Human adenovirus B1, complete genome.
type: Entry
definition: Human adenovirus B1, complete genome.
sequence version: NC_011203.1
sequence date: 2020-12-20
sequence: sequence
division: VRL
label: NC_011203.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA485481
keyword: RefSeq
source: Human mastadenovirus B (HAdV-B)
organism: Human mastadenovirus B
taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus.
reference: 1
references: 16169033
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by Dr Andrew Davison\n(MRC Virology Unit, Glasgow, UK) and Dr Balazs Harrach (Veterinary\nMedical Research Institute, Budapest, Hungary). The reference\nsequence was derived from DQ086466.\nCURATION:\n Proteins: A standard nomenclature has been applied so that\northologs have the same name. Functional information may have been\npropagated from other adenovirus species.\n Protein-coding regions: The initiation codon for each CDS is\nassigned with as much confidence as possible. CDSs presumably\ninherited from the last common ancestor of all adenoviruses are\nindicated as genus-common, and all other CDSs as genus-specific.\nCDSs that have paralogues in one or more genomes are listed as\nmembers of named families. The evolutionary history of E3 and E4 is\ncomplex, frequently involving generation or loss of paralogues in\nwhole or in part, accompanied by rapid sequence divergence. In E3,\nthis is evident in a set of tandemly arranged CDSs encoding\ntransmembrane proteins. All of these are listed as members of the\nMP family, regardless of whether sequence conservation is\ndetectable.\n Transcripts: In mastadenoviruses, transcription arises from\nthe early genes (E1A, E1B, E2A, E2B, E3 and E4), the intermediate\ngenes (IX and IVa2) and the late genes (L, U and E2A-L). Certain\ntranscriptional features are supported by experimental data for\nsome of these genes in a few adenoviruses (particularly human\nadenovirus C). All transcriptional features not marked as\nexperimentally supported are predictions made on the basis of\nconservation and relevance to CDS expression. The degree of\nconfidence in each prediction depends on the feature under\nconsideration. In primate adenoviruses, predictions for E3, E4 and\nthe 5'-regions of E2A and E2B are generally the least certain. In\nnon-primate mastadenoviruses, this trend is accentuated to the\ndegree that predictions for introns in E3 and E4 are not provided,\nand those for the 5'-re…

sequence
subclass of: SO_0000353
sequence length: 35343
topology: linear
so has quality: SO_0000987
location: 1..35343
location: region:1-35343:1
RO_0002162: 108098

NC_011203
type: RefSeq
SIO_000068: refseq

PRJNA485481
type: BioProject
SIO_000068: bioproject

1
title: The nucleotide sequence and a first generation gene transfer vector of species B human adenovirus serotype 3
author: Sirena, D.
author: Ruzsics, Z.
author: Schaffner, W.
author: Greber, U.F.
author: Hemmi, S.
journal: Virology
volume: 343
issue: 2
pages: 283-298
year: 2005
pubmed: 16169033

16169033
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
journal: Submitted (04-SEP-2008) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Hemmi, S.
author: Greber, U.F.
author: Schaffner, W.
author: Sirena, D.
journal: Submitted (06-JUN-2005) Institute of Molecular Biology, University of Zurich, Winterthurerstrasse 190, Zurich 8057, Switzerland

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35343:1
position: 35343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-35343:1:source
so part of: sequence
organism: Human mastadenovirus B
mol type: genomic DNA
strain: GB
serotype: Human adenovirus 3
host: Homo sapiens
type: 1
acronym: HAdV-3
acronym: HAdV-B1

108098
type: Taxonomy
SIO_000068: taxonomy

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 108098
standard name: ITR
rpt type: inverted
so part of: sequence
location: 1..136
location: region:1-136:1
so has part: feature:1-136:1:region

position:136:1
position: 136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-136:1:region

