPLTLSMAGFFAGVTEAIFVNPFEVVKVTMQTNHQKAVIAPSTFQVCKQIVNTNGLGGRGLYRGLTATVLRNGVFNSVYFGFFYTITEYLPKLEDPVHEFMKRVSLGFTAGVFGSLANIPFDVAKSRIQGPQPAKGEIKYKSCFKTMHIIYTEEGFRALYKGLVPKVMRLGPGGAILLICYEQVKEFLTEKLE
SIO_010081: LOC120353496
subclass of: SO_0000673
so part of: LOC120353496
location: join(416431..416491,419080..419288,422688..422750,424136..424288,425238..425357,426213..426394,427990..428107)
location: region:416431-428107:1
so has part: feature:416431-416491:1:exon
so has part: feature:419080-419288:1:exon
so has part: feature:422688-422750:1:exon
so has part: feature:424136-424288:1:exon
so has part: feature:425238-425357:1:exon
so has part: feature:426213-426394:1:exon
so has part: feature:427990-428107:1:exon

XP_039293269.1
type: Protein
SIO_000068: ncbiprotein

position:416431:1
position: 416431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428107:1
position: 428107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416431-416491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419080-419288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:422688-422750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424136-424288:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:425238-425357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:426213-426394:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:427990-428107:1:exon

LOC120353496
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353496
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial 2-oxodicarboxylate carrier isoform X2
translation: MHSNSLLKEAAIQILSGGSAGFVEVCIMHPLDVVKTRLQVQSAPAKVNDPNHYKGVFDCMAKMYRNEGYLAFYKGILPPIVAETPKRALKFVTFEQYKKLFLFGASSPTPLTLSMAGFFAGVTEAIFVNPFEVVKVTMQTNHQKAVIAPSTFQVCKQIVNTNGLGGRGLYRGLTATVLRNGVFNSVYFGFFYTITEYLPKLEDPVHEFMKRVSLGFTAGVFGSLANIPFDVAKSRIQGPQPAKGEIKYKSCFKTMHIIYTEEGFRALYKGLVPKVMRLGPGGAILLICYEQVKEFLTEKLE
SIO_010081: LOC120353496
subclass of: SO_0000673
so part of: LOC120353496
location: join(416431..416491,419080..419288,422688..422750,424136..424288,425238..425357,426213..426394,427990..428107)
location: region:416431-428107:1
so has part: feature:416431-416491:1:exon
so has part: feature:419080-419288:1:exon
so has part: feature:422688-422750:1:exon
so has part: feature:424136-424288:1:exon
so has part: feature:425238-425357:1:exon
so has part: feature:426213-426394:1:exon
so has part: feature:427990-428107:1:exon

XP_039293270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416431-416491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419080-419288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:422688-422750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424136-424288:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:425238-425357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:426213-426394:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:427990-428107:1:exon

LOC120353496
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353496
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial 2-oxodicarboxylate carrier isoform X2
translation: MHSNSLLKEAAIQILSGGSAGFVEVCIMHPLDVVKTRLQVQSAPAKVNDPNHYKGVFDCMAKMYRNEGYLAFYKGILPPIVAETPKRALKFVTFEQYKKLFLFGASSPTPLTLSMAGFFAGVTEAIFVNPFEVVKVTMQTNHQKAVIAPSTFQVCKQIVNTNGLGGRGLYRGLTATVLRNGVFNSVYFGFFYTITEYLPKLEDPVHEFMKRVSLGFTAGVFGSLANIPFDVAKSRIQGPQPAKGEIKYKSCFKTMHIIYTEEGFRALYKGLVPKVMRLGPGGAILLICYEQVKEFLTEKLE
SIO_010081: LOC120353496
subclass of: SO_0000673
so part of: LOC120353496
location: join(416431..416491,419080..419288,422688..422750,424136..424288,425238..425357,426213..426394,427990..428107)
location: region:416431-428107:1
so has part: feature:416431-416491:1:exon
so has part: feature:419080-419288:1:exon
so has part: feature:422688-422750:1:exon
so has part: feature:424136-424288:1:exon
so has part: feature:425238-425357:1:exon
so has part: feature:426213-426394:1:exon
so has part: feature:427990-428107:1:exon

XP_039293271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416431-416491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419080-419288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:422688-422750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424136-424288:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:425238-425357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:426213-426394:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:427990-428107:1:exon

LOC120353496
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353496
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial 2-oxodicarboxylate carrier isoform X2
translation: MHSNSLLKEAAIQILSGGSAGFVEVCIMHPLDVVKTRLQVQSAPAKVNDPNHYKGVFDCMAKMYRNEGYLAFYKGILPPIVAETPKRALKFVTFEQYKKLFLFGASSPTPLTLSMAGFFAGVTEAIFVNPFEVVKVTMQTNHQKAVIAPSTFQVCKQIVNTNGLGGRGLYRGLTATVLRNGVFNSVYFGFFYTITEYLPKLEDPVHEFMKRVSLGFTAGVFGSLANIPFDVAKSRIQGPQPAKGEIKYKSCFKTMHIIYTEEGFRALYKGLVPKVMRLGPGGAILLICYEQVKEFLTEKLE
SIO_010081: LOC120353496
subclass of: SO_0000673
so part of: LOC120353496
location: join(416431..416491,419080..419288,422688..422750,424136..424288,425238..425357,426213..426394,427990..428107)
location: region:416431-428107:1
so has part: feature:416431-416491:1:exon
so has part: feature:419080-419288:1:exon
so has part: feature:422688-422750:1:exon
so has part: feature:424136-424288:1:exon
so has part: feature:425238-425357:1:exon
so has part: feature:426213-426394:1:exon
so has part: feature:427990-428107:1:exon

XP_039293272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416431-416491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419080-419288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:422688-422750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424136-424288:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:425238-425357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:426213-426394:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:427990-428107:1:exon

LOC120353496
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353496
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial 2-oxodicarboxylate carrier isoform X2
translation: MHSNSLLKEAAIQILSGGSAGFVEVCIMHPLDVVKTRLQVQSAPAKVNDPNHYKGVFDCMAKMYRNEGYLAFYKGILPPIVAETPKRALKFVTFEQYKKLFLFGASSPTPLTLSMAGFFAGVTEAIFVNPFEVVKVTMQTNHQKAVIAPSTFQVCKQIVNTNGLGGRGLYRGLTATVLRNGVFNSVYFGFFYTITEYLPKLEDPVHEFMKRVSLGFTAGVFGSLANIPFDVAKSRIQGPQPAKGEIKYKSCFKTMHIIYTEEGFRALYKGLVPKVMRLGPGGAILLICYEQVKEFLTEKLE
SIO_010081: LOC120353496
subclass of: SO_0000673
so part of: LOC120353496
location: join(416431..416491,419080..419288,422688..422750,424136..424288,425238..425357,426213..426394,427990..428107)
location: region:416431-428107:1
so has part: feature:416431-416491:1:exon
so has part: feature:419080-419288:1:exon
so has part: feature:422688-422750:1:exon
so has part: feature:424136-424288:1:exon
so has part: feature:425238-425357:1:exon
so has part: feature:426213-426394:1:exon
so has part: feature:427990-428107:1:exon

XP_039293273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416431-416491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419080-419288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:422688-422750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424136-424288:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:425238-425357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:426213-426394:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:427990-428107:1:exon

LOC120353496
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353496
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial 2-oxodicarboxylate carrier isoform X1
translation: MHSNSLLKEAAIQILSGGSAGFVEVCIMHPLDVVKTRLQVQSAPAKVNDPNHYKGVFDCMAKMYRNEGYLAFYKGILPPIVAETPKRALKFVTFEQYKKLFLFGASSPTPLTLSMAGFFAGVTEAIFVNPFEVVKVTMQTNHQKAVIAPSTFQVCKQIVNTNGLGGRGLYRGLTATVLRNGVFNSVYFGFFYTITEYLPKLEDPVHEFMKRVSLGFTAGVFGSLANIPFDVAKSRIQGPQPAKGEIKYKSCFKTMHIIYTEEGFRALYKGLVPKVMRLGPGGAILLICYEQVKEFLTEKLE
SIO_010081: LOC120353496
subclass of: SO_0000673
so part of: LOC120353496
location: join(416431..416491,420653..420861,422688..422750,424136..424288,425238..425357,426213..426394,427990..428107)
location: region:416431-428107:1
so has part: feature:416431-416491:1:exon
so has part: feature:420653-420861:1:exon
so has part: feature:422688-422750:1:exon
so has part: feature:424136-424288:1:exon
so has part: feature:425238-425357:1:exon
so has part: feature:426213-426394:1:exon
so has part: feature:427990-428107:1:exon

XP_039293264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416431-416491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420653-420861:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:422688-422750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424136-424288:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:425238-425357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:426213-426394:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:427990-428107:1:exon

LOC120353496
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353496
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial 2-oxodicarboxylate carrier isoform X1
translation: MHSNSLLKEAAIQILSGGSAGFVEVCIMHPLDVVKTRLQVQSAPAKVNDPNHYKGVFDCMAKMYRNEGYLAFYKGILPPIVAETPKRALKFVTFEQYKKLFLFGASSPTPLTLSMAGFFAGVTEAIFVNPFEVVKVTMQTNHQKAVIAPSTFQVCKQIVNTNGLGGRGLYRGLTATVLRNGVFNSVYFGFFYTITEYLPKLEDPVHEFMKRVSLGFTAGVFGSLANIPFDVAKSRIQGPQPAKGEIKYKSCFKTMHIIYTEEGFRALYKGLVPKVMRLGPGGAILLICYEQVKEFLTEKLE
SIO_010081: LOC120353496
subclass of: SO_0000673
so part of: LOC120353496
location: join(416431..416491,420653..420861,422688..422750,424136..424288,425238..425357,426213..426394,427990..428107)
location: region:416431-428107:1
so has part: feature:416431-416491:1:exon
so has part: feature:420653-420861:1:exon
so has part: feature:422688-422750:1:exon
so has part: feature:424136-424288:1:exon
so has part: feature:425238-425357:1:exon
so has part: feature:426213-426394:1:exon
so has part: feature:427990-428107:1:exon

XP_039293265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416431-416491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420653-420861:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:422688-422750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424136-424288:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:425238-425357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:426213-426394:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:427990-428107:1:exon

LOC120353496
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353496
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial 2-oxodicarboxylate carrier isoform X1
translation: MHSNSLLKEAAIQILSGGSAGFVEVCIMHPLDVVKTRLQVQSAPAKVNDPNHYKGVFDCMAKMYRNEGYLAFYKGILPPIVAETPKRALKFVTFEQYKKLFLFGASSPTPLTLSMAGFFAGVTEAIFVNPFEVVKVTMQTNHQKAVIAPSTFQVCKQIVNTNGLGGRGLYRGLTATVLRNGVFNSVYFGFFYTITEYLPKLEDPVHEFMKRVSLGFTAGVFGSLANIPFDVAKSRIQGPQPAKGEIKYKSCFKTMHIIYTEEGFRALYKGLVPKVMRLGPGGAILLICYEQVKEFLTEKLE
SIO_010081: LOC120353496
subclass of: SO_0000673
so part of: LOC120353496
location: join(416431..416491,420653..420861,422688..422750,424136..424288,425238..425357,426213..426394,427990..428107)
location: region:416431-428107:1
so has part: feature:416431-416491:1:exon
so has part: feature:420653-420861:1:exon
so has part: feature:422688-422750:1:exon
so has part: feature:424136-424288:1:exon
so has part: feature:425238-425357:1:exon
so has part: feature:426213-426394:1:exon
so has part: feature:427990-428107:1:exon

XP_039293266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416431-416491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420653-420861:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:422688-422750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424136-424288:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:425238-425357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:426213-426394:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:427990-428107:1:exon

LOC120353496
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353496
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial 2-oxodicarboxylate carrier isoform X1
translation: MHSNSLLKEAAIQILSGGSAGFVEVCIMHPLDVVKTRLQVQSAPAKVNDPNHYKGVFDCMAKMYRNEGYLAFYKGILPPIVAETPKRALKFVTFEQYKKLFLFGASSPTPLTLSMAGFFAGVTEAIFVNPFEVVKVTMQTNHQKAVIAPSTFQVCKQIVNTNGLGGRGLYRGLTATVLRNGVFNSVYFGFFYTITEYLPKLEDPVHEFMKRVSLGFTAGVFGSLANIPFDVAKSRIQGPQPAKGEIKYKSCFKTMHIIYTEEGFRALYKGLVPKVMRLGPGGAILLICYEQVKEFLTEKLE
SIO_010081: LOC120353496
subclass of: SO_0000673
so part of: LOC120353496
location: join(416431..416491,420653..420861,422688..422750,424136..424288,425238..425357,426213..426394,427990..428107)
location: region:416431-428107:1
so has part: feature:416431-416491:1:exon
so has part: feature:420653-420861:1:exon
so has part: feature:422688-422750:1:exon
so has part: feature:424136-424288:1:exon
so has part: feature:425238-425357:1:exon
so has part: feature:426213-426394:1:exon
so has part: feature:427990-428107:1:exon

XP_039293267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416431-416491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420653-420861:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:422688-422750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424136-424288:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:425238-425357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:426213-426394:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:427990-428107:1:exon

LOC120353496
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353496
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial 2-oxodicarboxylate carrier isoform X1
translation: MHSNSLLKEAAIQILSGGSAGFVEVCIMHPLDVVKTRLQVQSAPAKVNDPNHYKGVFDCMAKMYRNEGYLAFYKGILPPIVAETPKRALKFVTFEQYKKLFLFGASSPTPLTLSMAGFFAGVTEAIFVNPFEVVKVTMQTNHQKAVIAPSTFQVCKQIVNTNGLGGRGLYRGLTATVLRNGVFNSVYFGFFYTITEYLPKLEDPVHEFMKRVSLGFTAGVFGSLANIPFDVAKSRIQGPQPAKGEIKYKSCFKTMHIIYTEEGFRALYKGLVPKVMRLGPGGAILLICYEQVKEFLTEKLE
SIO_010081: LOC120353496
subclass of: SO_0000673
so part of: LOC120353496
location: join(416431..416491,420653..420861,422688..422750,424136..424288,425238..425357,426213..426394,427990..428107)
location: region:416431-428107:1
so has part: feature:416431-416491:1:exon
so has part: feature:420653-420861:1:exon
so has part: feature:422688-422750:1:exon
so has part: feature:424136-424288:1:exon
so has part: feature:425238-425357:1:exon
so has part: feature:426213-426394:1:exon
so has part: feature:427990-428107:1:exon

XP_039293268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416431-416491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420653-420861:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:422688-422750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424136-424288:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:425238-425357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:426213-426394:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:427990-428107:1:exon

LOC111061382
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111061382
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 431928..444320
location: region:431928-444320:1
so has part: feature:431928-444320:1:exon
subclass of: SO_0000010

111061382
type: Gene
SIO_000068: ncbigene

position:431928:1
position: 431928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444320:1
position: 444320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431928-444320:1:exon

LOC111061382
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111061382
product: calcineurin subunit B type 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 long SRA reads, 25 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039437355.1
SIO_010081: LOC111061382
subclass of: SO_0000673
so part of: LOC111061382
location: join(431928..432041,433511..433550,437203..437453,441026..441148,443319..444320)
location: region:431928-444320:1
so has part: feature:431928-432041:1:exon
so has part: feature:433511-433550:1:exon
so has part: feature:437203-437453:1:exon
so has part: feature:441026-441148:1:exon
so has part: feature:443319-444320:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:431928-432041:1:exon

position:432041:1
position: 432041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:433511-433550:1:exon

position:433511:1
position: 433511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433550:1
position: 433550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:437203-437453:1:exon

position:437203:1
position: 437203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437453:1
position: 437453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:441026-441148:1:exon

position:441026:1
position: 441026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441148:1
position: 441148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:443319-444320:1:exon

position:443319:1
position: 443319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111061382
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111061382
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcineurin subunit B type 2
translation: MGNESSLPMELCSNFDADEIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDEDGNGEVDFKGQYSIDIYSVDISRYITAIYRYMYNVLKMMVGNNLKDTQLQQIVDKTILFADKDEDGKINFEEFCSVVGNTDIHKKMVVDV
SIO_010081: LOC111061382
subclass of: SO_0000673
so part of: LOC111061382
location: join(432039..432041,433511..433550,437203..437453,441026..441148,443319..443366)
location: region:432039-443366:1
so has part: feature:432039-432041:1:exon
so has part: feature:433511-433550:1:exon
so has part: feature:437203-437453:1:exon
so has part: feature:441026-441148:1:exon
so has part: feature:443319-443366:1:exon

XP_039293289.1
type: Protein
SIO_000068: ncbiprotein

position:432039:1
position: 432039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443366:1
position: 443366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432039-432041:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433511-433550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:437203-437453:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:441026-441148:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:443319-443366:1:exon

LOC120353503
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353503
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(458583..473926)
location: region:458583-473926:-1
so has part: feature:458583-473926:-1:exon
subclass of: SO_0000011

120353503
type: Gene
SIO_000068: ncbigene

position:458583:-1
position: 458583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473926:-1
position: 473926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458583-473926:-1:exon

LOC120353503
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC120353503
product: uncharacterized LOC120353503
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XR_005572423.1
SIO_010081: LOC120353503
subclass of: SO_0000673
so part of: LOC120353503
location: complement(join(458583..458664,467925..467989,473784..473926))
location: region:458583-473926:-1
so has part: feature:473784-473926:-1:exon
so has part: feature:467925-467989:-1:exon
so has part: feature:458583-458664:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:473784-473926:-1:exon

position:473784:-1
position: 473784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:467925-467989:-1:exon

position:467925:-1
position: 467925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467989:-1
position: 467989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:458583-458664:-1:exon

position:458664:-1
position: 458664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120348895
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120348895
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <476329..480191
location: region:476329-480191:1
so has part: feature:476329-480191:1:exon
subclass of: SO_0000010

120348895
type: Gene
SIO_000068: ncbigene

position:476329:1
position: 476329
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:480191:1
position: 480191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476329-480191:1:exon

LOC120348895
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120348895
product: calcineurin subunit B type 2
inference: similar to RNA sequence (same species):INSD:GGNH01013502.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 452 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_039437352.1
SIO_010081: LOC120348895
subclass of: SO_0000673
so part of: LOC120348895
location: join(<476329..476406,479110..480191)
location: region:476329-480191:1
so has part: feature:476329-476406:1:exon
so has part: feature:479110-480191:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:476329-476406:1:exon

position:476406:1
position: 476406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:479110-480191:1:exon

position:479110:1
position: 479110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120348895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120348895
inference: similar to RNA sequence (same species):INSD:GGNH01013502.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 387 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcineurin subunit B type 2
translation: MGNESSLPMELCSNFDADEIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDEDGNGEVDFKEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDTQLQQIVDKTILFADKDEDGKINFEEFCSVVGNTDIHKKMVVDV
SIO_010081: LOC120348895
subclass of: SO_0000673
so part of: LOC120348895
location: join(<476329..476406,479110..479157)
location: region:476329-479157:1
so has part: feature:476329-476406:1:exon
so has part: feature:479110-479157:1:exon

XP_039293286.1
type: Protein
SIO_000068: ncbiprotein

position:479157:1
position: 479157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476329-476406:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:479110-479157:1:exon

LOC120353502
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(487851..505295)
location: region:487851-505295:-1
so has part: feature:487851-505295:-1:exon
subclass of: SO_0000011

120353502
type: Gene
SIO_000068: ncbigene

position:487851:-1
position: 487851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505295:-1
position: 505295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487851-505295:-1:exon

LOC120353502
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC120353502
product: uncharacterized LOC120353502
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XR_005572422.1
SIO_010081: LOC120353502
subclass of: SO_0000673
so part of: LOC120353502
location: complement(join(487851..488882,499273..499337,505153..505295))
location: region:487851-505295:-1
so has part: feature:505153-505295:-1:exon
so has part: feature:499273-499337:-1:exon
so has part: feature:487851-488882:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:505153-505295:-1:exon

position:505153:-1
position: 505153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:499273-499337:-1:exon

position:499273:-1
position: 499273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499337:-1
position: 499337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:487851-488882:-1:exon

position:488882:-1
position: 488882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120353504
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353504
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(495989..499017)
location: region:495989-499017:-1
so has part: feature:495989-499017:-1:exon
subclass of: SO_0000011

120353504
type: Gene
SIO_000068: ncbigene

position:495989:-1
position: 495989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499017:-1
position: 499017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495989-499017:-1:exon

LOC120353504
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC120353504
product: uncharacterized LOC120353504
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005572424.1
SIO_010081: LOC120353504
subclass of: SO_0000673
so part of: LOC120353504
location: complement(join(495989..496046,497227..497345,498648..499017))
location: region:495989-499017:-1
so has part: feature:498648-499017:-1:exon
so has part: feature:497227-497345:-1:exon
so has part: feature:495989-496046:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:498648-499017:-1:exon

position:498648:-1
position: 498648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:497227-497345:-1:exon

position:497227:-1
position: 497227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497345:-1
position: 497345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:495989-496046:-1:exon

position:496046:-1
position: 496046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120353498
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353498
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 527585..534783
location: region:527585-534783:1
so has part: feature:527585-534783:1:exon
subclass of: SO_0000010

120353498
type: Gene
SIO_000068: ncbigene

position:527585:1
position: 527585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534783:1
position: 534783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527585-534783:1:exon

LOC120353498
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353498
product: multiple coagulation factor deficiency protein 2 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_039437345.1
SIO_010081: LOC120353498
subclass of: SO_0000673
so part of: LOC120353498
location: join(527585..527759,529995..530081,532084..532277,534632..534783)
location: region:527585-534783:1
so has part: feature:527585-527759:1:exon
so has part: feature:529995-530081:1:exon
so has part: feature:532084-532277:1:exon
so has part: feature:534632-534783:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:527585-527759:1:exon

position:527759:1
position: 527759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:529995-530081:1:exon

position:529995:1
position: 529995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530081:1
position: 530081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:532084-532277:1:exon

position:532084:1
position: 532084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532277:1
position: 532277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:534632-534783:1:exon

position:534632:1
position: 534632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120353498
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353498
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multiple coagulation factor deficiency protein 2 homolog
translation: MIICLAVLQCVVAVMSMRGPHHPRGHYHYQPKGNKKLTQDTEALQDVEHIKEDLMNVNPEVDTSKMTPEELEFHYFKLHDFDNNTKLDGLEILHAIHHSTHHDHDDSEENHGDNRHKSSDLKDRVAPDKYQSTDDDMRYFTDLIDQVLAEDDLDNDGYLSYVEYVVGRKKDQDKRNAGLNRR
SIO_010081: LOC120353498
subclass of: SO_0000673
so part of: LOC120353498
location: join(527617..527759,529995..530081,532084..532277,534632..534756)
location: region:527617-534756:1
so has part: feature:527617-527759:1:exon
so has part: feature:529995-530081:1:exon
so has part: feature:532084-532277:1:exon
so has part: feature:534632-534756:1:exon

XP_039293279.1
type: Protein
SIO_000068: ncbiprotein

position:527617:1
position: 527617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534756:1
position: 534756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527617-527759:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:529995-530081:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532084-532277:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:534632-534756:1:exon

LOC111061999
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111061999
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(537771..573528)
location: region:537771-573528:-1
so has part: feature:537771-573528:-1:exon
subclass of: SO_0000010

111061999
type: Gene
SIO_000068: ncbigene

position:537771:-1
position: 537771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573528:-1
position: 573528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537771-573528:-1:exon

LOC111061999
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111061999
product: bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 28 long SRA reads, 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_039437328.1
SIO_010081: LOC111061999
subclass of: SO_0000673
so part of: LOC111061999
location: complement(join(537771..539343,541788..541974,545870..545990,549782..549924,553040..553143,554266..554476,558736..558985,559965..560146,566068..566703,573368..573528))
location: region:537771-573528:-1
so has part: feature:573368-573528:-1:exon
so has part: feature:566068-566703:-1:exon
so has part: feature:559965-560146:-1:exon
so has part: feature:558736-558985:-1:exon
so has part: feature:554266-554476:-1:exon
so has part: feature:553040-553143:-1:exon
so has part: feature:549782-549924:-1:exon
so has part: feature:545870-545990:-1:exon
so has part: feature:541788-541974:-1:exon
so has part: feature:537771-539343:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:573368-573528:-1:exon

position:573368:-1
position: 573368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:566068-566703:-1:exon

position:566068:-1
position: 566068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566703:-1
position: 566703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:559965-560146:-1:exon

position:559965:-1
position: 559965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560146:-1
position: 560146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:558736-558985:-1:exon

position:558736:-1
position: 558736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558985:-1
position: 558985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:554266-554476:-1:exon

position:554266:-1
position: 554266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554476:-1
position: 554476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:553040-553143:-1:exon

position:553040:-1
position: 553040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553143:-1
position: 553143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:549782-549924:-1:exon

position:549782:-1
position: 549782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549924:-1
position: 549924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:545870-545990:-1:exon

position:545870:-1
position: 545870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545990:-1
position: 545990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:541788-541974:-1:exon

position:541788:-1
position: 541788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541974:-1
position: 541974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:537771-539343:-1:exon

position:539343:-1
position: 539343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111061999
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111061999
product: bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 12 long SRA reads, 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_039437329.1
SIO_010081: LOC111061999
subclass of: SO_0000673
so part of: LOC111061999
location: complement(join(537771..539343,541788..541974,545870..545990,549782..549924,553040..553143,554266..554476,558736..558985,559965..560146,566068..566703,573364..573507))
location: region:537771-573507:-1
so has part: feature:573364-573507:-1:exon
so has part: feature:566068-566703:-1:exon
so has part: feature:559965-560146:-1:exon
so has part: feature:558736-558985:-1:exon
so has part: feature:554266-554476:-1:exon
so has part: feature:553040-553143:-1:exon
so has part: feature:549782-549924:-1:exon
so has part: feature:545870-545990:-1:exon
so has part: feature:541788-541974:-1:exon
so has part: feature:537771-539343:-1:exon

position:573507:-1
position: 573507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573364-573507:-1:exon

position:573364:-1
position: 573364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:566068-566703:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559965-560146:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:558736-558985:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:554266-554476:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:553040-553143:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:549782-549924:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:545870-545990:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:541788-541974:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:537771-539343:-1:exon

LOC111061999
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111061999
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66
translation: MCEVSKCTECEARYTQSDNQSHPSEAVSTLDQKTSSKKSPNSKNNSNDQSCNQKRCEKNLGDLRIDIVKDKATNVGDGKNLQWLLQPYSVKDFFRGYWEIKPLLIKRNSPQHYSSAFNLTTATVDQILADNAIFFTKHVDVTSYTNGVRETHNPEGRALPHIVWDLYRNGCSVRFLNPQAFIPDIHRINSELQEKLGFVGCNLYLTPAGSQGFAPHYDDIEAFVLQIEGSKHWKVYAPLSEAETLPRYSSKNLSESDLGPPIIDCVLNPGDLLFFPRGFVHQAKTTEEHSLHITLSAYQCTAYIDMFEKVIPNVLKEAASKSVKLREGLPLNYAQTFGITRNSKYSDARSIYKQKLKDMLHDLVENMDYDAAVDEFAAVKLHDDLPLYLTDGVKKCTVFGNRNTIDPDGKVSKVVQLQLDSKVSLLQLNICRLVKEDERYLLYHSMSNSLEYHERDREFLEVPEDNIEAVRRLFHSYPNYLKVADLPIDDDEAKWSFANTLWENGLLKTDKPLLKISPEEMVGDDDDDDED
SIO_010081: LOC111061999
subclass of: SO_0000673
so part of: LOC111061999
location: complement(join(539230..539343,541788..541974,545870..545990,549782..549924,553040..553143,554266..554476,558736..558985,559965..560146,566068..566351))
location: region:539230-566351:-1
so has part: feature:566068-566351:-1:exon
so has part: feature:559965-560146:-1:exon
so has part: feature:558736-558985:-1:exon
so has part: feature:554266-554476:-1:exon
so has part: feature:553040-553143:-1:exon
so has part: feature:549782-549924:-1:exon
so has part: feature:545870-545990:-1:exon
so has part: feature:541788-541974:-1:exon
so has part: feature:539230-539343:-1:exon

XP_039293262.1
type: Protein
SIO_000068: ncbiprotein

position:539230:-1
position: 539230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566351:-1
position: 566351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566068-566351:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559965-560146:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:558736-558985:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:554266-554476:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:553040-553143:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:549782-549924:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:545870-545990:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:541788-541974:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:539230-539343:-1:exon

LOC111061999
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111061999
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66
translation: MCEVSKCTECEARYTQSDNQSHPSEAVSTLDQKTSSKKSPNSKNNSNDQSCNQKRCEKNLGDLRIDIVKDKATNVGDGKNLQWLLQPYSVKDFFRGYWEIKPLLIKRNSPQHYSSAFNLTTATVDQILADNAIFFTKHVDVTSYTNGVRETHNPEGRALPHIVWDLYRNGCSVRFLNPQAFIPDIHRINSELQEKLGFVGCNLYLTPAGSQGFAPHYDDIEAFVLQIEGSKHWKVYAPLSEAETLPRYSSKNLSESDLGPPIIDCVLNPGDLLFFPRGFVHQAKTTEEHSLHITLSAYQCTAYIDMFEKVIPNVLKEAASKSVKLREGLPLNYAQTFGITRNSKYSDARSIYKQKLKDMLHDLVENMDYDAAVDEFAAVKLHDDLPLYLTDGVKKCTVFGNRNTIDPDGKVSKVVQLQLDSKVSLLQLNICRLVKEDERYLLYHSMSNSLEYHERDREFLEVPEDNIEAVRRLFHSYPNYLKVADLPIDDDEAKWSFANTLWENGLLKTDKPLLKISPEEMVGDDDDDDED
SIO_010081: LOC111061999
subclass of: SO_0000673
so part of: LOC111061999
location: complement(join(539230..539343,541788..541974,545870..545990,549782..549924,553040..553143,554266..554476,558736..558985,559965..560146,566068..566351))
location: region:539230-566351:-1
so has part: feature:566068-566351:-1:exon
so has part: feature:559965-560146:-1:exon
so has part: feature:558736-558985:-1:exon
so has part: feature:554266-554476:-1:exon
so has part: feature:553040-553143:-1:exon
so has part: feature:549782-549924:-1:exon
so has part: feature:545870-545990:-1:exon
so has part: feature:541788-541974:-1:exon
so has part: feature:539230-539343:-1:exon

XP_039293263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:566068-566351:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559965-560146:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:558736-558985:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:554266-554476:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:553040-553143:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:549782-549924:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:545870-545990:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:541788-541974:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:539230-539343:-1:exon

LOC120353506
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353506
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 574792..582078
location: region:574792-582078:1
so has part: feature:574792-582078:1:exon
subclass of: SO_0000010

120353506
type: Gene
SIO_000068: ncbigene

position:574792:1
position: 574792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582078:1
position: 582078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574792-582078:1:exon

LOC120353506
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353506
product: uncharacterized LOC120353506
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 130 long SRA reads, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_039437357.1
SIO_010081: LOC120353506
subclass of: SO_0000673
so part of: LOC120353506
location: join(574792..575066,577354..577581,579721..579876,582006..582078)
location: region:574792-582078:1
so has part: feature:574792-575066:1:exon
so has part: feature:577354-577581:1:exon
so has part: feature:579721-579876:1:exon
so has part: feature:582006-582078:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:574792-575066:1:exon

position:575066:1
position: 575066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:577354-577581:1:exon

position:577354:1
position: 577354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577581:1
position: 577581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:579721-579876:1:exon

position:579721:1
position: 579721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579876:1
position: 579876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:582006-582078:1:exon

position:582006:1
position: 582006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120353506
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353506
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120353506
translation: MSDDEDDTAPVKFEFSPESKLDEDHLFYLQFTNNFISNVTRPRDFDHCTRWLERLAGEPMYGIEAKRNRNMYLAMLLIAMQDNRVVGPFASFPPAGPLPKANEAFWSNGEARRQRGSSHAPRERQRTQHG
SIO_010081: LOC120353506
subclass of: SO_0000673
so part of: LOC120353506
location: join(574920..575066,577354..577581,579721..579738)
location: region:574920-579738:1
so has part: feature:574920-575066:1:exon
so has part: feature:577354-577581:1:exon
so has part: feature:579721-579738:1:exon

XP_039293291.1
type: Protein
SIO_000068: ncbiprotein

position:574920:1
position: 574920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579738:1
position: 579738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574920-575066:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:577354-577581:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:579721-579738:1:exon

LOC111062000
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111062000
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 585853..587727
location: region:585853-587727:1
so has part: feature:585853-587727:1:exon
subclass of: SO_0000010

111062000
type: Gene
SIO_000068: ncbigene

position:585853:1
position: 585853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587727:1
position: 587727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585853-587727:1:exon

LOC111062000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111062000
product: uncharacterized LOC111062000
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 322 long SRA reads, and 76% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_039437358.1
SIO_010081: LOC111062000
subclass of: SO_0000673
so part of: LOC111062000
location: join(585853..586311,587460..587727)
location: region:585853-587727:1
so has part: feature:585853-586311:1:exon
so has part: feature:587460-587727:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:585853-586311:1:exon

position:586311:1
position: 586311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:587460-587727:1:exon

position:587460:1
position: 587460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111062000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111062000
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111062000
translation: MVEHKHNIEKIQRQRHNKVVTQLYESFRSEVEAGLLAYKEARQEWLEVFTVVDEVRRMLAETNASQTTQVRQSNNQMNMLHSTLVDAKKRQQMCMESSKTLDAHKEELHRGIHDMTIQHKHDLQRMCTTVEALCAEIRRLRTENRRKQQVIDGLCKDIDGDKF
SIO_010081: LOC111062000
subclass of: SO_0000673
so part of: LOC111062000
location: join(586036..586311,587460..587675)
location: region:586036-587675:1
so has part: feature:586036-586311:1:exon
so has part: feature:587460-587675:1:exon

XP_039293292.1
type: Protein
SIO_000068: ncbiprotein

position:586036:1
position: 586036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587675:1
position: 587675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586036-586311:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:587460-587675:1:exon

LOC120353507
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353507
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 588608..595427
location: region:588608-595427:1
so has part: feature:588608-595427:1:exon
subclass of: SO_0000011

120353507
type: Gene
SIO_000068: ncbigene

position:588608:1
position: 588608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595427:1
position: 595427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588608-595427:1:exon

LOC120353507
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC120353507
product: uncharacterized LOC120353507
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 14838 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XR_005572426.1
SIO_010081: LOC120353507
subclass of: SO_0000673
so part of: LOC120353507
location: join(588608..589708,595243..595427)
location: region:588608-595427:1
so has part: feature:588608-589708:1:exon
so has part: feature:595243-595427:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:588608-589708:1:exon

position:589708:1
position: 589708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:595243-595427:1:exon

position:595243:1
position: 595243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111048382
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111048382
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 602603..645852
location: region:602603-645852:1
so has part: feature:602603-645852:1:exon
subclass of: SO_0000010

111048382
type: Gene
SIO_000068: ncbigene

position:602603:1
position: 602603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645852:1
position: 645852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602603-645852:1:exon

LOC111048382
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111048382
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 150 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_039437359.1
SIO_010081: LOC111048382
subclass of: SO_0000673
so part of: LOC111048382
location: join(602603..602738,603435..603498,615689..615904,620950..621122,625152..625313,628137..628327,631158..631305,638570..638789,640266..640483,644054..645852)
location: region:602603-645852:1
so has part: feature:602603-602738:1:exon
so has part: feature:603435-603498:1:exon
so has part: feature:615689-615904:1:exon
so has part: feature:620950-621122:1:exon
so has part: feature:625152-625313:1:exon
so has part: feature:628137-628327:1:exon
so has part: feature:631158-631305:1:exon
so has part: feature:638570-638789:1:exon
so has part: feature:640266-640483:1:exon
so has part: feature:644054-645852:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:602603-602738:1:exon

position:602738:1
position: 602738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:603435-603498:1:exon

position:603435:1
position: 603435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603498:1
position: 603498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:615689-615904:1:exon

position:615689:1
position: 615689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615904:1
position: 615904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:620950-621122:1:exon

position:620950:1
position: 620950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621122:1
position: 621122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:625152-625313:1:exon

position:625152:1
position: 625152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625313:1
position: 625313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:628137-628327:1:exon

position:628137:1
position: 628137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628327:1
position: 628327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:631158-631305:1:exon

position:631158:1
position: 631158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631305:1
position: 631305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:638570-638789:1:exon

position:638570:1
position: 638570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638789:1
position: 638789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:640266-640483:1:exon

position:640266:1
position: 640266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640483:1
position: 640483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:644054-645852:1:exon

position:644054:1
position: 644054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111048382
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111048382
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 136 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_039437361.1
SIO_010081: LOC111048382
subclass of: SO_0000673
so part of: LOC111048382
location: join(602828..602845,603435..603498,615689..615904,620950..621122,625152..625313,628137..628327,631158..631305,638570..638789,640266..640483,644054..645852)
location: region:602828-645852:1
so has part: feature:602828-602845:1:exon
so has part: feature:603435-603498:1:exon
so has part: feature:615689-615904:1:exon
so has part: feature:620950-621122:1:exon
so has part: feature:625152-625313:1:exon
so has part: feature:628137-628327:1:exon
so has part: feature:631158-631305:1:exon
so has part: feature:638570-638789:1:exon
so has part: feature:640266-640483:1:exon
so has part: feature:644054-645852:1:exon

position:602828:1
position: 602828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602828-602845:1:exon

position:602845:1
position: 602845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:603435-603498:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:615689-615904:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620950-621122:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:625152-625313:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:628137-628327:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:631158-631305:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638570-638789:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:640266-640483:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:644054-645852:1:exon

LOC111048382
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111048382
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 153 long SRA reads, 13 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_039437360.1
SIO_010081: LOC111048382
subclass of: SO_0000673
so part of: LOC111048382
location: join(607213..608207,615689..615904,620950..621122,625152..625313,628137..628327,631158..631305,638570..638789,640266..640483,644054..645852)
location: region:607213-645852:1
so has part: feature:607213-608207:1:exon
so has part: feature:615689-615904:1:exon
so has part: feature:620950-621122:1:exon
so has part: feature:625152-625313:1:exon
so has part: feature:628137-628327:1:exon
so has part: feature:631158-631305:1:exon
so has part: feature:638570-638789:1:exon
so has part: feature:640266-640483:1:exon
so has part: feature:644054-645852:1:exon

position:607213:1
position: 607213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607213-608207:1:exon

position:608207:1
position: 608207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:615689-615904:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620950-621122:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625152-625313:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628137-628327:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:631158-631305:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:638570-638789:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:640266-640483:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:644054-645852:1:exon

LOC111048382
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111048382
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma
translation: MLGALKSSPIGRCLAFLMAMNFFLSGLVINAAQCVLYYGLRPFSKHAYRKVNYYLAYSLYSQLVFMAEWWSGTDVHIYIDKDDFDKYYGKEHGYLVMNHRYDVDWLVGWIFCDRIKVLGNCKAYAKKSIQYLPTMGYAWKFAESVFLERNWDKDREAIGTQVRELAQYPDPIWLLLFAEGTRFTEEKHAASLEFARKKGLPELRQHLTPRTKGFTCSVPHLRDKVPAVYDVQLAFKENSETRPTVASMLKGKPLEAHMYIERIPISQVPDDEEEAANWLRDLYLKKDKMMESFLRHGDWFVDSGVRRVEAFKLPRRCYSLLNVVWWGFVLMRPLLYFVVDLLASGSTFSIGVGVTVFLVLYFLLNNLINQTKISKGSSYGKTTPTTPSQSNSFSNLKQD
SIO_010081: LOC111048382
subclass of: SO_0000673
so part of: LOC111048382
location: join(615721..615904,620950..621122,625152..625313,628137..628327,631158..631305,638570..638789,640266..640387)
location: region:615721-640387:1
so has part: feature:615721-615904:1:exon
so has part: feature:620950-621122:1:exon
so has part: feature:625152-625313:1:exon
so has part: feature:628137-628327:1:exon
so has part: feature:631158-631305:1:exon
so has part: feature:638570-638789:1:exon
so has part: feature:640266-640387:1:exon

XP_039293293.1
type: Protein
SIO_000068: ncbiprotein

position:615721:1
position: 615721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640387:1
position: 640387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615721-615904:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:620950-621122:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:625152-625313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:628137-628327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:631158-631305:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638570-638789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:640266-640387:1:exon

