Anabaenopsis circularis NIES-21 plasmid plasmid2 DNA, nearly complete genome.
Bacteria; Cyanobacteriota; Cyanophyceae; Nostocales; Aphanizomenonaceae; Anabaenopsis.
Genome sequencing of cyanobaciteial culture collection at National Institute for Environmental Studies (NIES)
Submitted (23-JUN-2017) Contact:Yuu Hirose Toyohashi University of Technology, Department of Environmental and Life Sciences; Hibarigaoka-1-1 Tenpakucho, Toyohashi, Aichi 441-8122, Japan URL :http://mcc.nies.go.jp/ strainList.do?strainId=18&strainNumberEn=NIES-21
REFSEQ INFORMATION: The reference sequence was derived from\nAP018176.\nNBRP Genome Information Upgrading Program.: Genome sequencing of\ncyanobaciteial culture collection at National Institute for\nEnvironmental Studies (NIES).\n\nAnnotated using prokka 1.11 from http://www.vicbioinformatics.com.\nAnnotated at D-FAST https://dfast.nig.ac.jp\n\nAnnotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (released 2013). Information about the Pipeline can be\nfound here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: GS De Novo Assembler v. 2.9\nGenome Coverage :: 43x\nSequencing Technology :: Ilumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Date :: 09/28/2017 12:16:03\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS+\nAnnotation Software revision :: 4.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 6,068\nCDS (total) :: 5,955\nGenes (coding) :: 5,747\nCDS (coding) :: 5,747\nGenes (RNA) :: 113\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 97\nncRNAs :: 4\nPseudo Genes (total) :: 208\nPseudo Genes (ambiguous residues) :: 1 of 208\nPseudo Genes (frameshifted) :: 49 of 208\nPseudo Genes (incomplete) :: 144 of 208\nPseudo Genes (internal stop) :: 40 of 208\nPseudo Genes (multiple problems) :: 22 of 208\nCRISPR Arrays :: 6\n##Genome-Annotation-Data-END##
COORDINATES: similar to AA sequence:RefSeq:WP_015195177.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010994062.1
COORDINATES: similar to AA sequence:RefSeq:WP_019496513.1
COORDINATES: ab initio prediction:GeneMarkS+
Derived by automated computational analysis using gene prediction method: GeneMarkS+.
COORDINATES: similar to AA sequence:RefSeq:WP_009460002.1
COORDINATES: similar to AA sequence:RefSeq:WP_016871358.1
LuxR C-terminal-related transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016877527.1
Members of this family of hydrolases with an active site Cys residue belong to MEROPS family C26; Derived by automated computational analysis using gene prediction method: Protein Homology.
gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016863128.1
COORDINATES: similar to AA sequence:RefSeq:WP_016876062.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_016876061.1
COORDINATES: similar to AA sequence:RefSeq:WP_016877636.1
COORDINATES: similar to AA sequence:RefSeq:WP_015116130.1
COORDINATES: similar to AA sequence:RefSeq:WP_016953778.1
TnsA endonuclease N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016953779.1
COORDINATES: similar to AA sequence:RefSeq:WP_006197686.1
incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015112047.1
COORDINATES: protein motif:HMM:PF00656.20
COORDINATES: similar to AA sequence:RefSeq:WP_015115147.1
COORDINATES: similar to AA sequence:RefSeq:WP_017744434.1
COORDINATES: similar to AA sequence:RefSeq:WP_006621743.1
COORDINATES: similar to AA sequence:RefSeq:WP_016859420.1
COORDINATES: protein motif:HMM:PF13495.4
COORDINATES: similar to AA sequence:RefSeq:WP_015132649.1
COORDINATES: similar to AA sequence:RefSeq:WP_012596830.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_011318517.1
type II toxin-antitoxin system ParD family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_006197196.1
COORDINATES: similar to AA sequence:RefSeq:WP_012327519.1
COORDINATES: similar to AA sequence:RefSeq:WP_015186201.1
COORDINATES: protein motif:HMM:PF13646.4
COORDINATES: similar to AA sequence:RefSeq:WP_002706484.1
COORDINATES: similar to AA sequence:RefSeq:WP_015201603.1
COORDINATES: similar to AA sequence:RefSeq:WP_015173889.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993973.1
COORDINATES: similar to AA sequence:RefSeq:WP_011429076.1
COORDINATES: similar to AA sequence:RefSeq:WP_086557992.1
COORDINATES: similar to AA sequence:RefSeq:WP_017292051.1
COORDINATES: similar to AA sequence:RefSeq:WP_009768120.1
COORDINATES: similar to AA sequence:RefSeq:WP_017301758.1
COORDINATES: similar to AA sequence:RefSeq:WP_007177104.1
formaldehyde dehydrogenase, glutathione-independent
COORDINATES: protein motif:HMM:PF00072.22
COORDINATES: similar to AA sequence:RefSeq:WP_015247386.1
cyclic nucleotide-binding domain-containing thioredoxin-disulfide reductase
