Anabaenopsis circularis NIES-21 plasmid plasmid1 DNA, complete genome.
Bacteria; Cyanobacteriota; Cyanophyceae; Nostocales; Aphanizomenonaceae; Anabaenopsis.
Genome sequencing of cyanobaciteial culture collection at National Institute for Environmental Studies (NIES)
Submitted (23-JUN-2017) Contact:Yuu Hirose Toyohashi University of Technology, Department of Environmental and Life Sciences; Hibarigaoka-1-1 Tenpakucho, Toyohashi, Aichi 441-8122, Japan URL :http://mcc.nies.go.jp/ strainList.do?strainId=18&strainNumberEn=NIES-21
REFSEQ INFORMATION: The reference sequence was derived from\nAP018175.\nNBRP Genome Information Upgrading Program.: Genome sequencing of\ncyanobaciteial culture collection at National Institute for\nEnvironmental Studies (NIES).\n\nAnnotated using prokka 1.11 from http://www.vicbioinformatics.com.\nAnnotated at D-FAST https://dfast.nig.ac.jp\n\nAnnotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (released 2013). Information about the Pipeline can be\nfound here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: GS De Novo Assembler v. 2.9\nGenome Coverage :: 43x\nSequencing Technology :: Ilumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Date :: 09/28/2017 12:16:03\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS+\nAnnotation Software revision :: 4.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 6,068\nCDS (total) :: 5,955\nGenes (coding) :: 5,747\nCDS (coding) :: 5,747\nGenes (RNA) :: 113\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 97\nncRNAs :: 4\nPseudo Genes (total) :: 208\nPseudo Genes (ambiguous residues) :: 1 of 208\nPseudo Genes (frameshifted) :: 49 of 208\nPseudo Genes (incomplete) :: 144 of 208\nPseudo Genes (internal stop) :: 40 of 208\nPseudo Genes (multiple problems) :: 22 of 208\nCRISPR Arrays :: 6\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_017749978.1
incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011316832.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017307517.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316834.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307515.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316836.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316837.1
COORDINATES: similar to AA sequence:RefSeq:WP_016877671.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993882.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316840.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869117.1
COORDINATES: similar to AA sequence:RefSeq:WP_015328542.1
four-helix bundle copper-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017286528.1
COORDINATES: similar to AA sequence:RefSeq:WP_015132053.1
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015132054.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307554.1
COORDINATES: similar to AA sequence:RefSeq:WP_016877572.1
COORDINATES: similar to AA sequence:RefSeq:WP_016877587.1
COORDINATES: similar to AA sequence:RefSeq:WP_017655367.1
COORDINATES: similar to AA sequence:RefSeq:WP_016863707.1
COORDINATES: similar to AA sequence:RefSeq:WP_016863706.1
heavy metal-responsive transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016863703.1
COORDINATES: similar to AA sequence:RefSeq:WP_016863702.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993966.1
heavy-metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016863700.1
COORDINATES: similar to AA sequence:RefSeq:WP_016863699.1
COORDINATES: similar to AA sequence:RefSeq:WP_016863698.1
COORDINATES: similar to AA sequence:RefSeq:WP_011320915.1
COORDINATES: similar to AA sequence:RefSeq:WP_016863696.1
COORDINATES: similar to AA sequence:RefSeq:WP_016863695.1
COORDINATES: similar to AA sequence:RefSeq:WP_015176500.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307611.1
COORDINATES: similar to AA sequence:RefSeq:WP_017311474.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993921.1
COORDINATES: similar to AA sequence:RefSeq:WP_017292195.1
COORDINATES: similar to AA sequence:RefSeq:WP_019501318.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993918.1
isoprenylcysteine carboxylmethyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017307543.1
COORDINATES: similar to AA sequence:RefSeq:WP_015328808.1
COORDINATES: similar to AA sequence:RefSeq:WP_012409736.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869137.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993865.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869139.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869140.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307491.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869142.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993860.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307488.1
COORDINATES: similar to AA sequence:RefSeq:WP_017740895.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869146.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307485.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869148.1
COORDINATES: ab initio prediction:GeneMarkS+
Derived by automated computational analysis using gene prediction method: GeneMarkS+.