LOC111048382
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111048382
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma
translation: MLGALKSSPIGRCLAFLMAMNFFLSGLVINAAQCVLYYGLRPFSKHAYRKVNYYLAYSLYSQLVFMAEWWSGTDVHIYIDKDDFDKYYGKEHGYLVMNHRYDVDWLVGWIFCDRIKVLGNCKAYAKKSIQYLPTMGYAWKFAESVFLERNWDKDREAIGTQVRELAQYPDPIWLLLFAEGTRFTEEKHAASLEFARKKGLPELRQHLTPRTKGFTCSVPHLRDKVPAVYDVQLAFKENSETRPTVASMLKGKPLEAHMYIERIPISQVPDDEEEAANWLRDLYLKKDKMMESFLRHGDWFVDSGVRRVEAFKLPRRCYSLLNVVWWGFVLMRPLLYFVVDLLASGSTFSIGVGVTVFLVLYFLLNNLINQTKISKGSSYGKTTPTTPSQSNSFSNLKQD
SIO_010081: LOC111048382
subclass of: SO_0000673
so part of: LOC111048382
location: join(615721..615904,620950..621122,625152..625313,628137..628327,631158..631305,638570..638789,640266..640387)
location: region:615721-640387:1
so has part: feature:615721-615904:1:exon
so has part: feature:620950-621122:1:exon
so has part: feature:625152-625313:1:exon
so has part: feature:628137-628327:1:exon
so has part: feature:631158-631305:1:exon
so has part: feature:638570-638789:1:exon
so has part: feature:640266-640387:1:exon

XP_039293294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:615721-615904:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:620950-621122:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:625152-625313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:628137-628327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:631158-631305:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638570-638789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:640266-640387:1:exon

LOC111048382
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111048382
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma
translation: MLGALKSSPIGRCLAFLMAMNFFLSGLVINAAQCVLYYGLRPFSKHAYRKVNYYLAYSLYSQLVFMAEWWSGTDVHIYIDKDDFDKYYGKEHGYLVMNHRYDVDWLVGWIFCDRIKVLGNCKAYAKKSIQYLPTMGYAWKFAESVFLERNWDKDREAIGTQVRELAQYPDPIWLLLFAEGTRFTEEKHAASLEFARKKGLPELRQHLTPRTKGFTCSVPHLRDKVPAVYDVQLAFKENSETRPTVASMLKGKPLEAHMYIERIPISQVPDDEEEAANWLRDLYLKKDKMMESFLRHGDWFVDSGVRRVEAFKLPRRCYSLLNVVWWGFVLMRPLLYFVVDLLASGSTFSIGVGVTVFLVLYFLLNNLINQTKISKGSSYGKTTPTTPSQSNSFSNLKQD
SIO_010081: LOC111048382
subclass of: SO_0000673
so part of: LOC111048382
location: join(615721..615904,620950..621122,625152..625313,628137..628327,631158..631305,638570..638789,640266..640387)
location: region:615721-640387:1
so has part: feature:615721-615904:1:exon
so has part: feature:620950-621122:1:exon
so has part: feature:625152-625313:1:exon
so has part: feature:628137-628327:1:exon
so has part: feature:631158-631305:1:exon
so has part: feature:638570-638789:1:exon
so has part: feature:640266-640387:1:exon

XP_039293295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:615721-615904:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:620950-621122:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:625152-625313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:628137-628327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:631158-631305:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638570-638789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:640266-640387:1:exon

LOC120353508
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353508
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 665700..687080
location: region:665700-687080:1
so has part: feature:665700-687080:1:exon
subclass of: SO_0000010

120353508
type: Gene
SIO_000068: ncbigene

position:665700:1
position: 665700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687080:1
position: 687080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:665700-687080:1:exon

LOC120353508
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353508
product: uncharacterized LOC120353508
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_039437363.1
SIO_010081: LOC120353508
subclass of: SO_0000673
so part of: LOC120353508
location: join(665700..665800,666961..667151,668876..669036,672183..672359,674219..674325,685739..687080)
location: region:665700-687080:1
so has part: feature:665700-665800:1:exon
so has part: feature:666961-667151:1:exon
so has part: feature:668876-669036:1:exon
so has part: feature:672183-672359:1:exon
so has part: feature:674219-674325:1:exon
so has part: feature:685739-687080:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:665700-665800:1:exon

position:665800:1
position: 665800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:666961-667151:1:exon

position:666961:1
position: 666961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:667151:1
position: 667151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:668876-669036:1:exon

position:668876:1
position: 668876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669036:1
position: 669036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:672183-672359:1:exon

position:672183:1
position: 672183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672359:1
position: 672359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:674219-674325:1:exon

position:674219:1
position: 674219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674325:1
position: 674325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:685739-687080:1:exon

position:685739:1
position: 685739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120353508
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353508
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120353508
translation: MIDPETRTMMKKTVPRVLGRHDEGGGTTRERVGDQQEETRILSRKGSTSKCLCPWDDDDDEENDEDGLQPGAHCPGYLDGKMKVVTPPNKESETSSEKRPGRPKGSTSKHLWPWDDDAYTEWTLGPQKKRVGQKPSEKRVEGQKG
SIO_010081: LOC120353508
subclass of: SO_0000673
so part of: LOC120353508
location: join(667139..667151,668876..669036,672183..672359,674219..674305)
location: region:667139-674305:1
so has part: feature:667139-667151:1:exon
so has part: feature:668876-669036:1:exon
so has part: feature:672183-672359:1:exon
so has part: feature:674219-674305:1:exon

XP_039293297.1
type: Protein
SIO_000068: ncbiprotein

position:667139:1
position: 667139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674305:1
position: 674305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667139-667151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668876-669036:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:672183-672359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:674219-674305:1:exon

LOC120353509
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353509
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(702732..725296)
location: region:702732-725296:-1
so has part: feature:702732-725296:-1:exon
subclass of: SO_0000010

120353509
type: Gene
SIO_000068: ncbigene

position:702732:-1
position: 702732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725296:-1
position: 725296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:702732-725296:-1:exon

LOC120353509
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353509
product: tetra-peptide repeat homeobox protein 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_039437366.1
SIO_010081: LOC120353509
subclass of: SO_0000673
so part of: LOC120353509
location: complement(join(702732..702854,707534..707623,718160..718579,721490..721653,724646..725295))
location: region:702732-725295:-1
so has part: feature:724646-725295:-1:exon
so has part: feature:721490-721653:-1:exon
so has part: feature:718160-718579:-1:exon
so has part: feature:707534-707623:-1:exon
so has part: feature:702732-702854:-1:exon

position:725295:-1
position: 725295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724646-725295:-1:exon

position:724646:-1
position: 724646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:721490-721653:-1:exon

position:721490:-1
position: 721490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:721653:-1
position: 721653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:718160-718579:-1:exon

position:718160:-1
position: 718160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718579:-1
position: 718579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:707534-707623:-1:exon

position:707534:-1
position: 707534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707623:-1
position: 707623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:702732-702854:-1:exon

position:702854:-1
position: 702854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120353509
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353509
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetra-peptide repeat homeobox protein 1-like isoform X3
translation: MCELFVCLFTVLPGDILYGRIGKLPFLPAVIVPEEGRADETAYHRVKQVNTKTGLVSRHTYRLIWLDGSYRHTWVGRSACAPFAPPPQGEEGRQALEQHINTYRRNRKDRAALRVPRRLEQVCREGVEEAINLSRLPTAARLEAIAAQLTPLPVDDEEWLQVGPDGQAPRPEPRPGPEPMELPEPMELPEPMELPEPMELPEPMELPEPMELPEPMELPEPMELPEPMELPEPMELPEPAAVERTPAPPRPERPATSQSAQSPEPLAEVEQIMHPGRRACVK
SIO_010081: LOC120353509
subclass of: SO_0000673
so part of: LOC120353509
location: complement(join(702822..702854,707534..707623,718160..718579,721490..721653,724646..724787))
location: region:702822-724787:-1
so has part: feature:724646-724787:-1:exon
so has part: feature:721490-721653:-1:exon
so has part: feature:718160-718579:-1:exon
so has part: feature:707534-707623:-1:exon
so has part: feature:702822-702854:-1:exon

XP_039293300.1
type: Protein
SIO_000068: ncbiprotein

position:702822:-1
position: 702822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724787:-1
position: 724787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724646-724787:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:721490-721653:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:718160-718579:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:707534-707623:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:702822-702854:-1:exon

LOC120353509
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353509
product: tetra-peptide repeat homeobox protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_039437365.1
SIO_010081: LOC120353509
subclass of: SO_0000673
so part of: LOC120353509
location: complement(join(706015..706078,707534..707623,718160..718579,721490..721653,724646..725295))
location: region:706015-725295:-1
so has part: feature:724646-725295:-1:exon
so has part: feature:721490-721653:-1:exon
so has part: feature:718160-718579:-1:exon
so has part: feature:707534-707623:-1:exon
so has part: feature:706015-706078:-1:exon

position:706015:-1
position: 706015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724646-725295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:721490-721653:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:718160-718579:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:707534-707623:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:706015-706078:-1:exon

position:706078:-1
position: 706078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120353509
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353509
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetra-peptide repeat homeobox protein 1-like isoform X2
translation: MCELFVCLFTVLPGDILYGRIGKLPFLPAVIVPEEGRADETAYHRVKQVNTKTGLVSRHTYRLIWLDGSYRHTWVGRSACAPFAPPPQGEEGRQALEQHINTYRRNRKDRAALRVPRRLEQVCREGVEEAINLSRLPTAARLEAIAAQLTPLPVDDEEWLQVGPDGQAPRPEPRPGPEPMELPEPMELPEPMELPEPMELPEPMELPEPMELPEPMELPEPMELPEPMELPEPMELPEPAAVERTPAPPRPERPATSQSAQSPEPLAEVEQIMHPGRRACVK
SIO_010081: LOC120353509
subclass of: SO_0000673
so part of: LOC120353509
location: complement(join(706046..706078,707534..707623,718160..718579,721490..721653,724646..724787))
location: region:706046-724787:-1
so has part: feature:724646-724787:-1:exon
so has part: feature:721490-721653:-1:exon
so has part: feature:718160-718579:-1:exon
so has part: feature:707534-707623:-1:exon
so has part: feature:706046-706078:-1:exon

XP_039293299.1
type: Protein
SIO_000068: ncbiprotein

position:706046:-1
position: 706046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724646-724787:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:721490-721653:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:718160-718579:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:707534-707623:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:706046-706078:-1:exon

LOC120353509
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353509
product: tetra-peptide repeat homeobox protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_039437364.1
SIO_010081: LOC120353509
subclass of: SO_0000673
so part of: LOC120353509
location: complement(join(706956..707623,718160..718579,721490..721653,724646..725296))
location: region:706956-725296:-1
so has part: feature:724646-725296:-1:exon
so has part: feature:721490-721653:-1:exon
so has part: feature:718160-718579:-1:exon
so has part: feature:706956-707623:-1:exon

position:706956:-1
position: 706956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724646-725296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:721490-721653:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:718160-718579:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706956-707623:-1:exon

LOC120353509
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353509
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mamJ paralog LimJ-like isoform X1
translation: MCELFVCLFTVLPGDILYGRIGKLPFLPAVIVPEEGRADETAYHRVKQVNTKTGLVSRHTYRLIWLDGSYRHTWVGRSACAPFAPPPQGEEGRQALEQHINTYRRNRKDRAALRVPRRLEQVCREGVEEAINLSRLPTAARLEAIAAQLTPLPVDDEEWLQVGPDGQAPRPEPRPGPEPMELPEPMELPEPMELPEPMELPEPMELPEPMELPEPMELPEPMELPEPMELPEPMELPEPAAVERTPAPPRPERPATSQSAQSPEPLAEVEQIVSEYPLNSLFKIKFNFSIIIVCNNISALPKQISIMVVGEILLLMRCDGTDLWLHSF
SIO_010081: LOC120353509
subclass of: SO_0000673
so part of: LOC120353509
location: complement(join(707363..707623,718160..718579,721490..721653,724646..724787))
location: region:707363-724787:-1
so has part: feature:724646-724787:-1:exon
so has part: feature:721490-721653:-1:exon
so has part: feature:718160-718579:-1:exon
so has part: feature:707363-707623:-1:exon

XP_039293298.1
type: Protein
SIO_000068: ncbiprotein

position:707363:-1
position: 707363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724646-724787:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:721490-721653:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:718160-718579:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:707363-707623:-1:exon

LOC120353509
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353509
product: tetra-peptide repeat homeobox protein 1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_039437367.1
SIO_010081: LOC120353509
subclass of: SO_0000673
so part of: LOC120353509
location: complement(join(713290..713433,718105..718579,721490..721653,724646..725294))
location: region:713290-725294:-1
so has part: feature:724646-725294:-1:exon
so has part: feature:721490-721653:-1:exon
so has part: feature:718105-718579:-1:exon
so has part: feature:713290-713433:-1:exon

position:713290:-1
position: 713290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725294:-1
position: 725294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724646-725294:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:721490-721653:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:718105-718579:-1:exon

position:718105:-1
position: 718105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:713290-713433:-1:exon

position:713433:-1
position: 713433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120353509
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353509
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetra-peptide repeat homeobox protein 1-like isoform X4
translation: MCELFVCLFTVLPGDILYGRIGKLPFLPAVIVPEEGRADETAYHRVKQVNTKTGLVSRHTYRLIWLDGSYRHTWVGRSACAPFAPPPQGEEGRQALEQHINTYRRNRKDRAALRVPRRLEQVCREGVEEAINLSRLPTAARLEAIAAQLTPLPVDDEEWLQVGPDGQAPRPEPRPGPEPMELPEPMELPEPMELPEPMELPEPMELPEPMELPEPMELPEPMELPEPMELPEPMELPEPAAVVSPLQ
SIO_010081: LOC120353509
subclass of: SO_0000673
so part of: LOC120353509
location: complement(join(718142..718579,721490..721653,724646..724787))
location: region:718142-724787:-1
so has part: feature:724646-724787:-1:exon
so has part: feature:721490-721653:-1:exon
so has part: feature:718142-718579:-1:exon

XP_039293301.1
type: Protein
SIO_000068: ncbiprotein

position:718142:-1
position: 718142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724646-724787:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:721490-721653:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:718142-718579:-1:exon

LOC120353510
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353510
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(736698..739470)
location: region:736698-739470:-1
so has part: feature:736698-739470:-1:exon
subclass of: SO_0000010

120353510
type: Gene
SIO_000068: ncbigene

position:736698:-1
position: 736698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739470:-1
position: 739470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:736698-739470:-1:exon

LOC120353510
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353510
product: uncharacterized LOC120353510
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039437368.1
SIO_010081: LOC120353510
subclass of: SO_0000673
so part of: LOC120353510
location: complement(join(736698..737629,738659..739470))
location: region:736698-739470:-1
so has part: feature:738659-739470:-1:exon
so has part: feature:736698-737629:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:738659-739470:-1:exon

position:738659:-1
position: 738659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:736698-737629:-1:exon

position:737629:-1
position: 737629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120353510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353510
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120353510
translation: MMIAAEINNEHTTTFNSFGHNSNKKSGGKPPDLLEPETLEKIAAEMNNEHTTTLNSFGHNSNKKSGGKPPDLSEPETLEKIAAEMNNEHTTTFNSFGHNSNKKSGGKPPDLSEPETLEKIAAEMNNEHTTTFNSFGHNSNKKSGGKPPDLSEPETLEKIAAEMNNEHTTTFNSFGHNSNKKSGGKPPDLSEPETLEKIAAEMNNEHTTTFNSFGHNSNKKSGGKPPDLSEPETLEKIAAEMNNEHTTTFNSFGHDSNKKSGGKPPDLSEPETLEKIAAEMNNEHTTTFNSFGHNSNKKSGGKPPDLSEPETLEKIAAEMNNEHTTTFNSFGHNSNKKSGGKPPDLSEPETLEKIAAEMNNEHTTTFNSFGHNSNKKSGGKPPDLSEPETLEKIAAEMNNEHTTTFNSFGHNSNKKSGGKPPDLSEPETLEKIAAEMNNEHTTTFNSFGHNSNKKSGGKPPDLLEPETLEKIAAEINNFTNADHFTPPHISAPAQPVTLEVKRIHIQASVSLR
SIO_010081: LOC120353510
subclass of: SO_0000673
so part of: LOC120353510
location: complement(join(736723..737629,738659..739290))
location: region:736723-739290:-1
so has part: feature:738659-739290:-1:exon
so has part: feature:736723-737629:-1:exon

XP_039293302.1
type: Protein
SIO_000068: ncbiprotein

position:736723:-1
position: 736723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739290:-1
position: 739290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738659-739290:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:736723-737629:-1:exon

LOC111050644
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111050644
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(794589..891544)
location: region:794589-891544:-1
so has part: feature:794589-891544:-1:exon
subclass of: SO_0000010

111050644
type: Gene
SIO_000068: ncbigene

position:794589:-1
position: 794589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891544:-1
position: 891544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:794589-891544:-1:exon

LOC111050644
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111050644
product: eukaryotic translation initiation factor 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1185 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_039437370.1
SIO_010081: LOC111050644
subclass of: SO_0000673
so part of: LOC111050644
location: complement(join(794589..795034,798989..799177,802530..802667,807071..807190,810985..811182,811967..812091,814168..814473,820850..821420,827686..827803,891153..891289,891398..891544))
location: region:794589-891544:-1
so has part: feature:891398-891544:-1:exon
so has part: feature:891153-891289:-1:exon
so has part: feature:827686-827803:-1:exon
so has part: feature:820850-821420:-1:exon
so has part: feature:814168-814473:-1:exon
so has part: feature:811967-812091:-1:exon
so has part: feature:810985-811182:-1:exon
so has part: feature:807071-807190:-1:exon
so has part: feature:802530-802667:-1:exon
so has part: feature:798989-799177:-1:exon
so has part: feature:794589-795034:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:891398-891544:-1:exon

position:891398:-1
position: 891398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:891153-891289:-1:exon

position:891153:-1
position: 891153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891289:-1
position: 891289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:827686-827803:-1:exon

position:827686:-1
position: 827686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827803:-1
position: 827803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:820850-821420:-1:exon

position:820850:-1
position: 820850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:821420:-1
position: 821420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:814168-814473:-1:exon

position:814168:-1
position: 814168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814473:-1
position: 814473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:811967-812091:-1:exon

position:811967:-1
position: 811967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812091:-1
position: 812091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:810985-811182:-1:exon

position:810985:-1
position: 810985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811182:-1
position: 811182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:807071-807190:-1:exon

position:807071:-1
position: 807071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807190:-1
position: 807190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:802530-802667:-1:exon

position:802530:-1
position: 802530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802667:-1
position: 802667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:798989-799177:-1:exon

position:798989:-1
position: 798989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799177:-1
position: 799177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:794589-795034:-1:exon

position:795034:-1
position: 795034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111050644
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111050644
product: eukaryotic translation initiation factor 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1127 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_039437371.1
SIO_010081: LOC111050644
subclass of: SO_0000673
so part of: LOC111050644
location: complement(join(794589..795034,798989..799177,802530..802667,807071..807190,810985..811182,811967..812091,814168..814473,820850..821420,827686..827803,890231..890363,891153..891289,891398..891544))
location: region:794589-891544:-1
so has part: feature:891398-891544:-1:exon
so has part: feature:891153-891289:-1:exon
so has part: feature:890231-890363:-1:exon
so has part: feature:827686-827803:-1:exon
so has part: feature:820850-821420:-1:exon
so has part: feature:814168-814473:-1:exon
so has part: feature:811967-812091:-1:exon
so has part: feature:810985-811182:-1:exon
so has part: feature:807071-807190:-1:exon
so has part: feature:802530-802667:-1:exon
so has part: feature:798989-799177:-1:exon
so has part: feature:794589-795034:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:891398-891544:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:891153-891289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:890231-890363:-1:exon

position:890231:-1
position: 890231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890363:-1
position: 890363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:827686-827803:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:820850-821420:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:814168-814473:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:811967-812091:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:810985-811182:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:807071-807190:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:802530-802667:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:798989-799177:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:794589-795034:-1:exon

LOC111050644
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111050644
product: eukaryotic translation initiation factor 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1053 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_039437373.1
SIO_010081: LOC111050644
subclass of: SO_0000673
so part of: LOC111050644
location: complement(join(794589..795034,798989..799177,802530..802667,807071..807190,810985..811182,811967..812091,814168..814473,820850..821420,827686..827803,890231..890363,890725..890870))
location: region:794589-890870:-1
so has part: feature:890725-890870:-1:exon
so has part: feature:890231-890363:-1:exon
so has part: feature:827686-827803:-1:exon
so has part: feature:820850-821420:-1:exon
so has part: feature:814168-814473:-1:exon
so has part: feature:811967-812091:-1:exon
so has part: feature:810985-811182:-1:exon
so has part: feature:807071-807190:-1:exon
so has part: feature:802530-802667:-1:exon
so has part: feature:798989-799177:-1:exon
so has part: feature:794589-795034:-1:exon

position:890870:-1
position: 890870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:890725-890870:-1:exon

position:890725:-1
position: 890725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:890231-890363:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:827686-827803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:820850-821420:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:814168-814473:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:811967-812091:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:810985-811182:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:807071-807190:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:802530-802667:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:798989-799177:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:794589-795034:-1:exon

LOC111050644
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111050644
product: eukaryotic translation initiation factor 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1085 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_039437372.1
SIO_010081: LOC111050644
subclass of: SO_0000673
so part of: LOC111050644
location: complement(join(794589..795034,798989..799177,802530..802667,807071..807190,810985..811182,811967..812091,814168..814473,820850..821420,827686..827803,828659..829111))
location: region:794589-829111:-1
so has part: feature:828659-829111:-1:exon
so has part: feature:827686-827803:-1:exon
so has part: feature:820850-821420:-1:exon
so has part: feature:814168-814473:-1:exon
so has part: feature:811967-812091:-1:exon
so has part: feature:810985-811182:-1:exon
so has part: feature:807071-807190:-1:exon
so has part: feature:802530-802667:-1:exon
so has part: feature:798989-799177:-1:exon
so has part: feature:794589-795034:-1:exon

position:829111:-1
position: 829111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:828659-829111:-1:exon

position:828659:-1
position: 828659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:827686-827803:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:820850-821420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:814168-814473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:811967-812091:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810985-811182:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:807071-807190:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:802530-802667:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:798989-799177:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:794589-795034:-1:exon

LOC111050644
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111050644
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 5
translation: MENTVNVKRNVSDAFYRYKMPRLMAKVEGKGNGIKTVIVNMAEVAKAIGRPATYPTKYFGCELGAQTQFDFKNDRFIVNGSHDAAKLQDLLDGFIKKFVLCPSCDNPETDLIVSTKKGTISQGCKACGFHGPLEFNHKLNTFILKNPPNLNPAAQGSSLTEGKRGKRKKNGETNGDARSGSPRSEEEPDLIVDAPQKVAPKETEEDLDWAVDVSEEAVRARLQDLTDGAKGLTISDDLEKSEKERMDIFYTAVKAKCSSKDPQVLTQPSAAKELLVEAERLEIKSKAPLVLAELLFDEKIHIQIKKHRLLLLHFTHEDTKAQRYLIGGIEQVIGLHKESLLPKVPAILKLLYDMDVLEEKVILEWGSKTSKKYVSKELSQEIHTKAEPFITWLKEAEEEEESSEEEDEDDLEIEYDDRAKASPLKENKVSAPVKKRVVDEEEEGGDDVDIDAI
SIO_010081: LOC111050644
subclass of: SO_0000673
so part of: LOC111050644
location: complement(join(794909..795034,798989..799177,802530..802667,807071..807190,810985..811182,811967..812091,814168..814473,820850..821009))
location: region:794909-821009:-1
so has part: feature:820850-821009:-1:exon
so has part: feature:814168-814473:-1:exon
so has part: feature:811967-812091:-1:exon
so has part: feature:810985-811182:-1:exon
so has part: feature:807071-807190:-1:exon
so has part: feature:802530-802667:-1:exon
so has part: feature:798989-799177:-1:exon
so has part: feature:794909-795034:-1:exon

XP_039293304.1
type: Protein
SIO_000068: ncbiprotein

position:794909:-1
position: 794909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:821009:-1
position: 821009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:820850-821009:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:814168-814473:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:811967-812091:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:810985-811182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:807071-807190:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:802530-802667:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:798989-799177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:794909-795034:-1:exon

LOC111050644
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111050644
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 5
translation: MENTVNVKRNVSDAFYRYKMPRLMAKVEGKGNGIKTVIVNMAEVAKAIGRPATYPTKYFGCELGAQTQFDFKNDRFIVNGSHDAAKLQDLLDGFIKKFVLCPSCDNPETDLIVSTKKGTISQGCKACGFHGPLEFNHKLNTFILKNPPNLNPAAQGSSLTEGKRGKRKKNGETNGDARSGSPRSEEEPDLIVDAPQKVAPKETEEDLDWAVDVSEEAVRARLQDLTDGAKGLTISDDLEKSEKERMDIFYTAVKAKCSSKDPQVLTQPSAAKELLVEAERLEIKSKAPLVLAELLFDEKIHIQIKKHRLLLLHFTHEDTKAQRYLIGGIEQVIGLHKESLLPKVPAILKLLYDMDVLEEKVILEWGSKTSKKYVSKELSQEIHTKAEPFITWLKEAEEEEESSEEEDEDDLEIEYDDRAKASPLKENKVSAPVKKRVVDEEEEGGDDVDIDAI
SIO_010081: LOC111050644
subclass of: SO_0000673
so part of: LOC111050644
location: complement(join(794909..795034,798989..799177,802530..802667,807071..807190,810985..811182,811967..812091,814168..814473,820850..821009))
location: region:794909-821009:-1
so has part: feature:820850-821009:-1:exon
so has part: feature:814168-814473:-1:exon
so has part: feature:811967-812091:-1:exon
so has part: feature:810985-811182:-1:exon
so has part: feature:807071-807190:-1:exon
so has part: feature:802530-802667:-1:exon
so has part: feature:798989-799177:-1:exon
so has part: feature:794909-795034:-1:exon

XP_039293305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:820850-821009:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:814168-814473:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:811967-812091:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:810985-811182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:807071-807190:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:802530-802667:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:798989-799177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:794909-795034:-1:exon

LOC111050644
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111050644
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 5
translation: MENTVNVKRNVSDAFYRYKMPRLMAKVEGKGNGIKTVIVNMAEVAKAIGRPATYPTKYFGCELGAQTQFDFKNDRFIVNGSHDAAKLQDLLDGFIKKFVLCPSCDNPETDLIVSTKKGTISQGCKACGFHGPLEFNHKLNTFILKNPPNLNPAAQGSSLTEGKRGKRKKNGETNGDARSGSPRSEEEPDLIVDAPQKVAPKETEEDLDWAVDVSEEAVRARLQDLTDGAKGLTISDDLEKSEKERMDIFYTAVKAKCSSKDPQVLTQPSAAKELLVEAERLEIKSKAPLVLAELLFDEKIHIQIKKHRLLLLHFTHEDTKAQRYLIGGIEQVIGLHKESLLPKVPAILKLLYDMDVLEEKVILEWGSKTSKKYVSKELSQEIHTKAEPFITWLKEAEEEEESSEEEDEDDLEIEYDDRAKASPLKENKVSAPVKKRVVDEEEEGGDDVDIDAI
SIO_010081: LOC111050644
subclass of: SO_0000673
so part of: LOC111050644
location: complement(join(794909..795034,798989..799177,802530..802667,807071..807190,810985..811182,811967..812091,814168..814473,820850..821009))
location: region:794909-821009:-1
so has part: feature:820850-821009:-1:exon
so has part: feature:814168-814473:-1:exon
so has part: feature:811967-812091:-1:exon
so has part: feature:810985-811182:-1:exon
so has part: feature:807071-807190:-1:exon
so has part: feature:802530-802667:-1:exon
so has part: feature:798989-799177:-1:exon
so has part: feature:794909-795034:-1:exon

XP_039293306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:820850-821009:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:814168-814473:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:811967-812091:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:810985-811182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:807071-807190:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:802530-802667:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:798989-799177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:794909-795034:-1:exon

LOC111050644
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111050644
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 5
translation: MENTVNVKRNVSDAFYRYKMPRLMAKVEGKGNGIKTVIVNMAEVAKAIGRPATYPTKYFGCELGAQTQFDFKNDRFIVNGSHDAAKLQDLLDGFIKKFVLCPSCDNPETDLIVSTKKGTISQGCKACGFHGPLEFNHKLNTFILKNPPNLNPAAQGSSLTEGKRGKRKKNGETNGDARSGSPRSEEEPDLIVDAPQKVAPKETEEDLDWAVDVSEEAVRARLQDLTDGAKGLTISDDLEKSEKERMDIFYTAVKAKCSSKDPQVLTQPSAAKELLVEAERLEIKSKAPLVLAELLFDEKIHIQIKKHRLLLLHFTHEDTKAQRYLIGGIEQVIGLHKESLLPKVPAILKLLYDMDVLEEKVILEWGSKTSKKYVSKELSQEIHTKAEPFITWLKEAEEEEESSEEEDEDDLEIEYDDRAKASPLKENKVSAPVKKRVVDEEEEGGDDVDIDAI
SIO_010081: LOC111050644
subclass of: SO_0000673
so part of: LOC111050644
location: complement(join(794909..795034,798989..799177,802530..802667,807071..807190,810985..811182,811967..812091,814168..814473,820850..821009))
location: region:794909-821009:-1
so has part: feature:820850-821009:-1:exon
so has part: feature:814168-814473:-1:exon
so has part: feature:811967-812091:-1:exon
so has part: feature:810985-811182:-1:exon
so has part: feature:807071-807190:-1:exon
so has part: feature:802530-802667:-1:exon
so has part: feature:798989-799177:-1:exon
so has part: feature:794909-795034:-1:exon

XP_039293307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:820850-821009:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:814168-814473:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:811967-812091:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:810985-811182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:807071-807190:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:802530-802667:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:798989-799177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:794909-795034:-1:exon

LOC111060949
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111060949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 891872..907204
location: region:891872-907204:1
so has part: feature:891872-907204:1:exon
subclass of: SO_0000010

111060949
type: Gene
SIO_000068: ncbigene

position:891872:1
position: 891872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907204:1
position: 907204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:891872-907204:1:exon

LOC111060949
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111060949
product: zinc finger protein 622
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 82 long SRA reads, 9 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_022348637.2
SIO_010081: LOC111060949
subclass of: SO_0000673
so part of: LOC111060949
location: join(891872..893024,895870..895983,906017..907204)
location: region:891872-907204:1
so has part: feature:891872-893024:1:exon
so has part: feature:895870-895983:1:exon
so has part: feature:906017-907204:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:891872-893024:1:exon

position:893024:1
position: 893024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:895870-895983:1:exon

position:895870:1
position: 895870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895983:1
position: 895983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:906017-907204:1:exon

position:906017:1
position: 906017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111060949
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111060949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 622
translation: MTSKYTCITCRVAFNDVEFQRKHYKTDWHRYNLKRKVAELPPVTAEDFQKKVLKQRHDDAEISKPSATYCMVCKKSYKTAKAFINHSNSKQHQDKLEENSHSVEDSETNGTENINEHLEISCPSIGKVSKKIPNNVTQNEDESDDYETDSEVDSDDSGWEVEISENNPILKNNCLFCSHHSRSQIRNLEHMTLIHSFFIPDAEYLVDLKGLLLYLGEKVCMGFMCLWCNDKGKAFYSMESAQQHMTDKGHCKMLHEGETLAEYAEYYDYSSSYPDHAESMEVDEEVDVNIIDGNDYQLVLPSGATIGHRSLMKYYRQNFDPDRVVAPYRGKINRVLSQYRALGYKESDKQLVVKKARDINFMRRVQNKYSMMLGTKANKLQKHFRPQVNF
SIO_010081: LOC111060949
subclass of: SO_0000673
so part of: LOC111060949
location: join(892078..893024,895870..895983,906017..906128)
location: region:892078-906128:1
so has part: feature:892078-893024:1:exon
so has part: feature:895870-895983:1:exon
so has part: feature:906017-906128:1:exon

XP_022204329.2
type: Protein
SIO_000068: ncbiprotein

position:892078:1
position: 892078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:906128:1
position: 906128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892078-893024:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:895870-895983:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:906017-906128:1:exon

LOC111056184
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111056184
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 914166..929258
location: region:914166-929258:1
so has part: feature:914166-929258:1:exon
subclass of: SO_0000010

111056184
type: Gene
SIO_000068: ncbigene

position:914166:1
position: 914166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929258:1
position: 929258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:914166-929258:1:exon

LOC111056184
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111056184
product: uncharacterized LOC111056184, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_039437376.1
SIO_010081: LOC111056184
subclass of: SO_0000673
so part of: LOC111056184
location: join(914166..914475,924160..924409,927310..927579,928579..929257)
location: region:914166-929257:1
so has part: feature:914166-914475:1:exon
so has part: feature:924160-924409:1:exon
so has part: feature:927310-927579:1:exon
so has part: feature:928579-929257:1:exon

position:929257:1
position: 929257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:914166-914475:1:exon

position:914475:1
position: 914475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:924160-924409:1:exon

position:924160:1
position: 924160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924409:1
position: 924409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:927310-927579:1:exon

position:927310:1
position: 927310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927579:1
position: 927579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:928579-929257:1:exon

position:928579:1
position: 928579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111056184
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111056184
product: uncharacterized LOC111056184, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_039437377.1
SIO_010081: LOC111056184
subclass of: SO_0000673
so part of: LOC111056184
location: join(914493..914575,924160..924409,927310..927579,928579..929258)
location: region:914493-929258:1
so has part: feature:914493-914575:1:exon
so has part: feature:924160-924409:1:exon
so has part: feature:927310-927579:1:exon
so has part: feature:928579-929258:1:exon

position:914493:1
position: 914493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:914493-914575:1:exon

position:914575:1
position: 914575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:924160-924409:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:927310-927579:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:928579-929258:1:exon

LOC111056184
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111056184
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111056184
translation: MTLEGITFEWPVPEDRYLDVIVHLRHNFFADEPINRSVQLCEPGQPHAELEEHSLSTLKDGMSVMALDTHTGEVIGVALNGVQHMGDLNAAQEKLETMTDGSFKQIFGLLYSLNQTLDLFSKYEVENIFECRILSVDSRFRGRGLAKELMSRSETVAKDAGFKVFKEDATGLFSQKIAASLGHETVYEMEYSSYTNKDGEIIFNTPPPHNSLKIMVKLLQ
SIO_010081: LOC111056184
subclass of: SO_0000673
so part of: LOC111056184
location: join(924191..924409,927310..927579,928579..928752)
location: region:924191-928752:1
so has part: feature:924191-924409:1:exon
so has part: feature:927310-927579:1:exon
so has part: feature:928579-928752:1:exon

XP_039293310.1
type: Protein
SIO_000068: ncbiprotein

position:924191:1
position: 924191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928752:1
position: 928752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:924191-924409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927310-927579:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:928579-928752:1:exon

LOC111056184
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111056184
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111056184
translation: MTLEGITFEWPVPEDRYLDVIVHLRHNFFADEPINRSVQLCEPGQPHAELEEHSLSTLKDGMSVMALDTHTGEVIGVALNGVQHMGDLNAAQEKLETMTDGSFKQIFGLLYSLNQTLDLFSKYEVENIFECRILSVDSRFRGRGLAKELMSRSETVAKDAGFKVFKEDATGLFSQKIAASLGHETVYEMEYSSYTNKDGEIIFNTPPPHNSLKIMVKLLQ
SIO_010081: LOC111056184
subclass of: SO_0000673
so part of: LOC111056184
location: join(924191..924409,927310..927579,928579..928752)
location: region:924191-928752:1
so has part: feature:924191-924409:1:exon
so has part: feature:927310-927579:1:exon
so has part: feature:928579-928752:1:exon

XP_039293311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:924191-924409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927310-927579:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:928579-928752:1:exon

LOC111056180
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111056180
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 931835..939706
location: region:931835-939706:1
so has part: feature:931835-939706:1:exon
subclass of: SO_0000010

111056180
type: Gene
SIO_000068: ncbigene

position:931835:1
position: 931835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:939706:1
position: 939706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:931835-939706:1:exon

LOC111056180
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111056180
product: uncharacterized LOC111056180
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 197 long SRA reads, and 62% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_022343514.2
SIO_010081: LOC111056180
subclass of: SO_0000673
so part of: LOC111056180
location: join(931835..932250,933697..933934,937605..937877,939515..939706)
location: region:931835-939706:1
so has part: feature:931835-932250:1:exon
so has part: feature:933697-933934:1:exon
so has part: feature:937605-937877:1:exon
so has part: feature:939515-939706:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:931835-932250:1:exon

position:932250:1
position: 932250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:933697-933934:1:exon

position:933697:1
position: 933697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933934:1
position: 933934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:937605-937877:1:exon

position:937605:1
position: 937605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937877:1
position: 937877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:939515-939706:1:exon

position:939515:1
position: 939515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111056180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111056180
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111056180
translation: MFRILNLRSNYQKIIKPMIYRYSSKPRNRLEGIKFEYPVPESRFEEVVNLFRNHFYVDEPLLAALKLCKRGEPQPEMDDYCMKNLKEGFSIAALDEKTDKVIATVMNGIIHDCDPDDFNEKLETMTGKIKEIFKLLYYSNQHLDLFCRYNVEEIFEIRLLSVDSKYFGRGLAKELIKRSVDLGQESGYRYVIAKADCTGFFSQKLLSGYGFQKIHEIRYSCYKDKYKNVIFRTAPPHDTLAVMVKQYPDNRCLI
SIO_010081: LOC111056180
subclass of: SO_0000673
so part of: LOC111056180
location: join(932189..932250,933697..933934,937605..937877,939515..939706)
location: region:932189-939706:1
so has part: feature:932189-932250:1:exon
so has part: feature:933697-933934:1:exon
so has part: feature:937605-937877:1:exon
so has part: feature:939515-939706:1:exon

XP_022199206.2
type: Protein
SIO_000068: ncbiprotein

position:932189:1
position: 932189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:932189-932250:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933697-933934:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937605-937877:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:939515-939706:1:exon

LOC111056177
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111056177
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(946616..963135)
location: region:946616-963135:-1
so has part: feature:946616-963135:-1:exon
subclass of: SO_0000010

111056177
type: Gene
SIO_000068: ncbigene

position:946616:-1
position: 946616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:963135:-1
position: 963135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946616-963135:-1:exon

LOC111056177
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111056177
product: V-type proton ATPase subunit D
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 173 long SRA reads, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_039437374.1
SIO_010081: LOC111056177
subclass of: SO_0000673
so part of: LOC111056177
location: complement(join(946616..947671,955505..955583,956502..956717,958863..959010,961806..961923,962864..963135))
location: region:946616-963135:-1
so has part: feature:962864-963135:-1:exon
so has part: feature:961806-961923:-1:exon
so has part: feature:958863-959010:-1:exon
so has part: feature:956502-956717:-1:exon
so has part: feature:955505-955583:-1:exon
so has part: feature:946616-947671:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:962864-963135:-1:exon

position:962864:-1
position: 962864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:961806-961923:-1:exon

position:961806:-1
position: 961806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:961923:-1
position: 961923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:958863-959010:-1:exon

position:958863:-1
position: 958863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:959010:-1
position: 959010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:956502-956717:-1:exon

position:956502:-1
position: 956502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:956717:-1
position: 956717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:955505-955583:-1:exon

position:955505:-1
position: 955505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:955583:-1
position: 955583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:946616-947671:-1:exon

position:947671:-1
position: 947671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111056177
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111056177
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-type proton ATPase subunit D
translation: MSGKEKLAIFPSRGAQTLMKSRLKGAQKGHSLLKKKADALQMRFRLILSKIITTKSLMGEVMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKVRTKKDNVAGVTLPVFESYQDGTDTYELAGLARGGQQLAKLKKNYQSAVKLLVELASLQTSFVTLDEVIKVTNRRVNAIEHVIIPRIERTLAYIISELDELEREEFYRLKKIQDKKRIARKKAEALQAEAIASGEATRYGTNNMLDEGDEDLLF
SIO_010081: LOC111056177
subclass of: SO_0000673
so part of: LOC111056177
location: complement(join(947530..947671,955505..955583,956502..956717,958863..959010,961806..961923,962864..962904))
location: region:947530-962904:-1
so has part: feature:962864-962904:-1:exon
so has part: feature:961806-961923:-1:exon
so has part: feature:958863-959010:-1:exon
so has part: feature:956502-956717:-1:exon
so has part: feature:955505-955583:-1:exon
so has part: feature:947530-947671:-1:exon

XP_039293308.1
type: Protein
SIO_000068: ncbiprotein

position:947530:-1
position: 947530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962904:-1
position: 962904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:962864-962904:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961806-961923:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:958863-959010:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:956502-956717:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:955505-955583:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:947530-947671:-1:exon

LOC111056175
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111056175
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 963230..1042634
location: region:963230-1042634:1
so has part: feature:963230-1042634:1:exon
subclass of: SO_0000010

111056175
type: Gene
SIO_000068: ncbigene

position:963230:1
position: 963230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042634:1
position: 1042634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:963230-1042634:1:exon

