Mesorhizobium amorphae CCNWGS0123 plasmid pM0123c.
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
Resequencineg of Mesorhizobium amorphae CCNWGS0123 and comparative plasmidome of 23 symbiotic plasmids from Rhizobia
Submitted (20-APR-2016) College of Life Science, Northwest A&F University, State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, 22 Xinong Road, Yangling 712100, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP015321.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Celera Assembler v. 8.1\nGenome Coverage :: 134.86X\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/27/2023 03:22:01\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,961\nCDSs (total) :: 6,899\nGenes (coding) :: 6,671\nCDSs (with protein) :: 6,671\nGenes (RNA) :: 62\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 52\nncRNAs :: 4\nPseudo Genes (total) :: 228\nCDSs (without protein) :: 228\nPseudo Genes (ambiguous residues) :: 0 of 228\nPseudo Genes (frameshifted) :: 146 of 228\nPseudo Genes (incomplete) :: 159 of 228\nPseudo Genes (internal stop) :: 39 of 228\nPseudo Genes (multiple problems) :: 96 of 228\n##Genome-Annotation-Data-END##
COORDINATES: similar to AA sequence:RefSeq:WP_006205784.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
ArdC-like ssDNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013913793.1
COORDINATES: similar to AA sequence:RefSeq:WP_003524944.1
COORDINATES: similar to AA sequence:RefSeq:WP_010915959.1
COORDINATES: similar to AA sequence:RefSeq:WP_010915958.1
COORDINATES: similar to AA sequence:RefSeq:WP_010915957.1
COORDINATES: similar to AA sequence:RefSeq:WP_010915956.1
ParB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_076612246.1
GO:0004803 - transposase activity [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.