HAdVB1_gp01
type: Gene
subclass of: SO_0000704
RO_0002162: 108098
gene: E1A
locus tag: HAdVB1_gp01
so part of: sequence
location: 480..1499
location: region:480-1499:1
so has part: feature:480-1499:1:exon
subclass of: SO_0000010

6870531
type: Gene
SIO_000068: ncbigene

position:480:1
position: 480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1499:1
position: 1499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480-1499:1:exon

HAdVB1_gp01
type: Feature
subclass of: SO_0000001
RO_0002162: 108098
regulatory class: TATA_box
gene: E1A
locus tag: HAdVB1_gp01
SIO_010081: HAdVB1_gp01
subclass of: SO_0000673
so part of: HAdVB1_gp01
location: 480..485
location: region:480-485:1
so has part: feature:480-485:1:exon

position:485:1
position: 485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480-485:1:exon

HAdVB1_gp01
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: E1A
locus tag: HAdVB1_gp01
function: gene regulation
function: cell cycle regulation
function: transformation
note: alternative splicing utilizing nonconserved sites may produce additional proteins; genus-specific
codon start: 1
product: control protein E1A
translation: MRHLRFLPQEVISSETGIEILEFVVNTLMGDDPEPPVQPFDPPTLHDLYDLEIDGPEDPNEEAVNGFFTDSMLLAADEGLDINPPPETLVTPGVVVESGIGGKKLPDLGAAEMDLRCYEEGFPPSDDEDGETEQSIHTAVNEGVKAASDVFKLDCPELPGHGCKSCEFHRNNTGMKELLCSLCYMRMHCHFIYSPVSDDESPSPDSTTSPPEIQAPAPANVCKPIPVKPKPGKRPAVDKLEDLLEGGDGPLDLSTRKLPRQ
SIO_010081: HAdVB1_gp01
subclass of: SO_0000673
so part of: HAdVB1_gp01
location: join(576..1155,1250..1455)
location: region:576-1455:1
so has part: feature:576-1155:1:exon
so has part: feature:1250-1455:1:exon

YP_002213765.1
type: Protein
SIO_000068: ncbiprotein

position:576:1
position: 576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1455:1
position: 1455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576-1155:1:exon

position:1155:1
position: 1155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1250-1455:1:exon

position:1250:1
position: 1250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HAdVB1_gp01
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: E1A
locus tag: HAdVB1_gp01
SIO_010081: HAdVB1_gp01
subclass of: SO_0000673
so part of: HAdVB1_gp01
location: 1156..1249
location: region:1156-1249:1
so has part: feature:1156-1249:1:exon

position:1156:1
position: 1156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1249:1
position: 1249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1156-1249:1:exon

HAdVB1_gp01
type: Feature
subclass of: SO_0000001
RO_0002162: 108098
regulatory class: polyA_signal_sequence
gene: E1A
locus tag: HAdVB1_gp01
SIO_010081: HAdVB1_gp01
subclass of: SO_0000673
so part of: HAdVB1_gp01
location: 1494..1499
location: region:1494-1499:1
so has part: feature:1494-1499:1:exon

position:1494:1
position: 1494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1494-1499:1:exon

HAdVB1_gp02
type: Gene
subclass of: SO_0000704
RO_0002162: 108098
gene: E1B
locus tag: HAdVB1_gp02
so part of: sequence
location: 1549..3918
location: region:1549-3918:1
so has part: feature:1549-3918:1:exon
subclass of: SO_0000010

6870515
type: Gene
SIO_000068: ncbigene

position:1549:1
position: 1549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3918:1
position: 3918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1549-3918:1:exon

HAdVB1_gp02
type: Feature
subclass of: SO_0000001
RO_0002162: 108098
regulatory class: TATA_box
gene: E1B
locus tag: HAdVB1_gp02
SIO_010081: HAdVB1_gp02
subclass of: SO_0000673
so part of: HAdVB1_gp02
location: 1549..1554
location: region:1549-1554:1
so has part: feature:1549-1554:1:exon

position:1554:1
position: 1554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1549-1554:1:exon