LOC111056175
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111056175
product: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase I
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 long SRA reads, 15 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039438160.1
SIO_010081: LOC111056175
subclass of: SO_0000673
so part of: LOC111056175
location: join(963230..963633,964086..964159,1027202..1027341,1029793..1029874,1031050..1031193,1034018..1034206,1037584..1037688,1040603..1042634)
location: region:963230-1042634:1
so has part: feature:963230-963633:1:exon
so has part: feature:964086-964159:1:exon
so has part: feature:1027202-1027341:1:exon
so has part: feature:1029793-1029874:1:exon
so has part: feature:1031050-1031193:1:exon
so has part: feature:1034018-1034206:1:exon
so has part: feature:1037584-1037688:1:exon
so has part: feature:1040603-1042634:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:963230-963633:1:exon

position:963633:1
position: 963633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:964086-964159:1:exon

position:964086:1
position: 964086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964159:1
position: 964159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1027202-1027341:1:exon

position:1027202:1
position: 1027202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027341:1
position: 1027341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1029793-1029874:1:exon

position:1029793:1
position: 1029793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029874:1
position: 1029874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1031050-1031193:1:exon

position:1031050:1
position: 1031050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031193:1
position: 1031193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1034018-1034206:1:exon

position:1034018:1
position: 1034018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034206:1
position: 1034206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1037584-1037688:1:exon

position:1037584:1
position: 1037584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037688:1
position: 1037688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1040603-1042634:1:exon

position:1040603:1
position: 1040603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111056175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111056175
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase I
translation: MYSTNSHKWSIALASQDMAFKRKLSLYAVLVILVFLWFVGVKNRGGITYFSSEEDRYKSMRDALDAYEMELKFTREDMKRTLKLFKSSCGKWNPDLPVIYAITPTYERPVQKAELTRPISNAGRVGLVVRSVTNFNLLSPTGSWEPNWTKPRGVLQRNAGLQWLRENRTPEDKGVIYFADDDNTYSLHIFNEMRWTKRVSVWPVGLVGGLLVERPLVNAAGKVSGFNSVWGTDRPFPIDMAGFAINLQHLLAHPEVKFSFKVKMGHQESVFLDQLTKKEDLEPLADNCTKIYVWHTRTEEPSLKFEKQLKNKGKSSLDAMKV
SIO_010081: LOC111056175
subclass of: SO_0000673
so part of: LOC111056175
location: join(963498..963633,964086..964159,1027202..1027341,1029793..1029874,1031050..1031193,1034018..1034206,1037584..1037688,1040603..1040701)
location: region:963498-1040701:1
so has part: feature:963498-963633:1:exon
so has part: feature:964086-964159:1:exon
so has part: feature:1027202-1027341:1:exon
so has part: feature:1029793-1029874:1:exon
so has part: feature:1031050-1031193:1:exon
so has part: feature:1034018-1034206:1:exon
so has part: feature:1037584-1037688:1:exon
so has part: feature:1040603-1040701:1:exon

XP_039294094.1
type: Protein
SIO_000068: ncbiprotein

position:963498:1
position: 963498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040701:1
position: 1040701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:963498-963633:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:964086-964159:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1027202-1027341:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1029793-1029874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1031050-1031193:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1034018-1034206:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1037584-1037688:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1040603-1040701:1:exon

LOC120353511
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353511
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 969270..981233
location: region:969270-981233:1
so has part: feature:969270-981233:1:exon
subclass of: SO_0000010

120353511
type: Gene
SIO_000068: ncbigene

position:969270:1
position: 969270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981233:1
position: 981233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:969270-981233:1:exon

LOC120353511
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353511
product: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 55 long SRA reads, 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_039437378.1
SIO_010081: LOC120353511
subclass of: SO_0000673
so part of: LOC120353511
location: join(969270..969467,972287..972475,976349..976453,978616..978682,979607..981233)
location: region:969270-981233:1
so has part: feature:969270-969467:1:exon
so has part: feature:972287-972475:1:exon
so has part: feature:976349-976453:1:exon
so has part: feature:978616-978682:1:exon
so has part: feature:979607-981233:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:969270-969467:1:exon

position:969467:1
position: 969467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:972287-972475:1:exon

position:972287:1
position: 972287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:972475:1
position: 972475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:976349-976453:1:exon

position:976349:1
position: 976349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:976453:1
position: 976453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:978616-978682:1:exon

position:978616:1
position: 978616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978682:1
position: 978682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:979607-981233:1:exon

position:979607:1
position: 979607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120353511
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353511
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3-like
translation: MRWTKRVSVWPVGLVGGLLVERPLVNAAGKVSGFNSVWGTDRPFPIDMAGFAINLQHLLAHPEVKFSFKVKMGHQESVFLDQLTKKEDLEPLADNCTKIYVWHTRTEEPSLKFEKQLKNKVADLFSFFK
SIO_010081: LOC120353511
subclass of: SO_0000673
so part of: LOC120353511
location: join(972287..972475,976349..976453,978616..978682,979607..979635)
location: region:972287-979635:1
so has part: feature:972287-972475:1:exon
so has part: feature:976349-976453:1:exon
so has part: feature:978616-978682:1:exon
so has part: feature:979607-979635:1:exon

XP_039293312.1
type: Protein
SIO_000068: ncbiprotein

position:979635:1
position: 979635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972287-972475:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:976349-976453:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:978616-978682:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:979607-979635:1:exon

LOC111061173
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111061173
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(984201..987346)
location: region:984201-987346:-1
so has part: feature:984201-987346:-1:exon
subclass of: SO_0000010

111061173
type: Gene
SIO_000068: ncbigene

position:984201:-1
position: 984201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987346:-1
position: 987346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:984201-987346:-1:exon

LOC111061173
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111061173
product: chromatin modification-related protein MEAF6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 526 long SRA reads, 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_039437379.1
SIO_010081: LOC111061173
subclass of: SO_0000673
so part of: LOC111061173
location: complement(join(984201..984669,987144..987346))
location: region:984201-987346:-1
so has part: feature:987144-987346:-1:exon
so has part: feature:984201-984669:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:987144-987346:-1:exon

position:987144:-1
position: 987144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:984201-984669:-1:exon

position:984669:-1
position: 984669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111061173
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111061173
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromatin modification-related protein MEAF6
translation: MASKSSSSDARAELAELVRRKAEIAETLANLERQIYAFEGSYLEDTQLYGNIIRGWDRYLTTNKNTNSKAEKGNRKFKDAERLFSKSSITSQAVSNPEFKTEMCQSD
SIO_010081: LOC111061173
subclass of: SO_0000673
so part of: LOC111061173
location: complement(join(984421..984669,987144..987218))
location: region:984421-987218:-1
so has part: feature:987144-987218:-1:exon
so has part: feature:984421-984669:-1:exon

XP_039293313.1
type: Protein
SIO_000068: ncbiprotein

position:984421:-1
position: 984421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987218:-1
position: 987218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:987144-987218:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:984421-984669:-1:exon

LOC120353512
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353512
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1046899..1049053)
location: region:1046899-1049053:-1
so has part: feature:1046899-1049053:-1:exon
subclass of: SO_0000010

120353512
type: Gene
SIO_000068: ncbigene

position:1046899:-1
position: 1046899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1049053:-1
position: 1049053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1046899-1049053:-1:exon

LOC120353512
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353512
product: chromatin modification-related protein MEAF6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 216 long SRA reads, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_039437380.1
SIO_010081: LOC120353512
subclass of: SO_0000673
so part of: LOC120353512
location: complement(join(1046899..1047268,1048851..1049053))
location: region:1046899-1049053:-1
so has part: feature:1048851-1049053:-1:exon
so has part: feature:1046899-1047268:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1048851-1049053:-1:exon

position:1048851:-1
position: 1048851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1046899-1047268:-1:exon

position:1047268:-1
position: 1047268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120353512
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353512
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromatin modification-related protein MEAF6-like
translation: MASKSSSSDARAELAELVRRKAEIAETLANLERQIYAFEGSYLEDTQLYGNIIRGWDRYLTTNKNTNSKAEKGNRKFKDAERLFSKSSITSQAVSNPEFKTEMCQSD
SIO_010081: LOC120353512
subclass of: SO_0000673
so part of: LOC120353512
location: complement(join(1047020..1047268,1048851..1048925))
location: region:1047020-1048925:-1
so has part: feature:1048851-1048925:-1:exon
so has part: feature:1047020-1047268:-1:exon

XP_039293314.1
type: Protein
SIO_000068: ncbiprotein

position:1047020:-1
position: 1047020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1048925:-1
position: 1048925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048851-1048925:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1047020-1047268:-1:exon

LOC111056178
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111056178
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1057255..>1062099)
location: region:1057255-1062099:-1
so has part: feature:1057255-1062099:-1:exon
subclass of: SO_0000010

111056178
type: Gene
SIO_000068: ncbigene

position:1057255:-1
position: 1057255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1062099:-1
position: 1062099
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057255-1062099:-1:exon

LOC111056178
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111056178
product: isochorismatase domain-containing protein 1
inference: similar to RNA sequence (same species):INSD:GGNH01004744.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 117 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, 4 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_039437381.1
SIO_010081: LOC111056178
subclass of: SO_0000673
so part of: LOC111056178
location: complement(join(1057255..1057887,1058610..1058726,1061890..>1062099))
location: region:1057255-1062099:-1
so has part: feature:1061890-1062099:-1:exon
so has part: feature:1058610-1058726:-1:exon
so has part: feature:1057255-1057887:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1061890-1062099:-1:exon

position:1061890:-1
position: 1061890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1058610-1058726:-1:exon

position:1058610:-1
position: 1058610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1058726:-1
position: 1058726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1057255-1057887:-1:exon

position:1057887:-1
position: 1057887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111056178
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111056178
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isochorismatase domain-containing protein 1
translation: MQNGRTVKELDVSHAHGIYPKTKFSMAIPEVNEQLDKLCDGNVQCGVLFGMQAHISIEQTAAELCGLGIQVHVIADACTASSQEERILALQRLKQIGCFITTCESILYKLLGDEDHPKANEVKQLLDKPRPPTGLAVLL
SIO_010081: LOC111056178
subclass of: SO_0000673
so part of: LOC111056178
location: complement(join(1057741..1057887,1058610..1058726,1061890..1062045))
location: region:1057741-1062045:-1
so has part: feature:1061890-1062045:-1:exon
so has part: feature:1058610-1058726:-1:exon
so has part: feature:1057741-1057887:-1:exon

XP_039293315.1
type: Protein
SIO_000068: ncbiprotein

position:1057741:-1
position: 1057741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1062045:-1
position: 1062045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1061890-1062045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1058610-1058726:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1057741-1057887:-1:exon

LOC111056174
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111056174
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1064001..1080281
location: region:1064001-1080281:1
so has part: feature:1064001-1080281:1:exon
subclass of: SO_0000010

111056174
type: Gene
SIO_000068: ncbigene

position:1064001:1
position: 1064001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080281:1
position: 1080281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1064001-1080281:1:exon

LOC111056174
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111056174
product: proteasome subunit alpha type-3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1645 long SRA reads, 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_039437384.1
SIO_010081: LOC111056174
subclass of: SO_0000673
so part of: LOC111056174
location: join(1064001..1064277,1064803..1065009,1072092..1072162,1077462..1077636,1078878..1078990,1080046..1080281)
location: region:1064001-1080281:1
so has part: feature:1064001-1064277:1:exon
so has part: feature:1064803-1065009:1:exon
so has part: feature:1072092-1072162:1:exon
so has part: feature:1077462-1077636:1:exon
so has part: feature:1078878-1078990:1:exon
so has part: feature:1080046-1080281:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1064001-1064277:1:exon

position:1064277:1
position: 1064277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1064803-1065009:1:exon

position:1064803:1
position: 1064803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1065009:1
position: 1065009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1072092-1072162:1:exon

position:1072092:1
position: 1072092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1072162:1
position: 1072162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1077462-1077636:1:exon

position:1077462:1
position: 1077462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077636:1
position: 1077636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1078878-1078990:1:exon

position:1078878:1
position: 1078878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078990:1
position: 1078990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1080046-1080281:1:exon

position:1080046:1
position: 1080046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111056174
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111056174
product: proteasome subunit alpha type-3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 234 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_039437382.1
SIO_010081: LOC111056174
subclass of: SO_0000673
so part of: LOC111056174
location: join(1064125..1064277,1064803..1065009,1068353..1068423,1077462..1077636,1078878..1078990,1080046..1080281)
location: region:1064125-1080281:1
so has part: feature:1064125-1064277:1:exon
so has part: feature:1064803-1065009:1:exon
so has part: feature:1068353-1068423:1:exon
so has part: feature:1077462-1077636:1:exon
so has part: feature:1078878-1078990:1:exon
so has part: feature:1080046-1080281:1:exon

position:1064125:1
position: 1064125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1064125-1064277:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064803-1065009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1068353-1068423:1:exon

position:1068353:1
position: 1068353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068423:1
position: 1068423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1077462-1077636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1078878-1078990:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1080046-1080281:1:exon

LOC111056174
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111056174
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit alpha type-3 isoform X1
translation: MSSIGTGYDLSASQFSPDGRVFQVEYAQKAVEIGGTAIGLRGKDGVVLAVEKIVTSKLYEPGSGKKIFHIDEGIGMATSGLISDARHLAENARNEASSYRNQYGNSVPLKYLNDRVSMYMHVYTLYSAVRPFGCSIIMGSYEKGQPVMYMVDPSGISHGYYGCAVGKAKQAAKTEIEKLKLSELTCKELVKEAARIIYMVHDELKDKSFELELSWVGKHTNGRHEFVPKAVLAEAEEAAKAAMEEHSDSDGEDM
SIO_010081: LOC111056174
subclass of: SO_0000673
so part of: LOC111056174
location: join(1064257..1064277,1064803..1065009,1068353..1068423,1077462..1077636,1078878..1078990,1080046..1080223)
location: region:1064257-1080223:1
so has part: feature:1064257-1064277:1:exon
so has part: feature:1064803-1065009:1:exon
so has part: feature:1068353-1068423:1:exon
so has part: feature:1077462-1077636:1:exon
so has part: feature:1078878-1078990:1:exon
so has part: feature:1080046-1080223:1:exon

XP_039293316.1
type: Protein
SIO_000068: ncbiprotein

position:1064257:1
position: 1064257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080223:1
position: 1080223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1064257-1064277:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064803-1065009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1068353-1068423:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1077462-1077636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1078878-1078990:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1080046-1080223:1:exon

LOC111056174
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111056174
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit alpha type-3 isoform X2
translation: MSSIGTGYDLSASQFSPDGRVFQVEYAQKAVEIGGTAIGLRGKDGVVLAVEKIVTSKLYEPGSGKKIFHIDEGIGMATSGLISDARHLAENARNEASSYRNQYGNSVPLKYLNDRVSMYMHVYTLYSAVRPFGCSIIMGSYEKGQPVMYMVDPSGISHGYYGCAVGKAKQAAKTEIEKLKLSELTCKELVKEAARIIYMVHDELKDKSFELELSWVGKHTNGRHEFVPKAVLAEAEEAAKAAMEEHSDSDGEDM
SIO_010081: LOC111056174
subclass of: SO_0000673
so part of: LOC111056174
location: join(1064257..1064277,1064803..1065009,1072092..1072162,1077462..1077636,1078878..1078990,1080046..1080223)
location: region:1064257-1080223:1
so has part: feature:1064257-1064277:1:exon
so has part: feature:1064803-1065009:1:exon
so has part: feature:1072092-1072162:1:exon
so has part: feature:1077462-1077636:1:exon
so has part: feature:1078878-1078990:1:exon
so has part: feature:1080046-1080223:1:exon

XP_039293318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1064257-1064277:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064803-1065009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1072092-1072162:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1077462-1077636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1078878-1078990:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1080046-1080223:1:exon

LOC120353622
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353622
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1089180..1098904)
location: region:1089180-1098904:-1
so has part: feature:1089180-1098904:-1:exon
subclass of: SO_0000010

120353622
type: Gene
SIO_000068: ncbigene

position:1089180:-1
position: 1089180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1098904:-1
position: 1098904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1089180-1098904:-1:exon

LOC120353622
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353622
product: organic solute transporter alpha-like protein
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_039438161.1
SIO_010081: LOC120353622
subclass of: SO_0000673
so part of: LOC120353622
location: complement(join(1089180..1089421,1092817..1093069,1095979..1096075,1098646..1098904))
location: region:1089180-1098904:-1
so has part: feature:1098646-1098904:-1:exon
so has part: feature:1095979-1096075:-1:exon
so has part: feature:1092817-1093069:-1:exon
so has part: feature:1089180-1089421:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1098646-1098904:-1:exon

position:1098646:-1
position: 1098646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1095979-1096075:-1:exon

position:1095979:-1
position: 1095979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1096075:-1
position: 1096075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1092817-1093069:-1:exon

position:1092817:-1
position: 1092817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093069:-1
position: 1093069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1089180-1089421:-1:exon

position:1089421:-1
position: 1089421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120353622
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353622
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: organic solute transporter alpha-like protein
translation: MVCLRLQVVGLATYCAIVVPRAQLLAEAVXQGMFMASMYQLFCLLVAYCGGEAELIRKTKPDSLNTRVGPCCCWPCCCCLPLLAVNKTHVRMLRVLVLQLPVVQGLIYMVLLVMWAEEQSLYQVNYVYMQPIVVISILCGIWGMIMTMKMLTEVLKEHHMQGKFFVLQLVLLLGKLQGIIAKVLVNMDFMPCKPPITPTVYANLLYNSVMIWEMVLLSIVARIIYKKAVPDPNGSAELPQQICTIGIKINTPPPVITECPEKRKLSELQNNNGTHFIERF
SIO_010081: LOC120353622
subclass of: SO_0000673
so part of: LOC120353622
location: complement(join(1089189..1089421,1092817..1093069,1095979..1096075,1098646..1098904))
location: region:1089189-1098904:-1
so has part: feature:1098646-1098904:-1:exon
so has part: feature:1095979-1096075:-1:exon
so has part: feature:1092817-1093069:-1:exon
so has part: feature:1089189-1089421:-1:exon

XP_039294095.1
type: Protein
SIO_000068: ncbiprotein

position:1089189:-1
position: 1089189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1098646-1098904:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1095979-1096075:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1092817-1093069:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1089189-1089421:-1:exon

LOC120353513
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353513
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<1103071..1158508)
location: region:1103071-1158508:-1
so has part: feature:1103071-1158508:-1:exon
subclass of: SO_0000010

120353513
type: Gene
SIO_000068: ncbigene

position:1103071:-1
position: 1103071
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:1158508:-1
position: 1158508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103071-1158508:-1:exon

LOC120353513
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353513
product: uncharacterized LOC120353513
inference: similar to RNA sequence (same species):INSD:IACV01102603.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 154 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_039437385.1
SIO_010081: LOC120353513
subclass of: SO_0000673
so part of: LOC120353513
location: complement(join(<1103071..1103231,1157516..1158508))
location: region:1103071-1158508:-1
so has part: feature:1157516-1158508:-1:exon
so has part: feature:1103071-1103231:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1157516-1158508:-1:exon

position:1157516:-1
position: 1157516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1103071-1103231:-1:exon

position:1103231:-1
position: 1103231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120353513
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353513
inference: similar to RNA sequence (same species):INSD:IACV01102603.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 154 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120353513
translation: MEPAALIFSTTVLPTYKDKMSMDVITEHVGNLSTCTTEILPSIDEYYTAFNIWGFVLFSMGGVAVTIIFASYIDTLKHVMKNAPPIVKTHSAFVVSVYPV
SIO_010081: LOC120353513
subclass of: SO_0000673
so part of: LOC120353513
location: complement(<1103071..1103215)
location: region:1103071-1103215:-1
so has part: feature:1103071-1103215:-1:exon

XP_039293319.1
type: Protein
SIO_000068: ncbiprotein

position:1103215:-1
position: 1103215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103071-1103215:-1:exon

LOC111056179
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111056179
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1164095..1179759)
location: region:1164095-1179759:-1
so has part: feature:1164095-1179759:-1:exon
subclass of: SO_0000010

111056179
type: Gene
SIO_000068: ncbigene

position:1164095:-1
position: 1164095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1179759:-1
position: 1179759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1164095-1179759:-1:exon

LOC111056179
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111056179
product: cytochrome P450 4C1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_039437386.1
SIO_010081: LOC111056179
subclass of: SO_0000673
so part of: LOC111056179
location: complement(join(1164095..1165628,1168810..1168989,1170634..1170868,1174354..1174466,1176361..1176412,1179659..1179759))
location: region:1164095-1179759:-1
so has part: feature:1179659-1179759:-1:exon
so has part: feature:1176361-1176412:-1:exon
so has part: feature:1174354-1174466:-1:exon
so has part: feature:1170634-1170868:-1:exon
so has part: feature:1168810-1168989:-1:exon
so has part: feature:1164095-1165628:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1179659-1179759:-1:exon

position:1179659:-1
position: 1179659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1176361-1176412:-1:exon

position:1176361:-1
position: 1176361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176412:-1
position: 1176412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1174354-1174466:-1:exon

position:1174354:-1
position: 1174354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1174466:-1
position: 1174466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1170634-1170868:-1:exon

position:1170634:-1
position: 1170634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1170868:-1
position: 1170868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1168810-1168989:-1:exon

position:1168810:-1
position: 1168810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168989:-1
position: 1168989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1164095-1165628:-1:exon

position:1165628:-1
position: 1165628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111056179
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111056179
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome P450 4C1
translation: MKQAVCKKIHDFGLELINERREFLNKTENPTKDDEHSMSRLFLDQMMDYAKARNLSDLELSMAITDVIIAGSDTVACAIPYMIMMLALHQDIQDKVYEEIHGIFGDSNRAVEQKDMTEMVVMERVFKEVLRHCCPPHLARRVDKTIILRDVPIPVGSTLLIMLYKLHRDPQHWSHPDAFYPDHFLPENVEKRQKYTFLPFTSGQRACPGKKFSFIVVKTLMTTLLRKYKITTTVQPSEIKHIIGFMLEISDGCNVQLTPR
SIO_010081: LOC111056179
subclass of: SO_0000673
so part of: LOC111056179
location: complement(join(1165471..1165628,1168810..1168989,1170634..1170868,1174354..1174466,1176361..1176412,1179659..1179703))
location: region:1165471-1179703:-1
so has part: feature:1179659-1179703:-1:exon
so has part: feature:1176361-1176412:-1:exon
so has part: feature:1174354-1174466:-1:exon
so has part: feature:1170634-1170868:-1:exon
so has part: feature:1168810-1168989:-1:exon
so has part: feature:1165471-1165628:-1:exon

XP_039293320.1
type: Protein
SIO_000068: ncbiprotein

position:1165471:-1
position: 1165471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1179703:-1
position: 1179703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1179659-1179703:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1176361-1176412:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1174354-1174466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1170634-1170868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1168810-1168989:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1165471-1165628:-1:exon

LOC111059926
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111059926
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1182676..1207133)
location: region:1182676-1207133:-1
so has part: feature:1182676-1207133:-1:exon
subclass of: SO_0000010

111059926
type: Gene
SIO_000068: ncbigene

position:1182676:-1
position: 1182676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207133:-1
position: 1207133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1182676-1207133:-1:exon

LOC111059926
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111059926
product: cytochrome P450 4d2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_039438163.1
SIO_010081: LOC111059926
subclass of: SO_0000673
so part of: LOC111059926
location: complement(join(1182676..1182881,1192951..1193038,1194610..1194716,1206063..1206224,1206771..1206847,1207089..1207133))
location: region:1182676-1207133:-1
so has part: feature:1207089-1207133:-1:exon
so has part: feature:1206771-1206847:-1:exon
so has part: feature:1206063-1206224:-1:exon
so has part: feature:1194610-1194716:-1:exon
so has part: feature:1192951-1193038:-1:exon
so has part: feature:1182676-1182881:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1207089-1207133:-1:exon

position:1207089:-1
position: 1207089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1206771-1206847:-1:exon

position:1206771:-1
position: 1206771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206847:-1
position: 1206847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1206063-1206224:-1:exon

position:1206063:-1
position: 1206063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206224:-1
position: 1206224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1194610-1194716:-1:exon

position:1194610:-1
position: 1194610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1194716:-1
position: 1194716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1192951-1193038:-1:exon

position:1192951:-1
position: 1192951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193038:-1
position: 1193038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1182676-1182881:-1:exon

position:1182881:-1
position: 1182881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111059926
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111059926
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome P450 4d2-like
translation: MLTWIQIIIAIIVVYVIFEKFRQRRLGGSLPGPPTVPFFGNALLFQGYGIEDFVCIAIRLQEEFSNLFRLWLGRHLMVYVADPASLETIYKSNDNLNKSILYEFFTDYSRGVVVAGGEKWRGLRKVVNTTFHHSNMENYQKILNDCSQILCQVLEKKCDGPIFNMDPIIHRCMLQVICSRSTLL
SIO_010081: LOC111059926
subclass of: SO_0000673
so part of: LOC111059926
location: complement(join(1182676..1182881,1192951..1193038,1194610..1194716,1206063..1206216))
location: region:1182676-1206216:-1
so has part: feature:1206063-1206216:-1:exon
so has part: feature:1194610-1194716:-1:exon
so has part: feature:1192951-1193038:-1:exon
so has part: feature:1182676-1182881:-1:exon

XP_039294097.1
type: Protein
SIO_000068: ncbiprotein

position:1206216:-1
position: 1206216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1206063-1206216:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1194610-1194716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1192951-1193038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1182676-1182881:-1:exon

LOC120353514
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353514
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1209609..1212839)
location: region:1209609-1212839:-1
so has part: feature:1209609-1212839:-1:exon
subclass of: SO_0000011

120353514
type: Gene
SIO_000068: ncbigene

position:1209609:-1
position: 1209609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212839:-1
position: 1212839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1209609-1212839:-1:exon

LOC120353514
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC120353514
product: uncharacterized LOC120353514
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_005572427.1
SIO_010081: LOC120353514
subclass of: SO_0000673
so part of: LOC120353514
location: complement(join(1209609..1210065,1212514..1212839))
location: region:1209609-1212839:-1
so has part: feature:1212514-1212839:-1:exon
so has part: feature:1209609-1210065:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1212514-1212839:-1:exon

position:1212514:-1
position: 1212514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1209609-1210065:-1:exon

position:1210065:-1
position: 1210065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111060000
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111060000
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1215152..1273484)
location: region:1215152-1273484:-1
so has part: feature:1215152-1273484:-1:exon
subclass of: SO_0000010

111060000
type: Gene
SIO_000068: ncbigene

position:1215152:-1
position: 1215152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1273484:-1
position: 1273484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1215152-1273484:-1:exon

LOC111060000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111060000
product: carboxypeptidase Y, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 171 long SRA reads, 29 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_039437388.1
SIO_010081: LOC111060000
subclass of: SO_0000673
so part of: LOC111060000
location: complement(join(1215152..1215445,1218678..1218931,1221387..1221476,1250177..1251223,1273358..1273484))
location: region:1215152-1273484:-1
so has part: feature:1273358-1273484:-1:exon
so has part: feature:1250177-1251223:-1:exon
so has part: feature:1221387-1221476:-1:exon
so has part: feature:1218678-1218931:-1:exon
so has part: feature:1215152-1215445:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1273358-1273484:-1:exon

position:1273358:-1
position: 1273358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1250177-1251223:-1:exon

position:1250177:-1
position: 1250177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1251223:-1
position: 1251223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1221387-1221476:-1:exon

position:1221387:-1
position: 1221387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221476:-1
position: 1221476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1218678-1218931:-1:exon

position:1218678:-1
position: 1218678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1218931:-1
position: 1218931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1215152-1215445:-1:exon

position:1215445:-1
position: 1215445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111060000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111060000
product: carboxypeptidase Y, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94 long SRA reads, 29 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_039437389.1
SIO_010081: LOC111060000
subclass of: SO_0000673
so part of: LOC111060000
location: complement(join(1215152..1215445,1215969..1215972,1218678..1218931,1221387..1221476,1250177..1251223,1273358..1273484))
location: region:1215152-1273484:-1
so has part: feature:1273358-1273484:-1:exon
so has part: feature:1250177-1251223:-1:exon
so has part: feature:1221387-1221476:-1:exon
so has part: feature:1218678-1218931:-1:exon
so has part: feature:1215969-1215972:-1:exon
so has part: feature:1215152-1215445:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1273358-1273484:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1250177-1251223:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1221387-1221476:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1218678-1218931:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1215969-1215972:-1:exon

position:1215969:-1
position: 1215969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215972:-1
position: 1215972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1215152-1215445:-1:exon

LOC111060000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111060000
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carboxypeptidase Y
translation: MGVVIRSSTMKTTLSLALALLAVCEAGVTTKQFGYGVEIHHPPPHGHGGPYGSGYAAGHGYGGSYSMARMHQETTHHDHEPHHHVVSAASHHAPSLYVASPSHHDIAYLHHGVPDYHHNEIPLAAYYKPAYHSEEHDVVVQKAPLVHSHHEEIVPHHVTEHHGLEQVHHHIPEHHSLEHHGLEGHHINAHIEHHGSPHLEHHGIEAHHDAILVTPTPLSGPTHLPLLHGPTTPLPSPTPIIHHHGAITPTPLPYVHHESATPTPLPVLHHHEGVTPAPFVSHLHEGVTPVPYVSHGATPTPLPYLHHDGPTLAPIKGEFPIIGAPHPVVSLSHLPSSFHHTGYSGSEYANYAPHYDHEHHSYPKYAFSYGVNDPHTGDIKQQYEERDGDKVRGGYSLVEPDGSIRVVEYTADDHNGFNAVVKKIGPSHHLPLTVHHSGHTMSQDTTMRRSTPTLIRCPLTSITTTRW
SIO_010081: LOC111060000
subclass of: SO_0000673
so part of: LOC111060000
location: complement(join(1218698..1218931,1221387..1221476,1250177..1251223,1273358..1273390))
location: region:1218698-1273390:-1
so has part: feature:1273358-1273390:-1:exon
so has part: feature:1250177-1251223:-1:exon
so has part: feature:1221387-1221476:-1:exon
so has part: feature:1218698-1218931:-1:exon

XP_039293322.1
type: Protein
SIO_000068: ncbiprotein

position:1218698:-1
position: 1218698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1273390:-1
position: 1273390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1273358-1273390:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1250177-1251223:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1221387-1221476:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1218698-1218931:-1:exon

LOC111060000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111060000
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carboxypeptidase Y
translation: MGVVIRSSTMKTTLSLALALLAVCEAGVTTKQFGYGVEIHHPPPHGHGGPYGSGYAAGHGYGGSYSMARMHQETTHHDHEPHHHVVSAASHHAPSLYVASPSHHDIAYLHHGVPDYHHNEIPLAAYYKPAYHSEEHDVVVQKAPLVHSHHEEIVPHHVTEHHGLEQVHHHIPEHHSLEHHGLEGHHINAHIEHHGSPHLEHHGIEAHHDAILVTPTPLSGPTHLPLLHGPTTPLPSPTPIIHHHGAITPTPLPYVHHESATPTPLPVLHHHEGVTPAPFVSHLHEGVTPVPYVSHGATPTPLPYLHHDGPTLAPIKGEFPIIGAPHPVVSLSHLPSSFHHTGYSGSEYANYAPHYDHEHHSYPKYAFSYGVNDPHTGDIKQQYEERDGDKVRGGYSLVEPDGSIRVVEYTADDHNGFNAVVKKIGPSHHLPLTVHHSGHTMSQDTTMRRSTPTLIRCPLTSITTTRW
SIO_010081: LOC111060000
subclass of: SO_0000673
so part of: LOC111060000
location: complement(join(1218698..1218931,1221387..1221476,1250177..1251223,1273358..1273390))
location: region:1218698-1273390:-1
so has part: feature:1273358-1273390:-1:exon
so has part: feature:1250177-1251223:-1:exon
so has part: feature:1221387-1221476:-1:exon
so has part: feature:1218698-1218931:-1:exon

XP_039293323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1273358-1273390:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1250177-1251223:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1221387-1221476:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1218698-1218931:-1:exon

LOC120353623
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353623
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1318484..1319125)
location: region:1318484-1319125:-1
so has part: feature:1318484-1319125:-1:exon
subclass of: SO_0000010

120353623
type: Gene
SIO_000068: ncbigene

position:1318484:-1
position: 1318484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1319125:-1
position: 1319125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1318484-1319125:-1:exon

LOC120353623
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353623
product: uncharacterized LOC120353623
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 2 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039438164.1
SIO_010081: LOC120353623
subclass of: SO_0000673
so part of: LOC120353623
location: complement(1318484..1319125)
location: region:1318484-1319125:-1
so has part: feature:1318484-1319125:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1318484-1319125:-1:exon

LOC120353623
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353623
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120353623
translation: MFYEQLTHVFSPCLPHRTSECDVVRGECTQTYVPYLFLVIPLGPVTLTGQDYVLVESGCVCKPKYASSSSPTQGDPTAIPHTKL
SIO_010081: LOC120353623
subclass of: SO_0000673
so part of: LOC120353623
location: complement(1318871..1319125)
location: region:1318871-1319125:-1
so has part: feature:1318871-1319125:-1:exon

XP_039294098.1
type: Protein
SIO_000068: ncbiprotein

position:1318871:-1
position: 1318871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1318871-1319125:-1:exon

LOC111050797
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111050797
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1357277..1409307)
location: region:1357277-1409307:-1
so has part: feature:1357277-1409307:-1:exon
subclass of: SO_0000010

111050797
type: Gene
SIO_000068: ncbigene

position:1357277:-1
position: 1357277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1409307:-1
position: 1409307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1357277-1409307:-1:exon

LOC111050797
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111050797
product: netrin receptor UNC5C-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039438165.1
SIO_010081: LOC111050797
subclass of: SO_0000673
so part of: LOC111050797
location: complement(join(1357277..1358980,1361056..1361157,1363610..1363707,1367600..1367794,1369819..1369965,1371803..1372057,1373867..1374039,1376653..1376902,1381342..1381767,1408343..1408486,1409220..1409307))
location: region:1357277-1409307:-1
so has part: feature:1409220-1409307:-1:exon
so has part: feature:1408343-1408486:-1:exon
so has part: feature:1381342-1381767:-1:exon
so has part: feature:1376653-1376902:-1:exon
so has part: feature:1373867-1374039:-1:exon
so has part: feature:1371803-1372057:-1:exon
so has part: feature:1369819-1369965:-1:exon
so has part: feature:1367600-1367794:-1:exon
so has part: feature:1363610-1363707:-1:exon
so has part: feature:1361056-1361157:-1:exon
so has part: feature:1357277-1358980:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1409220-1409307:-1:exon

position:1409220:-1
position: 1409220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1408343-1408486:-1:exon

position:1408343:-1
position: 1408343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1408486:-1
position: 1408486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1381342-1381767:-1:exon

position:1381342:-1
position: 1381342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1381767:-1
position: 1381767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1376653-1376902:-1:exon

position:1376653:-1
position: 1376653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1376902:-1
position: 1376902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1373867-1374039:-1:exon

position:1373867:-1
position: 1373867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1374039:-1
position: 1374039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1371803-1372057:-1:exon

position:1371803:-1
position: 1371803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1372057:-1
position: 1372057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1369819-1369965:-1:exon

position:1369819:-1
position: 1369819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1369965:-1
position: 1369965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1367600-1367794:-1:exon

position:1367600:-1
position: 1367600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1367794:-1
position: 1367794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1363610-1363707:-1:exon

position:1363610:-1
position: 1363610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363707:-1
position: 1363707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1361056-1361157:-1:exon

position:1361056:-1
position: 1361056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1361157:-1
position: 1361157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1357277-1358980:-1:exon

position:1358980:-1
position: 1358980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111050797
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111050797
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: netrin receptor UNC5C-like
translation: MLPHPIVRSMLTPPHFSVFFVLQTVQRETVEVETDFALWIGLAVAICVFSCVAAIIVFSLRKKGRDHSMYNMAGHVPEYQQEYYPDDDKKHYQSLPGDAPPDVTRSLLVPLGGVHNGGVQVQIPLGGVQLPPHGGYEYPYSDAADKYMTRSCSSEHHYDVPHLNPPSGGQMGPGGAPSPLSTSGSSTHSTMESSTSPSHSHSQKNKHSSEHSLTSFTCSTPSHMDSTYEGGSNKSTSSTGVVLRGVEADCMCSSFVTVTGARLCLPDSGISLTIPEGALSRKHREQIYVAVLRDDRHRPKLTDRQTQLSPVVLTGPAGVAFKKPVILNFHHCASLTEMHQHWNITVWSSDSPPEATPVWQKVVTLGEETINTPLFAQLDQDQVYLVCDQLTRFVLVGEACPLPPLSPSLPPPCKVLTLAVFAPPHLPQDYSVRVYALEDTKAALEGVIQVERRLGGCLMDKPKTLLFQDGGANLSLSLEDIGVGWKSKPLADYQEIPFQHVWNSTHTHLHCSFTLERVDRLASSVSFRVVASQKGCQSHRQIFRVNAEVTTDSSNSSSLTPGSPIISKPCRTVTSSSGCGSSVTTCDQSPFRFSRSLRKQLCQCLDTPNSRSNDWRMLAQRLNVDRYINYFATKASPTEHILDLWEARHRESTAVTDLLNVLRIMGRNDAASLMEKELGPWL
SIO_010081: LOC111050797
subclass of: SO_0000673
so part of: LOC111050797
location: complement(join(1358809..1358980,1361056..1361157,1363610..1363707,1367600..1367794,1369819..1369965,1371803..1372057,1373867..1374039,1376653..1376902,1381342..1381767,1408343..1408486,1409220..1409307))
location: region:1358809-1409307:-1
so has part: feature:1409220-1409307:-1:exon
so has part: feature:1408343-1408486:-1:exon
so has part: feature:1381342-1381767:-1:exon
so has part: feature:1376653-1376902:-1:exon
so has part: feature:1373867-1374039:-1:exon
so has part: feature:1371803-1372057:-1:exon
so has part: feature:1369819-1369965:-1:exon
so has part: feature:1367600-1367794:-1:exon
so has part: feature:1363610-1363707:-1:exon
so has part: feature:1361056-1361157:-1:exon
so has part: feature:1358809-1358980:-1:exon

XP_039294099.1
type: Protein
SIO_000068: ncbiprotein

position:1358809:-1
position: 1358809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1409220-1409307:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1408343-1408486:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1381342-1381767:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1376653-1376902:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1373867-1374039:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1371803-1372057:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1369819-1369965:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1367600-1367794:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1363610-1363707:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1361056-1361157:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1358809-1358980:-1:exon

LOC120353624
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353624
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1420101..>1427461
location: region:1420101-1427461:1
so has part: feature:1420101-1427461:1:exon
subclass of: SO_0000010

120353624
type: Gene
SIO_000068: ncbigene

position:1420101:1
position: 1420101
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1427461:1
position: 1427461
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1420101-1427461:1:exon

LOC120353624
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353624
product: UPF0329 protein ECU05_1680/ECU11_0050-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_039438166.1
SIO_010081: LOC120353624
subclass of: SO_0000673
so part of: LOC120353624
location: join(<1420101..1420154,1422545..1422603,1422668..1422677,1422915..1422938,1427399..>1427461)
location: region:1420101-1427461:1
so has part: feature:1420101-1420154:1:exon
so has part: feature:1422545-1422603:1:exon
so has part: feature:1422668-1422677:1:exon
so has part: feature:1422915-1422938:1:exon
so has part: feature:1427399-1427461:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1420101-1420154:1:exon

position:1420154:1
position: 1420154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1422545-1422603:1:exon

position:1422545:1
position: 1422545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1422603:1
position: 1422603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1422668-1422677:1:exon

position:1422668:1
position: 1422668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1422677:1
position: 1422677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1422915-1422938:1:exon

position:1422915:1
position: 1422915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1422938:1
position: 1422938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1427399-1427461:1:exon

position:1427399:1
position: 1427399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120353624
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353624
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:1422921..1422923,aa:OTHER)
product: LOW QUALITY PROTEIN: UPF0329 protein ECU05_1680/ECU11_0050-like
translation: REHEEEKEEEEGEEEAEVKEEEEEEKKKKKKKKKKNMEVGCERXRERVRKEEKKKEKKKKKKKKKKKKKK
SIO_010081: LOC120353624
subclass of: SO_0000673
so part of: LOC120353624
location: join(<1420101..1420154,1422545..1422603,1422668..1422677,1422915..1422938,1427399..>1427461)
location: region:1420101-1427461:1
so has part: feature:1420101-1420154:1:exon
so has part: feature:1422545-1422603:1:exon
so has part: feature:1422668-1422677:1:exon
so has part: feature:1422915-1422938:1:exon
so has part: feature:1427399-1427461:1:exon

XP_039294100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1420101-1420154:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1422545-1422603:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1422668-1422677:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1422915-1422938:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1427399-1427461:1:exon

LOC111056294
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111056294
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1668495..1756269)
location: region:1668495-1756269:-1
so has part: feature:1668495-1756269:-1:exon
subclass of: SO_0000010