COORDINATES: similar to AA sequence:RefSeq:WP_007915749.1
UBP-type zinc finger domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016862832.1
TrkA C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016862831.1
DNA starvation/stationary phase protection protein Dps
COORDINATES: similar to AA sequence:RefSeq:WP_020184239.1
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017308321.1
COORDINATES: similar to AA sequence:RefSeq:WP_016862830.1
type 1 glutamine amidotransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016862829.1
COORDINATES: similar to AA sequence:RefSeq:WP_009239872.1
COORDINATES: similar to AA sequence:RefSeq:WP_017735052.1
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006019328.1
COORDINATES: similar to AA sequence:RefSeq:WP_016862826.1
COORDINATES: protein motif:HMM:PF02518.24,HMM:TIGR00229
COORDINATES: similar to AA sequence:RefSeq:WP_016872102.1
COORDINATES: protein motif:HMM:PF00072.22,HMM:PF00512.23,HMM:PF02518.24
COORDINATES: similar to AA sequence:RefSeq:WP_008190995.1
COORDINATES: similar to AA sequence:RefSeq:WP_017745900.1
polar amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_017745901.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012412871.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012412872.1
COORDINATES: similar to AA sequence:RefSeq:WP_017313939.1
COORDINATES: similar to AA sequence:RefSeq:WP_017653105.1
COORDINATES: similar to AA sequence:RefSeq:WP_015217662.1
COORDINATES: similar to AA sequence:RefSeq:WP_002784626.1
crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012413303.1
COORDINATES: similar to AA sequence:RefSeq:WP_016864593.1
incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015214247.1
COORDINATES: similar to AA sequence:RefSeq:WP_010996219.1
frameshifted; incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015111318.1
esterase-like activity of phytase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012412053.1
COORDINATES: similar to AA sequence:RefSeq:WP_011321388.1
COORDINATES: similar to AA sequence:RefSeq:WP_016953650.1
COORDINATES: protein motif:HMM:PF07592.9
COORDINATES: similar to AA sequence:RefSeq:WP_076611097.1
incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017313869.1
COORDINATES: similar to AA sequence:RefSeq:WP_012412963.1
incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010999782.1
COORDINATES: similar to AA sequence:RefSeq:WP_012412965.1
COORDINATES: similar to AA sequence:RefSeq:WP_012412966.1
COORDINATES: protein motif:HMM:PF12770.5
COORDINATES: similar to AA sequence:RefSeq:WP_015199115.1
filamentous hemagglutinin N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016873927.1
COORDINATES: similar to AA sequence:RefSeq:WP_010999790.1
COORDINATES: similar to AA sequence:RefSeq:WP_016948814.1
COORDINATES: similar to AA sequence:RefSeq:WP_012412292.1
COORDINATES: protein motif:HMM:PF01609.19
COORDINATES: protein motif:HMM:PF13808.4
COORDINATES: similar to AA sequence:RefSeq:WP_011321702.1
COORDINATES: similar to AA sequence:RefSeq:WP_006633506.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_012165676.1
COORDINATES: similar to AA sequence:RefSeq:WP_012413103.1
COORDINATES: similar to AA sequence:RefSeq:WP_010999809.1
COORDINATES: protein motif:HMM:PF01867.14
COORDINATES: similar to AA sequence:RefSeq:WP_016878747.1
COORDINATES: similar to AA sequence:RefSeq:WP_010999810.1
COORDINATES: similar to AA sequence:RefSeq:WP_015111171.1
COORDINATES: similar to AA sequence:RefSeq:WP_016875676.1
COORDINATES: similar to AA sequence:RefSeq:WP_012413031.1
COORDINATES: similar to AA sequence:RefSeq:WP_017804028.1
COORDINATES: similar to AA sequence:RefSeq:WP_012413033.1
COORDINATES: similar to AA sequence:RefSeq:WP_010999922.1
COORDINATES: protein motif:HMM:PF07505.9
COORDINATES: similar to AA sequence:RefSeq:WP_013323828.1
COORDINATES: similar to AA sequence:RefSeq:WP_010999832.1
COORDINATES: similar to AA sequence:RefSeq:WP_012413039.1
COORDINATES: similar to AA sequence:RefSeq:WP_010999836.1
COORDINATES: similar to AA sequence:RefSeq:WP_012413042.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316611.1
COORDINATES: similar to AA sequence:RefSeq:WP_012413254.1
COORDINATES: similar to AA sequence:RefSeq:WP_016867385.1
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:PF03682.11
COORDINATES: similar to AA sequence:RefSeq:WP_017655877.1
COORDINATES: similar to AA sequence:RefSeq:WP_009455318.1
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009455319.1
COORDINATES: nucleotide motif:Rfam:12.0:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_015216193.1
COORDINATES: similar to AA sequence:RefSeq:WP_006197474.1
catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017745589.1