HAdVB1_gp02
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: E1B
locus tag: HAdVB1_gp02
function: apoptosis
function: transformation
note: genus-specific
codon start: 1
product: control protein E1B 19K
translation: MEVWAILEDLRQTKLLLENASDGVSGLWRFWFGGDLARLVFRIKQDYREEFEKLLDDSPGLFEALNLGHQAHFKEKVLSVLDFSTPGRTAAAVAFLTFILDKWIRQTHFSKGYVLDFIAAALWRTWKARRMRTILDYWPVQPLGVAGILRHPPTMPAVLQEEQQEDNPRAGLDPPVEE
SIO_010081: HAdVB1_gp02
subclass of: SO_0000673
so part of: HAdVB1_gp02
location: 1603..2139
location: region:1603-2139:1
so has part: feature:1603-2139:1:exon

YP_002213766.1
type: Protein
SIO_000068: ncbiprotein

position:1603:1
position: 1603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2139:1
position: 2139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1603-2139:1:exon

HAdVB1_gp02
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: E1B
locus tag: HAdVB1_gp02
function: apoptosis
function: DNA damage response
function: RNA metabolism and transport
function: transformation
note: alternative splicing utilizing nonconserved sites may produce additional proteins; genus-specific
codon start: 1
product: control protein E1B 55K
translation: MDPPNSLQQGIRFGFHSSSFVENMEGSQDEDNLRLLASAASGSSRDTETPTDHASGSAGGAAGGQSESRPGPSGGGVADLFPELRRVLTRSTTSGQNRGIKRERNPSGNNSRTELALSLMSRRRPETVWWHEVQSEGRDEVSILQEKYSLEQLKTCWLEPEDDWEVAIRNYAKISLRPDKQYRITKKINIRNACYISGNGAEVIIDTQDKAVFRCCMMGMWPGVVGMEAVTLMNIRFKGDGYNGIVFMANTKLILHGCSFFGFNNTCVEAWGQVSVRGCSFYACWIATSGRVKSQLSVKKCMFERCNLGILNEGEARVRHCAATETGCFILIKGNASVKHNMICGHSDERPYQMLTCAGGHCNILATVHIVSHARKKWPVFEHNVITKCTMHIGGRRGMFMPYQCNMNHVKVMLEPDAFSRVSLTGIFDMNIQLWKILRYDDTKPRVRACECGGKHARFQPVCVDVTEDLRPDHLVLACTGAEFGSSGEETD
SIO_010081: HAdVB1_gp02
subclass of: SO_0000673
so part of: HAdVB1_gp02
location: 1908..3386
location: region:1908-3386:1
so has part: feature:1908-3386:1:exon

YP_002213767.1
type: Protein
SIO_000068: ncbiprotein

position:1908:1
position: 1908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3386:1
position: 3386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1908-3386:1:exon

HAdVB1_gp03
type: Gene
subclass of: SO_0000704
RO_0002162: 108098
gene: IX
locus tag: HAdVB1_gp03
so part of: sequence
location: 3419..3918
location: region:3419-3918:1
so has part: feature:3419-3918:1:exon
subclass of: SO_0000010

6870516
type: Gene
SIO_000068: ncbigene

position:3419:1
position: 3419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3419-3918:1:exon

HAdVB1_gp03
type: Feature
subclass of: SO_0000001
RO_0002162: 108098
regulatory class: TATA_box
gene: IX
locus tag: HAdVB1_gp03
SIO_010081: HAdVB1_gp03
subclass of: SO_0000673
so part of: HAdVB1_gp03
location: 3419..3424
location: region:3419-3424:1
so has part: feature:3419-3424:1:exon

position:3424:1
position: 3424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3419-3424:1:exon