111056294
type: Gene
SIO_000068: ncbigene

position:1668495:-1
position: 1668495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1756269:-1
position: 1756269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1668495-1756269:-1:exon

LOC111056294
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111056294
product: netrin receptor unc-5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_022343642.2
SIO_010081: LOC111056294
subclass of: SO_0000673
so part of: LOC111056294
location: complement(join(1668495..1668559,1710217..1710410,1712385..1712607,1754983..1756269))
location: region:1668495-1756269:-1
so has part: feature:1754983-1756269:-1:exon
so has part: feature:1712385-1712607:-1:exon
so has part: feature:1710217-1710410:-1:exon
so has part: feature:1668495-1668559:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1754983-1756269:-1:exon

position:1754983:-1
position: 1754983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1712385-1712607:-1:exon

position:1712385:-1
position: 1712385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1712607:-1
position: 1712607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1710217-1710410:-1:exon

position:1710217:-1
position: 1710217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1710410:-1
position: 1710410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1668495-1668559:-1:exon

position:1668559:-1
position: 1668559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111056294
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111056294
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: netrin receptor unc-5
translation: MMANFFGLRDFCGNKRKMKSALTNWIWIAVLLLFMTAVCSSLEEDPDGDPDADDPDSDPEEHYPLLEDPLHPPSAPSNGDHSVPLPVFLEEPVDTYIIKNKPALLTCRAAHALQLYFKCQGKRLDGVHLEFVDPQTGVRNVETSVNVTRDAVEEFFGKFRCECVAWTSRGQVTSQPNTIVVACEYEIHHSLSATNVNFSTKHD
SIO_010081: LOC111056294
subclass of: SO_0000673
so part of: LOC111056294
location: complement(join(1668495..1668559,1710217..1710410,1712385..1712607,1754983..1755112))
location: region:1668495-1755112:-1
so has part: feature:1754983-1755112:-1:exon
so has part: feature:1712385-1712607:-1:exon
so has part: feature:1710217-1710410:-1:exon
so has part: feature:1668495-1668559:-1:exon

XP_022199334.2
type: Protein
SIO_000068: ncbiprotein

position:1755112:-1
position: 1755112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1754983-1755112:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1712385-1712607:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1710217-1710410:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1668495-1668559:-1:exon

Trnat-ugu
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: Trnat-ugu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 2118063..2118134
location: region:2118063-2118134:1
so has part: feature:2118063-2118134:1:exon
subclass of: SO_0000663

111061554
type: Gene
SIO_000068: ncbigene

position:2118063:1
position: 2118063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2118134:1
position: 2118134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2118063-2118134:1:exon

Trnat-ugu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 108931
gene: Trnat-ugu
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:2118095..2118097,aa:Thr,seq:tgt)
SIO_010081: Trnat-ugu
subclass of: SO_0000673
so part of: Trnat-ugu
location: 2118063..2118134
location: region:2118063-2118134:1
so has part: feature:2118063-2118134:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2118063-2118134:1:exon

LOC120353625
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353625
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2165274..2166260)
location: region:2165274-2166260:-1
so has part: feature:2165274-2166260:-1:exon
subclass of: SO_0000010

120353625
type: Gene
SIO_000068: ncbigene

position:2165274:-1
position: 2165274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2166260:-1
position: 2166260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2165274-2166260:-1:exon

LOC120353625
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353625
product: uncharacterized LOC120353625
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039438167.1
SIO_010081: LOC120353625
subclass of: SO_0000673
so part of: LOC120353625
location: complement(2165274..2166260)
location: region:2165274-2166260:-1
so has part: feature:2165274-2166260:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2165274-2166260:-1:exon

LOC120353625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353625
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120353625
translation: MKNHICVLLLVSILQAILGIKVEIQKTPNLTDINVDKKQDKREIFGYKIHENSNDFWGFDHGNEHKLLGDTYKNEGHILGDIYKSEDFSKDEGVYSTILSEHGRNLGHHGVKFEDFNHNFLQNHQSDSHIKEEFKFGDLSKPNLHHHKDQKTVTIIKKIPVPYPVHVEKKVTVPVDRPYPVPVPKPYTVTVEKHVPVPVKVPVPVKVAVPVPAPFPVEKRVPYPVKVHVEKPFPVAVPKPYPVFIEKPVPVTVIKKVPVDRPYPVHFPLEKPDFHHQTVEIPGKKHSSAGFEGRHGSYSHHINHDIKGNHEYNTGKNEEGKRGYTVHF
SIO_010081: LOC120353625
subclass of: SO_0000673
so part of: LOC120353625
location: complement(2165274..2166260)
location: region:2165274-2166260:-1
so has part: feature:2165274-2166260:-1:exon

XP_039294101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2165274-2166260:-1:exon

LOC120353516
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2169291..2173180)
location: region:2169291-2173180:-1
so has part: feature:2169291-2173180:-1:exon
subclass of: SO_0000010

120353516
type: Gene
SIO_000068: ncbigene

position:2169291:-1
position: 2169291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2173180:-1
position: 2173180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2169291-2173180:-1:exon

LOC120353516
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353516
product: uncharacterized LOC120353516
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 long SRA reads, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_039437397.1
SIO_010081: LOC120353516
subclass of: SO_0000673
so part of: LOC120353516
location: complement(join(2169291..2169410,2170020..2170120,2171486..2171666,2173035..2173180))
location: region:2169291-2173180:-1
so has part: feature:2173035-2173180:-1:exon
so has part: feature:2171486-2171666:-1:exon
so has part: feature:2170020-2170120:-1:exon
so has part: feature:2169291-2169410:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2173035-2173180:-1:exon

position:2173035:-1
position: 2173035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2171486-2171666:-1:exon

position:2171486:-1
position: 2171486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2171666:-1
position: 2171666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2170020-2170120:-1:exon

position:2170020:-1
position: 2170020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2170120:-1
position: 2170120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2169291-2169410:-1:exon

position:2169410:-1
position: 2169410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120353516
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120353516
translation: MLPYWNIWAKPGKYYEPQLISQADFTNHFVVTKHEIWQCNIEDKGKFLRSVVEYVGKTPMRTVEFYDDTPLFGSSPEMATSPEVQQSANIITGDDLRVTYKYHGLVKLIQRKQGFVRRIVDAYGNLFGNQTWQIHCGDR
SIO_010081: LOC120353516
subclass of: SO_0000673
so part of: LOC120353516
location: complement(join(2169399..2169410,2170020..2170120,2171486..2171666,2173035..2173160))
location: region:2169399-2173160:-1
so has part: feature:2173035-2173160:-1:exon
so has part: feature:2171486-2171666:-1:exon
so has part: feature:2170020-2170120:-1:exon
so has part: feature:2169399-2169410:-1:exon

XP_039293331.1
type: Protein
SIO_000068: ncbiprotein

position:2169399:-1
position: 2169399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2173160:-1
position: 2173160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2173035-2173160:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2171486-2171666:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2170020-2170120:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2169399-2169410:-1:exon

LOC120353626
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353626
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2175830..2189432)
location: region:2175830-2189432:-1
so has part: feature:2175830-2189432:-1:exon
subclass of: SO_0000010

120353626
type: Gene
SIO_000068: ncbigene

position:2175830:-1
position: 2175830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2189432:-1
position: 2189432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2175830-2189432:-1:exon

LOC120353626
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353626
product: uncharacterized LOC120353626
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_039438168.1
SIO_010081: LOC120353626
subclass of: SO_0000673
so part of: LOC120353626
location: complement(join(2175830..2176025,2177012..2177057,2178990..2179197,2182918..2183081,2187261..2187488,2189305..2189432))
location: region:2175830-2189432:-1
so has part: feature:2189305-2189432:-1:exon
so has part: feature:2187261-2187488:-1:exon
so has part: feature:2182918-2183081:-1:exon
so has part: feature:2178990-2179197:-1:exon
so has part: feature:2177012-2177057:-1:exon
so has part: feature:2175830-2176025:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2189305-2189432:-1:exon

position:2189305:-1
position: 2189305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2187261-2187488:-1:exon

position:2187261:-1
position: 2187261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2187488:-1
position: 2187488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2182918-2183081:-1:exon

position:2182918:-1
position: 2182918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2183081:-1
position: 2183081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2178990-2179197:-1:exon

position:2178990:-1
position: 2178990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2179197:-1
position: 2179197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2177012-2177057:-1:exon

position:2177012:-1
position: 2177012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2177057:-1
position: 2177057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2175830-2176025:-1:exon

position:2176025:-1
position: 2176025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120353626
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353626
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120353626
translation: MFMMSLCVREICQKTLTNQKYETKMYDYRRGKTVPFNVIGEAPVTSLFVITNKEVWQCTVKAQRPGYESYQCTRVVTELVSKEIIGQLYFFDGTEVVTIPIPSTGEQKPNTAVVKEIKYLHPETNAVLKYDGYLEFFEPEDSPHQGVFERLGRERVPGEGEVEDYQRDVFYRTEVPESFHINHHNPEDGHIFTDDQKPYGGIGSVEDRAM
SIO_010081: LOC120353626
subclass of: SO_0000673
so part of: LOC120353626
location: complement(join(2175830..2176025,2177012..2177057,2178990..2179197,2182918..2183081,2187261..2187279))
location: region:2175830-2187279:-1
so has part: feature:2187261-2187279:-1:exon
so has part: feature:2182918-2183081:-1:exon
so has part: feature:2178990-2179197:-1:exon
so has part: feature:2177012-2177057:-1:exon
so has part: feature:2175830-2176025:-1:exon

XP_039294102.1
type: Protein
SIO_000068: ncbiprotein

position:2187279:-1
position: 2187279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2187261-2187279:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2182918-2183081:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2178990-2179197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2177012-2177057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2175830-2176025:-1:exon

LOC111063558
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111063558
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2192973..2194366)
location: region:2192973-2194366:-1
so has part: feature:2192973-2194366:-1:exon
subclass of: SO_0000010

111063558
type: Gene
SIO_000068: ncbigene

position:2192973:-1
position: 2192973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2194366:-1
position: 2194366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2192973-2194366:-1:exon

LOC111063558
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111063558
product: uncharacterized LOC111063558
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_022351248.2
SIO_010081: LOC111063558
subclass of: SO_0000673
so part of: LOC111063558
location: complement(2192973..2194366)
location: region:2192973-2194366:-1
so has part: feature:2192973-2194366:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2192973-2194366:-1:exon

LOC111063558
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111063558
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111063558
translation: MKLVLVFLSVLGLIFVEGTNIGGRKSDKKEGGNDKSSGLKLDIVGGTNSEVEKSEKTVGGDDKTQFKRGLVDEGQYGTSFHGQYGEKTVVNDDKSQFKRGLVDGGQYGTSFHGQYVGKTMVNDDKTQFKRGLFEDGLYGGGFYQQSGGFGGYAVGEQVSEHKTISITKEIPVPYPVTVEKKIPYPVDRPYTVHIPKPYTVHVEKPIPYPVKVPVPQPYTVLKPVPYTVHVPVDRPYTVHVPQPYKVYVDKPYPVEVIKKYAVPVEYPVDRPYTVPVPVDKPVPYTVEKPVAYPVKVPVDRPFTVDVPQPYPVEVEKKVPVPYQVPVKVDEGHLGEHH
SIO_010081: LOC111063558
subclass of: SO_0000673
so part of: LOC111063558
location: complement(2193337..2194350)
location: region:2193337-2194350:-1
so has part: feature:2193337-2194350:-1:exon

XP_022206940.2
type: Protein
SIO_000068: ncbiprotein

position:2193337:-1
position: 2193337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2194350:-1
position: 2194350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2193337-2194350:-1:exon

LOC111061137
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111061137
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2196864..2214862
location: region:2196864-2214862:1
so has part: feature:2196864-2214862:1:exon
subclass of: SO_0000010

111061137
type: Gene
SIO_000068: ncbigene

position:2196864:1
position: 2196864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2214862:1
position: 2214862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2196864-2214862:1:exon

LOC111061137
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111061137
product: uncharacterized LOC111061137, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_039437392.1
SIO_010081: LOC111061137
subclass of: SO_0000673
so part of: LOC111061137
location: join(2196864..2196997,2198267..2198488,2200526..2200688,2202592..2202784,2207479..2207530,2208005..2208187,2209171..2209345,2212146..2212326,2214170..2214293,2214614..2214862)
location: region:2196864-2214862:1
so has part: feature:2196864-2196997:1:exon
so has part: feature:2198267-2198488:1:exon
so has part: feature:2200526-2200688:1:exon
so has part: feature:2202592-2202784:1:exon
so has part: feature:2207479-2207530:1:exon
so has part: feature:2208005-2208187:1:exon
so has part: feature:2209171-2209345:1:exon
so has part: feature:2212146-2212326:1:exon
so has part: feature:2214170-2214293:1:exon
so has part: feature:2214614-2214862:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2196864-2196997:1:exon

position:2196997:1
position: 2196997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2198267-2198488:1:exon

position:2198267:1
position: 2198267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2198488:1
position: 2198488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2200526-2200688:1:exon

position:2200526:1
position: 2200526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2200688:1
position: 2200688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2202592-2202784:1:exon

position:2202592:1
position: 2202592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2202784:1
position: 2202784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2207479-2207530:1:exon

position:2207479:1
position: 2207479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2207530:1
position: 2207530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2208005-2208187:1:exon

position:2208005:1
position: 2208005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2208187:1
position: 2208187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2209171-2209345:1:exon

position:2209171:1
position: 2209171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2209345:1
position: 2209345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2212146-2212326:1:exon

position:2212146:1
position: 2212146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2212326:1
position: 2212326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2214170-2214293:1:exon

position:2214170:1
position: 2214170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2214293:1
position: 2214293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2214614-2214862:1:exon

position:2214614:1
position: 2214614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111061137
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111061137
product: uncharacterized LOC111061137, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_039437393.1
SIO_010081: LOC111061137
subclass of: SO_0000673
so part of: LOC111061137
location: join(2196864..2196997,2198267..2198488,2200526..2200688,2202592..2202784,2205705..2205756,2208005..2208187,2209171..2209345,2212146..2212326,2214170..2214293,2214614..2214849)
location: region:2196864-2214849:1
so has part: feature:2196864-2196997:1:exon
so has part: feature:2198267-2198488:1:exon
so has part: feature:2200526-2200688:1:exon
so has part: feature:2202592-2202784:1:exon
so has part: feature:2205705-2205756:1:exon
so has part: feature:2208005-2208187:1:exon
so has part: feature:2209171-2209345:1:exon
so has part: feature:2212146-2212326:1:exon
so has part: feature:2214170-2214293:1:exon
so has part: feature:2214614-2214849:1:exon

position:2214849:1
position: 2214849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2196864-2196997:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2198267-2198488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2200526-2200688:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2202592-2202784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2205705-2205756:1:exon

position:2205705:1
position: 2205705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2205756:1
position: 2205756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2208005-2208187:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2209171-2209345:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2212146-2212326:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2214170-2214293:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2214614-2214849:1:exon

LOC111061137
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111061137
product: uncharacterized LOC111061137, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_039437395.1
SIO_010081: LOC111061137
subclass of: SO_0000673
so part of: LOC111061137
location: join(2196864..2196997,2198267..2198488,2200526..2200688,2202700..2202784,2207479..2207530,2208005..2208187,2209171..2209345,2212146..2212326,2214170..2214293,2214614..2214849)
location: region:2196864-2214849:1
so has part: feature:2196864-2196997:1:exon
so has part: feature:2198267-2198488:1:exon
so has part: feature:2200526-2200688:1:exon
so has part: feature:2202700-2202784:1:exon
so has part: feature:2207479-2207530:1:exon
so has part: feature:2208005-2208187:1:exon
so has part: feature:2209171-2209345:1:exon
so has part: feature:2212146-2212326:1:exon
so has part: feature:2214170-2214293:1:exon
so has part: feature:2214614-2214849:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2196864-2196997:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2198267-2198488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2200526-2200688:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2202700-2202784:1:exon

position:2202700:1
position: 2202700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2207479-2207530:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2208005-2208187:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2209171-2209345:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2212146-2212326:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2214170-2214293:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2214614-2214849:1:exon

LOC111061137
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111061137
product: uncharacterized LOC111061137, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_039437394.1
SIO_010081: LOC111061137
subclass of: SO_0000673
so part of: LOC111061137
location: join(2196933..2196997,2198288..2198488,2200526..2200688,2202592..2202784,2207479..2207530,2208005..2208187,2209171..2209345,2212146..2212326,2214170..2214293,2214614..2214847)
location: region:2196933-2214847:1
so has part: feature:2196933-2196997:1:exon
so has part: feature:2198288-2198488:1:exon
so has part: feature:2200526-2200688:1:exon
so has part: feature:2202592-2202784:1:exon
so has part: feature:2207479-2207530:1:exon
so has part: feature:2208005-2208187:1:exon
so has part: feature:2209171-2209345:1:exon
so has part: feature:2212146-2212326:1:exon
so has part: feature:2214170-2214293:1:exon
so has part: feature:2214614-2214847:1:exon

position:2196933:1
position: 2196933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2214847:1
position: 2214847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2196933-2196997:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2198288-2198488:1:exon

position:2198288:1
position: 2198288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2200526-2200688:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2202592-2202784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2207479-2207530:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2208005-2208187:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2209171-2209345:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2212146-2212326:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2214170-2214293:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2214614-2214847:1:exon

LOC111061137
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111061137
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111061137 isoform X2
translation: MYSIALVLVLTILKNAGNSANACSLLPGGVPKCFPDAVDYETEASDSKLKEIKYRLDKKHIFGYDTNKGRRDVRLGKYWEKSIGKKSDVVQCAKDVSDNAYLPSYNTYMYDYYRDADRQVKGESPVTTLFLITKKEVWDCENTDKQIKFKRIVTEMVSREALGSIFFFDGIEVTTNPQTFQEIDNRLDMTIAREVKYIDAEDDNKVVRYDGHLKFRKTYWTNNHDSSVFKPVDGVYEEAINEQDFHQDVSNPLIEQKNYFDFSNPQGTGLEDLHRPYGQIGCSQNQARCTIQDDDKRLYKLDYLLPHWAERKFGKGGYRQHKIHPYEFTDNFIVTKHEIWSCIMLHSGEKFERQVVEYIGTKSVRTIDCFNGNKVWQYNIGDRQRGVAVRAIFYNTEEEHYQRKIYAGTLKLDEIVEEEKPKKKKSFWRLICNLFSSEEDMPEDQYKLRFDENDDSYIFNRPRS
SIO_010081: LOC111061137
subclass of: SO_0000673
so part of: LOC111061137
location: join(2196948..2196997,2198267..2198488,2200526..2200688,2202592..2202784,2205705..2205756,2208005..2208187,2209171..2209345,2212146..2212326,2214170..2214293,2214614..2214665)
location: region:2196948-2214665:1
so has part: feature:2196948-2196997:1:exon
so has part: feature:2198267-2198488:1:exon
so has part: feature:2200526-2200688:1:exon
so has part: feature:2202592-2202784:1:exon
so has part: feature:2205705-2205756:1:exon
so has part: feature:2208005-2208187:1:exon
so has part: feature:2209171-2209345:1:exon
so has part: feature:2212146-2212326:1:exon
so has part: feature:2214170-2214293:1:exon
so has part: feature:2214614-2214665:1:exon

XP_039293327.1
type: Protein
SIO_000068: ncbiprotein

position:2196948:1
position: 2196948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2214665:1
position: 2214665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2196948-2196997:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2198267-2198488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2200526-2200688:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2202592-2202784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2205705-2205756:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2208005-2208187:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2209171-2209345:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2212146-2212326:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2214170-2214293:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2214614-2214665:1:exon

LOC111061137
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111061137
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111061137 isoform X1
translation: MYSIALVLVLTILKNAGNSANACSLLPGGVPKCFPDAVDYETEASDSKLKEIKYRLDKKHIFGYDTNKGRRDVRLGKYWEKSIGKKSDVVQCAKDVSDNAYLPSYNTYMYDYYRDADRQVKGESPVTTLFLITKKEVWDCENTDKQIKFKRIVTEMVSREALGSIFFFDGIEVTTNPQTFQEIDNRLDMTIAREVKYIDAEDDNKVVRYDGHLKFGKTYWTNNHDSSVFKPVDGVYEEAINEQDFHQDVSNPLIEQKNYFDFSNPQGTGLEDLHRPYGQIGCSQNQARCTIQDDDKRLYKLDYLLPHWAERKFGKGGYRQHKIHPYEFTDNFIVTKHEIWSCIMLHSGEKFERQVVEYIGTKSVRTIDCFNGNKVWQYNIGDRQRGVAVRAIFYNTEEEHYQRKIYAGTLKLDEIVEEEKPKKKKSFWRLICNLFSSEEDMPEDQYKLRFDENDDSYIFNRPRS
SIO_010081: LOC111061137
subclass of: SO_0000673
so part of: LOC111061137
location: join(2196948..2196997,2198267..2198488,2200526..2200688,2202592..2202784,2207479..2207530,2208005..2208187,2209171..2209345,2212146..2212326,2214170..2214293,2214614..2214665)
location: region:2196948-2214665:1
so has part: feature:2196948-2196997:1:exon
so has part: feature:2198267-2198488:1:exon
so has part: feature:2200526-2200688:1:exon
so has part: feature:2202592-2202784:1:exon
so has part: feature:2207479-2207530:1:exon
so has part: feature:2208005-2208187:1:exon
so has part: feature:2209171-2209345:1:exon
so has part: feature:2212146-2212326:1:exon
so has part: feature:2214170-2214293:1:exon
so has part: feature:2214614-2214665:1:exon

XP_039293326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2196948-2196997:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2198267-2198488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2200526-2200688:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2202592-2202784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2207479-2207530:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2208005-2208187:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2209171-2209345:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2212146-2212326:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2214170-2214293:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2214614-2214665:1:exon

LOC111061137
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111061137
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111061137 isoform X4
translation: MYSIALVLVLTILKNAGNSANACSLLPGGVPKCFPDAVDYETEASDSKLKEIKYRLDKKHIFGYDTNKGRRDVRLGKYWEKSIGKKSDVVQCAKDVSDNAYLPSYNTYMYDYYRDADRQVKGESPVTTLFLITKKEVWDCENTDKEIDNRLDMTIAREVKYIDAEDDNKVVRYDGHLKFGKTYWTNNHDSSVFKPVDGVYEEAINEQDFHQDVSNPLIEQKNYFDFSNPQGTGLEDLHRPYGQIGCSQNQARCTIQDDDKRLYKLDYLLPHWAERKFGKGGYRQHKIHPYEFTDNFIVTKHEIWSCIMLHSGEKFERQVVEYIGTKSVRTIDCFNGNKVWQYNIGDRQRGVAVRAIFYNTEEEHYQRKIYAGTLKLDEIVEEEKPKKKKSFWRLICNLFSSEEDMPEDQYKLRFDENDDSYIFNRPRS
SIO_010081: LOC111061137
subclass of: SO_0000673
so part of: LOC111061137
location: join(2196948..2196997,2198267..2198488,2200526..2200688,2202700..2202784,2207479..2207530,2208005..2208187,2209171..2209345,2212146..2212326,2214170..2214293,2214614..2214665)
location: region:2196948-2214665:1
so has part: feature:2196948-2196997:1:exon
so has part: feature:2198267-2198488:1:exon
so has part: feature:2200526-2200688:1:exon
so has part: feature:2202700-2202784:1:exon
so has part: feature:2207479-2207530:1:exon
so has part: feature:2208005-2208187:1:exon
so has part: feature:2209171-2209345:1:exon
so has part: feature:2212146-2212326:1:exon
so has part: feature:2214170-2214293:1:exon
so has part: feature:2214614-2214665:1:exon

XP_039293329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2196948-2196997:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2198267-2198488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2200526-2200688:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2202700-2202784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2207479-2207530:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2208005-2208187:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2209171-2209345:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2212146-2212326:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2214170-2214293:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2214614-2214665:1:exon

LOC111061137
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111061137
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111061137 isoform X3
translation: MYSIALVLVLTILKNAGLLPGGVPKCFPDAVDYETEASDSKLKEIKYRLDKKHIFGYDTNKGRRDVRLGKYWEKSIGKKSDVVQCAKDVSDNAYLPSYNTYMYDYYRDADRQVKGESPVTTLFLITKKEVWDCENTDKQIKFKRIVTEMVSREALGSIFFFDGIEVTTNPQTFQEIDNRLDMTIAREVKYIDAEDDNKVVRYDGHLKFGKTYWTNNHDSSVFKPVDGVYEEAINEQDFHQDVSNPLIEQKNYFDFSNPQGTGLEDLHRPYGQIGCSQNQARCTIQDDDKRLYKLDYLLPHWAERKFGKGGYRQHKIHPYEFTDNFIVTKHEIWSCIMLHSGEKFERQVVEYIGTKSVRTIDCFNGNKVWQYNIGDRQRGVAVRAIFYNTEEEHYQRKIYAGTLKLDEIVEEEKPKKKKSFWRLICNLFSSEEDMPEDQYKLRFDENDDSYIFNRPRS
SIO_010081: LOC111061137
subclass of: SO_0000673
so part of: LOC111061137
location: join(2196948..2196997,2198288..2198488,2200526..2200688,2202592..2202784,2207479..2207530,2208005..2208187,2209171..2209345,2212146..2212326,2214170..2214293,2214614..2214665)
location: region:2196948-2214665:1
so has part: feature:2196948-2196997:1:exon
so has part: feature:2198288-2198488:1:exon
so has part: feature:2200526-2200688:1:exon
so has part: feature:2202592-2202784:1:exon
so has part: feature:2207479-2207530:1:exon
so has part: feature:2208005-2208187:1:exon
so has part: feature:2209171-2209345:1:exon
so has part: feature:2212146-2212326:1:exon
so has part: feature:2214170-2214293:1:exon
so has part: feature:2214614-2214665:1:exon

XP_039293328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2196948-2196997:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2198288-2198488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2200526-2200688:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2202592-2202784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2207479-2207530:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2208005-2208187:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2209171-2209345:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2212146-2212326:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2214170-2214293:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2214614-2214665:1:exon

LOC111059982
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111059982
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2215893..2220702)
location: region:2215893-2220702:-1
so has part: feature:2215893-2220702:-1:exon
subclass of: SO_0000010

111059982
type: Gene
SIO_000068: ncbigene

position:2215893:-1
position: 2215893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2220702:-1
position: 2220702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2215893-2220702:-1:exon

LOC111059982
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111059982
product: tetra-peptide repeat homeobox protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 48 long SRA reads, 19 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_039437396.1
SIO_010081: LOC111059982
subclass of: SO_0000673
so part of: LOC111059982
location: complement(join(2215893..2216173,2217595..2217792,2220115..2220702))
location: region:2215893-2220702:-1
so has part: feature:2220115-2220702:-1:exon
so has part: feature:2217595-2217792:-1:exon
so has part: feature:2215893-2216173:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2220115-2220702:-1:exon

position:2220115:-1
position: 2220115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2217595-2217792:-1:exon

position:2217595:-1
position: 2217595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2217792:-1
position: 2217792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2215893-2216173:-1:exon

position:2216173:-1
position: 2216173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111059982
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111059982
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetra-peptide repeat homeobox protein 1
translation: MRLLVSLVLCAGFTLGEEPVKKTDNELTGNQLNNVDNDSKKQGKRELYDLGNYGHGFGYDSFGLDHHSFGGFDHGFGHHFPHHEVHKTVTLTKEVPVPYPVHIEKKIPVPVDRPYPVHVPKPYPVHVEKHVPVPVKVPVPAPYPVEKPVPYPVKVPVDRPYPVHVPKPYPVYVDKPYPVPVEKHVPVPVKVPVDRPYPVHVPVEKPVPYPVEKPVPYPVKVPVDRPYPVHVPKPYPVHVEKQVAVPYPVPYAVKEHHGHHGHGFFDHGFALGEHL
SIO_010081: LOC111059982
subclass of: SO_0000673
so part of: LOC111059982
location: complement(join(2216006..2216173,2217595..2217792,2220115..2220576))
location: region:2216006-2220576:-1
so has part: feature:2220115-2220576:-1:exon
so has part: feature:2217595-2217792:-1:exon
so has part: feature:2216006-2216173:-1:exon

XP_039293330.1
type: Protein
SIO_000068: ncbiprotein

position:2216006:-1
position: 2216006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2220576:-1
position: 2220576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2220115-2220576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2217595-2217792:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2216006-2216173:-1:exon

LOC111050076
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111050076
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2403228..2412695)
location: region:2403228-2412695:-1
so has part: feature:2403228-2412695:-1:exon
subclass of: SO_0000010

111050076
type: Gene
SIO_000068: ncbigene

position:2403228:-1
position: 2403228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2412695:-1
position: 2412695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2403228-2412695:-1:exon

LOC111050076
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111050076
product: uncharacterized LOC111050076
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_039437401.1
SIO_010081: LOC111050076
subclass of: SO_0000673
so part of: LOC111050076
location: complement(join(2403228..2404304,2412320..2412380,2412483..2412695))
location: region:2403228-2412695:-1
so has part: feature:2412483-2412695:-1:exon
so has part: feature:2412320-2412380:-1:exon
so has part: feature:2403228-2404304:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2412483-2412695:-1:exon

position:2412483:-1
position: 2412483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2412320-2412380:-1:exon

position:2412320:-1
position: 2412320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2412380:-1
position: 2412380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2403228-2404304:-1:exon

position:2404304:-1
position: 2404304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111050076
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111050076
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111050076
translation: MKVLLFEVDTRLRNKCVAWCLFAQYALMNREISAMRRSTGFELGEYVEVRDIFISARSSILFHGLLQKYDALSDRMRLGFPTCGVHLFTMQFARTSLLAYRWERTWCI
SIO_010081: LOC111050076
subclass of: SO_0000673
so part of: LOC111050076
location: complement(join(2404045..2404304,2412320..2412380,2412483..2412488))
location: region:2404045-2412488:-1
so has part: feature:2412483-2412488:-1:exon
so has part: feature:2412320-2412380:-1:exon
so has part: feature:2404045-2404304:-1:exon

XP_039293335.1
type: Protein
SIO_000068: ncbiprotein

position:2404045:-1
position: 2404045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2412488:-1
position: 2412488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2412483-2412488:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2412320-2412380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2404045-2404304:-1:exon

LOC120353517
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353517
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2409979..2412013
location: region:2409979-2412013:1
so has part: feature:2409979-2412013:1:exon
subclass of: SO_0000010

120353517
type: Gene
SIO_000068: ncbigene

position:2409979:1
position: 2409979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2412013:1
position: 2412013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2409979-2412013:1:exon

LOC120353517
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353517
product: uncharacterized LOC120353517, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_039437400.1
SIO_010081: LOC120353517
subclass of: SO_0000673
so part of: LOC120353517
location: join(2409979..2411300,2411385..2412013)
location: region:2409979-2412013:1
so has part: feature:2409979-2411300:1:exon
so has part: feature:2411385-2412013:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2409979-2411300:1:exon

position:2411300:1
position: 2411300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2411385-2412013:1:exon

position:2411385:1
position: 2411385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120353517
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353517
product: uncharacterized LOC120353517, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_039437399.1
SIO_010081: LOC120353517
subclass of: SO_0000673
so part of: LOC120353517
location: join(2409979..2411286,2411371..2412013)
location: region:2409979-2412013:1
so has part: feature:2409979-2411286:1:exon
so has part: feature:2411371-2412013:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2409979-2411286:1:exon

position:2411286:1
position: 2411286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2411371-2412013:1:exon

position:2411371:1
position: 2411371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120353517
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353517
product: uncharacterized LOC120353517, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_039437398.1
SIO_010081: LOC120353517
subclass of: SO_0000673
so part of: LOC120353517
location: join(2409979..2411239,2411324..2412013)
location: region:2409979-2412013:1
so has part: feature:2409979-2411239:1:exon
so has part: feature:2411324-2412013:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2409979-2411239:1:exon

position:2411239:1
position: 2411239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2411324-2412013:1:exon

position:2411324:1
position: 2411324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120353517
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353517
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120353517 isoform X3
translation: MGRKTPVSTGRTTCRIGGTPTARPGDGNARGRHRTTDCMTDYRRKEACTARPGGGKSSGRKRSTARDDGGRMPVSNARGGFRTETRMEDRRSTACIRGTSALKQKISDVTGKMDIINGMKLELLEGLIGIHTGIKTELKGKLRLKHAWMIIIKWTIYGG
SIO_010081: LOC120353517
subclass of: SO_0000673
so part of: LOC120353517
location: join(2411149..2411300,2411385..2411712)
location: region:2411149-2411712:1
so has part: feature:2411149-2411300:1:exon
so has part: feature:2411385-2411712:1:exon

XP_039293334.1
type: Protein
SIO_000068: ncbiprotein

position:2411149:1
position: 2411149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2411712:1
position: 2411712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2411149-2411300:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2411385-2411712:1:exon

LOC120353517
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353517
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120353517 isoform X2
translation: MGRKTPVSTGRTTCRIGGTPTARPGDGNARGRHRTTDCMTDYRRKEACTARPGGGKSSGRKRSTARDDGGRMPVSNARGGFRTETRMEDRRSTACIRGTSALKQKISDVTGKMDIINGMKLELLEGLIGIHTGIKTELKGKLRLKHAWMIIIKWTIYGG
SIO_010081: LOC120353517
subclass of: SO_0000673
so part of: LOC120353517
location: join(2411149..2411286,2411371..2411712)
location: region:2411149-2411712:1
so has part: feature:2411149-2411286:1:exon
so has part: feature:2411371-2411712:1:exon

XP_039293333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2411149-2411286:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2411371-2411712:1:exon

LOC120353517
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353517
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120353517 isoform X1
translation: MGRKTPVSTGRTTCRIGGTPTARPGDGNARGRHRTTDCMTDYRRKEACTARPGGGKSSGRKRSTARDDGGRMPVSNARGGFRTETRMEDRRSTACIRGTSALKQKISDVTGKMDIINGMKLELLEGLIGIHTGIKTELKGKLRLKHAWMIIIKWTIYGG
SIO_010081: LOC120353517
subclass of: SO_0000673
so part of: LOC120353517
location: join(2411149..2411239,2411324..2411712)
location: region:2411149-2411712:1
so has part: feature:2411149-2411239:1:exon
so has part: feature:2411324-2411712:1:exon

XP_039293332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2411149-2411239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2411324-2411712:1:exon

LOC111048877
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111048877
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2446895..2464122)
location: region:2446895-2464122:-1
so has part: feature:2446895-2464122:-1:exon
subclass of: SO_0000011

111048877
type: Gene
SIO_000068: ncbigene

position:2446895:-1
position: 2446895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2464122:-1
position: 2464122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2446895-2464122:-1:exon

LOC111048877
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC111048877
product: uncharacterized LOC111048877
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 430 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XR_005572430.1
SIO_010081: LOC111048877
subclass of: SO_0000673
so part of: LOC111048877
location: complement(join(2446895..2447149,2448040..2448169,2452958..2453043,2456091..2456297,2459268..2459510,2463146..2463233,2463822..2464122))
location: region:2446895-2464122:-1
so has part: feature:2463822-2464122:-1:exon
so has part: feature:2463146-2463233:-1:exon
so has part: feature:2459268-2459510:-1:exon
so has part: feature:2456091-2456297:-1:exon
so has part: feature:2452958-2453043:-1:exon
so has part: feature:2448040-2448169:-1:exon
so has part: feature:2446895-2447149:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2463822-2464122:-1:exon

position:2463822:-1
position: 2463822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2463146-2463233:-1:exon

position:2463146:-1
position: 2463146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2463233:-1
position: 2463233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2459268-2459510:-1:exon

position:2459268:-1
position: 2459268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2459510:-1
position: 2459510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2456091-2456297:-1:exon

position:2456091:-1
position: 2456091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2456297:-1
position: 2456297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2452958-2453043:-1:exon

position:2452958:-1
position: 2452958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2453043:-1
position: 2453043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2448040-2448169:-1:exon

position:2448040:-1
position: 2448040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2448169:-1
position: 2448169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2446895-2447149:-1:exon

position:2447149:-1
position: 2447149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120353518
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353518
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2474956..2486489
location: region:2474956-2486489:1
so has part: feature:2474956-2486489:1:exon
subclass of: SO_0000010

120353518
type: Gene
SIO_000068: ncbigene

position:2474956:1
position: 2474956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2486489:1
position: 2486489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2474956-2486489:1:exon

LOC120353518
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353518
product: uncharacterized LOC120353518
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_039437402.1
SIO_010081: LOC120353518
subclass of: SO_0000673
so part of: LOC120353518
location: join(2474956..2475372,2477951..2478188,2479590..2479745,2480714..2480799,2484487..2484613,2486103..2486489)
location: region:2474956-2486489:1
so has part: feature:2474956-2475372:1:exon
so has part: feature:2477951-2478188:1:exon
so has part: feature:2479590-2479745:1:exon
so has part: feature:2480714-2480799:1:exon
so has part: feature:2484487-2484613:1:exon
so has part: feature:2486103-2486489:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2474956-2475372:1:exon

position:2475372:1
position: 2475372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2477951-2478188:1:exon

position:2477951:1
position: 2477951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2478188:1
position: 2478188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2479590-2479745:1:exon

position:2479590:1
position: 2479590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2479745:1
position: 2479745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2480714-2480799:1:exon

position:2480714:1
position: 2480714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2480799:1
position: 2480799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2484487-2484613:1:exon

position:2484487:1
position: 2484487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2484613:1
position: 2484613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2486103-2486489:1:exon

position:2486103:1
position: 2486103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120353518
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353518
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120353518
translation: MYELEGDSYNRKHIDDESVDDRLESSSMKPEDEDNDDSLTYKRISDTDPNKRFEYIIGGVIIGVQEGAFLYSVILGLLFGFGANFNLFLLIGAYFDISLPIVIWLAGQTLFLLFVDLSLLAAAFYSANIFLIQSLKFGFNLYCLLVVRSHLHFLNQSVKSKSIQAV
SIO_010081: LOC120353518
subclass of: SO_0000673
so part of: LOC120353518
location: join(2478146..2478188,2479590..2479745,2480714..2480799,2484487..2484613,2486103..2486191)
location: region:2478146-2486191:1
so has part: feature:2478146-2478188:1:exon
so has part: feature:2479590-2479745:1:exon
so has part: feature:2480714-2480799:1:exon
so has part: feature:2484487-2484613:1:exon
so has part: feature:2486103-2486191:1:exon

XP_039293336.1
type: Protein
SIO_000068: ncbiprotein

position:2478146:1
position: 2478146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2486191:1
position: 2486191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2478146-2478188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2479590-2479745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2480714-2480799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2484487-2484613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2486103-2486191:1:exon

LOC111055859
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111055859
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2496484..2514217
location: region:2496484-2514217:1
so has part: feature:2496484-2514217:1:exon
subclass of: SO_0000010

111055859
type: Gene
SIO_000068: ncbigene

position:2496484:1
position: 2496484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2514217:1
position: 2514217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2496484-2514217:1:exon

LOC111055859
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111055859
product: uncharacterized LOC111055859
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 273 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_039437404.1
SIO_010081: LOC111055859
subclass of: SO_0000673
so part of: LOC111055859
location: join(2496484..2496859,2506581..2506668,2507729..2508185,2509898..2509983,2511682..2511814,2513950..2514217)
location: region:2496484-2514217:1
so has part: feature:2496484-2496859:1:exon
so has part: feature:2506581-2506668:1:exon
so has part: feature:2507729-2508185:1:exon
so has part: feature:2509898-2509983:1:exon
so has part: feature:2511682-2511814:1:exon
so has part: feature:2513950-2514217:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2496484-2496859:1:exon

position:2496859:1
position: 2496859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2506581-2506668:1:exon

position:2506581:1
position: 2506581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2506668:1
position: 2506668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2507729-2508185:1:exon

position:2507729:1
position: 2507729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2508185:1
position: 2508185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2509898-2509983:1:exon

position:2509898:1
position: 2509898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2509983:1
position: 2509983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2511682-2511814:1:exon

position:2511682:1
position: 2511682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2511814:1
position: 2511814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2513950-2514217:1:exon

position:2513950:1
position: 2513950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111055859
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111055859
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111055859
translation: MDFSMKSMKRLFKKAFCKWSLRKVTLIIGWFNFITSFIPFLALIIYAINGAKGIDEFLYGAMKNYDENLYDKNPERLKFLKTIAGFISTHKLLKFLKDYEQDYSRSVYLVGLDRVLAYDNNQFGNSYPFINEWYKSKSSTPDKMDDYVGSYQWSSWNTEPTVILEDFVGSEVTEIVHRILFAVAGDSTFFLILVGSILGIGVTSNAWLLFGAHTDSGPMIAVWLAGQIFILVFDVSLLVCIAIYSSDFPLLVIQFTRICFGLYSIIVVHRYYHKLYYDQKQQAIDNAAIESQDPNFFRSNIENFRPTLTSSDMEKCSTLSY
SIO_010081: LOC111055859
subclass of: SO_0000673
so part of: LOC111055859
location: join(2496849..2496859,2506581..2506668,2507729..2508185,2509898..2509983,2511682..2511814,2513950..2514140)
location: region:2496849-2514140:1
so has part: feature:2496849-2496859:1:exon
so has part: feature:2506581-2506668:1:exon
so has part: feature:2507729-2508185:1:exon
so has part: feature:2509898-2509983:1:exon
so has part: feature:2511682-2511814:1:exon
so has part: feature:2513950-2514140:1:exon