COORDINATES: protein motif:HMM:PF00805.20
COORDINATES: similar to AA sequence:RefSeq:NP_923426.1
COORDINATES: similar to AA sequence:RefSeq:WP_009631372.1
COORDINATES: similar to AA sequence:RefSeq:WP_016860996.1
COORDINATES: similar to AA sequence:RefSeq:WP_012408125.1
COORDINATES: similar to AA sequence:RefSeq:WP_010999651.1
COORDINATES: similar to AA sequence:RefSeq:WP_007354428.1
COORDINATES: similar to AA sequence:RefSeq:WP_012413104.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316392.1
COORDINATES: similar to AA sequence:RefSeq:WP_015195723.1
COORDINATES: similar to AA sequence:RefSeq:WP_017308257.1
COORDINATES: similar to AA sequence:RefSeq:WP_017308258.1
COORDINATES: similar to AA sequence:RefSeq:WP_017308259.1
COORDINATES: similar to AA sequence:RefSeq:WP_015328947.1
COORDINATES: similar to AA sequence:RefSeq:WP_016948811.1
COORDINATES: similar to AA sequence:RefSeq:WP_015196400.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316409.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316408.1
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_016864464.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307709.1
COORDINATES: similar to AA sequence:RefSeq:WP_016863656.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316359.1
COORDINATES: similar to AA sequence:RefSeq:WP_016949852.1
COORDINATES: similar to AA sequence:RefSeq:WP_017720068.1
(2Fe-2S) ferredoxin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015185346.1
COORDINATES: similar to AA sequence:RefSeq:WP_016951555.1
COORDINATES: similar to AA sequence:RefSeq:WP_010999626.1
COORDINATES: similar to AA sequence:RefSeq:WP_012409702.1
COORDINATES: similar to AA sequence:RefSeq:WP_012595139.1
COORDINATES: similar to AA sequence:RefSeq:WP_015115923.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307650.1
COORDINATES: similar to AA sequence:RefSeq:WP_010999624.1
COORDINATES: similar to AA sequence:RefSeq:WP_015113864.1
COORDINATES: similar to AA sequence:RefSeq:WP_015115922.1
COORDINATES: similar to AA sequence:RefSeq:WP_012160949.1
COORDINATES: similar to AA sequence:RefSeq:WP_010999619.1
COORDINATES: similar to AA sequence:RefSeq:WP_010999618.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316547.1
COORDINATES: similar to AA sequence:RefSeq:WP_012413099.1
COORDINATES: similar to AA sequence:RefSeq:WP_006197200.1
COORDINATES: similar to AA sequence:RefSeq:WP_015138344.1
histidine kinase dimerization/phosphoacceptor domain -containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007358376.1
hybrid sensor histidine kinase/response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015114603.1
COORDINATES: similar to AA sequence:RefSeq:WP_015126641.1
COORDINATES: similar to AA sequence:RefSeq:WP_015181696.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016877666.1
COORDINATES: similar to AA sequence:RefSeq:WP_016877667.1
COORDINATES: similar to AA sequence:RefSeq:WP_012160769.1
COORDINATES: similar to AA sequence:RefSeq:NP_926252.1
COORDINATES: similar to AA sequence:RefSeq:WP_010476736.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316581.1
COORDINATES: similar to AA sequence:RefSeq:WP_015197850.1
COORDINATES: similar to AA sequence:RefSeq:WP_015157880.1
COORDINATES: similar to AA sequence:RefSeq:WP_015115910.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316356.1
COORDINATES: similar to AA sequence:RefSeq:WP_010999711.1
COORDINATES: similar to AA sequence:RefSeq:WP_017308358.1
ssl1498 family light-harvesting-like protein
COORDINATES: similar to AA sequence:RefSeq:WP_076611692.1
COORDINATES: similar to AA sequence:RefSeq:WP_015196653.1
COORDINATES: protein motif:HMM:PF05239.14
COORDINATES: similar to AA sequence:RefSeq:WP_002786988.1
COORDINATES: similar to AA sequence:RefSeq:WP_017298078.1
COORDINATES: similar to AA sequence:RefSeq:WP_017322928.1
COORDINATES: protein motif:HMM:PF00036.30
COORDINATES: similar to AA sequence:RefSeq:WP_017308151.1
COORDINATES: similar to AA sequence:RefSeq:WP_015112508.1
COORDINATES: protein motif:HMM:PF00400.30,HMM:PF00656.20
COORDINATES: similar to AA sequence:RefSeq:WP_012597532.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316572.1
COORDINATES: similar to AA sequence:RefSeq:WP_019495793.1
COORDINATES: protein motif:HMM:PF00931.20
COORDINATES: similar to AA sequence:RefSeq:WP_016864160.1
COORDINATES: similar to AA sequence:RefSeq:WP_010999692.1
COORDINATES: similar to AA sequence:RefSeq:WP_010999593.1
COORDINATES: protein motif:HMM:PF13443.4
COORDINATES: protein motif:HMM:PF01526.15
COORDINATES: similar to AA sequence:RefSeq:WP_015155287.1
COORDINATES: similar to AA sequence:RefSeq:WP_009386995.1
COORDINATES: similar to AA sequence:RefSeq:WP_015163759.1