HAdVB1_gp03
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: IX
locus tag: HAdVB1_gp03
function: capsid morphogenesis
note: genus-specific
codon start: 1
product: capsid protein IX
translation: MSGSASFEGGVFSPYLTGRLPPWAGVRQNVMGSTVDGRPVQPANSSTLTYATLSSSPLDAAAAAAATAAANTILGMGYYGSIVANSSSSNNPSTLAEDKLLVLLAQLEALTQRLGELSKQVAQLREQTESAVATAKSK
SIO_010081: HAdVB1_gp03
subclass of: SO_0000673
so part of: HAdVB1_gp03
location: 3480..3896
location: region:3480-3896:1
so has part: feature:3480-3896:1:exon

YP_002213768.1
type: Protein
SIO_000068: ncbiprotein

position:3480:1
position: 3480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3896:1
position: 3896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3480-3896:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 108098
regulatory class: polyA_signal_sequence
note: E1B, IX
so part of: sequence
location: 3892..3897
location: region:3892-3897:1
so has part: feature:3892-3897:1:region

position:3892:1
position: 3892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3897:1
position: 3897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3892-3897:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 108098
regulatory class: polyA_signal_sequence
note: E1B, IX
so part of: sequence
location: 3909..3914
location: region:3909-3914:1
so has part: feature:3909-3914:1:region

position:3909:1
position: 3909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3914:1
position: 3914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3909-3914:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 108098
regulatory class: polyA_signal_sequence
note: E1B, IX
so part of: sequence
location: 3913..3918
location: region:3913-3918:1
so has part: feature:3913-3918:1:region

position:3913:1
position: 3913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3913-3918:1:region

HAdVB1_gp04
type: Gene
subclass of: SO_0000704
RO_0002162: 108098
gene: E2B
locus tag: HAdVB1_gp04
so part of: sequence
location: complement(3947..26643)
location: region:3947-26643:-1
so has part: feature:3947-26643:-1:exon
subclass of: SO_0000010

6870517
type: Gene
SIO_000068: ncbigene

position:3947:-1
position: 3947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26643:-1
position: 26643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3947-26643:-1:exon

HAdVB1_gp05
type: Gene
subclass of: SO_0000704
RO_0002162: 108098
gene: IVa2
locus tag: HAdVB1_gp05
so part of: sequence
location: complement(3947..5572)
location: region:3947-5572:-1
so has part: feature:3947-5572:-1:exon
subclass of: SO_0000010

6870518
type: Gene
SIO_000068: ncbigene

position:5572:-1
position: 5572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3947-5572:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 108098
regulatory class: polyA_signal_sequence
note: IVa2, E2B
so part of: sequence
location: complement(3947..3952)
location: region:3947-3952:-1
so has part: feature:3947-3952:-1:region

position:3952:-1
position: 3952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3947-3952:-1:region

HAdVB1_gp05
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: IVa2
locus tag: HAdVB1_gp05
function: gene regulation
function: DNA encapsidation
function: capsid morphogenesis
note: putative ATPase; genus-common
codon start: 1
product: encapsidation protein IVa2
translation: METKGRQSAAVLDQQDESEAHPRKRPTRRAPLHRDGNNPDSDAATMEGSDPGSAGRPSSDSLLQEPSQPAKRGGLLDRDAIEHITELWDRLELLQQTLSKMPMADGLKPLKNFSSLQELLSLGGERLLTDLVRENIHVREMMNEVAPLLREDGSCRSLNYHLQPVIGVIYGPTGCGKSQLLRNLLSSQLITPAPETVFFIAPQVDMIPPSELKAWEMQICEGNYAPGPEGTFIPQSGTLRPKFIKMAYDDLTQEHNYDVSDPRNVFARAAAHGPIAIIMDECMENLGGHKGVSKFFHAFPSKLHDKFPKCTGYTVLVVLHNMNPRRDLGGNIANLKIQSKMHIISPRMHPSQLNRFVNTYTKGLPVAISLLLKDIVQHHALRPCYDWVIYNTTPEQEALQWSYLHPRDGLMPMYLNIQSHLYRVLEKIHRVLNDRDRWSRAYRARKIK
SIO_010081: HAdVB1_gp05
subclass of: SO_0000673
so part of: HAdVB1_gp05
location: complement(join(3948..5281,5560..5572))
location: region:3948-5572:-1
so has part: feature:5560-5572:-1:exon
so has part: feature:3948-5281:-1:exon