XP_039293338.1
type: Protein
SIO_000068: ncbiprotein

position:2496849:1
position: 2496849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2514140:1
position: 2514140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2496849-2496859:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2506581-2506668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2507729-2508185:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2509898-2509983:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2511682-2511814:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2513950-2514140:1:exon

LOC111055861
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111055861
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2533215..2549818)
location: region:2533215-2549818:-1
so has part: feature:2533215-2549818:-1:exon
subclass of: SO_0000010

111055861
type: Gene
SIO_000068: ncbigene

position:2533215:-1
position: 2533215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2549818:-1
position: 2549818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2533215-2549818:-1:exon

LOC111055861
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111055861
product: telomere zinc finger-associated protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_039437405.1
SIO_010081: LOC111055861
subclass of: SO_0000673
so part of: LOC111055861
location: complement(join(2533215..2533888,2534085..2534252,2536183..2536299,2538128..2538373,2539281..2539468,2540299..2540437,2541493..2541595,2542690..2542848,2543787..2543900,2546376..2546709,2549491..2549818))
location: region:2533215-2549818:-1
so has part: feature:2549491-2549818:-1:exon
so has part: feature:2546376-2546709:-1:exon
so has part: feature:2543787-2543900:-1:exon
so has part: feature:2542690-2542848:-1:exon
so has part: feature:2541493-2541595:-1:exon
so has part: feature:2540299-2540437:-1:exon
so has part: feature:2539281-2539468:-1:exon
so has part: feature:2538128-2538373:-1:exon
so has part: feature:2536183-2536299:-1:exon
so has part: feature:2534085-2534252:-1:exon
so has part: feature:2533215-2533888:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2549491-2549818:-1:exon

position:2549491:-1
position: 2549491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2546376-2546709:-1:exon

position:2546376:-1
position: 2546376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2546709:-1
position: 2546709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2543787-2543900:-1:exon

position:2543787:-1
position: 2543787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2543900:-1
position: 2543900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2542690-2542848:-1:exon

position:2542690:-1
position: 2542690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2542848:-1
position: 2542848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2541493-2541595:-1:exon

position:2541493:-1
position: 2541493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2541595:-1
position: 2541595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2540299-2540437:-1:exon

position:2540299:-1
position: 2540299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2540437:-1
position: 2540437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2539281-2539468:-1:exon

position:2539281:-1
position: 2539281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2539468:-1
position: 2539468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2538128-2538373:-1:exon

position:2538128:-1
position: 2538128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2538373:-1
position: 2538373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2536183-2536299:-1:exon

position:2536183:-1
position: 2536183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2536299:-1
position: 2536299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2534085-2534252:-1:exon

position:2534085:-1
position: 2534085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2534252:-1
position: 2534252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2533215-2533888:-1:exon

position:2533888:-1
position: 2533888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111055861
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111055861
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomere zinc finger-associated protein
translation: MAAMLAENYQLKWHSHGVNLHSSIATLHRSESFSDVTLATADGRYVSAHRFVLSACSAYLHQLFQATRNAYPGLASGVGGGAPLVVVLPADIGYRTLSVLLQYMYSGEATVSQQQLDAVLRAGEILRIKGLCRTGAGGSGSGRHGSGTHKERDRDRASRPTGVLTRQDPNIRSSRPLESPATDTEGSHQPHLKVGASKRPASASQGTHTPPNPPPPPAKKSHSLPPPENQKENVEELVGGGSDKQREERERESDEGVLGIEQSMQIELLVKEEPIEWDNMDAPPPHPDSDKAVLHSDINIKSELYSGDEGEEGGDEEDEEVEFEEDEEEGEGGEEDEDEEDMSAFYAPLTCDMCGQTFTTPALWVRHTETHPPTELPRRKAKRNTSGGDSLATNGSAVGEKGDDEGTASEAEYPPLRCELCQEVYSNPGDWVRHIQSAHTEEQLAMSNQSSVGAARPPRASTSTSGSSRSSRLARSAAQFLLKQAALNGRKHCPLCEKTFPSHASMMVHSRTHTGERPYECQVCAKEFNVKSNLLRHMRTLHDEIINPGNVRSAD
SIO_010081: LOC111055861
subclass of: SO_0000673
so part of: LOC111055861
location: complement(join(2533658..2533888,2534085..2534252,2536183..2536299,2538128..2538373,2539281..2539468,2540299..2540437,2541493..2541595,2542690..2542848,2543787..2543900,2546376..2546578))
location: region:2533658-2546578:-1
so has part: feature:2546376-2546578:-1:exon
so has part: feature:2543787-2543900:-1:exon
so has part: feature:2542690-2542848:-1:exon
so has part: feature:2541493-2541595:-1:exon
so has part: feature:2540299-2540437:-1:exon
so has part: feature:2539281-2539468:-1:exon
so has part: feature:2538128-2538373:-1:exon
so has part: feature:2536183-2536299:-1:exon
so has part: feature:2534085-2534252:-1:exon
so has part: feature:2533658-2533888:-1:exon

XP_039293339.1
type: Protein
SIO_000068: ncbiprotein

position:2533658:-1
position: 2533658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2546578:-1
position: 2546578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2546376-2546578:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2543787-2543900:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2542690-2542848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2541493-2541595:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2540299-2540437:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2539281-2539468:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2538128-2538373:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2536183-2536299:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2534085-2534252:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2533658-2533888:-1:exon

LOC111055864
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111055864
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2550039..2576839
location: region:2550039-2576839:1
so has part: feature:2550039-2576839:1:exon
subclass of: SO_0000010

111055864
type: Gene
SIO_000068: ncbigene

position:2550039:1
position: 2550039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2576839:1
position: 2576839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2550039-2576839:1:exon

LOC111055864
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111055864
product: rap1 GTPase-GDP dissociation stimulator 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_039437406.1
SIO_010081: LOC111055864
subclass of: SO_0000673
so part of: LOC111055864
location: join(2550039..2550171,2550795..2550905,2553018..2553290,2554198..2554364,2557645..2557894,2559639..2559785,2561827..2561958,2568165..2568285,2570182..2570324,2572245..2572377,2573839..2574098,2576168..2576839)
location: region:2550039-2576839:1
so has part: feature:2550039-2550171:1:exon
so has part: feature:2550795-2550905:1:exon
so has part: feature:2553018-2553290:1:exon
so has part: feature:2554198-2554364:1:exon
so has part: feature:2557645-2557894:1:exon
so has part: feature:2559639-2559785:1:exon
so has part: feature:2561827-2561958:1:exon
so has part: feature:2568165-2568285:1:exon
so has part: feature:2570182-2570324:1:exon
so has part: feature:2572245-2572377:1:exon
so has part: feature:2573839-2574098:1:exon
so has part: feature:2576168-2576839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2550039-2550171:1:exon

position:2550171:1
position: 2550171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2550795-2550905:1:exon

position:2550795:1
position: 2550795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2550905:1
position: 2550905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2553018-2553290:1:exon

position:2553018:1
position: 2553018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2553290:1
position: 2553290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2554198-2554364:1:exon

position:2554198:1
position: 2554198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2554364:1
position: 2554364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2557645-2557894:1:exon

position:2557645:1
position: 2557645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2557894:1
position: 2557894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2559639-2559785:1:exon

position:2559639:1
position: 2559639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2559785:1
position: 2559785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2561827-2561958:1:exon

position:2561827:1
position: 2561827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2561958:1
position: 2561958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2568165-2568285:1:exon

position:2568165:1
position: 2568165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2568285:1
position: 2568285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2570182-2570324:1:exon

position:2570182:1
position: 2570182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2570324:1
position: 2570324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2572245-2572377:1:exon

position:2572245:1
position: 2572245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2572377:1
position: 2572377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2573839-2574098:1:exon

position:2573839:1
position: 2573839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2574098:1
position: 2574098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2576168-2576839:1:exon

position:2576168:1
position: 2576168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111055864
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111055864
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rap1 GTPase-GDP dissociation stimulator 1
translation: MADLDNLTQQLDQLKIAVEKSEGVLDLLSSIHDHIEPDKDIGSSASDLVAQLVPLISQPDDVTVAARAANLISTLAKSDGGRAACNAESRLIAVLMERLAAVGSNGGDIQVLGQTCRALGNIIFEALYNTSETKKAIVDGDGLVLAMKAIKYSIAQGNGEHARQLRTYAVGFLHNLIIAEEELYQKALDMDIMEVLGSVLEQGVLTREGEEAAIHAAILLNVLTESADPPGSLQISERISASVVKTLEASNCRELSELWLQLLHSQAENETVRMYLAKAGLCELLIQLLEKHHALVKDDETRNLMKMACDLIIIIMNGDESMNLLYGEGKGKVFVGMLSWLTSTDVYMQITGALAMGNFARTDRHCIQMVDCGVSKKLIALLSNNNTSAADIRLQHALLSALRNLVIPSQNKSKVLADGLLDAIFPVLTVPTFPVVFKLLGTLRMVIDGQESAARQLGCNRELLSRLVEWCTTDDHPGVQGEASRLLAWLVKNSRDRDVMGCMVATGAVQQLVAMITAEHWVMQGEALLALSLLAAMRLADAEPHLLEAKVGDRLVAIINPSLERHVFTNLLSLVSQLATSSDMKQHLRERGVPKALSMIVSLKDNMADMRDQVSRLTSMLEMS
SIO_010081: LOC111055864
subclass of: SO_0000673
so part of: LOC111055864
location: join(2550165..2550171,2550795..2550905,2553018..2553290,2554198..2554364,2557645..2557894,2559639..2559785,2561827..2561958,2568165..2568285,2570182..2570324,2572245..2572377,2573839..2574098,2576168..2576298)
location: region:2550165-2576298:1
so has part: feature:2550165-2550171:1:exon
so has part: feature:2550795-2550905:1:exon
so has part: feature:2553018-2553290:1:exon
so has part: feature:2554198-2554364:1:exon
so has part: feature:2557645-2557894:1:exon
so has part: feature:2559639-2559785:1:exon
so has part: feature:2561827-2561958:1:exon
so has part: feature:2568165-2568285:1:exon
so has part: feature:2570182-2570324:1:exon
so has part: feature:2572245-2572377:1:exon
so has part: feature:2573839-2574098:1:exon
so has part: feature:2576168-2576298:1:exon

XP_039293340.1
type: Protein
SIO_000068: ncbiprotein

position:2550165:1
position: 2550165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2576298:1
position: 2576298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2550165-2550171:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2550795-2550905:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2553018-2553290:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2554198-2554364:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2557645-2557894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2559639-2559785:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2561827-2561958:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2568165-2568285:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2570182-2570324:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2572245-2572377:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2573839-2574098:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2576168-2576298:1:exon

LOC111055857
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111055857
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2590805..2602278)
location: region:2590805-2602278:-1
so has part: feature:2590805-2602278:-1:exon
subclass of: SO_0000010

111055857
type: Gene
SIO_000068: ncbigene

position:2590805:-1
position: 2590805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2602278:-1
position: 2602278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2590805-2602278:-1:exon

LOC111055857
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111055857
product: proliferating cell nuclear antigen
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 851 long SRA reads, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_039437409.1
SIO_010081: LOC111055857
subclass of: SO_0000673
so part of: LOC111055857
location: complement(join(2590805..2591906,2593849..2593988,2596208..2596352,2598811..2598976,2601888..2602278))
location: region:2590805-2602278:-1
so has part: feature:2601888-2602278:-1:exon
so has part: feature:2598811-2598976:-1:exon
so has part: feature:2596208-2596352:-1:exon
so has part: feature:2593849-2593988:-1:exon
so has part: feature:2590805-2591906:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2601888-2602278:-1:exon

position:2601888:-1
position: 2601888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2598811-2598976:-1:exon

position:2598811:-1
position: 2598811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2598976:-1
position: 2598976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2596208-2596352:-1:exon

position:2596208:-1
position: 2596208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2596352:-1
position: 2596352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2593849-2593988:-1:exon

position:2593849:-1
position: 2593849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2593988:-1
position: 2593988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2590805-2591906:-1:exon

position:2591906:-1
position: 2591906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111055857
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111055857
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proliferating cell nuclear antigen
translation: MFEARLVQSSILKKVLEAIKELLNEATFDCSDSGIQLQAMDNSHVSLVSLNLRSDGFDKFRCDRNLSMGINLASMSKIMKCAGNEDVLTMKAQDNADLVTFMFESQNQEKVMDYEMKLMNLDQEHLGIPETDYSCVIKLPSGEFARIVRDLSQFGESVVISCTKEGIKFSAGGDIGNANIKLAHTTNVDKDEDAVSIEMQEPVSLTFACRYLNSFAKATPLSPQVQLSMSADVPLVVEYKIGDIGHIRYYLAPKIEDEDN
SIO_010081: LOC111055857
subclass of: SO_0000673
so part of: LOC111055857
location: complement(join(2591796..2591906,2593849..2593988,2596208..2596352,2598811..2598976,2601888..2602108))
location: region:2591796-2602108:-1
so has part: feature:2601888-2602108:-1:exon
so has part: feature:2598811-2598976:-1:exon
so has part: feature:2596208-2596352:-1:exon
so has part: feature:2593849-2593988:-1:exon
so has part: feature:2591796-2591906:-1:exon

XP_039293343.1
type: Protein
SIO_000068: ncbiprotein

position:2591796:-1
position: 2591796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2602108:-1
position: 2602108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2601888-2602108:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2598811-2598976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2596208-2596352:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2593849-2593988:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2591796-2591906:-1:exon

LOC120353519
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353519
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2604644..2615990
location: region:2604644-2615990:1
so has part: feature:2604644-2615990:1:exon
subclass of: SO_0000010

120353519
type: Gene
SIO_000068: ncbigene

position:2604644:1
position: 2604644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2615990:1
position: 2615990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2604644-2615990:1:exon

LOC120353519
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353519
product: uncharacterized LOC120353519, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_039437408.1
SIO_010081: LOC120353519
subclass of: SO_0000673
so part of: LOC120353519
location: join(2604644..2604795,2606310..2606403,2609774..2609887,2610853..2611216,2613385..2613470,2614744..2614876,2615384..2615990)
location: region:2604644-2615990:1
so has part: feature:2604644-2604795:1:exon
so has part: feature:2606310-2606403:1:exon
so has part: feature:2609774-2609887:1:exon
so has part: feature:2610853-2611216:1:exon
so has part: feature:2613385-2613470:1:exon
so has part: feature:2614744-2614876:1:exon
so has part: feature:2615384-2615990:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2604644-2604795:1:exon

position:2604795:1
position: 2604795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2606310-2606403:1:exon

position:2606310:1
position: 2606310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2606403:1
position: 2606403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2609774-2609887:1:exon

position:2609774:1
position: 2609774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2609887:1
position: 2609887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2610853-2611216:1:exon

position:2610853:1
position: 2610853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2611216:1
position: 2611216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2613385-2613470:1:exon

position:2613385:1
position: 2613385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2613470:1
position: 2613470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2614744-2614876:1:exon

position:2614744:1
position: 2614744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2614876:1
position: 2614876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2615384-2615990:1:exon

position:2615384:1
position: 2615384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120353519
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353519
product: uncharacterized LOC120353519, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_039437407.1
SIO_010081: LOC120353519
subclass of: SO_0000673
so part of: LOC120353519
location: join(2604644..2604795,2606310..2606403,2610853..2611216,2613385..2613470,2614744..2614876,2615384..2615802)
location: region:2604644-2615802:1
so has part: feature:2604644-2604795:1:exon
so has part: feature:2606310-2606403:1:exon
so has part: feature:2610853-2611216:1:exon
so has part: feature:2613385-2613470:1:exon
so has part: feature:2614744-2614876:1:exon
so has part: feature:2615384-2615802:1:exon

position:2615802:1
position: 2615802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2604644-2604795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2606310-2606403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2610853-2611216:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2613385-2613470:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2614744-2614876:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2615384-2615802:1:exon

LOC120353519
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353519
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120353519 isoform X1
translation: MFAFQLRKFSCGSCKFSPRARSLAIGWFNFLICFIPLVAIVWYAMTGAEGLDRFLYNTADLSSTKVEYVKAVAGFENARSLVSDIKYNEVKYKQARDKATWNSQEDDIFKNFDDPLWDHWRELRPKTILSDIICDGGLLKFVYRVLFVAGGDSIFFLVFIGTILGIGVVFNGLLLIGAHINNVTHMAAWVAYQRFIFILDLILLLITVYYSQSPLLTFIQTLRMIFGLWCIGTVNRNIRSFTSEPKIMEAPVFSINTNPLKIDTVHENVYGIKKNFYISCRKRIHIVSNIRFTLNYLH
SIO_010081: LOC120353519
subclass of: SO_0000673
so part of: LOC120353519
location: join(2606314..2606403,2610853..2611216,2613385..2613470,2614744..2614876,2615384..2615607)
location: region:2606314-2615607:1
so has part: feature:2606314-2606403:1:exon
so has part: feature:2610853-2611216:1:exon
so has part: feature:2613385-2613470:1:exon
so has part: feature:2614744-2614876:1:exon
so has part: feature:2615384-2615607:1:exon

XP_039293341.1
type: Protein
SIO_000068: ncbiprotein

position:2606314:1
position: 2606314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2615607:1
position: 2615607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2606314-2606403:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2610853-2611216:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2613385-2613470:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2614744-2614876:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2615384-2615607:1:exon

LOC120353519
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353519
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120353519 isoform X2
translation: MTGAEGLDRFLYNTADLSSTKVEYVKAVAGFENARSLVSDIKYNEVKYKQARDKATWNSQEDDIFKNFDDPLWDHWRELRPKTILSDIICDGGLLKFVYRVLFVAGGDSIFFLVFIGTILGIGVVFNGLLLIGAHINNVTHMAAWVAYQRFIFILDLILLLITVYYSQSPLLTFIQTLRMIFGLWCIGTVNRNIRSFTSEPKIMEAPVFSINTNPLKIDTVHENVYGIKKNFYISCRKRIHIVSNIRFTLNYLH
SIO_010081: LOC120353519
subclass of: SO_0000673
so part of: LOC120353519
location: join(2610895..2611216,2613385..2613470,2614744..2614876,2615384..2615607)
location: region:2610895-2615607:1
so has part: feature:2610895-2611216:1:exon
so has part: feature:2613385-2613470:1:exon
so has part: feature:2614744-2614876:1:exon
so has part: feature:2615384-2615607:1:exon

XP_039293342.1
type: Protein
SIO_000068: ncbiprotein

position:2610895:1
position: 2610895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2610895-2611216:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2613385-2613470:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2614744-2614876:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2615384-2615607:1:exon

LOC120353520
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353520
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2622410..2641691)
location: region:2622410-2641691:-1
so has part: feature:2622410-2641691:-1:exon
subclass of: SO_0000010

120353520
type: Gene
SIO_000068: ncbigene

position:2622410:-1
position: 2622410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2641691:-1
position: 2641691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2622410-2641691:-1:exon

LOC120353520
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353520
product: uncharacterized LOC120353520
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 75 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_039437410.1
SIO_010081: LOC120353520
subclass of: SO_0000673
so part of: LOC120353520
location: complement(join(2622410..2622601,2623739..2623868,2625192..2625277,2637886..2638240,2639622..2639739,2641345..2641691))
location: region:2622410-2641691:-1
so has part: feature:2641345-2641691:-1:exon
so has part: feature:2639622-2639739:-1:exon
so has part: feature:2637886-2638240:-1:exon
so has part: feature:2625192-2625277:-1:exon
so has part: feature:2623739-2623868:-1:exon
so has part: feature:2622410-2622601:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2641345-2641691:-1:exon

position:2641345:-1
position: 2641345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2639622-2639739:-1:exon

position:2639622:-1
position: 2639622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2639739:-1
position: 2639739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2637886-2638240:-1:exon

position:2637886:-1
position: 2637886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2638240:-1
position: 2638240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2625192-2625277:-1:exon

position:2625192:-1
position: 2625192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2625277:-1
position: 2625277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2623739-2623868:-1:exon

position:2623739:-1
position: 2623739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2623868:-1
position: 2623868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2622410-2622601:-1:exon

position:2622601:-1
position: 2622601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120353520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353520
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120353520
translation: MISVAFSSLFYYVPSLVCISDWFKALQKTYHKFVNFENLNDSYKFVKKSLRVLSCFASLEKDFRKMTKQKSQDTTEENLRKLPSRGYKCSPRTRTLAIGWFNFIICLISFECILWYGVNSTDEHLDRFLYNTADLSPTKVEYIKSVAGFAREEAILRNLEYNQIKNKLAKDGNDRVYDSDILQDPLYDHWNALRPAVILSDIIFNENLLRLVHRVLFVAGGGSIFFLIIIGSIVGIGVIFNGLLLYGAHVDNVTQIAVWIAYQRFIFIFDVGLLILTIGSRTPLLTLLQMLRIIFGLWCTRNVNRHLRSFSWPEKTQLYKTQVKLLQPSSNHSSEPISIDVSNLSKLIEA
SIO_010081: LOC120353520
subclass of: SO_0000673
so part of: LOC120353520
location: complement(join(2622429..2622601,2623739..2623868,2625192..2625277,2637886..2638240,2639622..2639739,2641345..2641535))
location: region:2622429-2641535:-1
so has part: feature:2641345-2641535:-1:exon
so has part: feature:2639622-2639739:-1:exon
so has part: feature:2637886-2638240:-1:exon
so has part: feature:2625192-2625277:-1:exon
so has part: feature:2623739-2623868:-1:exon
so has part: feature:2622429-2622601:-1:exon

XP_039293344.1
type: Protein
SIO_000068: ncbiprotein

position:2622429:-1
position: 2622429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2641535:-1
position: 2641535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2641345-2641535:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2639622-2639739:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2637886-2638240:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2625192-2625277:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2623739-2623868:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2622429-2622601:-1:exon

LOC111061745
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111061745
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2631556..2635480
location: region:2631556-2635480:1
so has part: feature:2631556-2635480:1:exon
subclass of: SO_0000011

111061745
type: Gene
SIO_000068: ncbigene

position:2631556:1
position: 2631556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2635480:1
position: 2635480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2631556-2635480:1:exon

LOC111061745
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC111061745
product: uncharacterized LOC111061745
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XR_005572431.1
SIO_010081: LOC111061745
subclass of: SO_0000673
so part of: LOC111061745
location: join(2631556..2631790,2632599..2632758,2633838..2633937,2635315..2635480)
location: region:2631556-2635480:1
so has part: feature:2631556-2631790:1:exon
so has part: feature:2632599-2632758:1:exon
so has part: feature:2633838-2633937:1:exon
so has part: feature:2635315-2635480:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2631556-2631790:1:exon

position:2631790:1
position: 2631790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2632599-2632758:1:exon

position:2632599:1
position: 2632599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2632758:1
position: 2632758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2633838-2633937:1:exon

position:2633838:1
position: 2633838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2633937:1
position: 2633937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2635315-2635480:1:exon

position:2635315:1
position: 2635315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111049483
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111049483
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2644592..2657498)
location: region:2644592-2657498:-1
so has part: feature:2644592-2657498:-1:exon
subclass of: SO_0000010

111049483
type: Gene
SIO_000068: ncbigene

position:2644592:-1
position: 2644592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2657498:-1
position: 2657498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2644592-2657498:-1:exon

LOC111049483
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111049483
product: uncharacterized LOC111049483, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 126 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_039437413.1
SIO_010081: LOC111049483
subclass of: SO_0000673
so part of: LOC111049483
location: complement(join(2644592..2646627,2652271..2652403,2654435..2654520,2657090..2657498))
location: region:2644592-2657498:-1
so has part: feature:2657090-2657498:-1:exon
so has part: feature:2654435-2654520:-1:exon
so has part: feature:2652271-2652403:-1:exon
so has part: feature:2644592-2646627:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2657090-2657498:-1:exon

position:2657090:-1
position: 2657090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2654435-2654520:-1:exon

position:2654435:-1
position: 2654435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2654520:-1
position: 2654520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2652271-2652403:-1:exon

position:2652271:-1
position: 2652271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2652403:-1
position: 2652403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2644592-2646627:-1:exon

position:2646627:-1
position: 2646627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111049483
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111049483
product: uncharacterized LOC111049483, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 66 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_039437411.1
SIO_010081: LOC111049483
subclass of: SO_0000673
so part of: LOC111049483
location: complement(join(2644592..2646627,2649304..2650309))
location: region:2644592-2650309:-1
so has part: feature:2649304-2650309:-1:exon
so has part: feature:2644592-2646627:-1:exon

position:2650309:-1
position: 2650309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2649304-2650309:-1:exon

position:2649304:-1
position: 2649304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2644592-2646627:-1:exon

LOC111049483
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111049483
product: uncharacterized LOC111049483, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 143 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_039437412.1
SIO_010081: LOC111049483
subclass of: SO_0000673
so part of: LOC111049483
location: complement(join(2644597..2645729,2650481..2650637,2652271..2652403,2654435..2654520,2657090..2657497))
location: region:2644597-2657497:-1
so has part: feature:2657090-2657497:-1:exon
so has part: feature:2654435-2654520:-1:exon
so has part: feature:2652271-2652403:-1:exon
so has part: feature:2650481-2650637:-1:exon
so has part: feature:2644597-2645729:-1:exon

position:2644597:-1
position: 2644597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2657497:-1
position: 2657497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2657090-2657497:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2654435-2654520:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2652271-2652403:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2650481-2650637:-1:exon

position:2650481:-1
position: 2650481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2650637:-1
position: 2650637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2644597-2645729:-1:exon

position:2645729:-1
position: 2645729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111049483
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111049483
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111049483 isoform X2
translation: MTGAVDLDVFLYNTPGQNPTQIKYLKSISPFAREERVLTLLKHQELKHELAEIHAKYGGPPIEEWRNYELSPSEIQNQDDNYYWTSRALVKLSDVITDEDLLRFVHRILFVSGGDSFFFLIIGGTIFGIGVVFNGLLLVGAHTNNVTAMSAWVPYQRLLFAFDLYCLLVITVVSSTPALALFQTARIFLRWWCIRNVNRHLKNFSPPESHKPLFNKTQFDKTQINLLPNNRTEAKPVVCRLAIVNHLF
SIO_010081: LOC111049483
subclass of: SO_0000673
so part of: LOC111049483
location: complement(join(2645702..2645729,2650481..2650637,2652271..2652403,2654435..2654520,2657090..2657432))
location: region:2645702-2657432:-1
so has part: feature:2657090-2657432:-1:exon
so has part: feature:2654435-2654520:-1:exon
so has part: feature:2652271-2652403:-1:exon
so has part: feature:2650481-2650637:-1:exon
so has part: feature:2645702-2645729:-1:exon

XP_039293346.1
type: Protein
SIO_000068: ncbiprotein

position:2645702:-1
position: 2645702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2657432:-1
position: 2657432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2657090-2657432:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2654435-2654520:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2652271-2652403:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2650481-2650637:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2645702-2645729:-1:exon

LOC111049483
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111049483
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111049483 isoform X3
translation: MTGAVDLDVFLYNTPGQNPTQIKYLKSISPFAREERVLTLLKHQELKHELAEIHAKYGGPPIEEWRNYELSPSEIQNQDDNYYWTSRALVKLSDVITDEDLLRFVHRILFVSGGDSFFFLIIGGTIFGIGVVFNGLLLVGAHTNNVTAMSAWVPYQRLLFAFDLYCLLVITVVSSTPALALFQTARIYGSGQLSQSQMHF
SIO_010081: LOC111049483
subclass of: SO_0000673
so part of: LOC111049483
location: complement(join(2646587..2646627,2652271..2652403,2654435..2654520,2657090..2657432))
location: region:2646587-2657432:-1
so has part: feature:2657090-2657432:-1:exon
so has part: feature:2654435-2654520:-1:exon
so has part: feature:2652271-2652403:-1:exon
so has part: feature:2646587-2646627:-1:exon

XP_039293347.1
type: Protein
SIO_000068: ncbiprotein

position:2646587:-1
position: 2646587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2657090-2657432:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2654435-2654520:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2652271-2652403:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2646587-2646627:-1:exon

LOC111049483
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111049483
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111049483 isoform X1
translation: MSISTQNIHPLSLSGDVANNFSTWLQQFKIFLIAANLDEAPSKQKVALFLALIGPQGLAVFNSFNKDSDAIKFEELVQLFKEHFLPTKNLTVERHKFFTRVQQPGESIDDFVTALKTLSNSCEFGSLTDSLVKDILICGLNDSHTNIKERLLQDPDLNLEKALQVCRSVVMSQQHVKALLCPTSDLTIGAVNRRFLWDGSNQFHQPANNSGYVHTPSNSGDVIQQDHSSTQPFRSGQVNQRPNMPPICDKCGQVHRFKCPALNKTCSRCGRLNPFAKMCRSKTVMSIEYHQSQPQENQANTSDTSCSDGSGQLSQSQMHF
SIO_010081: LOC111049483
subclass of: SO_0000673
so part of: LOC111049483
location: complement(join(2646587..2646627,2649304..2650225))
location: region:2646587-2650225:-1
so has part: feature:2649304-2650225:-1:exon
so has part: feature:2646587-2646627:-1:exon

XP_039293345.1
type: Protein
SIO_000068: ncbiprotein

position:2650225:-1
position: 2650225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2649304-2650225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2646587-2646627:-1:exon

LOC120353521
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353521
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2670358..2693780
location: region:2670358-2693780:1
so has part: feature:2670358-2693780:1:exon
subclass of: SO_0000010

120353521
type: Gene
SIO_000068: ncbigene

position:2670358:1
position: 2670358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2693780:1
position: 2693780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2670358-2693780:1:exon

LOC120353521
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353521
product: tyrosine--tRNA ligase, cytoplasmic-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 27 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_039437414.1
SIO_010081: LOC120353521
subclass of: SO_0000673
so part of: LOC120353521
location: join(2670358..2670481,2672625..2672765,2674786..2674971,2679562..2679810,2682555..2682683,2684884..2685034,2690253..2690400,2693134..2693780)
location: region:2670358-2693780:1
so has part: feature:2670358-2670481:1:exon
so has part: feature:2672625-2672765:1:exon
so has part: feature:2674786-2674971:1:exon
so has part: feature:2679562-2679810:1:exon
so has part: feature:2682555-2682683:1:exon
so has part: feature:2684884-2685034:1:exon
so has part: feature:2690253-2690400:1:exon
so has part: feature:2693134-2693780:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2670358-2670481:1:exon

position:2670481:1
position: 2670481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2672625-2672765:1:exon

position:2672625:1
position: 2672625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2672765:1
position: 2672765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2674786-2674971:1:exon

position:2674786:1
position: 2674786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2674971:1
position: 2674971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2679562-2679810:1:exon

position:2679562:1
position: 2679562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2679810:1
position: 2679810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2682555-2682683:1:exon

position:2682555:1
position: 2682555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2682683:1
position: 2682683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2684884-2685034:1:exon

position:2684884:1
position: 2684884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2685034:1
position: 2685034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2690253-2690400:1:exon

position:2690253:1
position: 2690253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2690400:1
position: 2690400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2693134-2693780:1:exon

position:2693134:1
position: 2693134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120353521
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353521
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine--tRNA ligase, cytoplasmic-like
translation: MSEKYLPQLGYAKRIHLMNPMVAGLAGGKMSSSEEDSKIDLLDSPAAVKKKLKKAFCEPGNVDDNGVLAFAKHVVFSLFKSGQKFEIHRDDKNGGNLSFATYDELAACFATSQLHPADLKAATERYINDLLEPIRRTFEAPELKALAASAYPPPAGKKQQPAQAKQGGGGGTATNDAIDPSRLDVRVGKIVKVDKHPDADALYVEHIDLGEEEPRTIVSGLVKYVPIEEMQDRMVVVLCNLKPAKMRGVESQGMVLCASVEEGDTKCVEPLLPPAGSAAGDRVHVDGYESSRQPDAVLNPKKKIWEQLQVDLKTSSSCEAQWKGSSLQTKLGKVTCKSMKNAPIK
SIO_010081: LOC120353521
subclass of: SO_0000673
so part of: LOC120353521
location: join(2672702..2672765,2674786..2674971,2679562..2679810,2682555..2682683,2684884..2685034,2690253..2690400,2693134..2693244)
location: region:2672702-2693244:1
so has part: feature:2672702-2672765:1:exon
so has part: feature:2674786-2674971:1:exon
so has part: feature:2679562-2679810:1:exon
so has part: feature:2682555-2682683:1:exon
so has part: feature:2684884-2685034:1:exon
so has part: feature:2690253-2690400:1:exon
so has part: feature:2693134-2693244:1:exon

XP_039293348.1
type: Protein
SIO_000068: ncbiprotein

position:2672702:1
position: 2672702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2693244:1
position: 2693244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2672702-2672765:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2674786-2674971:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2679562-2679810:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2682555-2682683:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2684884-2685034:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2690253-2690400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2693134-2693244:1:exon

LOC111054573
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111054573
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2713724..2748610)
location: region:2713724-2748610:-1
so has part: feature:2713724-2748610:-1:exon
subclass of: SO_0000010

111054573
type: Gene
SIO_000068: ncbigene

position:2713724:-1
position: 2713724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2748610:-1
position: 2748610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2713724-2748610:-1:exon

LOC111054573
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111054573
product: tyrosine--tRNA ligase, cytoplasmic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 80 long SRA reads, 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_022341623.2
SIO_010081: LOC111054573
subclass of: SO_0000673
so part of: LOC111054573
location: complement(join(2713724..2715552,2718285..2718432,2723377..2723527,2725727..2725855,2728624..2728872,2732980..2733165,2735905..2736045,2738872..2738993,2743605..2743780,2745999..2746223,2748476..2748610))
location: region:2713724-2748610:-1
so has part: feature:2748476-2748610:-1:exon
so has part: feature:2745999-2746223:-1:exon
so has part: feature:2743605-2743780:-1:exon
so has part: feature:2738872-2738993:-1:exon
so has part: feature:2735905-2736045:-1:exon
so has part: feature:2732980-2733165:-1:exon
so has part: feature:2728624-2728872:-1:exon
so has part: feature:2725727-2725855:-1:exon
so has part: feature:2723377-2723527:-1:exon
so has part: feature:2718285-2718432:-1:exon
so has part: feature:2713724-2715552:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2748476-2748610:-1:exon

position:2748476:-1
position: 2748476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2745999-2746223:-1:exon

position:2745999:-1
position: 2745999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2746223:-1
position: 2746223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2743605-2743780:-1:exon

position:2743605:-1
position: 2743605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2743780:-1
position: 2743780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2738872-2738993:-1:exon

position:2738872:-1
position: 2738872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2738993:-1
position: 2738993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2735905-2736045:-1:exon

position:2735905:-1
position: 2735905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2736045:-1
position: 2736045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2732980-2733165:-1:exon

position:2732980:-1
position: 2732980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2733165:-1
position: 2733165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2728624-2728872:-1:exon

position:2728624:-1
position: 2728624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2728872:-1
position: 2728872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2725727-2725855:-1:exon

position:2725727:-1
position: 2725727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2725855:-1
position: 2725855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2723377-2723527:-1:exon

position:2723377:-1
position: 2723377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2723527:-1
position: 2723527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2718285-2718432:-1:exon

position:2718285:-1
position: 2718285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2718432:-1
position: 2718432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2713724-2715552:-1:exon

position:2715552:-1
position: 2715552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111054573
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111054573
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine--tRNA ligase, cytoplasmic
translation: MIMGVSSQDSTGTWQTKLELISRNLQEVLGEDRMTAILKERDLKIYWGTATTGRPHIAYFVPMSKIGDFLRAGCEVTILFADLHAYLDNMKAPWELLALRTQYYEHVIKAMLRSIGVPLDKLKFVRGTDYQLSKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGVDQRKIFTMSEKYLPQLGYAKRIHLMNPMVAGLAGGKMSSSEEDSKIDLLDSPAAVKKKLKKAFCEPGNVDDNGVLAFAKHVVFSLFKSGQKFEIHRDDKNGGNLSFATYDELAACFATSQLHPADLKAATERYINDLLEPIRRTFEAPELKALAASAYPPPAGKKQQPAQAKQGGGGGTATNDAIDPSRLDVRVGKIVKVDKHPDADALYVEHIDLGEEEPRTIVSGLVKYVPIEEMQDRMVVVLCNLKPAKMRGVESQGMVLCASVEEGDTKCVEPLLPPAGSAAGDRVHVDGYESSRQPDAVLNPKKKIWEQLQVDLKTSSSCEAQWKGSSLQTKLGKVTCKSMKNAPIK
SIO_010081: LOC111054573
subclass of: SO_0000673
so part of: LOC111054573
location: complement(join(2715442..2715552,2718285..2718432,2723377..2723527,2725727..2725855,2728624..2728872,2732980..2733165,2735905..2736045,2738872..2738993,2743605..2743780,2745999..2746223))
location: region:2715442-2746223:-1
so has part: feature:2745999-2746223:-1:exon
so has part: feature:2743605-2743780:-1:exon
so has part: feature:2738872-2738993:-1:exon
so has part: feature:2735905-2736045:-1:exon
so has part: feature:2732980-2733165:-1:exon
so has part: feature:2728624-2728872:-1:exon
so has part: feature:2725727-2725855:-1:exon
so has part: feature:2723377-2723527:-1:exon
so has part: feature:2718285-2718432:-1:exon
so has part: feature:2715442-2715552:-1:exon

XP_022197315.1
type: Protein
SIO_000068: ncbiprotein

position:2715442:-1
position: 2715442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2745999-2746223:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2743605-2743780:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2738872-2738993:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2735905-2736045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2732980-2733165:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2728624-2728872:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2725727-2725855:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2723377-2723527:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2718285-2718432:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2715442-2715552:-1:exon

LOC111054574
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111054574
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2750605..2758996
location: region:2750605-2758996:1
so has part: feature:2750605-2758996:1:exon
subclass of: SO_0000010

111054574
type: Gene
SIO_000068: ncbigene

position:2750605:1
position: 2750605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2758996:1
position: 2758996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2750605-2758996:1:exon

LOC111054574
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111054574
product: putative phospholipase B-like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_022341624.2
SIO_010081: LOC111054574
subclass of: SO_0000673
so part of: LOC111054574
location: join(2750605..2751411,2752613..2752733,2755574..2755804,2757338..2758996)
location: region:2750605-2758996:1
so has part: feature:2750605-2751411:1:exon
so has part: feature:2752613-2752733:1:exon
so has part: feature:2755574-2755804:1:exon
so has part: feature:2757338-2758996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2750605-2751411:1:exon

position:2751411:1
position: 2751411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2752613-2752733:1:exon

position:2752613:1
position: 2752613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2752733:1
position: 2752733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2755574-2755804:1:exon

position:2755574:1
position: 2755574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2755804:1
position: 2755804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2757338-2758996:1:exon

position:2757338:1
position: 2757338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111054574
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111054574
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative phospholipase B-like 2
translation: MLLKFISLTFCMVQASAHRPNTFYFTQKSAQKTVSVIEGVAKSTDSWTARGYFDNKVNRTGFGYLEIETNIKFDSVSQAYHAGYLEGFLTADLIYSRWYNMVRDWCKDDRQNCDKINKFIEKNSIWITEKFEKNGNETYWYQLKLFYVQLYGMVEGYNSNTKHDKLGLADIMWLNLLTEVGDIQIINNLNSTIPDSDHCSALIKIMPDWSDIYFGHVTWGEYAEMLRILKKYVFRYRTSPQDSTLMPGYEMSMSSYPGAIISIDDFYLISSGLAVMETTNHVYNHSIYAGIKPENIVWEEFRGMIANRLAKDGKTWHGIFARYNSGTYNNQWMVFDYNKFKKGKPLESGALWVSEQMPLFFKNQDVTNVLVEKGYWGSFNIPYFPEVYEMSGYKTMYETQGTWYSHSDAPRAKIFARDQGNVHDMDTFMELMRSNDFTKDPFAVCNCTPPYSAAGAISSRKDLNPATGSGVQERKSSGATDAKLTNSQLFKDLKFVAVSGPSTGTDAMLPVFKWSESPFLNRTHMSLPDEFNFHPVTYKWLYEQGNAIA
SIO_010081: LOC111054574
subclass of: SO_0000673
so part of: LOC111054574
location: join(2750950..2751411,2752613..2752733,2755574..2755804,2757338..2758173)
location: region:2750950-2758173:1
so has part: feature:2750950-2751411:1:exon
so has part: feature:2752613-2752733:1:exon
so has part: feature:2755574-2755804:1:exon
so has part: feature:2757338-2758173:1:exon