COORDINATES: protein motif:HMM:PF06908.9
COORDINATES: similar to AA sequence:RefSeq:WP_011316879.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316880.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307478.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993846.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993845.1
COORDINATES: similar to AA sequence:RefSeq:WP_012413367.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307475.1
COORDINATES: similar to AA sequence:RefSeq:WP_017308255.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307668.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869159.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869160.1
COORDINATES: similar to AA sequence:RefSeq:WP_016877634.1
COORDINATES: protein motif:HMM:PF07728.12
COORDINATES: similar to AA sequence:RefSeq:WP_015220301.1
COORDINATES: similar to AA sequence:RefSeq:WP_015220302.1
COORDINATES: similar to AA sequence:RefSeq:WP_015220303.1
PP2C family serine/threonine-protein phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_015224158.1
COORDINATES: similar to AA sequence:RefSeq:WP_016874575.1
COORDINATES: protein motif:HMM:PF00004.27
COORDINATES: similar to AA sequence:RefSeq:WP_015186453.1
COORDINATES: similar to AA sequence:RefSeq:WP_015186452.1
COORDINATES: similar to AA sequence:RefSeq:WP_015146106.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015186451.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015186450.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316363.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316364.1
TnsA endonuclease N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016869168.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869169.1
COORDINATES: similar to AA sequence:RefSeq:WP_017314031.1
COORDINATES: similar to AA sequence:RefSeq:WP_017314030.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869172.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869173.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869174.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869175.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869176.1
COORDINATES: similar to AA sequence:RefSeq:WP_015329009.1
COORDINATES: similar to AA sequence:RefSeq:WP_015329008.1
COORDINATES: similar to AA sequence:RefSeq:WP_015329007.1
COORDINATES: similar to AA sequence:RefSeq:WP_012632492.1
COORDINATES: similar to AA sequence:RefSeq:WP_012408908.1
BREX-6 system adenine-specific DNA-methyltransferase PglX
COORDINATES: similar to AA sequence:RefSeq:WP_012408907.1
COORDINATES: similar to AA sequence:RefSeq:WP_012408906.1
COORDINATES: similar to AA sequence:RefSeq:WP_015158637.1
COORDINATES: similar to AA sequence:RefSeq:WP_012408905.1
COORDINATES: protein motif:HMM:PF05523.9
COORDINATES: similar to AA sequence:RefSeq:WP_017291494.1
COORDINATES: similar to AA sequence:RefSeq:WP_020739608.1
glutathione S-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007354648.1
COORDINATES: similar to AA sequence:RefSeq:WP_012408902.1
COORDINATES: similar to AA sequence:RefSeq:WP_012408901.1
COORDINATES: similar to AA sequence:RefSeq:WP_012408900.1
COORDINATES: similar to AA sequence:RefSeq:WP_012408899.1
COORDINATES: similar to AA sequence:RefSeq:WP_015171873.1
COORDINATES: similar to AA sequence:RefSeq:WP_015182984.1
COORDINATES: similar to AA sequence:RefSeq:WP_012408895.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017314025.1
COORDINATES: similar to AA sequence:RefSeq:WP_010994007.1
COORDINATES: similar to AA sequence:RefSeq:WP_017740811.1
COORDINATES: similar to AA sequence:RefSeq:WP_010994005.1
COORDINATES: similar to AA sequence:RefSeq:WP_010994004.1
phage terminase large subunit family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011316698.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316699.1
COORDINATES: similar to AA sequence:RefSeq:WP_010994001.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316701.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993999.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316703.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993994.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307637.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993992.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316707.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993990.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011316709.1
COORDINATES: similar to AA sequence:RefSeq:WP_015111320.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316711.1
COORDINATES: similar to AA sequence:RefSeq:WP_015111321.1
COORDINATES: similar to AA sequence:RefSeq:WP_015111322.1
Rpn family recombination-promoting nuclease/putative transposase
COORDINATES: similar to AA sequence:RefSeq:WP_017307628.1
COORDINATES: protein motif:HMM:PF07592.9
COORDINATES: similar to AA sequence:RefSeq:WP_016953650.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993982.1
COORDINATES: similar to AA sequence:RefSeq:WP_015111325.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316717.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307624.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993978.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307622.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993976.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993975.1
incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017740774.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993973.1
COORDINATES: similar to AA sequence:RefSeq:WP_010999745.1
COORDINATES: similar to AA sequence:RefSeq:WP_010999744.1
COORDINATES: similar to AA sequence:RefSeq:WP_015212407.1
COORDINATES: similar to AA sequence:RefSeq:WP_010999742.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307615.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316728.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316729.1
COORDINATES: similar to AA sequence:RefSeq:WP_012412977.1
internal stop; incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006633387.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009632076.1
COORDINATES: similar to AA sequence:RefSeq:WP_004431261.1
COORDINATES: similar to AA sequence:RefSeq:WP_017308338.1
COORDINATES: similar to AA sequence:RefSeq:WP_015174316.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316779.1
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_010993909.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307535.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316783.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316784.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993905.1
COORDINATES: similar to AA sequence:RefSeq:WP_017740750.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993903.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307529.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993901.1
COORDINATES: similar to AA sequence:RefSeq:WP_016877439.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316825.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316826.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307524.1
COORDINATES: protein motif:HMM:PF05729.10,HMM:PF13646.4
COORDINATES: similar to AA sequence:RefSeq:WP_009545499.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307521.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307520.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307519.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307650.1