YP_002213830.1
type: Protein
SIO_000068: ncbiprotein

position:3948:-1
position: 3948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5560-5572:-1:exon

position:5560:-1
position: 5560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3948-5281:-1:exon

position:5281:-1
position: 5281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HAdVB1_gp04
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: E2B
locus tag: HAdVB1_gp04
EC number: 2.7.7.7
function: DNA replication
note: pol; genus-common
codon start: 1
product: DNA polymerase
translation: MALVQAHGAGSFHPEASDPGCQPPRRRACESSQGAVPEPTRARRRRTTASHAAGSRAAPAARCAPSTPLLNMQEATEPPPSKMKNKGTVVAPKGHGTLQAIDISTNGPVEIKYYLNLPHALQKIMQVNLLTLPTNLTPQRLRTLDSSGLRALVLELRPCRAEVWTCLPRGLVSMTTIETEDGHADADNIVKREVQAPGLNFPLKFLVKGSQVQLIHKVHPVNRCEYCGRLYKHKHECSARRREFYFHHINSHSSNWWQEIQFFPIGSHPRTERLFLTYDVETYTWMGSFGKQLIPFMLVMKLSGDQRLVNIAYDLAIKLKWDRWRQDPQTFYCVTPEKMAVGQHFRQYRDQLQTALAVDLWSSFLKANPHVHEWALEHYALTDPTDLTFEELKKLPHVRGTPRFLELYIVGHNINGFDEIVLAAQVINNRAEVPQPFKITRNFMPRAGKILFNDVTFALPNPAYKKRVDFQLWEQGACDDIDFKYQFLKVMVRDTFALTHTSLRNAAQAYSLPVEKGCCPYKAVNQFYMLGSYRAEKDGFPLEEYWKDHEEYLLNRELWEKKSQPRYDIIQETLDYCALDVLITAELVAKLQESYAHFIRDSVGLPHAHFNIFQRPTISSNSHAIFRQIVYRAEKPNRTNLGPGLLAPSHELYDYVRASIRGGRCYPTYIGILEEPLYVYDICGMYASALTHPMPWGTPLNPYERALAVREWQMTLDDPATISYFDKDLLPGIFTIDADPPDEFMLDPLPPFCSRKGGRLCWTNEPLRGEVATSVDLITLHNRGWRIRIVPDELTTIFPEWKCVAREYVQLNITAKERADKEKNQTMRSIAKLLSNALYGSFATKLDNKKIVFSDQMDESLMKGISAGTVNIKSSSFLETDNLSAEVMPAFEREYLPQQLALLDSDPEDSEDEQRPAPFYTPPAGTPGHVAYTYKPITFLDVEEGDMCLHTVEKVDPLVDNDRYPSHVASFVLAWTRAFVSEWAGFLYEEDRGTPLEDRPIKSVYGDTDSLFVTQRGHELMETKGKKRIKKHGGKLVFDPDEPDLTWLVECETVCASCGADAYSPESIFLAPKLYALKCIYCPACHKTSKGKLRAKGHAAEALNYELMVNCYLADMQGANRQRFSTSRMSLKRTLASAQPGAHPFTVTETTLTRTLRPWKDRTLAALDAHRLIPYSRSRPNPRNEEVCWIEMP
SIO_010081: HAdVB1_gp04
subclass of: SO_0000673
so part of: HAdVB1_gp04
location: complement(join(5051..8623,13848..13856))
location: region:5051-13856:-1
so has part: feature:13848-13856:-1:exon
so has part: feature:5051-8623:-1:exon