XP_022197316.1
type: Protein
SIO_000068: ncbiprotein

position:2750950:1
position: 2750950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2758173:1
position: 2758173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2750950-2751411:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2752613-2752733:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2755574-2755804:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2757338-2758173:1:exon

LOC111054576
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111054576
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2842337..2846483
location: region:2842337-2846483:1
so has part: feature:2842337-2846483:1:exon
subclass of: SO_0000010

111054576
type: Gene
SIO_000068: ncbigene

position:2842337:1
position: 2842337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2846483:1
position: 2846483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2842337-2846483:1:exon

LOC111054576
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111054576
product: neurogenic differentiation factor 4-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039437415.1
SIO_010081: LOC111054576
subclass of: SO_0000673
so part of: LOC111054576
location: 2842337..2846483
location: region:2842337-2846483:1
so has part: feature:2842337-2846483:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2842337-2846483:1:exon

LOC111054576
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111054576
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: neurogenic differentiation factor 4-like
translation: MLATMNPQVLLLQTSDSNNNRSPPLDKCYSLXPRSTLKPHESDLETDLDWRPSRGRTKKRPKQKPPPLSKYRRKTANARERSRMREINEAFEALRRAIPHLSTSSDNPNEKLTKITTLRLAMKYISALNQALQVDALQQPDFESDADSLLSDYTLTPTPAFSEHSSLTSDFSDNILPTVSFADPNTFVSPDDDFFGATGLVVPDLGGGGYVFDDLSFATDFS
SIO_010081: LOC111054576
subclass of: SO_0000673
so part of: LOC111054576
location: 2845569..2846236
location: region:2845569-2846236:1
so has part: feature:2845569-2846236:1:exon

XP_039293349.1
type: Protein
SIO_000068: ncbiprotein

position:2845569:1
position: 2845569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2846236:1
position: 2846236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2845569-2846236:1:exon

LOC111049476
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111049476
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3039663..3053581
location: region:3039663-3053581:1
so has part: feature:3039663-3053581:1:exon
subclass of: SO_0000010

111049476
type: Gene
SIO_000068: ncbigene

position:3039663:1
position: 3039663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3053581:1
position: 3053581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3039663-3053581:1:exon

LOC111049476
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111049476
product: cuticle protein 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 67 long SRA reads, 18 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_039437416.1
SIO_010081: LOC111049476
subclass of: SO_0000673
so part of: LOC111049476
location: join(3039663..3040092,3042121..3042210,3053342..3053581)
location: region:3039663-3053581:1
so has part: feature:3039663-3040092:1:exon
so has part: feature:3042121-3042210:1:exon
so has part: feature:3053342-3053581:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3039663-3040092:1:exon

position:3040092:1
position: 3040092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3042121-3042210:1:exon

position:3042121:1
position: 3042121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3042210:1
position: 3042210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3053342-3053581:1:exon

position:3053342:1
position: 3053342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111049476
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111049476
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cuticle protein 7
translation: MKLVLVSFASACMFLLADAQYGYGDHHDHHEDYPHEPAHYTFEYKVHDPHTHDVKSQHETRSGDDVKGFYSLVEPDGSIREVHYTADKHNGFNAVVHHKKHY
SIO_010081: LOC111049476
subclass of: SO_0000673
so part of: LOC111049476
location: join(3040078..3040092,3042121..3042210,3053342..3053545)
location: region:3040078-3053545:1
so has part: feature:3040078-3040092:1:exon
so has part: feature:3042121-3042210:1:exon
so has part: feature:3053342-3053545:1:exon

XP_039293350.1
type: Protein
SIO_000068: ncbiprotein

position:3040078:1
position: 3040078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3053545:1
position: 3053545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3040078-3040092:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3042121-3042210:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3053342-3053545:1:exon

LOC120353522
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353522
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3065886..3069632
location: region:3065886-3069632:1
so has part: feature:3065886-3069632:1:exon
subclass of: SO_0000011

120353522
type: Gene
SIO_000068: ncbigene

position:3065886:1
position: 3065886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3069632:1
position: 3069632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3065886-3069632:1:exon

LOC120353522
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC120353522
product: uncharacterized LOC120353522
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XR_005572432.1
SIO_010081: LOC120353522
subclass of: SO_0000673
so part of: LOC120353522
location: join(3065886..3066213,3067838..3067955,3069338..3069632)
location: region:3065886-3069632:1
so has part: feature:3065886-3066213:1:exon
so has part: feature:3067838-3067955:1:exon
so has part: feature:3069338-3069632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3065886-3066213:1:exon

position:3066213:1
position: 3066213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3067838-3067955:1:exon

position:3067838:1
position: 3067838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3067955:1
position: 3067955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3069338-3069632:1:exon

position:3069338:1
position: 3069338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120353735
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353735
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3080053..3080171)
location: region:3080053-3080171:-1
so has part: feature:3080053-3080171:-1:exon
subclass of: SO_0000573

120353735
type: Gene
SIO_000068: ncbigene

position:3080053:-1
position: 3080053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3080171:-1
position: 3080171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3080053-3080171:-1:exon

LOC120353735
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 108931
gene: LOC120353735
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005572553.1
SIO_010081: LOC120353735
subclass of: SO_0000673
so part of: LOC120353735
location: complement(3080053..3080171)
location: region:3080053-3080171:-1
so has part: feature:3080053-3080171:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3080053-3080171:-1:exon

LOC120353752
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353752
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3081122..3081314)
location: region:3081122-3081314:-1
so has part: feature:3081122-3081314:-1:exon
subclass of: SO_0000623

120353752
type: Gene
SIO_000068: ncbigene

position:3081122:-1
position: 3081122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3081314:-1
position: 3081314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3081122-3081314:-1:exon

LOC120353752
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: snRNA
gene: LOC120353752
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005572568.1
SIO_010081: LOC120353752
subclass of: SO_0000673
so part of: LOC120353752
location: complement(3081122..3081314)
location: region:3081122-3081314:-1
so has part: feature:3081122-3081314:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3081122-3081314:-1:exon

LOC120353741
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353741
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3082220..3082381)
location: region:3082220-3082381:-1
so has part: feature:3082220-3082381:-1:exon
subclass of: SO_0000623

120353741
type: Gene
SIO_000068: ncbigene

position:3082220:-1
position: 3082220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3082381:-1
position: 3082381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3082220-3082381:-1:exon

LOC120353741
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: snRNA
gene: LOC120353741
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005572558.1
SIO_010081: LOC120353741
subclass of: SO_0000673
so part of: LOC120353741
location: complement(3082220..3082381)
location: region:3082220-3082381:-1
so has part: feature:3082220-3082381:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3082220-3082381:-1:exon

LOC120353725
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353725
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3083487..3083605
location: region:3083487-3083605:1
so has part: feature:3083487-3083605:1:exon
subclass of: SO_0000573

120353725
type: Gene
SIO_000068: ncbigene

position:3083487:1
position: 3083487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3083605:1
position: 3083605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3083487-3083605:1:exon

LOC120353725
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 108931
gene: LOC120353725
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005572543.1
SIO_010081: LOC120353725
subclass of: SO_0000673
so part of: LOC120353725
location: 3083487..3083605
location: region:3083487-3083605:1
so has part: feature:3083487-3083605:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3083487-3083605:1:exon

LOC120353736
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353736
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3083942..3084060)
location: region:3083942-3084060:-1
so has part: feature:3083942-3084060:-1:exon
subclass of: SO_0000573

120353736
type: Gene
SIO_000068: ncbigene

position:3083942:-1
position: 3083942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3084060:-1
position: 3084060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3083942-3084060:-1:exon

LOC120353736
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 108931
gene: LOC120353736
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005572554.1
SIO_010081: LOC120353736
subclass of: SO_0000673
so part of: LOC120353736
location: complement(3083942..3084060)
location: region:3083942-3084060:-1
so has part: feature:3083942-3084060:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3083942-3084060:-1:exon

LOC120353753
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353753
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3085011..3085203)
location: region:3085011-3085203:-1
so has part: feature:3085011-3085203:-1:exon
subclass of: SO_0000623

120353753
type: Gene
SIO_000068: ncbigene

position:3085011:-1
position: 3085011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3085203:-1
position: 3085203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3085011-3085203:-1:exon

LOC120353753
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: snRNA
gene: LOC120353753
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005572569.1
SIO_010081: LOC120353753
subclass of: SO_0000673
so part of: LOC120353753
location: complement(3085011..3085203)
location: region:3085011-3085203:-1
so has part: feature:3085011-3085203:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3085011-3085203:-1:exon

LOC120353742
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353742
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3086106..3086267)
location: region:3086106-3086267:-1
so has part: feature:3086106-3086267:-1:exon
subclass of: SO_0000623

120353742
type: Gene
SIO_000068: ncbigene

position:3086106:-1
position: 3086106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3086267:-1
position: 3086267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3086106-3086267:-1:exon

LOC120353742
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: snRNA
gene: LOC120353742
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005572559.1
SIO_010081: LOC120353742
subclass of: SO_0000673
so part of: LOC120353742
location: complement(3086106..3086267)
location: region:3086106-3086267:-1
so has part: feature:3086106-3086267:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3086106-3086267:-1:exon

LOC120353523
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353523
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3087271..3087678
location: region:3087271-3087678:1
so has part: feature:3087271-3087678:1:exon
subclass of: SO_0000010

120353523
type: Gene
SIO_000068: ncbigene

position:3087271:1
position: 3087271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3087678:1
position: 3087678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3087271-3087678:1:exon

LOC120353523
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353523
product: uncharacterized LOC120353523
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039437417.1
SIO_010081: LOC120353523
subclass of: SO_0000673
so part of: LOC120353523
location: 3087271..3087678
location: region:3087271-3087678:1
so has part: feature:3087271-3087678:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3087271-3087678:1:exon

LOC120353523
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353523
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120353523
translation: MLQVFVNRCLRRIMGIRWPEVISNEALWESTCQDPIQMQIKRRKWRWIGHTLRKEEGAIEKDALDWNPQGHRARGRPKITWKRTIQTEIGRAGKTWLEVKALARDRVGWRTFSEALCSSRSDRN
SIO_010081: LOC120353523
subclass of: SO_0000673
so part of: LOC120353523
location: 3087300..3087674
location: region:3087300-3087674:1
so has part: feature:3087300-3087674:1:exon

XP_039293351.1
type: Protein
SIO_000068: ncbiprotein

position:3087300:1
position: 3087300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3087674:1
position: 3087674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3087300-3087674:1:exon

LOC120353738
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353738
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3089383..3089501
location: region:3089383-3089501:1
so has part: feature:3089383-3089501:1:exon
subclass of: SO_0000573

120353738
type: Gene
SIO_000068: ncbigene

position:3089383:1
position: 3089383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3089501:1
position: 3089501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3089383-3089501:1:exon

LOC120353738
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 108931
gene: LOC120353738
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005572556.1
SIO_010081: LOC120353738
subclass of: SO_0000673
so part of: LOC120353738
location: 3089383..3089501
location: region:3089383-3089501:1
so has part: feature:3089383-3089501:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3089383-3089501:1:exon

LOC120353746
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353746
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3089836..3089954)
location: region:3089836-3089954:-1
so has part: feature:3089836-3089954:-1:exon
subclass of: SO_0000573

120353746
type: Gene
SIO_000068: ncbigene

position:3089836:-1
position: 3089836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3089954:-1
position: 3089954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3089836-3089954:-1:exon

LOC120353746
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 108931
gene: LOC120353746
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005572563.1
SIO_010081: LOC120353746
subclass of: SO_0000673
so part of: LOC120353746
location: complement(3089836..3089954)
location: region:3089836-3089954:-1
so has part: feature:3089836-3089954:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3089836-3089954:-1:exon

LOC120353524
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353524
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3090265..3091740)
location: region:3090265-3091740:-1
so has part: feature:3090265-3091740:-1:exon
subclass of: SO_0000011

120353524
type: Gene
SIO_000068: ncbigene

position:3090265:-1
position: 3090265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3091740:-1
position: 3091740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3090265-3091740:-1:exon

LOC120353524
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC120353524
product: uncharacterized LOC120353524
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XR_005572433.1
SIO_010081: LOC120353524
subclass of: SO_0000673
so part of: LOC120353524
location: complement(join(3090265..3090370,3091366..3091740))
location: region:3090265-3091740:-1
so has part: feature:3091366-3091740:-1:exon
so has part: feature:3090265-3090370:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3091366-3091740:-1:exon

position:3091366:-1
position: 3091366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3090265-3090370:-1:exon

position:3090370:-1
position: 3090370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120353754
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353754
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3090905..3091097)
location: region:3090905-3091097:-1
so has part: feature:3090905-3091097:-1:exon
subclass of: SO_0000623

120353754
type: Gene
SIO_000068: ncbigene

position:3090905:-1
position: 3090905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3091097:-1
position: 3091097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3090905-3091097:-1:exon

LOC120353754
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: snRNA
gene: LOC120353754
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005572570.1
SIO_010081: LOC120353754
subclass of: SO_0000673
so part of: LOC120353754
location: complement(3090905..3091097)
location: region:3090905-3091097:-1
so has part: feature:3090905-3091097:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3090905-3091097:-1:exon

LOC120353525
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353525
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3092532..3095722
location: region:3092532-3095722:1
so has part: feature:3092532-3095722:1:exon
subclass of: SO_0000011

120353525
type: Gene
SIO_000068: ncbigene

position:3092532:1
position: 3092532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3095722:1
position: 3095722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3092532-3095722:1:exon

LOC120353525
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC120353525
product: uncharacterized LOC120353525
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XR_005572434.1
SIO_010081: LOC120353525
subclass of: SO_0000673
so part of: LOC120353525
location: join(3092532..3092667,3094579..3095722)
location: region:3092532-3095722:1
so has part: feature:3092532-3092667:1:exon
so has part: feature:3094579-3095722:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3092532-3092667:1:exon

position:3092667:1
position: 3092667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3094579-3095722:1:exon

position:3094579:1
position: 3094579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111053455
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111053455
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3137867..3146598
location: region:3137867-3146598:1
so has part: feature:3137867-3146598:1:exon
subclass of: SO_0000010

111053455
type: Gene
SIO_000068: ncbigene

position:3137867:1
position: 3137867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3146598:1
position: 3146598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3137867-3146598:1:exon

LOC111053455
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111053455
product: uncharacterized LOC111053455
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_039437418.1
SIO_010081: LOC111053455
subclass of: SO_0000673
so part of: LOC111053455
location: join(3137867..3137894,3145149..3146598)
location: region:3137867-3146598:1
so has part: feature:3137867-3137894:1:exon
so has part: feature:3145149-3146598:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3137867-3137894:1:exon

position:3137894:1
position: 3137894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3145149-3146598:1:exon

position:3145149:1
position: 3145149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111053455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111053455
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111053455
translation: MDVVASFPEEVTDMVFSHLQATDLEYCCGVSQLWRRTIERFKQRQRARLKYNWQHGKYSVNCSPISIGLNIQIGLRFKEYEFEVVPVNDPCDQVFPVYMYFKDPGCSGAEVLSIINIDSNSRIKLHQLPRTSSEMSVVIVVGDSIAWLEPSAVLKHYNAELASNGSKVETFGKHDDSRTDEDFEGVEKYKSLTMDRNHIAVVSNDRFVKVWCKKSHKKIITKRCVQPKISLSDGCLIIASYIGERLEKSVKIYCTEIEIHNLQHDANNTLLHTFNLDGIVESTHSKERFIFIVFSLHNHKIQVRDKKNFTVIYSYDYNLSLKNVFDDYIVVKGLTKGEQVFSEFGIPYGWRHDYYYKILTLASGEWSTEIPSRDKNLFTVFENIAVVRSVSDKSLYVLDWKRFTKLYTLRIPEHVSDDFEVINVTEWRIIVFDSESNQFIIFKFG
SIO_010081: LOC111053455
subclass of: SO_0000673
so part of: LOC111053455
location: 3145165..3146502
location: region:3145165-3146502:1
so has part: feature:3145165-3146502:1:exon

XP_039293352.1
type: Protein
SIO_000068: ncbiprotein

position:3145165:1
position: 3145165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3146502:1
position: 3146502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3145165-3146502:1:exon

LOC111045343
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111045343
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3150743..3162630
location: region:3150743-3162630:1
so has part: feature:3150743-3162630:1:exon
subclass of: SO_0000010

111045343
type: Gene
SIO_000068: ncbigene

position:3150743:1
position: 3150743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3162630:1
position: 3162630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3150743-3162630:1:exon

LOC111045343
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111045343
product: ketohexokinase-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_039437421.1
SIO_010081: LOC111045343
subclass of: SO_0000673
so part of: LOC111045343
location: join(3150743..3150761,3152143..3152259,3153865..3154072,3157372..3157601,3160092..3160249,3162295..3162626)
location: region:3150743-3162626:1
so has part: feature:3150743-3150761:1:exon
so has part: feature:3152143-3152259:1:exon
so has part: feature:3153865-3154072:1:exon
so has part: feature:3157372-3157601:1:exon
so has part: feature:3160092-3160249:1:exon
so has part: feature:3162295-3162626:1:exon

position:3162626:1
position: 3162626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3150743-3150761:1:exon

position:3150761:1
position: 3150761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3152143-3152259:1:exon

position:3152143:1
position: 3152143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3152259:1
position: 3152259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3153865-3154072:1:exon

position:3153865:1
position: 3153865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3154072:1
position: 3154072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3157372-3157601:1:exon

position:3157372:1
position: 3157372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3157601:1
position: 3157601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3160092-3160249:1:exon

position:3160092:1
position: 3160092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3160249:1
position: 3160249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3162295-3162626:1:exon

position:3162295:1
position: 3162295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111045343
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111045343
product: ketohexokinase-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_039437422.1
SIO_010081: LOC111045343
subclass of: SO_0000673
so part of: LOC111045343
location: join(3150821..3151176,3153865..3154072,3157372..3157601,3160092..3160249,3162295..3162630)
location: region:3150821-3162630:1
so has part: feature:3150821-3151176:1:exon
so has part: feature:3153865-3154072:1:exon
so has part: feature:3157372-3157601:1:exon
so has part: feature:3160092-3160249:1:exon
so has part: feature:3162295-3162630:1:exon

position:3150821:1
position: 3150821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3150821-3151176:1:exon

position:3151176:1
position: 3151176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3153865-3154072:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3157372-3157601:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3160092-3160249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3162295-3162630:1:exon

LOC111045343
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111045343
product: ketohexokinase-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_039437420.1
SIO_010081: LOC111045343
subclass of: SO_0000673
so part of: LOC111045343
location: join(3150822..3151176,3152143..3152259,3153865..3154072,3157372..3157601,3160092..3160249,3162295..3162624)
location: region:3150822-3162624:1
so has part: feature:3150822-3151176:1:exon
so has part: feature:3152143-3152259:1:exon
so has part: feature:3153865-3154072:1:exon
so has part: feature:3157372-3157601:1:exon
so has part: feature:3160092-3160249:1:exon
so has part: feature:3162295-3162624:1:exon

position:3150822:1
position: 3150822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3162624:1
position: 3162624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3150822-3151176:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3152143-3152259:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3153865-3154072:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3157372-3157601:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3160092-3160249:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3162295-3162624:1:exon

LOC111045343
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111045343
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ketohexokinase-like isoform X1
translation: MKPRKILCVGLVCVDIVQVCECFPDEDSDRRSVDHYMQRGGNASNMCTVLSQLGADCEFLGSMSNDLFSEFAIKDFSENNISTENCICHIGQDLPLSTVIINKQNGSRTIIHSNKSFPELKIHEFEKIDFSAYSWVHFEGRNIKQTTEMMKFLLEWREKSTIMLKISVEIEKPRSEQEILITLADVVLLGKDFAIFSGCNSMSETIDKFRHTTRNGATLISVWGTEGATGYTDNIGLKHSPAFLQQKTVDTLGAGDTFAAALIHSLNEGHELDKSVEFACKVAGAKTGIKGFSQLKTVCQGILN
SIO_010081: LOC111045343
subclass of: SO_0000673
so part of: LOC111045343
location: join(3151085..3151176,3152143..3152259,3153865..3154072,3157372..3157601,3160092..3160249,3162295..3162404)
location: region:3151085-3162404:1
so has part: feature:3151085-3151176:1:exon
so has part: feature:3152143-3152259:1:exon
so has part: feature:3153865-3154072:1:exon
so has part: feature:3157372-3157601:1:exon
so has part: feature:3160092-3160249:1:exon
so has part: feature:3162295-3162404:1:exon

XP_039293354.1
type: Protein
SIO_000068: ncbiprotein

position:3151085:1
position: 3151085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3162404:1
position: 3162404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3151085-3151176:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3152143-3152259:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3153865-3154072:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3157372-3157601:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3160092-3160249:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3162295-3162404:1:exon

LOC111045343
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111045343
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ketohexokinase-like isoform X3
translation: MKPRKILCVGLVCVDIVQVCECFPDEDSDRRFAIKDFSENNISTENCICHIGQDLPLSTVIINKQNGSRTIIHSNKSFPELKIHEFEKIDFSAYSWVHFEGRNIKQTTEMMKFLLEWREKSTIMLKISVEIEKPRSEQEILITLADVVLLGKDFAIFSGCNSMSETIDKFRHTTRNGATLISVWGTEGATGYTDNIGLKHSPAFLQQKTVDTLGAGDTFAAALIHSLNEGHELDKSVEFACKVAGAKTGIKGFSQLKTVCQGILN
SIO_010081: LOC111045343
subclass of: SO_0000673
so part of: LOC111045343
location: join(3151085..3151176,3153865..3154072,3157372..3157601,3160092..3160249,3162295..3162404)
location: region:3151085-3162404:1
so has part: feature:3151085-3151176:1:exon
so has part: feature:3153865-3154072:1:exon
so has part: feature:3157372-3157601:1:exon
so has part: feature:3160092-3160249:1:exon
so has part: feature:3162295-3162404:1:exon

XP_039293356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3151085-3151176:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3153865-3154072:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3157372-3157601:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3160092-3160249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3162295-3162404:1:exon

LOC111045343
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111045343
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ketohexokinase-like isoform X2
translation: MQRGGNASNMCTVLSQLGADCEFLGSMSNDLFSEFAIKDFSENNISTENCICHIGQDLPLSTVIINKQNGSRTIIHSNKSFPELKIHEFEKIDFSAYSWVHFEGRNIKQTTEMMKFLLEWREKSTIMLKISVEIEKPRSEQEILITLADVVLLGKDFAIFSGCNSMSETIDKFRHTTRNGATLISVWGTEGATGYTDNIGLKHSPAFLQQKTVDTLGAGDTFAAALIHSLNEGHELDKSVEFACKVAGAKTGIKGFSQLKTVCQGILN
SIO_010081: LOC111045343
subclass of: SO_0000673
so part of: LOC111045343
location: join(3152159..3152259,3153865..3154072,3157372..3157601,3160092..3160249,3162295..3162404)
location: region:3152159-3162404:1
so has part: feature:3152159-3152259:1:exon
so has part: feature:3153865-3154072:1:exon
so has part: feature:3157372-3157601:1:exon
so has part: feature:3160092-3160249:1:exon
so has part: feature:3162295-3162404:1:exon

XP_039293355.1
type: Protein
SIO_000068: ncbiprotein

position:3152159:1
position: 3152159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3152159-3152259:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3153865-3154072:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3157372-3157601:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3160092-3160249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3162295-3162404:1:exon

LOC111058820
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111058820
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3163818..3176456)
location: region:3163818-3176456:-1
so has part: feature:3163818-3176456:-1:exon
subclass of: SO_0000010

111058820
type: Gene
SIO_000068: ncbigene

position:3163818:-1
position: 3163818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3176456:-1
position: 3176456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3163818-3176456:-1:exon

LOC111058820
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111058820
product: chaperone protein DnaJ-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039438170.1
SIO_010081: LOC111058820
subclass of: SO_0000673
so part of: LOC111058820
location: complement(join(3163818..3163826,3165141..3165278,3166794..3166925,3174428..3174586,3176204..3176456))
location: region:3163818-3176456:-1
so has part: feature:3176204-3176456:-1:exon
so has part: feature:3174428-3174586:-1:exon
so has part: feature:3166794-3166925:-1:exon
so has part: feature:3165141-3165278:-1:exon
so has part: feature:3163818-3163826:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3176204-3176456:-1:exon

position:3176204:-1
position: 3176204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3174428-3174586:-1:exon

position:3174428:-1
position: 3174428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3174586:-1
position: 3174586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3166794-3166925:-1:exon

position:3166794:-1
position: 3166794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3166925:-1
position: 3166925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3165141-3165278:-1:exon

position:3165141:-1
position: 3165141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3165278:-1
position: 3165278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3163818-3163826:-1:exon

position:3163826:-1
position: 3163826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111058820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111058820
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chaperone protein DnaJ-like
translation: MELAPKRKPITNLLMGQESIKFMFKYFQTNLKTNHGFLRCEYCTFKTDELSVKKSYYLLGVPYGSDQETVRQAFVQLVKKYHPDSGSEKADPQRFQEIENAYRRLQKKFSEDRWKKNEGVGEYGLYYDEKKGAQKGVEEQNINCS
SIO_010081: LOC111058820
subclass of: SO_0000673
so part of: LOC111058820
location: complement(join(3163818..3163826,3165141..3165278,3166794..3166925,3174428..3174586))
location: region:3163818-3174586:-1
so has part: feature:3174428-3174586:-1:exon
so has part: feature:3166794-3166925:-1:exon
so has part: feature:3165141-3165278:-1:exon
so has part: feature:3163818-3163826:-1:exon

XP_039294104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3174428-3174586:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3166794-3166925:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3165141-3165278:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3163818-3163826:-1:exon

LOC111051789
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111051789
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3214646..3285799)
location: region:3214646-3285799:-1
so has part: feature:3214646-3285799:-1:exon
subclass of: SO_0000010

111051789
type: Gene
SIO_000068: ncbigene

position:3214646:-1
position: 3214646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3285799:-1
position: 3285799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3214646-3285799:-1:exon

LOC111051789
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111051789
product: ribosome biogenesis protein BMS1 homolog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 20 long SRA reads, 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039438171.1
SIO_010081: LOC111051789
subclass of: SO_0000673
so part of: LOC111051789
location: complement(join(3214646..3215240,3218903..3219115,3229307..3229314,3237687..3238002,3239549..3239657,3240460..3240590,3248919..3249107,3251860..3252018,3255195..3255371,3257361..3257560,3260261..3260478,3262278..3262568,3264383..3264510,3265649..3265852,3266995..3267123,3276554..3276809,3279074..3279222,3283640..3283830,3284879..3285002,3285564..3285799))
location: region:3214646-3285799:-1
so has part: feature:3285564-3285799:-1:exon
so has part: feature:3284879-3285002:-1:exon
so has part: feature:3283640-3283830:-1:exon
so has part: feature:3279074-3279222:-1:exon
so has part: feature:3276554-3276809:-1:exon
so has part: feature:3266995-3267123:-1:exon
so has part: feature:3265649-3265852:-1:exon
so has part: feature:3264383-3264510:-1:exon
so has part: feature:3262278-3262568:-1:exon
so has part: feature:3260261-3260478:-1:exon
so has part: feature:3257361-3257560:-1:exon
so has part: feature:3255195-3255371:-1:exon
so has part: feature:3251860-3252018:-1:exon
so has part: feature:3248919-3249107:-1:exon
so has part: feature:3240460-3240590:-1:exon
so has part: feature:3239549-3239657:-1:exon
so has part: feature:3237687-3238002:-1:exon
so has part: feature:3229307-3229314:-1:exon
so has part: feature:3218903-3219115:-1:exon
so has part: feature:3214646-3215240:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3285564-3285799:-1:exon

position:3285564:-1
position: 3285564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3284879-3285002:-1:exon

position:3284879:-1
position: 3284879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3285002:-1
position: 3285002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3283640-3283830:-1:exon

position:3283640:-1
position: 3283640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3283830:-1
position: 3283830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3279074-3279222:-1:exon

position:3279074:-1
position: 3279074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3279222:-1
position: 3279222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3276554-3276809:-1:exon

position:3276554:-1
position: 3276554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3276809:-1
position: 3276809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3266995-3267123:-1:exon

position:3266995:-1
position: 3266995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3267123:-1
position: 3267123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3265649-3265852:-1:exon

position:3265649:-1
position: 3265649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3265852:-1
position: 3265852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3264383-3264510:-1:exon

position:3264383:-1
position: 3264383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3264510:-1
position: 3264510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3262278-3262568:-1:exon

position:3262278:-1
position: 3262278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3262568:-1
position: 3262568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3260261-3260478:-1:exon

position:3260261:-1
position: 3260261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3260478:-1
position: 3260478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3257361-3257560:-1:exon

position:3257361:-1
position: 3257361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3257560:-1
position: 3257560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3255195-3255371:-1:exon

position:3255195:-1
position: 3255195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3255371:-1
position: 3255371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3251860-3252018:-1:exon

position:3251860:-1
position: 3251860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3252018:-1
position: 3252018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3248919-3249107:-1:exon

position:3248919:-1
position: 3248919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3249107:-1
position: 3249107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3240460-3240590:-1:exon

position:3240460:-1
position: 3240460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3240590:-1
position: 3240590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3239549-3239657:-1:exon

position:3239549:-1
position: 3239549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3239657:-1
position: 3239657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3237687-3238002:-1:exon

position:3237687:-1
position: 3237687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3238002:-1
position: 3238002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3229307-3229314:-1:exon

position:3229307:-1
position: 3229307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3229314:-1
position: 3229314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3218903-3219115:-1:exon

position:3218903:-1
position: 3218903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3219115:-1
position: 3219115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3214646-3215240:-1:exon

position:3215240:-1
position: 3215240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111051789
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111051789
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ribosome biogenesis protein BMS1 homolog
translation: MDDQNDGSKKSHKKPHSGRKAEKKDKKKNQHVQELTDAQRNPKAFTFNSAVRAERNFRRGQDIQTKKHHVPKVDRTPIEPPPILVVVVGPPKVGKSLLIHCLIKSFTKQPLTTLKGPVTVVTGKKRRITFMECNNDINSMIDLAKIADLVLLLIDASFGFEMEIFEFLNICQVHGMPKIMGVLTHLDMLKNTKALKKTKKTLKHRFWTEVYAGAKLFYLSGILHNEYLRNEVKNLGRFISVMKFRPLIWQMTHPYLLADRMEDLTSPEVLRQNDKADRTVSVYGYMRGIPLIKNSSVHIPGCGDFLLKDVSFLPDPCPLPDKLKKRALGEKERLIYAPFSGVGGIVYDKDAVYIELAGSHSHTKSSSGEQPVRDMVSNILESKNTLDSKIAQSEVQLFSNAAPILASEFQSDTTASNLPEGISLKHVDDNGRQRRKVIFNDEEDNMEVDGDEEDGDEEEDDDEGIEDDNSDSELSNQEDEEEEEEEEGGESEEEEEEEDGEEEKGKTSKSSKVKKADSEDDDDDSEEDDDDDDVSEEDDDDDDLMEDKTGLNWKSNLAQKAANAFLERQADSASLWKLVYGETNYQGVRGVRGKEEEDKEDEDLEEGLFKMVKQNEDKKILEKDLMDLEDVTKKINKEHSRDWSQEEVRNTIKDCFVTGKWKSSEDARKLLNGVKIDDDDDDDICDGDFEDLETGVKHEGKTDEPTDEAAVDDDKSKEKLAEKKKKLKEKFDVEYDDGKNGGDKTWYDELRREATEQAELNRKQFEDMDDWLRVQLEGFRAGLYVRIELDGVPCELVTNFDATYPLIVGSLQPGEENVGFVKARVKKHRWFERILKTNDPLILSLGWRRFQTIAVYAKLEDNMRHRMLKYTPQHIACMAHFWGPITRSGTGLLAVQDVAARQSGFRIAATGIVLDTNQTTEITKKLKLTGVPYKIYKKTAFIKDMFNSNLEVARFEGARIKTVSNIRGQIKKAESKPEGAFRATFEDKIQLSGECQFQMTFPVIHTIKIMVLFNLIIIIEILLLYFQEIKREPVVFKPLIIPRRLQKELPYRIKPKHRHNMRKNAPKIDRVAVVRDVEESKVASLMAKLKSNYKAKVRQQKRDTAARLKEHRQTHHLEEMQRQRKRADKIKAQHRKQAKKQAQSST
SIO_010081: LOC111051789
subclass of: SO_0000673
so part of: LOC111051789
location: complement(join(3215043..3215240,3218903..3219115,3229307..3229314,3237687..3238002,3239549..3239657,3240460..3240590,3248919..3249107,3251860..3252018,3255195..3255371,3257361..3257560,3260261..3260478,3262278..3262568,3264383..3264510,3265649..3265852,3266995..3267123,3276554..3276809,3279074..3279222,3283640..3283830,3284879..3285002,3285564..3285615))
location: region:3215043-3285615:-1
so has part: feature:3285564-3285615:-1:exon
so has part: feature:3284879-3285002:-1:exon
so has part: feature:3283640-3283830:-1:exon
so has part: feature:3279074-3279222:-1:exon
so has part: feature:3276554-3276809:-1:exon
so has part: feature:3266995-3267123:-1:exon
so has part: feature:3265649-3265852:-1:exon
so has part: feature:3264383-3264510:-1:exon
so has part: feature:3262278-3262568:-1:exon
so has part: feature:3260261-3260478:-1:exon
so has part: feature:3257361-3257560:-1:exon
so has part: feature:3255195-3255371:-1:exon
so has part: feature:3251860-3252018:-1:exon
so has part: feature:3248919-3249107:-1:exon
so has part: feature:3240460-3240590:-1:exon
so has part: feature:3239549-3239657:-1:exon
so has part: feature:3237687-3238002:-1:exon
so has part: feature:3229307-3229314:-1:exon
so has part: feature:3218903-3219115:-1:exon
so has part: feature:3215043-3215240:-1:exon

XP_039294105.1
type: Protein
SIO_000068: ncbiprotein

position:3215043:-1
position: 3215043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3285615:-1
position: 3285615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3285564-3285615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3284879-3285002:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3283640-3283830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3279074-3279222:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3276554-3276809:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3266995-3267123:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3265649-3265852:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3264383-3264510:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3262278-3262568:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3260261-3260478:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3257361-3257560:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3255195-3255371:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3251860-3252018:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3248919-3249107:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3240460-3240590:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3239549-3239657:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3237687-3238002:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3229307-3229314:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3218903-3219115:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3215043-3215240:-1:exon

LOC120353526
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353526
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3241141..3244160)
location: region:3241141-3244160:-1
so has part: feature:3241141-3244160:-1:exon
subclass of: SO_0000010

120353526
type: Gene
SIO_000068: ncbigene

position:3241141:-1
position: 3241141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3244160:-1
position: 3244160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3241141-3244160:-1:exon

LOC120353526
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120353526
product: ribosome biogenesis protein BMS1 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_039437423.1
SIO_010081: LOC120353526
subclass of: SO_0000673
so part of: LOC120353526
location: complement(join(3241141..3241238,3243976..3244160))
location: region:3241141-3244160:-1
so has part: feature:3243976-3244160:-1:exon
so has part: feature:3241141-3241238:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3243976-3244160:-1:exon

position:3243976:-1
position: 3243976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3241141-3241238:-1:exon

position:3241238:-1
position: 3241238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120353526
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120353526
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome biogenesis protein BMS1 homolog
translation: MDDWLRVQLEGFRAGLYVRIELDGVPCELVTNFDATYPLIVGSLQPGEENVGFVKARVKNTVGSREF
SIO_010081: LOC120353526
subclass of: SO_0000673
so part of: LOC120353526
location: complement(join(3241200..3241238,3243976..3244140))
location: region:3241200-3244140:-1
so has part: feature:3243976-3244140:-1:exon
so has part: feature:3241200-3241238:-1:exon

XP_039293357.1
type: Protein
SIO_000068: ncbiprotein

position:3241200:-1
position: 3241200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3244140:-1
position: 3244140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3243976-3244140:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3241200-3241238:-1:exon

LOC111051782
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111051782
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3300675..3695020)
location: region:3300675-3695020:-1
so has part: feature:3300675-3695020:-1:exon
subclass of: SO_0000010

111051782
type: Gene
SIO_000068: ncbigene

position:3300675:-1
position: 3300675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3695020:-1
position: 3695020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3300675-3695020:-1:exon

LOC111051782
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111051782
product: calcium uniporter protein, mitochondrial, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_039437436.1
SIO_010081: LOC111051782
subclass of: SO_0000673
so part of: LOC111051782
location: complement(join(3300675..3301516,3305088..3305291,3311549..3311695,3315762..3315886,3320126..3320308,3626399..3626576,3694919..3695020))
location: region:3300675-3695020:-1
so has part: feature:3694919-3695020:-1:exon
so has part: feature:3626399-3626576:-1:exon
so has part: feature:3320126-3320308:-1:exon
so has part: feature:3315762-3315886:-1:exon
so has part: feature:3311549-3311695:-1:exon
so has part: feature:3305088-3305291:-1:exon
so has part: feature:3300675-3301516:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3694919-3695020:-1:exon

position:3694919:-1
position: 3694919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3626399-3626576:-1:exon

position:3626399:-1
position: 3626399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3626576:-1
position: 3626576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3320126-3320308:-1:exon

position:3320126:-1
position: 3320126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3320308:-1
position: 3320308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3315762-3315886:-1:exon

position:3315762:-1
position: 3315762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3315886:-1
position: 3315886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3311549-3311695:-1:exon

position:3311549:-1
position: 3311549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3311695:-1
position: 3311695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3305088-3305291:-1:exon

position:3305088:-1
position: 3305088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3305291:-1
position: 3305291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3300675-3301516:-1:exon

position:3301516:-1
position: 3301516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111051782
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111051782
product: calcium uniporter protein, mitochondrial, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_039437434.1
SIO_010081: LOC111051782
subclass of: SO_0000673
so part of: LOC111051782
location: complement(join(3300675..3301516,3305088..3305291,3311549..3311695,3315762..3315886,3320126..3320308,3361998..3362096,3626399..3626576,3694919..3695020))
location: region:3300675-3695020:-1
so has part: feature:3694919-3695020:-1:exon
so has part: feature:3626399-3626576:-1:exon
so has part: feature:3361998-3362096:-1:exon
so has part: feature:3320126-3320308:-1:exon
so has part: feature:3315762-3315886:-1:exon
so has part: feature:3311549-3311695:-1:exon
so has part: feature:3305088-3305291:-1:exon
so has part: feature:3300675-3301516:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3694919-3695020:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3626399-3626576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3361998-3362096:-1:exon

position:3361998:-1
position: 3361998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3362096:-1
position: 3362096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3320126-3320308:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3315762-3315886:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3311549-3311695:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3305088-3305291:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3300675-3301516:-1:exon

LOC111051782
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111051782
product: calcium uniporter protein, mitochondrial, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_039437435.1
SIO_010081: LOC111051782
subclass of: SO_0000673
so part of: LOC111051782
location: complement(join(3300758..3301516,3305088..3305291,3311549..3311695,3315762..3315886,3320126..3320308,3361998..3362096,3626399..3626576,3694781..3694912))
location: region:3300758-3694912:-1
so has part: feature:3694781-3694912:-1:exon
so has part: feature:3626399-3626576:-1:exon
so has part: feature:3361998-3362096:-1:exon
so has part: feature:3320126-3320308:-1:exon
so has part: feature:3315762-3315886:-1:exon
so has part: feature:3311549-3311695:-1:exon
so has part: feature:3305088-3305291:-1:exon
so has part: feature:3300758-3301516:-1:exon

position:3300758:-1
position: 3300758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3694912:-1
position: 3694912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3694781-3694912:-1:exon

position:3694781:-1
position: 3694781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3626399-3626576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3361998-3362096:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3320126-3320308:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3315762-3315886:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3311549-3311695:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3305088-3305291:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3300758-3301516:-1:exon

LOC111051782
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111051782
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium uniporter protein, mitochondrial isoform X2
translation: MAVGSVVSRSKVLLTVDLNRVFSLSYFVGTGKCHERVQQHRTWSSGGGGSEGGGPPLPLVAPPETSSPSPYTISVRNNSSSIRNDGLSSSDTITGENLTKRSSTSTGTNQTSDSYNIKADQQLRRVEDSVRVEVSCSNIGMPQLTVPLPSRRERCRFTLRPVSHTVGDLLAMLRHEDKGIDRVTVTTNDGVRIASSSSIESLLMDDFKLTINDVEYNVDVPDRNMLNMTKDDLNRLSDVRTLVHQLYEALNVEEHQIKKERELVTQLESLKVSLEPLEKKRQSLEAVAIRRTTVLTWFGLSLMSVQFGILARLTWWEYSWDIMEPVTYFVTYGTAMAAYAYFVLTKQEYLLPDVRDRQHLITLHKRANKIGLDVTRYNSLKDEIARIEHDLARLRDPLHLHVPPPSTAAGFPSTGAAGLRSGLISQSAANSPLERLRSILNRIKRS
SIO_010081: LOC111051782
subclass of: SO_0000673
so part of: LOC111051782
location: complement(join(3301217..3301516,3305088..3305291,3311549..3311695,3315762..3315886,3320126..3320308,3361998..3362096,3626399..3626576,3694781..3694885))
location: region:3301217-3694885:-1
so has part: feature:3694781-3694885:-1:exon
so has part: feature:3626399-3626576:-1:exon
so has part: feature:3361998-3362096:-1:exon
so has part: feature:3320126-3320308:-1:exon
so has part: feature:3315762-3315886:-1:exon
so has part: feature:3311549-3311695:-1:exon
so has part: feature:3305088-3305291:-1:exon
so has part: feature:3301217-3301516:-1:exon

XP_039293369.1
type: Protein
SIO_000068: ncbiprotein

position:3301217:-1
position: 3301217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3694885:-1
position: 3694885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3694781-3694885:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3626399-3626576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3361998-3362096:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3320126-3320308:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3315762-3315886:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3311549-3311695:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3305088-3305291:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3301217-3301516:-1:exon

LOC111051782
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111051782
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium uniporter protein, mitochondrial isoform X1
translation: MPQLTVPLPSRRERCRFTLRPVSHTVGDLLAMLRHEDKGIDRVTVTTNDGVRIASSSSIESLLMDDFKLTINDVEYNVDVPDRNMLNMTKDDLNRLSDVRTLVHQLYEALNVEEHQIKKERELVTQLESLKVSLEPLEKKRQSLEAVAIRRTTVLTWFGLSLMSVQFGILARLTWWEYSWDIMEPVTYFVTYGTAMAAYAYFVLTKQEYLLPDVRDRQHLITLHKRANKIGLDVTRYNSLKDEIARIEHDLARLRDPLHLHVPPPSTAAGFPSTGAAGLRSGLISQSAANSPLERLRSILNRIKRS
SIO_010081: LOC111051782
subclass of: SO_0000673
so part of: LOC111051782
location: complement(join(3301217..3301516,3305088..3305291,3311549..3311695,3315762..3315886,3320126..3320270))
location: region:3301217-3320270:-1
so has part: feature:3320126-3320270:-1:exon
so has part: feature:3315762-3315886:-1:exon
so has part: feature:3311549-3311695:-1:exon
so has part: feature:3305088-3305291:-1:exon
so has part: feature:3301217-3301516:-1:exon

XP_039293368.1
type: Protein
SIO_000068: ncbiprotein

position:3320270:-1
position: 3320270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3320126-3320270:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3315762-3315886:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3311549-3311695:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3305088-3305291:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3301217-3301516:-1:exon

LOC111051782
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111051782
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium uniporter protein, mitochondrial isoform X1
translation: MPQLTVPLPSRRERCRFTLRPVSHTVGDLLAMLRHEDKGIDRVTVTTNDGVRIASSSSIESLLMDDFKLTINDVEYNVDVPDRNMLNMTKDDLNRLSDVRTLVHQLYEALNVEEHQIKKERELVTQLESLKVSLEPLEKKRQSLEAVAIRRTTVLTWFGLSLMSVQFGILARLTWWEYSWDIMEPVTYFVTYGTAMAAYAYFVLTKQEYLLPDVRDRQHLITLHKRANKIGLDVTRYNSLKDEIARIEHDLARLRDPLHLHVPPPSTAAGFPSTGAAGLRSGLISQSAANSPLERLRSILNRIKRS
SIO_010081: LOC111051782
subclass of: SO_0000673
so part of: LOC111051782
location: complement(join(3301217..3301516,3305088..3305291,3311549..3311695,3315762..3315886,3320126..3320270))
location: region:3301217-3320270:-1
so has part: feature:3320126-3320270:-1:exon
so has part: feature:3315762-3315886:-1:exon
so has part: feature:3311549-3311695:-1:exon
so has part: feature:3305088-3305291:-1:exon
so has part: feature:3301217-3301516:-1:exon

XP_039293370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3320126-3320270:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3315762-3315886:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3311549-3311695:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3305088-3305291:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3301217-3301516:-1:exon

LOC111055756
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111055756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3402826..3606921
location: region:3402826-3606921:1
so has part: feature:3402826-3606921:1:exon
subclass of: SO_0000010

111055756
type: Gene
SIO_000068: ncbigene

position:3402826:1
position: 3402826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3606921:1
position: 3606921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3402826-3606921:1:exon

LOC111055756
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111055756
product: myb-like protein X, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_039437431.1
SIO_010081: LOC111055756
subclass of: SO_0000673
so part of: LOC111055756
location: join(3402826..3403479,3559986..3560216,3571458..3571614,3590232..3590640,3591889..3592374,3594300..3594645,3597712..3598032,3606769..3606921)
location: region:3402826-3606921:1
so has part: feature:3402826-3403479:1:exon
so has part: feature:3559986-3560216:1:exon
so has part: feature:3571458-3571614:1:exon
so has part: feature:3590232-3590640:1:exon
so has part: feature:3591889-3592374:1:exon
so has part: feature:3594300-3594645:1:exon
so has part: feature:3597712-3598032:1:exon
so has part: feature:3606769-3606921:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3402826-3403479:1:exon

position:3403479:1
position: 3403479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3559986-3560216:1:exon

position:3559986:1
position: 3559986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3560216:1
position: 3560216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3571458-3571614:1:exon

position:3571458:1
position: 3571458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3571614:1
position: 3571614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3590232-3590640:1:exon

position:3590232:1
position: 3590232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3590640:1
position: 3590640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3591889-3592374:1:exon

position:3591889:1
position: 3591889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3592374:1
position: 3592374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3594300-3594645:1:exon

position:3594300:1
position: 3594300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3594645:1
position: 3594645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3597712-3598032:1:exon

position:3597712:1
position: 3597712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3598032:1
position: 3598032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3606769-3606921:1:exon

position:3606769:1
position: 3606769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111055756
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111055756
product: myb-like protein X, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_039437432.1
SIO_010081: LOC111055756
subclass of: SO_0000673
so part of: LOC111055756
location: join(3475007..3475049,3559986..3560216,3571458..3571614,3590232..3590640,3591889..3592374,3594300..3594645,3597712..3598032,3606769..3606921)
location: region:3475007-3606921:1
so has part: feature:3475007-3475049:1:exon
so has part: feature:3559986-3560216:1:exon
so has part: feature:3571458-3571614:1:exon
so has part: feature:3590232-3590640:1:exon
so has part: feature:3591889-3592374:1:exon
so has part: feature:3594300-3594645:1:exon
so has part: feature:3597712-3598032:1:exon
so has part: feature:3606769-3606921:1:exon

position:3475007:1
position: 3475007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3475007-3475049:1:exon

position:3475049:1
position: 3475049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3559986-3560216:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3571458-3571614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3590232-3590640:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3591889-3592374:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3594300-3594645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3597712-3598032:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3606769-3606921:1:exon

LOC111055756
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111055756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb-like protein X
translation: MQEREEEIRKPRVIEDRLVQKNGIEEKDEEREEQQEELGKKETVIMTNGSRKVNQEKAPILGSRYDKVYRRKERPFGATYRRREQQQKEKLKQKFEDYGHRQQSKDVNGDKEEEEEGGDENEEKQKAVEEIQKIHETITPNSTINSNTSSSTITSSSSPNLGLPPQETTYYEDEYCYEPEKKLSTSKTVLRTRSMINLDAEEGKPFVRKTLSDLLVADCKHTTDSNPAINGNNRMSNGDAKFRYLNAFNSRSTTNISTLPPSRTPQSRGPLGTRQMSTSTFSLRPQGGNQSDCEEGEEEGENDKEELRRKLRHLLTNDRLVIKEGRRNMDTATLRRCFYHPVRVNRELIDEELPDPDQVKLARDKFERVLKIRGPDAPRSATLPLSRTASDKRPTPEIRVPPPQPPPHPTVPKWTDTGSLSSGVSSGAEDSSSSCGGDDDMHQVSSEIMNRIRACGTTVTYYGGKVISQSSGPPSPLTSTIMEEIKFRLEVRDRMQFHEEFATNGDH
SIO_010081: LOC111055756
subclass of: SO_0000673
so part of: LOC111055756
location: join(3590399..3590640,3591889..3592374,3594300..3594645,3597712..3598032,3606769..3606897)
location: region:3590399-3606897:1
so has part: feature:3590399-3590640:1:exon
so has part: feature:3591889-3592374:1:exon
so has part: feature:3594300-3594645:1:exon
so has part: feature:3597712-3598032:1:exon
so has part: feature:3606769-3606897:1:exon

XP_039293365.1
type: Protein
SIO_000068: ncbiprotein

position:3590399:1
position: 3590399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3606897:1
position: 3606897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3590399-3590640:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3591889-3592374:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3594300-3594645:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3597712-3598032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3606769-3606897:1:exon

LOC111055756
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111055756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb-like protein X
translation: MQEREEEIRKPRVIEDRLVQKNGIEEKDEEREEQQEELGKKETVIMTNGSRKVNQEKAPILGSRYDKVYRRKERPFGATYRRREQQQKEKLKQKFEDYGHRQQSKDVNGDKEEEEEGGDENEEKQKAVEEIQKIHETITPNSTINSNTSSSTITSSSSPNLGLPPQETTYYEDEYCYEPEKKLSTSKTVLRTRSMINLDAEEGKPFVRKTLSDLLVADCKHTTDSNPAINGNNRMSNGDAKFRYLNAFNSRSTTNISTLPPSRTPQSRGPLGTRQMSTSTFSLRPQGGNQSDCEEGEEEGENDKEELRRKLRHLLTNDRLVIKEGRRNMDTATLRRCFYHPVRVNRELIDEELPDPDQVKLARDKFERVLKIRGPDAPRSATLPLSRTASDKRPTPEIRVPPPQPPPHPTVPKWTDTGSLSSGVSSGAEDSSSSCGGDDDMHQVSSEIMNRIRACGTTVTYYGGKVISQSSGPPSPLTSTIMEEIKFRLEVRDRMQFHEEFATNGDH
SIO_010081: LOC111055756
subclass of: SO_0000673
so part of: LOC111055756
location: join(3590399..3590640,3591889..3592374,3594300..3594645,3597712..3598032,3606769..3606897)
location: region:3590399-3606897:1
so has part: feature:3590399-3590640:1:exon
so has part: feature:3591889-3592374:1:exon
so has part: feature:3594300-3594645:1:exon
so has part: feature:3597712-3598032:1:exon
so has part: feature:3606769-3606897:1:exon

XP_039293366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3590399-3590640:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3591889-3592374:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3594300-3594645:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3597712-3598032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3606769-3606897:1:exon

LOC120348753
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120348753
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3696629..3726146
location: region:3696629-3726146:1
so has part: feature:3696629-3726146:1:exon
subclass of: SO_0000010

120348753
type: Gene
SIO_000068: ncbigene

position:3696629:1
position: 3696629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3726146:1
position: 3726146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3696629-3726146:1:exon

LOC120348753
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC120348753
product: dnaJ homolog subfamily C member 28-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 14 long SRA reads, 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_039437440.1
SIO_010081: LOC120348753
subclass of: SO_0000673
so part of: LOC120348753
location: join(3696629..3696784,3702552..3702683,3704538..3704675,3712426..3712643,3720634..3720784,3724436..3724637,3725298..3726146)
location: region:3696629-3726146:1
so has part: feature:3696629-3696784:1:exon
so has part: feature:3702552-3702683:1:exon
so has part: feature:3704538-3704675:1:exon
so has part: feature:3712426-3712643:1:exon
so has part: feature:3720634-3720784:1:exon
so has part: feature:3724436-3724637:1:exon
so has part: feature:3725298-3726146:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3696629-3696784:1:exon

position:3696784:1
position: 3696784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3702552-3702683:1:exon

position:3702552:1
position: 3702552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3702683:1
position: 3702683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3704538-3704675:1:exon

position:3704538:1
position: 3704538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3704675:1
position: 3704675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3712426-3712643:1:exon

position:3712426:1
position: 3712426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3712643:1
position: 3712643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3720634-3720784:1:exon

position:3720634:1
position: 3720634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3720784:1
position: 3720784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3724436-3724637:1:exon

position:3724436:1
position: 3724436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3724637:1
position: 3724637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3725298-3726146:1:exon

position:3725298:1
position: 3725298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120348753
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC120348753
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 28-like
translation: MFKYFQTNLKKNHGFLRCEYCTFKTDELSVKKSYYLLGVPYGSDQETVRQAFVQLVKKYHPDSGSEKADPQRFQEIENAYRRLQKKFSEDRWKKNEGVGEYGLYYDEKKGAQKGVEEQNINHTAPQHRQYLTYGGWGTGTPSQRECHYQKSRAETAVKNVFQHRMDKVISETVCTEEQALALKDKAEAKKIKTRYGLERLVEDLIQESMNKGEFDNLPGQGKPLGRQFDHHNPYVDLVTHKLNQVLIDNGFVPEWIQLQKEIRESEEEIRKKLLEERSRLGRLPLSRDDQIRWSRILDNTQIHVDKLNKKIGKYNLVVPMLQKQVVTFNLLREAQRILEEGEHSKGEQSKPNQHQTSTTKKEDDGSGLFGLFSFLMRK
SIO_010081: LOC120348753
subclass of: SO_0000673
so part of: LOC120348753
location: join(3696692..3696784,3702552..3702683,3704538..3704675,3712426..3712643,3720634..3720784,3724436..3724637,3725298..3725500)
location: region:3696692-3725500:1
so has part: feature:3696692-3696784:1:exon
so has part: feature:3702552-3702683:1:exon
so has part: feature:3704538-3704675:1:exon
so has part: feature:3712426-3712643:1:exon
so has part: feature:3720634-3720784:1:exon
so has part: feature:3724436-3724637:1:exon
so has part: feature:3725298-3725500:1:exon

XP_039293374.1
type: Protein
SIO_000068: ncbiprotein

position:3696692:1
position: 3696692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3725500:1
position: 3725500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3696692-3696784:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3702552-3702683:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3704538-3704675:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3712426-3712643:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3720634-3720784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3724436-3724637:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3725298-3725500:1:exon

LOC120353528
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC120353528
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3702570..3732927)
location: region:3702570-3732927:-1
so has part: feature:3702570-3732927:-1:exon
subclass of: SO_0000011

120353528
type: Gene
SIO_000068: ncbigene

position:3702570:-1
position: 3702570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3732927:-1
position: 3732927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3702570-3732927:-1:exon

LOC120353528
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 108931
nc RNA class: lncRNA
gene: LOC120353528
product: uncharacterized LOC120353528
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_005572436.1
SIO_010081: LOC120353528
subclass of: SO_0000673
so part of: LOC120353528
location: complement(join(3702570..3702724,3717389..3717478,3732497..3732927))
location: region:3702570-3732927:-1
so has part: feature:3732497-3732927:-1:exon
so has part: feature:3717389-3717478:-1:exon
so has part: feature:3702570-3702724:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3732497-3732927:-1:exon

position:3732497:-1
position: 3732497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3717389-3717478:-1:exon

position:3717389:-1
position: 3717389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3717478:-1
position: 3717478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3702570-3702724:-1:exon

position:3702724:-1
position: 3702724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111058182
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111058182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3733305..4003023)
location: region:3733305-4003023:-1
so has part: feature:3733305-4003023:-1:exon
subclass of: SO_0000010

111058182
type: Gene
SIO_000068: ncbigene

position:3733305:-1
position: 3733305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4003023:-1
position: 4003023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3733305-4003023:-1:exon

LOC111058182
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111058182
product: DNA N6-methyl adenine demethylase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 82 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_039437424.1
SIO_010081: LOC111058182
subclass of: SO_0000673
so part of: LOC111058182
location: complement(join(3733305..3739449,3741048..3741182,3742246..3743711,3744258..3744429,3747819..3747912,3748435..3748554,3749177..3749331,3751580..3751807,3753631..3753810,3756927..3757122,3758753..3758976,3760633..3760810,3763680..3765420,3766557..3767845,3768528..3768715,3770166..3770407,3772434..3772734,3822226..3822348,3868785..3868877,3983284..3984485,4002835..4003023))
location: region:3733305-4003023:-1
so has part: feature:4002835-4003023:-1:exon
so has part: feature:3983284-3984485:-1:exon
so has part: feature:3868785-3868877:-1:exon
so has part: feature:3822226-3822348:-1:exon
so has part: feature:3772434-3772734:-1:exon
so has part: feature:3770166-3770407:-1:exon
so has part: feature:3768528-3768715:-1:exon
so has part: feature:3766557-3767845:-1:exon
so has part: feature:3763680-3765420:-1:exon
so has part: feature:3760633-3760810:-1:exon
so has part: feature:3758753-3758976:-1:exon
so has part: feature:3756927-3757122:-1:exon
so has part: feature:3753631-3753810:-1:exon
so has part: feature:3751580-3751807:-1:exon
so has part: feature:3749177-3749331:-1:exon
so has part: feature:3748435-3748554:-1:exon
so has part: feature:3747819-3747912:-1:exon
so has part: feature:3744258-3744429:-1:exon
so has part: feature:3742246-3743711:-1:exon
so has part: feature:3741048-3741182:-1:exon
so has part: feature:3733305-3739449:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4002835-4003023:-1:exon

position:4002835:-1
position: 4002835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3983284-3984485:-1:exon

position:3983284:-1
position: 3983284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3984485:-1
position: 3984485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3868785-3868877:-1:exon

position:3868785:-1
position: 3868785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3868877:-1
position: 3868877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3822226-3822348:-1:exon

position:3822226:-1
position: 3822226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3822348:-1
position: 3822348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3772434-3772734:-1:exon

position:3772434:-1
position: 3772434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3772734:-1
position: 3772734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3770166-3770407:-1:exon

position:3770166:-1
position: 3770166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3770407:-1
position: 3770407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3768528-3768715:-1:exon

position:3768528:-1
position: 3768528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3768715:-1
position: 3768715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3766557-3767845:-1:exon

position:3766557:-1
position: 3766557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3767845:-1
position: 3767845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3763680-3765420:-1:exon

position:3763680:-1
position: 3763680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3765420:-1
position: 3765420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3760633-3760810:-1:exon

position:3760633:-1
position: 3760633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3760810:-1
position: 3760810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3758753-3758976:-1:exon

position:3758753:-1
position: 3758753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3758976:-1
position: 3758976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3756927-3757122:-1:exon

position:3756927:-1
position: 3756927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3757122:-1
position: 3757122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3753631-3753810:-1:exon

position:3753631:-1
position: 3753631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3753810:-1
position: 3753810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3751580-3751807:-1:exon

position:3751580:-1
position: 3751580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3751807:-1
position: 3751807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3749177-3749331:-1:exon

position:3749177:-1
position: 3749177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3749331:-1
position: 3749331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3748435-3748554:-1:exon

position:3748435:-1
position: 3748435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3748554:-1
position: 3748554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3747819-3747912:-1:exon

position:3747819:-1
position: 3747819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3747912:-1
position: 3747912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3744258-3744429:-1:exon

position:3744258:-1
position: 3744258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3744429:-1
position: 3744429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3742246-3743711:-1:exon

position:3742246:-1
position: 3742246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3743711:-1
position: 3743711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3741048-3741182:-1:exon

position:3741048:-1
position: 3741048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3741182:-1
position: 3741182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3733305-3739449:-1:exon

position:3739449:-1
position: 3739449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111058182
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111058182
product: DNA N6-methyl adenine demethylase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 82 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_039437428.1
SIO_010081: LOC111058182
subclass of: SO_0000673
so part of: LOC111058182
location: complement(join(3733305..3739449,3741048..3741182,3742246..3743711,3744258..3744429,3747819..3747912,3748435..3748554,3749177..3749331,3751580..3751807,3756936..3757122,3758753..3758976,3760633..3760810,3763680..3765420,3766557..3767845,3768528..3768715,3770166..3770407,3772434..3772734,3822226..3822348,3868785..3868877,3983284..3984485,4002835..4003022))
location: region:3733305-4003022:-1
so has part: feature:4002835-4003022:-1:exon
so has part: feature:3983284-3984485:-1:exon
so has part: feature:3868785-3868877:-1:exon
so has part: feature:3822226-3822348:-1:exon
so has part: feature:3772434-3772734:-1:exon
so has part: feature:3770166-3770407:-1:exon
so has part: feature:3768528-3768715:-1:exon
so has part: feature:3766557-3767845:-1:exon
so has part: feature:3763680-3765420:-1:exon
so has part: feature:3760633-3760810:-1:exon
so has part: feature:3758753-3758976:-1:exon
so has part: feature:3756936-3757122:-1:exon
so has part: feature:3751580-3751807:-1:exon
so has part: feature:3749177-3749331:-1:exon
so has part: feature:3748435-3748554:-1:exon
so has part: feature:3747819-3747912:-1:exon
so has part: feature:3744258-3744429:-1:exon
so has part: feature:3742246-3743711:-1:exon
so has part: feature:3741048-3741182:-1:exon
so has part: feature:3733305-3739449:-1:exon

position:4003022:-1
position: 4003022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4002835-4003022:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3983284-3984485:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3868785-3868877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3822226-3822348:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3772434-3772734:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3770166-3770407:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3768528-3768715:-1:exon

urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
SIO_000628: feature:3763680-3765420:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3760633-3760810:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3758753-3758976:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3756936-3757122:-1:exon

position:3756936:-1
position: 3756936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3751580-3751807:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3749177-3749331:-1:exon

urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
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urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
SIO_000628: feature:3733305-3739449:-1:exon

LOC111058182
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111058182
product: DNA N6-methyl adenine demethylase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 82 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_039437426.1
SIO_010081: LOC111058182
subclass of: SO_0000673
so part of: LOC111058182
location: complement(join(3733305..3739449,3741048..3741182,3742246..3743711,3744258..3744429,3747819..3747912,3748435..3748554,3749177..3749331,3751580..3751807,3753631..3753810,3756936..3757122,3758753..3758976,3760633..3760810,3763680..3765420,3766557..3767845,3768528..3768715,3770166..3770407,3772434..3772734,3822226..3822348,3868785..3868877,3983284..3984485,4002835..4003022))
location: region:3733305-4003022:-1
so has part: feature:4002835-4003022:-1:exon
so has part: feature:3983284-3984485:-1:exon
so has part: feature:3868785-3868877:-1:exon
so has part: feature:3822226-3822348:-1:exon
so has part: feature:3772434-3772734:-1:exon
so has part: feature:3770166-3770407:-1:exon
so has part: feature:3768528-3768715:-1:exon
so has part: feature:3766557-3767845:-1:exon
so has part: feature:3763680-3765420:-1:exon
so has part: feature:3760633-3760810:-1:exon
so has part: feature:3758753-3758976:-1:exon
so has part: feature:3756936-3757122:-1:exon
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so has part: feature:3751580-3751807:-1:exon
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so has part: feature:3748435-3748554:-1:exon
so has part: feature:3747819-3747912:-1:exon
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so has part: feature:3742246-3743711:-1:exon
so has part: feature:3741048-3741182:-1:exon
so has part: feature:3733305-3739449:-1:exon

urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
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urn:…
SIO_000300: 8
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SIO_000300: 9
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urn:…
SIO_000300: 10
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urn:…
SIO_000300: 11
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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
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urn:…
SIO_000300: 14
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urn:…
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
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urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:3733305-3739449:-1:exon

LOC111058182
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111058182
product: DNA N6-methyl adenine demethylase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 82 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_039437427.1
SIO_010081: LOC111058182
subclass of: SO_0000673
so part of: LOC111058182
location: complement(join(3733305..3739449,3741048..3741182,3742246..3743711,3744258..3744429,3747819..3747912,3748435..3748554,3749177..3749331,3751580..3751807,3756927..3757122,3758753..3758976,3760633..3760810,3763680..3765420,3766557..3767845,3768528..3768715,3770166..3770407,3772434..3772734,3822226..3822348,3868785..3868877,3983284..3984485,4002835..4003022))
location: region:3733305-4003022:-1
so has part: feature:4002835-4003022:-1:exon
so has part: feature:3983284-3984485:-1:exon
so has part: feature:3868785-3868877:-1:exon
so has part: feature:3822226-3822348:-1:exon
so has part: feature:3772434-3772734:-1:exon
so has part: feature:3770166-3770407:-1:exon
so has part: feature:3768528-3768715:-1:exon
so has part: feature:3766557-3767845:-1:exon
so has part: feature:3763680-3765420:-1:exon
so has part: feature:3760633-3760810:-1:exon
so has part: feature:3758753-3758976:-1:exon
so has part: feature:3756927-3757122:-1:exon
so has part: feature:3751580-3751807:-1:exon
so has part: feature:3749177-3749331:-1:exon
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so has part: feature:3744258-3744429:-1:exon
so has part: feature:3742246-3743711:-1:exon
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so has part: feature:3733305-3739449:-1:exon

urn:…
SIO_000300: 1
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urn:…
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urn:…
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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SIO_000300: 8
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SIO_000300: 12
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SIO_000300: 14
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urn:…
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urn:…
SIO_000300: 17
SIO_000628: feature:3744258-3744429:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3742246-3743711:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3741048-3741182:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3733305-3739449:-1:exon

LOC111058182
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111058182
product: DNA N6-methyl adenine demethylase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 82 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_039437425.1
SIO_010081: LOC111058182
subclass of: SO_0000673
so part of: LOC111058182
location: complement(join(3733305..3739449,3741048..3741182,3742246..3743711,3744258..3744429,3747819..3747912,3748435..3748554,3749177..3749331,3751580..3751807,3753631..3753810,3756927..3757122,3758753..3758976,3760633..3760810,3763680..3765420,3766557..3767845,3768528..3768715,3770166..3770407,3772434..3772734,3822226..3822348,3868785..3868877,3983284..3984485,3996944..3997316))
location: region:3733305-3997316:-1
so has part: feature:3996944-3997316:-1:exon
so has part: feature:3983284-3984485:-1:exon
so has part: feature:3868785-3868877:-1:exon
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so has part: feature:3772434-3772734:-1:exon
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so has part: feature:3763680-3765420:-1:exon
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so has part: feature:3751580-3751807:-1:exon
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so has part: feature:3742246-3743711:-1:exon
so has part: feature:3741048-3741182:-1:exon
so has part: feature:3733305-3739449:-1:exon

position:3997316:-1
position: 3997316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3996944-3997316:-1:exon

position:3996944:-1
position: 3996944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3983284-3984485:-1:exon

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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 13
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urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
SIO_000628: feature:3748435-3748554:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3747819-3747912:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3744258-3744429:-1:exon

urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
SIO_000628: feature:3741048-3741182:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3733305-3739449:-1:exon

LOC111058182
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111058182
product: DNA N6-methyl adenine demethylase, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 81 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_039437429.1
SIO_010081: LOC111058182
subclass of: SO_0000673
so part of: LOC111058182
location: complement(join(3733305..3739449,3741048..3741182,3742246..3743711,3744258..3744429,3747819..3747912,3748435..3748554,3749177..3749331,3751580..3751807,3753631..3753810,3756927..3757122,3758753..3758976,3760633..3760810,3763680..3765420,3766557..3767845,3768528..3768715,3770166..3770407,3772434..3772734,3822226..3822348,3866440..3866528))
location: region:3733305-3866528:-1
so has part: feature:3866440-3866528:-1:exon
so has part: feature:3822226-3822348:-1:exon
so has part: feature:3772434-3772734:-1:exon
so has part: feature:3770166-3770407:-1:exon
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so has part: feature:3741048-3741182:-1:exon
so has part: feature:3733305-3739449:-1:exon

position:3866528:-1
position: 3866528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3866440-3866528:-1:exon

position:3866440:-1
position: 3866440
reference: sequence
type: ReverseStrandPosition
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urn:…
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SIO_000628: feature:3822226-3822348:-1:exon

urn:…
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urn:…
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urn:…
SIO_000300: 16
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urn:…
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urn:…
SIO_000300: 18
SIO_000628: feature:3741048-3741182:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3733305-3739449:-1:exon

LOC111058182
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111058182
product: DNA N6-methyl adenine demethylase, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 81 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_039437430.1
SIO_010081: LOC111058182
subclass of: SO_0000673
so part of: LOC111058182
location: complement(join(3733305..3739449,3741048..3741182,3742246..3743711,3744258..3744429,3747819..3747912,3748435..3748554,3749177..3749331,3751580..3751807,3753631..3753810,3756927..3757122,3758753..3758976,3760633..3760810,3763680..3765420,3766557..3767845,3768528..3768715,3770166..3770407,3772434..3772734,3822226..3822348,3838152..3839080))
location: region:3733305-3839080:-1
so has part: feature:3838152-3839080:-1:exon
so has part: feature:3822226-3822348:-1:exon
so has part: feature:3772434-3772734:-1:exon
so has part: feature:3770166-3770407:-1:exon
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so has part: feature:3741048-3741182:-1:exon
so has part: feature:3733305-3739449:-1:exon

position:3839080:-1
position: 3839080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3838152-3839080:-1:exon

position:3838152:-1
position: 3838152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3822226-3822348:-1:exon

urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 16
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urn:…
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urn:…
SIO_000300: 18
SIO_000628: feature:3741048-3741182:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3733305-3739449:-1:exon

LOC111058182
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111058182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA N6-methyl adenine demethylase isoform X4
translation: MSEGGGDPPFGGGPTSYTPSSTVPDKGLPPFSSFGGPEPGGGQDTTGYDPPRLLELSGWDYYGEGLSGRLVERGDGFPLLLSHQPQYRPWETNNEKSDGFSPDKLPSFQSQFNSFPPASEGDTVSLATLAPASPTSSSSPSGLPSFHTLSAVNVNPRGYPLVPAPVQAREIPAIQQQFLDERHIHLFQSPPGQYHPTAYHPAQAPQQAALLTVVKTEPVLVATQLQPGVYHHNNLMMDTRLEAAHKPDESRLDSRKKERRKARASSLESSNESDGAGSSSVESSGQVAAVSSTAGFKSPPVTHSVNQSDPSGADPSMMDNGSDKPVKKKRKRCGECIGCQRKDNCGDCAPCRNDKSHQICKMRRCEKLTEKKHLLYLNHGDFPRAERGRGRGKGSRGGGVSRNTYRGKLSAGGTPTRGQTPPQTTVPLNGSSDPMMAGLQDHQTTPAGVMPFYGTQPSTPTGLVDGSGFATPIRAVDQHRFAPQTAAVWQTTGTADPSTLGATWTPQGPQFIQQIAPSPIDEIRYHHTQYYHQTPGPAPPAPAPVPGYQTQPQPQQTAFLTQTNGGYPPPTAATLPPQASPLTNGGATAIATPVAVNGRQNGTTDYMDASPRPDYMNGSYTHSSQDVTAPTTPNSRCSSVTQLDESQGVAVPKAVTPAANGNPGNAKPGYPLQQPPHLLQQSLHSSSGYPGHDLHTTSGGLLGEPNNRLANNNGTTSNANNNQMESQQQQIHSWSAMEQQQTNDNQNQNNWADNERRKREEKANFMDVDGGQEMFSNQQERTNINNRIKTMILNKQQQQQHGVNQFQNQQNQKQQNQPQPSPHSFQQQQSPHPMQQPSPHPMQNPSPMPQQSPHHMPQQSPHHMPQQSPHHAPQQSPHTHLPQQSPHHMTQQSPHPSPHQMPHQSPHHGSSQGQNQLQQQQNQLQQQQQNQQNQLQQQQNQLQQQQQNQQNQLQQQQNQLQQQQQNQQNQLQQQQNQMQHQQNQQNQLQQQQNQQNQLQQQQQNQLQQQQQQQNQLQQQQSQQNQLQQQQNQQSQLQQQQNQQNQLQQQQQQNQQNQLQQQQQQQQQQQNHVQSQQQNQSLHQNQHQTNHNHHMQQTNHMHQPQMSPMNGQMRRSNEGIQNNQHENNRMMQQQQQLQQQQQQQQQQLQQQHQNFINQQQQQEKLSKDQNYLQTGNFLAQGHHPRNYLSEGGGVWPWGPNHHQHHQMGSVEPETGISAMESFMRYATSMDNGNEFKANERSSKNATPVSQNNPVATGTQSQATMTTKSQGSGTSKQASPKTPPASRKHTPLPSPCASPAPGLHSPSTTMPSTSNAWQHQSTGMPHPGMPQGEHTPKTKKEKNVQDRHQQVQSHQHHHMQYNDGDKFYGKNQHQHNMGYHQQQQHPGNHQYVDNKPPIHQNMIPPYHDPHYQFKNESKVGVSGGGFSTQQQTMTTMTTTKQQQSVFNSSTTQTCFNNKATQQDEDLKPTRAALNSAAYGWQQANTSTTVTTTMSNSLTDKTLQVDLGRCSVAGVKMETNTVWSMKQEGAAWPIKQEGMCQWGGVPMKGGPQMWKMEEKWMGPKMVEKSSQSTEVPECPRVMYPRVPFGTDPRSQYLDGVVKREHPGYVFCGEGGPNNLEKMDGSWCCRKGGTEAPSAEHLKDGCCQGLQTLDEVLETGEDGKDGKAPKRETNTPDSVRSGESAVAAASVSTKEFQDHLEKLKNNVRTEVPDCNCFPPDKCPPEPGSYYTHLGAASSLPDLRQDLEARTGIKGNAVRIEKVVYTGKEGKTVPGCPLAKWVIRRASLDEKLLVIVKHRQGHSCSTAWIVVVLVAWEGVPAQDANCIYDLLCHKLNKFGLPTTRRCATNEPRTCACQGLDPETCGASFSFGCSWSMYYNGCKYARSKTVRKFRLSVRSEEQEVEERMHTLATLLSPLYRTLAPEAFKNQTQFEREASECRLGFKPGRPFSGVTACIDFCAHAHRDLHNMNNGCTVVVTLTKHRGLSKPDDEQLHVLPLYIMDESD…
SIO_010081: LOC111058182
subclass of: SO_0000673
so part of: LOC111058182
location: complement(join(3739045..3739449,3741048..3741182,3742246..3743711,3744258..3744429,3747819..3747912,3748435..3748554,3749177..3749331,3751580..3751807,3756936..3757122,3758753..3758976,3760633..3760810,3763680..3765420,3766557..3767845,3768528..3768715,3770166..3770407,3772434..3772734,3822226..3822348,3868785..3868877,3983284..3984399))
location: region:3739045-3984399:-1
so has part: feature:3983284-3984399:-1:exon
so has part: feature:3868785-3868877:-1:exon
so has part: feature:3822226-3822348:-1:exon
so has part: feature:3772434-3772734:-1:exon
so has part: feature:3770166-3770407:-1:exon
so has part: feature:3768528-3768715:-1:exon
so has part: feature:3766557-3767845:-1:exon
so has part: feature:3763680-3765420:-1:exon
so has part: feature:3760633-3760810:-1:exon
so has part: feature:3758753-3758976:-1:exon
so has part: feature:3756936-3757122:-1:exon
so has part: feature:3751580-3751807:-1:exon
so has part: feature:3749177-3749331:-1:exon
so has part: feature:3748435-3748554:-1:exon
so has part: feature:3747819-3747912:-1:exon
so has part: feature:3744258-3744429:-1:exon
so has part: feature:3742246-3743711:-1:exon
so has part: feature:3741048-3741182:-1:exon
so has part: feature:3739045-3739449:-1:exon

XP_039293362.1
type: Protein
SIO_000068: ncbiprotein

position:3739045:-1
position: 3739045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3984399:-1
position: 3984399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3983284-3984399:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3868785-3868877:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3822226-3822348:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3772434-3772734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3770166-3770407:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3768528-3768715:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3766557-3767845:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3763680-3765420:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3760633-3760810:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3758753-3758976:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3756936-3757122:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3751580-3751807:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3749177-3749331:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3748435-3748554:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3747819-3747912:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3744258-3744429:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3742246-3743711:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3741048-3741182:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3739045-3739449:-1:exon

LOC111058182
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111058182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA N6-methyl adenine demethylase isoform X2
translation: MSEGGGDPPFGGGPTSYTPSSTVPDKGLPPFSSFGGPEPGGGQDTTGYDPPRLLELSGWDYYGEGLSGRLVERGDGFPLLLSHQPQYRPWETNNEKSDGFSPDKLPSFQSQFNSFPPASEGDTVSLATLAPASPTSSSSPSGLPSFHTLSAVNVNPRGYPLVPAPVQAREIPAIQQQFLDERHIHLFQSPPGQYHPTAYHPAQAPQQAALLTVVKTEPVLVATQLQPGVYHHNNLMMDTRLEAAHKPDESRLDSRKKERRKARASSLESSNESDGAGSSSVESSGQVAAVSSTAGFKSPPVTHSVNQSDPSGADPSMMDNGSDKPVKKKRKRCGECIGCQRKDNCGDCAPCRNDKSHQICKMRRCEKLTEKKHLLYLNHGDFPRAERGRGRGKGSRGGGVSRNTYRGKLSAGGTPTRGQTPPQTTVPLNGSSDPMMAGLQDHQTTPAGVMPFYGTQPSTPTGLVDGSGFATPIRAVDQHRFAPQTAAVWQTTGTADPSTLGATWTPQGPQFIQQIAPSPIDEIRYHHTQYYHQTPGPAPPAPAPVPGYQTQPQPQQTAFLTQTNGGYPPPTAATLPPQASPLTNGGATAIATPVAVNGRQNGTTDYMDASPRPDYMNGSYTHSSQDVTAPTTPNSRCSSVTQLDESQGVAVPKAVTPAANGNPGNAKPGYPLQQPPHLLQQSLHSSSGYPGHDLHTTSGGLLGEPNNRLANNNGTTSNANNNQMESQQQQIHSWSAMEQQQTNDNQNQNNWADNERRKREEKANFMDVDGGQEMFSNQQERTNINNRIKTMILNKQQQQQHGVNQFQNQQNQKQQNQPQPSPHSFQQQQSPHPMQQPSPHPMQNPSPMPQQSPHHMPQQSPHHMPQQSPHHAPQQSPHTHLPQQSPHHMTQQSPHPSPHQMPHQSPHHGSSQGQNQLQQQQNQLQQQQQNQQNQLQQQQNQLQQQQQNQQNQLQQQQNQLQQQQQNQQNQLQQQQNQMQHQQNQQNQLQQQQNQQNQLQQQQQNQLQQQQQQQNQLQQQQSQQNQLQQQQNQQSQLQQQQNQQNQLQQQQQQNQQNQLQQQQQQQQQQQNHVQSQQQNQSLHQNQHQTNHNHHMQQTNHMHQPQMSPMNGQMRRSNEGIQNNQHENNRMMQQQQQLQQQQQQQQQQLQQQHQNFINQQQQQEKLSKDQNYLQTGNFLAQGHHPRNYLSEGGGVWPWGPNHHQHHQMGSVEPETGISAMESFMRYATSMDNGNEFKANERSSKNATPVSQNNPVATGTQSQATMTTKSQGSGTSKQASPKTPPASRKHTPLPSPCASPAPGLHSPSTTMPSTSNAWQHQSTGMPHPGMPQGEHTPKTKKEKNVQDRHQQVQSHQHHHMQYNDGDKFYGKNQHQHNMGYHQQQQHPGNHQYVDNKPPIHQNMIPPYHDPHYQFKNESKVGVSGGGFSTQQQTMTTMTTTKQQQSVFNSSTTQTCFNNKATQQDEDLKPTRAALNSAAYGWQQANTSTTVTTTMSNSLTDKTLQVDLGRCSVAGVKMETNTVWSMKQEGAAWPIKQEGMCQWGGVPMKGGPQMWKMEEKWMGPKMVEKSSQSTEVPECPRVMYPRVPFGTDPRSQYLDGVVKREHPGYVFCGEGGPNNLEKMDGSWCCRKGGTEAPSAEHLKDGCCQGLQTLDEVLETGEDGKDGKAPKRETNTPDSVRSGESAVAAASVSTKEFQDHLEKLKNNVRTEVPDCNCFPPDKCPPEPGSYYTHLGAASSLPDLRQDLEARTGIKGNAVRIEKVVYTGKEGKTVPGCPLAKWVIRRASLDEKLLVIVKHRQGHSCSTAWIVVVLVAWEGVPAQDANCIYDLLCHKLNKFGLPTTRRCATNEPRTCACQGLDPETCGASFSFGCSWSMYYNGCKYARSKTVRKFRLSVRSEAVLDNFLPKTVSQRKLRKIEKTAKTNKQKANEQPKKTTNTGQLQETTTDKHVNKKELIEAEQEVEERMHTLATLLSPLYRTLAPEAFKNQTQFEREASECRLGFKP…
SIO_010081: LOC111058182
subclass of: SO_0000673
so part of: LOC111058182
location: complement(join(3739045..3739449,3741048..3741182,3742246..3743711,3744258..3744429,3747819..3747912,3748435..3748554,3749177..3749331,3751580..3751807,3753631..3753810,3756936..3757122,3758753..3758976,3760633..3760810,3763680..3765420,3766557..3767845,3768528..3768715,3770166..3770407,3772434..3772734,3822226..3822348,3868785..3868877,3983284..3984399))
location: region:3739045-3984399:-1
so has part: feature:3983284-3984399:-1:exon
so has part: feature:3868785-3868877:-1:exon
so has part: feature:3822226-3822348:-1:exon
so has part: feature:3772434-3772734:-1:exon
so has part: feature:3770166-3770407:-1:exon
so has part: feature:3768528-3768715:-1:exon
so has part: feature:3766557-3767845:-1:exon
so has part: feature:3763680-3765420:-1:exon
so has part: feature:3760633-3760810:-1:exon
so has part: feature:3758753-3758976:-1:exon
so has part: feature:3756936-3757122:-1:exon
so has part: feature:3753631-3753810:-1:exon
so has part: feature:3751580-3751807:-1:exon
so has part: feature:3749177-3749331:-1:exon
so has part: feature:3748435-3748554:-1:exon
so has part: feature:3747819-3747912:-1:exon
so has part: feature:3744258-3744429:-1:exon
so has part: feature:3742246-3743711:-1:exon
so has part: feature:3741048-3741182:-1:exon
so has part: feature:3739045-3739449:-1:exon

XP_039293360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3983284-3984399:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3868785-3868877:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3822226-3822348:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3772434-3772734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3770166-3770407:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3768528-3768715:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3766557-3767845:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3763680-3765420:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3760633-3760810:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3758753-3758976:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3756936-3757122:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3753631-3753810:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3751580-3751807:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3749177-3749331:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3748435-3748554:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3747819-3747912:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3744258-3744429:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3742246-3743711:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3741048-3741182:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3739045-3739449:-1:exon

LOC111058182
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111058182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA N6-methyl adenine demethylase isoform X3
translation: MSEGGGDPPFGGGPTSYTPSSTVPDKGLPPFSSFGGPEPGGGQDTTGYDPPRLLELSGWDYYGEGLSGRLVERGDGFPLLLSHQPQYRPWETNNEKSDGFSPDKLPSFQSQFNSFPPASEGDTVSLATLAPASPTSSSSPSGLPSFHTLSAVNVNPRGYPLVPAPVQAREIPAIQQQFLDERHIHLFQSPPGQYHPTAYHPAQAPQQAALLTVVKTEPVLVATQLQPGVYHHNNLMMDTRLEAAHKPDESRLDSRKKERRKARASSLESSNESDGAGSSSVESSGQVAAVSSTAGFKSPPVTHSVNQSDPSGADPSMMDNGSDKPVKKKRKRCGECIGCQRKDNCGDCAPCRNDKSHQICKMRRCEKLTEKKHLLYLNHGDFPRAERGRGRGKGSRGGGVSRNTYRGKLSAGGTPTRGQTPPQTTVPLNGSSDPMMAGLQDHQTTPAGVMPFYGTQPSTPTGLVDGSGFATPIRAVDQHRFAPQTAAVWQTTGTADPSTLGATWTPQGPQFIQQIAPSPIDEIRYHHTQYYHQTPGPAPPAPAPVPGYQTQPQPQQTAFLTQTNGGYPPPTAATLPPQASPLTNGGATAIATPVAVNGRQNGTTDYMDASPRPDYMNGSYTHSSQDVTAPTTPNSRCSSVTQLDESQGVAVPKAVTPAANGNPGNAKPGYPLQQPPHLLQQSLHSSSGYPGHDLHTTSGGLLGEPNNRLANNNGTTSNANNNQMESQQQQIHSWSAMEQQQTNDNQNQNNWADNERRKREEKANFMDVDGGQEMFSNQQERTNINNRIKTMILNKQQQQQHGVNQFQNQQNQKQQNQPQPSPHSFQQQQSPHPMQQPSPHPMQNPSPMPQQSPHHMPQQSPHHMPQQSPHHAPQQSPHTHLPQQSPHHMTQQSPHPSPHQMPHQSPHHGSSQGQNQLQQQQNQLQQQQQNQQNQLQQQQNQLQQQQQNQQNQLQQQQNQLQQQQQNQQNQLQQQQNQMQHQQNQQNQLQQQQNQQNQLQQQQQNQLQQQQQQQNQLQQQQSQQNQLQQQQNQQSQLQQQQNQQNQLQQQQQQNQQNQLQQQQQQQQQQQNHVQSQQQNQSLHQNQHQTNHNHHMQQTNHMHQPQMSPMNGQMRRSNEGIQNNQHENNRMMQQQQQLQQQQQQQQQQLQQQHQNFINQQQQQEKLSKDQNYLQTGNFLAQGHHPRNYLSEGGGVWPWGPNHHQHHQMGSVEPETGISAMESFMRYATSMDNGNEFKANERSSKNATPVSQNNPVATGTQSQATMTTKSQGSGTSKQASPKTPPASRKHTPLPSPCASPAPGLHSPSTTMPSTSNAWQHQSTGMPHPGMPQGEHTPKTKKEKNVQDRHQQVQSHQHHHMQYNDGDKFYGKNQHQHNMGYHQQQQHPGNHQYVDNKPPIHQNMIPPYHDPHYQFKNESKVGVSGGGFSTQQQTMTTMTTTKQQQSVFNSSTTQTCFNNKATQQDEDLKPTRAALNSAAYGWQQANTSTTVTTTMSNSLTDKTLQVDLGRCSVAGVKMETNTVWSMKQEGAAWPIKQEGMCQWGGVPMKGGPQMWKMEEKWMGPKMVEKSSQSTEVPECPRVMYPRVPFGTDPRSQYLDGVVKREHPGYVFCGEGGPNNLEKMDGSWCCRKGGTEAPSAEHLKDGCCQGLQTLDEVLETGEDGKDGKAPKRETNTPDSVRSGESAVAAASVSTKEFQDHLEKLKNNVRTEVPDCNCFPPDKCPPEPGSYYTHLGAASSLPDLRQDLEARTGIKGNAVRIEKVVYTGKEGKTVPGCPLAKWVIRRASLDEKLLVIVKHRQGHSCSTAWIVVVLVAWEGVPAQDANCIYDLLCHKLNKFGLPTTRRCATNEPRTCACQGLDPETCGASFSFGCSWSMYYNGCKYARSKTVRKFRLSVRSEVSDEQEVEERMHTLATLLSPLYRTLAPEAFKNQTQFEREASECRLGFKPGRPFSGVTACIDFCAHAHRDLHNMNNGCTVVVTLTKHRGLSKPDDEQLHVLPLYIMD…
SIO_010081: LOC111058182
subclass of: SO_0000673
so part of: LOC111058182
location: complement(join(3739045..3739449,3741048..3741182,3742246..3743711,3744258..3744429,3747819..3747912,3748435..3748554,3749177..3749331,3751580..3751807,3756927..3757122,3758753..3758976,3760633..3760810,3763680..3765420,3766557..3767845,3768528..3768715,3770166..3770407,3772434..3772734,3822226..3822348,3868785..3868877,3983284..3984399))
location: region:3739045-3984399:-1
so has part: feature:3983284-3984399:-1:exon
so has part: feature:3868785-3868877:-1:exon
so has part: feature:3822226-3822348:-1:exon
so has part: feature:3772434-3772734:-1:exon
so has part: feature:3770166-3770407:-1:exon
so has part: feature:3768528-3768715:-1:exon
so has part: feature:3766557-3767845:-1:exon
so has part: feature:3763680-3765420:-1:exon
so has part: feature:3760633-3760810:-1:exon
so has part: feature:3758753-3758976:-1:exon
so has part: feature:3756927-3757122:-1:exon
so has part: feature:3751580-3751807:-1:exon
so has part: feature:3749177-3749331:-1:exon
so has part: feature:3748435-3748554:-1:exon
so has part: feature:3747819-3747912:-1:exon
so has part: feature:3744258-3744429:-1:exon
so has part: feature:3742246-3743711:-1:exon
so has part: feature:3741048-3741182:-1:exon
so has part: feature:3739045-3739449:-1:exon

XP_039293361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3983284-3984399:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3868785-3868877:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3822226-3822348:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3772434-3772734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3770166-3770407:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3768528-3768715:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3766557-3767845:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3763680-3765420:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3760633-3760810:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3758753-3758976:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3756927-3757122:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3751580-3751807:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3749177-3749331:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3748435-3748554:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3747819-3747912:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3744258-3744429:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3742246-3743711:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3741048-3741182:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3739045-3739449:-1:exon

LOC111058182
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111058182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA N6-methyl adenine demethylase isoform X1
translation: MSEGGGDPPFGGGPTSYTPSSTVPDKGLPPFSSFGGPEPGGGQDTTGYDPPRLLELSGWDYYGEGLSGRLVERGDGFPLLLSHQPQYRPWETNNEKSDGFSPDKLPSFQSQFNSFPPASEGDTVSLATLAPASPTSSSSPSGLPSFHTLSAVNVNPRGYPLVPAPVQAREIPAIQQQFLDERHIHLFQSPPGQYHPTAYHPAQAPQQAALLTVVKTEPVLVATQLQPGVYHHNNLMMDTRLEAAHKPDESRLDSRKKERRKARASSLESSNESDGAGSSSVESSGQVAAVSSTAGFKSPPVTHSVNQSDPSGADPSMMDNGSDKPVKKKRKRCGECIGCQRKDNCGDCAPCRNDKSHQICKMRRCEKLTEKKHLLYLNHGDFPRAERGRGRGKGSRGGGVSRNTYRGKLSAGGTPTRGQTPPQTTVPLNGSSDPMMAGLQDHQTTPAGVMPFYGTQPSTPTGLVDGSGFATPIRAVDQHRFAPQTAAVWQTTGTADPSTLGATWTPQGPQFIQQIAPSPIDEIRYHHTQYYHQTPGPAPPAPAPVPGYQTQPQPQQTAFLTQTNGGYPPPTAATLPPQASPLTNGGATAIATPVAVNGRQNGTTDYMDASPRPDYMNGSYTHSSQDVTAPTTPNSRCSSVTQLDESQGVAVPKAVTPAANGNPGNAKPGYPLQQPPHLLQQSLHSSSGYPGHDLHTTSGGLLGEPNNRLANNNGTTSNANNNQMESQQQQIHSWSAMEQQQTNDNQNQNNWADNERRKREEKANFMDVDGGQEMFSNQQERTNINNRIKTMILNKQQQQQHGVNQFQNQQNQKQQNQPQPSPHSFQQQQSPHPMQQPSPHPMQNPSPMPQQSPHHMPQQSPHHMPQQSPHHAPQQSPHTHLPQQSPHHMTQQSPHPSPHQMPHQSPHHGSSQGQNQLQQQQNQLQQQQQNQQNQLQQQQNQLQQQQQNQQNQLQQQQNQLQQQQQNQQNQLQQQQNQMQHQQNQQNQLQQQQNQQNQLQQQQQNQLQQQQQQQNQLQQQQSQQNQLQQQQNQQSQLQQQQNQQNQLQQQQQQNQQNQLQQQQQQQQQQQNHVQSQQQNQSLHQNQHQTNHNHHMQQTNHMHQPQMSPMNGQMRRSNEGIQNNQHENNRMMQQQQQLQQQQQQQQQQLQQQHQNFINQQQQQEKLSKDQNYLQTGNFLAQGHHPRNYLSEGGGVWPWGPNHHQHHQMGSVEPETGISAMESFMRYATSMDNGNEFKANERSSKNATPVSQNNPVATGTQSQATMTTKSQGSGTSKQASPKTPPASRKHTPLPSPCASPAPGLHSPSTTMPSTSNAWQHQSTGMPHPGMPQGEHTPKTKKEKNVQDRHQQVQSHQHHHMQYNDGDKFYGKNQHQHNMGYHQQQQHPGNHQYVDNKPPIHQNMIPPYHDPHYQFKNESKVGVSGGGFSTQQQTMTTMTTTKQQQSVFNSSTTQTCFNNKATQQDEDLKPTRAALNSAAYGWQQANTSTTVTTTMSNSLTDKTLQVDLGRCSVAGVKMETNTVWSMKQEGAAWPIKQEGMCQWGGVPMKGGPQMWKMEEKWMGPKMVEKSSQSTEVPECPRVMYPRVPFGTDPRSQYLDGVVKREHPGYVFCGEGGPNNLEKMDGSWCCRKGGTEAPSAEHLKDGCCQGLQTLDEVLETGEDGKDGKAPKRETNTPDSVRSGESAVAAASVSTKEFQDHLEKLKNNVRTEVPDCNCFPPDKCPPEPGSYYTHLGAASSLPDLRQDLEARTGIKGNAVRIEKVVYTGKEGKTVPGCPLAKWVIRRASLDEKLLVIVKHRQGHSCSTAWIVVVLVAWEGVPAQDANCIYDLLCHKLNKFGLPTTRRCATNEPRTCACQGLDPETCGASFSFGCSWSMYYNGCKYARSKTVRKFRLSVRSEVSDAVLDNFLPKTVSQRKLRKIEKTAKTNKQKANEQPKKTTNTGQLQETTTDKHVNKKELIEAEQEVEERMHTLATLLSPLYRTLAPEAFKNQTQFEREASECRLG…
SIO_010081: LOC111058182
subclass of: SO_0000673
so part of: LOC111058182
location: complement(join(3739045..3739449,3741048..3741182,3742246..3743711,3744258..3744429,3747819..3747912,3748435..3748554,3749177..3749331,3751580..3751807,3753631..3753810,3756927..3757122,3758753..3758976,3760633..3760810,3763680..3765420,3766557..3767845,3768528..3768715,3770166..3770407,3772434..3772734,3822226..3822348,3868785..3868877,3983284..3984399))
location: region:3739045-3984399:-1
so has part: feature:3983284-3984399:-1:exon
so has part: feature:3868785-3868877:-1:exon
so has part: feature:3822226-3822348:-1:exon
so has part: feature:3772434-3772734:-1:exon
so has part: feature:3770166-3770407:-1:exon
so has part: feature:3768528-3768715:-1:exon
so has part: feature:3766557-3767845:-1:exon
so has part: feature:3763680-3765420:-1:exon
so has part: feature:3760633-3760810:-1:exon
so has part: feature:3758753-3758976:-1:exon
so has part: feature:3756927-3757122:-1:exon
so has part: feature:3753631-3753810:-1:exon
so has part: feature:3751580-3751807:-1:exon
so has part: feature:3749177-3749331:-1:exon
so has part: feature:3748435-3748554:-1:exon
so has part: feature:3747819-3747912:-1:exon
so has part: feature:3744258-3744429:-1:exon
so has part: feature:3742246-3743711:-1:exon
so has part: feature:3741048-3741182:-1:exon
so has part: feature:3739045-3739449:-1:exon

XP_039293358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3983284-3984399:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3868785-3868877:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3822226-3822348:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3772434-3772734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3770166-3770407:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3768528-3768715:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3766557-3767845:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3763680-3765420:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3760633-3760810:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3758753-3758976:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3756927-3757122:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3753631-3753810:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3751580-3751807:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3749177-3749331:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3748435-3748554:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3747819-3747912:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3744258-3744429:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3742246-3743711:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3741048-3741182:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3739045-3739449:-1:exon

LOC111058182
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111058182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA N6-methyl adenine demethylase isoform X1
translation: MSEGGGDPPFGGGPTSYTPSSTVPDKGLPPFSSFGGPEPGGGQDTTGYDPPRLLELSGWDYYGEGLSGRLVERGDGFPLLLSHQPQYRPWETNNEKSDGFSPDKLPSFQSQFNSFPPASEGDTVSLATLAPASPTSSSSPSGLPSFHTLSAVNVNPRGYPLVPAPVQAREIPAIQQQFLDERHIHLFQSPPGQYHPTAYHPAQAPQQAALLTVVKTEPVLVATQLQPGVYHHNNLMMDTRLEAAHKPDESRLDSRKKERRKARASSLESSNESDGAGSSSVESSGQVAAVSSTAGFKSPPVTHSVNQSDPSGADPSMMDNGSDKPVKKKRKRCGECIGCQRKDNCGDCAPCRNDKSHQICKMRRCEKLTEKKHLLYLNHGDFPRAERGRGRGKGSRGGGVSRNTYRGKLSAGGTPTRGQTPPQTTVPLNGSSDPMMAGLQDHQTTPAGVMPFYGTQPSTPTGLVDGSGFATPIRAVDQHRFAPQTAAVWQTTGTADPSTLGATWTPQGPQFIQQIAPSPIDEIRYHHTQYYHQTPGPAPPAPAPVPGYQTQPQPQQTAFLTQTNGGYPPPTAATLPPQASPLTNGGATAIATPVAVNGRQNGTTDYMDASPRPDYMNGSYTHSSQDVTAPTTPNSRCSSVTQLDESQGVAVPKAVTPAANGNPGNAKPGYPLQQPPHLLQQSLHSSSGYPGHDLHTTSGGLLGEPNNRLANNNGTTSNANNNQMESQQQQIHSWSAMEQQQTNDNQNQNNWADNERRKREEKANFMDVDGGQEMFSNQQERTNINNRIKTMILNKQQQQQHGVNQFQNQQNQKQQNQPQPSPHSFQQQQSPHPMQQPSPHPMQNPSPMPQQSPHHMPQQSPHHMPQQSPHHAPQQSPHTHLPQQSPHHMTQQSPHPSPHQMPHQSPHHGSSQGQNQLQQQQNQLQQQQQNQQNQLQQQQNQLQQQQQNQQNQLQQQQNQLQQQQQNQQNQLQQQQNQMQHQQNQQNQLQQQQNQQNQLQQQQQNQLQQQQQQQNQLQQQQSQQNQLQQQQNQQSQLQQQQNQQNQLQQQQQQNQQNQLQQQQQQQQQQQNHVQSQQQNQSLHQNQHQTNHNHHMQQTNHMHQPQMSPMNGQMRRSNEGIQNNQHENNRMMQQQQQLQQQQQQQQQQLQQQHQNFINQQQQQEKLSKDQNYLQTGNFLAQGHHPRNYLSEGGGVWPWGPNHHQHHQMGSVEPETGISAMESFMRYATSMDNGNEFKANERSSKNATPVSQNNPVATGTQSQATMTTKSQGSGTSKQASPKTPPASRKHTPLPSPCASPAPGLHSPSTTMPSTSNAWQHQSTGMPHPGMPQGEHTPKTKKEKNVQDRHQQVQSHQHHHMQYNDGDKFYGKNQHQHNMGYHQQQQHPGNHQYVDNKPPIHQNMIPPYHDPHYQFKNESKVGVSGGGFSTQQQTMTTMTTTKQQQSVFNSSTTQTCFNNKATQQDEDLKPTRAALNSAAYGWQQANTSTTVTTTMSNSLTDKTLQVDLGRCSVAGVKMETNTVWSMKQEGAAWPIKQEGMCQWGGVPMKGGPQMWKMEEKWMGPKMVEKSSQSTEVPECPRVMYPRVPFGTDPRSQYLDGVVKREHPGYVFCGEGGPNNLEKMDGSWCCRKGGTEAPSAEHLKDGCCQGLQTLDEVLETGEDGKDGKAPKRETNTPDSVRSGESAVAAASVSTKEFQDHLEKLKNNVRTEVPDCNCFPPDKCPPEPGSYYTHLGAASSLPDLRQDLEARTGIKGNAVRIEKVVYTGKEGKTVPGCPLAKWVIRRASLDEKLLVIVKHRQGHSCSTAWIVVVLVAWEGVPAQDANCIYDLLCHKLNKFGLPTTRRCATNEPRTCACQGLDPETCGASFSFGCSWSMYYNGCKYARSKTVRKFRLSVRSEVSDAVLDNFLPKTVSQRKLRKIEKTAKTNKQKANEQPKKTTNTGQLQETTTDKHVNKKELIEAEQEVEERMHTLATLLSPLYRTLAPEAFKNQTQFEREASECRLG…
SIO_010081: LOC111058182
subclass of: SO_0000673
so part of: LOC111058182
location: complement(join(3739045..3739449,3741048..3741182,3742246..3743711,3744258..3744429,3747819..3747912,3748435..3748554,3749177..3749331,3751580..3751807,3753631..3753810,3756927..3757122,3758753..3758976,3760633..3760810,3763680..3765420,3766557..3767845,3768528..3768715,3770166..3770407,3772434..3772734,3822226..3822348,3868785..3868877,3983284..3984399))
location: region:3739045-3984399:-1
so has part: feature:3983284-3984399:-1:exon
so has part: feature:3868785-3868877:-1:exon
so has part: feature:3822226-3822348:-1:exon
so has part: feature:3772434-3772734:-1:exon
so has part: feature:3770166-3770407:-1:exon
so has part: feature:3768528-3768715:-1:exon
so has part: feature:3766557-3767845:-1:exon
so has part: feature:3763680-3765420:-1:exon
so has part: feature:3760633-3760810:-1:exon
so has part: feature:3758753-3758976:-1:exon
so has part: feature:3756927-3757122:-1:exon
so has part: feature:3753631-3753810:-1:exon
so has part: feature:3751580-3751807:-1:exon
so has part: feature:3749177-3749331:-1:exon
so has part: feature:3748435-3748554:-1:exon
so has part: feature:3747819-3747912:-1:exon
so has part: feature:3744258-3744429:-1:exon
so has part: feature:3742246-3743711:-1:exon
so has part: feature:3741048-3741182:-1:exon
so has part: feature:3739045-3739449:-1:exon

XP_039293359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3983284-3984399:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3868785-3868877:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3822226-3822348:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3772434-3772734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3770166-3770407:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3768528-3768715:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3766557-3767845:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3763680-3765420:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3760633-3760810:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3758753-3758976:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3756927-3757122:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3753631-3753810:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3751580-3751807:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3749177-3749331:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3748435-3748554:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3747819-3747912:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3744258-3744429:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3742246-3743711:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3741048-3741182:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3739045-3739449:-1:exon

LOC111058182
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111058182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111058182 isoform X5
translation: MMAGLQDHQTTPAGVMPFYGTQPSTPTGLVDGSGFATPIRAVDQHRFAPQTAAVWQTTGTADPSTLGATWTPQGPQFIQQIAPSPIDEIRYHHTQYYHQTPGPAPPAPAPVPGYQTQPQPQQTAFLTQTNGGYPPPTAATLPPQASPLTNGGATAIATPVAVNGRQNGTTDYMDASPRPDYMNGSYTHSSQDVTAPTTPNSRCSSVTQLDESQGVAVPKAVTPAANGNPGNAKPGYPLQQPPHLLQQSLHSSSGYPGHDLHTTSGGLLGEPNNRLANNNGTTSNANNNQMESQQQQIHSWSAMEQQQTNDNQNQNNWADNERRKREEKANFMDVDGGQEMFSNQQERTNINNRIKTMILNKQQQQQHGVNQFQNQQNQKQQNQPQPSPHSFQQQQSPHPMQQPSPHPMQNPSPMPQQSPHHMPQQSPHHMPQQSPHHAPQQSPHTHLPQQSPHHMTQQSPHPSPHQMPHQSPHHGSSQGQNQLQQQQNQLQQQQQNQQNQLQQQQNQLQQQQQNQQNQLQQQQNQLQQQQQNQQNQLQQQQNQMQHQQNQQNQLQQQQNQQNQLQQQQQNQLQQQQQQQNQLQQQQSQQNQLQQQQNQQSQLQQQQNQQNQLQQQQQQNQQNQLQQQQQQQQQQQNHVQSQQQNQSLHQNQHQTNHNHHMQQTNHMHQPQMSPMNGQMRRSNEGIQNNQHENNRMMQQQQQLQQQQQQQQQQLQQQHQNFINQQQQQEKLSKDQNYLQTGNFLAQGHHPRNYLSEGGGVWPWGPNHHQHHQMGSVEPETGISAMESFMRYATSMDNGNEFKANERSSKNATPVSQNNPVATGTQSQATMTTKSQGSGTSKQASPKTPPASRKHTPLPSPCASPAPGLHSPSTTMPSTSNAWQHQSTGMPHPGMPQGEHTPKTKKEKNVQDRHQQVQSHQHHHMQYNDGDKFYGKNQHQHNMGYHQQQQHPGNHQYVDNKPPIHQNMIPPYHDPHYQFKNESKVGVSGGGFSTQQQTMTTMTTTKQQQSVFNSSTTQTCFNNKATQQDEDLKPTRAALNSAAYGWQQANTSTTVTTTMSNSLTDKTLQVDLGRCSVAGVKMETNTVWSMKQEGAAWPIKQEGMCQWGGVPMKGGPQMWKMEEKWMGPKMVEKSSQSTEVPECPRVMYPRVPFGTDPRSQYLDGVVKREHPGYVFCGEGGPNNLEKMDGSWCCRKGGTEAPSAEHLKDGCCQGLQTLDEVLETGEDGKDGKAPKRETNTPDSVRSGESAVAAASVSTKEFQDHLEKLKNNVRTEVPDCNCFPPDKCPPEPGSYYTHLGAASSLPDLRQDLEARTGIKGNAVRIEKVVYTGKEGKTVPGCPLAKWVIRRASLDEKLLVIVKHRQGHSCSTAWIVVVLVAWEGVPAQDANCIYDLLCHKLNKFGLPTTRRCATNEPRTCACQGLDPETCGASFSFGCSWSMYYNGCKYARSKTVRKFRLSVRSEVSDAVLDNFLPKTVSQRKLRKIEKTAKTNKQKANEQPKKTTNTGQLQETTTDKHVNKKELIEAEQEVEERMHTLATLLSPLYRTLAPEAFKNQTQFEREASECRLGFKPGRPFSGVTACIDFCAHAHRDLHNMNNGCTVVVTLTKHRGLSKPDDEQLHVLPLYIMDESDEFGNKEAQESKVRTGAIENLTKFPCEVKVRSVPLQPCRRHGKKRKEDEADTVVGKTDSKAHKTSGTDVNQRGDAHSMNANLMEGADPQLQSSQVSSTVLDSPVSMYQPWNYGGGGEMAWANAGGQPPHPGWRPPNCDRPPNWPPNMPHNPEGWNPDYPHQLGPYSNMAGMRSGIDKVVPDSTTNTSNNVPPTSVSSTTLASADQQKLQSADQQKFQSADQQQKFQAARGQSSQWPVGSPNGQQSQSGSQGQGSQGSQTPSWNSGGGEIGGGQGQEVKGKGSEDMGAMIQSPHPPQSPFSSPAMSPQNMPPHSPVHNFPHHSRSQPPTSPYHPDWASNPDQQSEGSWDFNSPGTPGPSPFRVPKGRPLSRSS…
SIO_010081: LOC111058182
subclass of: SO_0000673
so part of: LOC111058182
location: complement(join(3739045..3739449,3741048..3741182,3742246..3743711,3744258..3744429,3747819..3747912,3748435..3748554,3749177..3749331,3751580..3751807,3753631..3753810,3756927..3757122,3758753..3758976,3760633..3760810,3763680..3765420,3766557..3767845,3768528..3768715,3770166..3770407,3772434..3772734,3822226..3822255))
location: region:3739045-3822255:-1
so has part: feature:3822226-3822255:-1:exon
so has part: feature:3772434-3772734:-1:exon
so has part: feature:3770166-3770407:-1:exon
so has part: feature:3768528-3768715:-1:exon
so has part: feature:3766557-3767845:-1:exon
so has part: feature:3763680-3765420:-1:exon
so has part: feature:3760633-3760810:-1:exon
so has part: feature:3758753-3758976:-1:exon
so has part: feature:3756927-3757122:-1:exon
so has part: feature:3753631-3753810:-1:exon
so has part: feature:3751580-3751807:-1:exon
so has part: feature:3749177-3749331:-1:exon
so has part: feature:3748435-3748554:-1:exon
so has part: feature:3747819-3747912:-1:exon
so has part: feature:3744258-3744429:-1:exon
so has part: feature:3742246-3743711:-1:exon
so has part: feature:3741048-3741182:-1:exon
so has part: feature:3739045-3739449:-1:exon

XP_039293363.1
type: Protein
SIO_000068: ncbiprotein

position:3822255:-1
position: 3822255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3822226-3822255:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3772434-3772734:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3770166-3770407:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3768528-3768715:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3766557-3767845:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3763680-3765420:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3760633-3760810:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3758753-3758976:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3756927-3757122:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3753631-3753810:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3751580-3751807:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3749177-3749331:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3748435-3748554:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3747819-3747912:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3744258-3744429:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3742246-3743711:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3741048-3741182:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3739045-3739449:-1:exon

LOC111058182
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111058182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111058182 isoform X5
translation: MMAGLQDHQTTPAGVMPFYGTQPSTPTGLVDGSGFATPIRAVDQHRFAPQTAAVWQTTGTADPSTLGATWTPQGPQFIQQIAPSPIDEIRYHHTQYYHQTPGPAPPAPAPVPGYQTQPQPQQTAFLTQTNGGYPPPTAATLPPQASPLTNGGATAIATPVAVNGRQNGTTDYMDASPRPDYMNGSYTHSSQDVTAPTTPNSRCSSVTQLDESQGVAVPKAVTPAANGNPGNAKPGYPLQQPPHLLQQSLHSSSGYPGHDLHTTSGGLLGEPNNRLANNNGTTSNANNNQMESQQQQIHSWSAMEQQQTNDNQNQNNWADNERRKREEKANFMDVDGGQEMFSNQQERTNINNRIKTMILNKQQQQQHGVNQFQNQQNQKQQNQPQPSPHSFQQQQSPHPMQQPSPHPMQNPSPMPQQSPHHMPQQSPHHMPQQSPHHAPQQSPHTHLPQQSPHHMTQQSPHPSPHQMPHQSPHHGSSQGQNQLQQQQNQLQQQQQNQQNQLQQQQNQLQQQQQNQQNQLQQQQNQLQQQQQNQQNQLQQQQNQMQHQQNQQNQLQQQQNQQNQLQQQQQNQLQQQQQQQNQLQQQQSQQNQLQQQQNQQSQLQQQQNQQNQLQQQQQQNQQNQLQQQQQQQQQQQNHVQSQQQNQSLHQNQHQTNHNHHMQQTNHMHQPQMSPMNGQMRRSNEGIQNNQHENNRMMQQQQQLQQQQQQQQQQLQQQHQNFINQQQQQEKLSKDQNYLQTGNFLAQGHHPRNYLSEGGGVWPWGPNHHQHHQMGSVEPETGISAMESFMRYATSMDNGNEFKANERSSKNATPVSQNNPVATGTQSQATMTTKSQGSGTSKQASPKTPPASRKHTPLPSPCASPAPGLHSPSTTMPSTSNAWQHQSTGMPHPGMPQGEHTPKTKKEKNVQDRHQQVQSHQHHHMQYNDGDKFYGKNQHQHNMGYHQQQQHPGNHQYVDNKPPIHQNMIPPYHDPHYQFKNESKVGVSGGGFSTQQQTMTTMTTTKQQQSVFNSSTTQTCFNNKATQQDEDLKPTRAALNSAAYGWQQANTSTTVTTTMSNSLTDKTLQVDLGRCSVAGVKMETNTVWSMKQEGAAWPIKQEGMCQWGGVPMKGGPQMWKMEEKWMGPKMVEKSSQSTEVPECPRVMYPRVPFGTDPRSQYLDGVVKREHPGYVFCGEGGPNNLEKMDGSWCCRKGGTEAPSAEHLKDGCCQGLQTLDEVLETGEDGKDGKAPKRETNTPDSVRSGESAVAAASVSTKEFQDHLEKLKNNVRTEVPDCNCFPPDKCPPEPGSYYTHLGAASSLPDLRQDLEARTGIKGNAVRIEKVVYTGKEGKTVPGCPLAKWVIRRASLDEKLLVIVKHRQGHSCSTAWIVVVLVAWEGVPAQDANCIYDLLCHKLNKFGLPTTRRCATNEPRTCACQGLDPETCGASFSFGCSWSMYYNGCKYARSKTVRKFRLSVRSEVSDAVLDNFLPKTVSQRKLRKIEKTAKTNKQKANEQPKKTTNTGQLQETTTDKHVNKKELIEAEQEVEERMHTLATLLSPLYRTLAPEAFKNQTQFEREASECRLGFKPGRPFSGVTACIDFCAHAHRDLHNMNNGCTVVVTLTKHRGLSKPDDEQLHVLPLYIMDESDEFGNKEAQESKVRTGAIENLTKFPCEVKVRSVPLQPCRRHGKKRKEDEADTVVGKTDSKAHKTSGTDVNQRGDAHSMNANLMEGADPQLQSSQVSSTVLDSPVSMYQPWNYGGGGEMAWANAGGQPPHPGWRPPNCDRPPNWPPNMPHNPEGWNPDYPHQLGPYSNMAGMRSGIDKVVPDSTTNTSNNVPPTSVSSTTLASADQQKLQSADQQKFQSADQQQKFQAARGQSSQWPVGSPNGQQSQSGSQGQGSQGSQTPSWNSGGGEIGGGQGQEVKGKGSEDMGAMIQSPHPPQSPFSSPAMSPQNMPPHSPVHNFPHHSRSQPPTSPYHPDWASNPDQQSEGSWDFNSPGTPGPSPFRVPKGRPLSRSS…
SIO_010081: LOC111058182
subclass of: SO_0000673
so part of: LOC111058182
location: complement(join(3739045..3739449,3741048..3741182,3742246..3743711,3744258..3744429,3747819..3747912,3748435..3748554,3749177..3749331,3751580..3751807,3753631..3753810,3756927..3757122,3758753..3758976,3760633..3760810,3763680..3765420,3766557..3767845,3768528..3768715,3770166..3770407,3772434..3772734,3822226..3822255))
location: region:3739045-3822255:-1
so has part: feature:3822226-3822255:-1:exon
so has part: feature:3772434-3772734:-1:exon
so has part: feature:3770166-3770407:-1:exon
so has part: feature:3768528-3768715:-1:exon
so has part: feature:3766557-3767845:-1:exon
so has part: feature:3763680-3765420:-1:exon
so has part: feature:3760633-3760810:-1:exon
so has part: feature:3758753-3758976:-1:exon
so has part: feature:3756927-3757122:-1:exon
so has part: feature:3753631-3753810:-1:exon
so has part: feature:3751580-3751807:-1:exon
so has part: feature:3749177-3749331:-1:exon
so has part: feature:3748435-3748554:-1:exon
so has part: feature:3747819-3747912:-1:exon
so has part: feature:3744258-3744429:-1:exon
so has part: feature:3742246-3743711:-1:exon
so has part: feature:3741048-3741182:-1:exon
so has part: feature:3739045-3739449:-1:exon

XP_039293364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3822226-3822255:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3772434-3772734:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3770166-3770407:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3768528-3768715:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3766557-3767845:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3763680-3765420:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3760633-3760810:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3758753-3758976:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3756927-3757122:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3753631-3753810:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3751580-3751807:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3749177-3749331:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3748435-3748554:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3747819-3747912:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3744258-3744429:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3742246-3743711:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3741048-3741182:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3739045-3739449:-1:exon

LOC111054681
type: Gene
subclass of: SO_0000704
RO_0002162: 108931
gene: LOC111054681
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3781839..3806256)
location: region:3781839-3806256:-1
so has part: feature:3781839-3806256:-1:exon
subclass of: SO_0000010

111054681
type: Gene
SIO_000068: ncbigene

position:3781839:-1
position: 3781839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3806256:-1
position: 3806256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3781839-3806256:-1:exon

LOC111054681
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111054681
product: dnaJ homolog subfamily C member 28, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 13 long SRA reads, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_039437438.1
SIO_010081: LOC111054681
subclass of: SO_0000673
so part of: LOC111054681
location: complement(join(3781839..3782679,3785564..3785765,3788060..3788210,3794970..3795187,3801464..3801601,3802441..3802572,3804972..3805130,3806169..3806256))
location: region:3781839-3806256:-1
so has part: feature:3806169-3806256:-1:exon
so has part: feature:3804972-3805130:-1:exon
so has part: feature:3802441-3802572:-1:exon
so has part: feature:3801464-3801601:-1:exon
so has part: feature:3794970-3795187:-1:exon
so has part: feature:3788060-3788210:-1:exon
so has part: feature:3785564-3785765:-1:exon
so has part: feature:3781839-3782679:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3806169-3806256:-1:exon

position:3806169:-1
position: 3806169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3804972-3805130:-1:exon

position:3804972:-1
position: 3804972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3805130:-1
position: 3805130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3802441-3802572:-1:exon

position:3802441:-1
position: 3802441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3802572:-1
position: 3802572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3801464-3801601:-1:exon

position:3801464:-1
position: 3801464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3801601:-1
position: 3801601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3794970-3795187:-1:exon

position:3794970:-1
position: 3794970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3795187:-1
position: 3795187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3788060-3788210:-1:exon

position:3788060:-1
position: 3788060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3788210:-1
position: 3788210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3785564-3785765:-1:exon

position:3785564:-1
position: 3785564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3785765:-1
position: 3785765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3781839-3782679:-1:exon

position:3782679:-1
position: 3782679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111054681
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111054681
product: dnaJ homolog subfamily C member 28, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_039437439.1
SIO_010081: LOC111054681
subclass of: SO_0000673
so part of: LOC111054681
location: complement(join(3781841..3782679,3785564..3785765,3788060..3788210,3789778..3789828,3794970..3795187,3802441..3802572,3804972..3805130,3806169..3806256))
location: region:3781841-3806256:-1
so has part: feature:3806169-3806256:-1:exon
so has part: feature:3804972-3805130:-1:exon
so has part: feature:3802441-3802572:-1:exon
so has part: feature:3794970-3795187:-1:exon
so has part: feature:3789778-3789828:-1:exon
so has part: feature:3788060-3788210:-1:exon
so has part: feature:3785564-3785765:-1:exon
so has part: feature:3781841-3782679:-1:exon

position:3781841:-1
position: 3781841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3806169-3806256:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3804972-3805130:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3802441-3802572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3794970-3795187:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3789778-3789828:-1:exon

position:3789778:-1
position: 3789778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3789828:-1
position: 3789828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3788060-3788210:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3785564-3785765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3781841-3782679:-1:exon

LOC111054681
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 108931
gene: LOC111054681
product: dnaJ homolog subfamily C member 28, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 long SRA reads, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_039437437.1
SIO_010081: LOC111054681
subclass of: SO_0000673
so part of: LOC111054681
location: complement(join(3781841..3782679,3785564..3785765,3788060..3788210,3789778..3789828,3794970..3795187,3801464..3801601,3802441..3802572,3804972..3805130,3806169..3806256))
location: region:3781841-3806256:-1
so has part: feature:3806169-3806256:-1:exon
so has part: feature:3804972-3805130:-1:exon
so has part: feature:3802441-3802572:-1:exon
so has part: feature:3801464-3801601:-1:exon
so has part: feature:3794970-3795187:-1:exon
so has part: feature:3789778-3789828:-1:exon
so has part: feature:3788060-3788210:-1:exon
so has part: feature:3785564-3785765:-1:exon
so has part: feature:3781841-3782679:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3806169-3806256:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3804972-3805130:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3802441-3802572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3801464-3801601:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3794970-3795187:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3789778-3789828:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3788060-3788210:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3785564-3785765:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3781841-3782679:-1:exon

LOC111054681
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108931
gene: LOC111054681
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 28 isoform X3
translation: MMELVSKRKPITNLLMGQESIKFMYNYFQTNLKTNHGFLRCEYCTFKTDELSVKKSYYLLGVPYGSDQETVRQAFVQLVKKYHPDSGSEKADPQRFQEHTAPQHRQYLTYGGWGTGTPSQRERHYQKSRAETAVKNVFQHRMDKVISETVCTEEQALALKDKAEAKKIKTRFYHEFKKFFKHATVTPRYGLERLVEDLIQESMNKGEFDNLPGQGKPLGRQFDHHNPYVDLVTHKLNQVLIDNGFVPEWIQLQKEIRESEDEIRKKLLEERSRLGRLPLNRDDQIRWSRILDNTQIHVDKLNKKIGKYNLVVPMLQKQVVTFNLLREAQRVLEEGEHSKGEQSQPNQHQTSKTKKEDDGSGLFGLFSFLMKK
SIO_010081: LOC111054681
subclass of: SO_0000673
so part of: LOC111054681
location: complement(join(3782477..3782679,3785564..3785765,3788060..3788210,3789778..3789828,3794970..3795187,3802441..3802572,3804972..3805130,3806169..3806171))
location: region:3782477-3806171:-1
so has part: feature:3806169-3806171:-1:exon
so has part: feature:3804972-3805130:-1:exon
so has part: feature:3802441-3802572:-1:exon
so has part: feature:3794970-3795187:-1:exon
so has part: feature:3789778-3789828:-1:exon
so has part: feature:3788060-3788210:-1:exon
so has part: feature:3785564-3785765:-1:exon
so has part: feature:3782477-3782679:-1:exon

XP_039293373.1
type: Protein
SIO_000068: ncbiprotein

position:3782477:-1
position: 3782477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3806171:-1
position: 3806171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3806169-3806171:-1:exon