YP_002213831.1
type: Protein
SIO_000068: ncbiprotein

position:5051:-1
position: 5051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13856:-1
position: 13856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13848-13856:-1:exon

position:13848:-1
position: 13848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5051-8623:-1:exon

position:8623:-1
position: 8623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

intron
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
note: IVa2
so part of: sequence
location: complement(5282..5559)
location: region:5282-5559:-1
so has part: feature:5282-5559:-1:region

position:5282:-1
position: 5282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5559:-1
position: 5559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5282-5559:-1:region

HAdVB1_gp06
type: Gene
subclass of: SO_0000704
RO_0002162: 108098
gene: L5
locus tag: HAdVB1_gp06
so part of: sequence
location: 5872..32340
location: region:5872-32340:1
so has part: feature:5872-32340:1:exon
subclass of: SO_0000010

6870519
type: Gene
SIO_000068: ncbigene

position:5872:1
position: 5872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32340:1
position: 32340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5872-32340:1:exon

HAdVB1_gp07
type: Gene
subclass of: SO_0000704
RO_0002162: 108098
gene: L4
locus tag: HAdVB1_gp07
so part of: sequence
location: 5872..27717
location: region:5872-27717:1
so has part: feature:5872-27717:1:exon
subclass of: SO_0000010

6870520
type: Gene
SIO_000068: ncbigene

position:27717:1
position: 27717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5872-27717:1:exon

HAdVB1_gp08
type: Gene
subclass of: SO_0000704
RO_0002162: 108098
gene: L3
locus tag: HAdVB1_gp08
so part of: sequence
location: 5872..21943
location: region:5872-21943:1
so has part: feature:5872-21943:1:exon
subclass of: SO_0000010

6870521
type: Gene
SIO_000068: ncbigene

position:21943:1
position: 21943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5872-21943:1:exon

HAdVB1_gp09
type: Gene
subclass of: SO_0000704
RO_0002162: 108098
gene: L2
locus tag: HAdVB1_gp09
so part of: sequence
location: 5872..17501
location: region:5872-17501:1
so has part: feature:5872-17501:1:exon
subclass of: SO_0000010

6870522
type: Gene
SIO_000068: ncbigene

position:17501:1
position: 17501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5872-17501:1:exon

HAdVB1_gp10
type: Gene
subclass of: SO_0000704
RO_0002162: 108098
gene: L1
locus tag: HAdVB1_gp10
so part of: sequence
location: 5872..13835
location: region:5872-13835:1
so has part: feature:5872-13835:1:exon
subclass of: SO_0000010

6870523
type: Gene
SIO_000068: ncbigene

position:13835:1
position: 13835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5872-13835:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 108098
regulatory class: TATA_box
note: L
so part of: sequence
location: 5872..5877
location: region:5872-5877:1
so has part: feature:5872-5877:1:region

position:5877:1
position: 5877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5872-5877:1:region

intron
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
note: between L1 and L2 leaders
so part of: sequence
location: 5944..6961
location: region:5944-6961:1
so has part: feature:5944-6961:1:region

position:5944:1
position: 5944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6961:1
position: 6961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5944-6961:1:region

intron
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
note: between L2 and L3 leaders
so part of: sequence
location: 7034..9476
location: region:7034-9476:1
so has part: feature:7034-9476:1:region

position:7034:1
position: 7034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9476:1
position: 9476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7034-9476:1:region

HAdVB1_gp10
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: L1
locus tag: HAdVB1_gp10
note: between L2 and i leaders; precedes protein 13.6K CDS
SIO_010081: HAdVB1_gp10
subclass of: SO_0000673
so part of: HAdVB1_gp10
location: 7034..7802
location: region:7034-7802:1
so has part: feature:7034-7802:1:exon

position:7802:1
position: 7802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7034-7802:1:exon

HAdVB1_gp10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: L1
locus tag: HAdVB1_gp10
function: possibly RNA metabolism and transport
note: i-leader protein; similar CDSs are present in some other human mastadenoviruses, but their conservation may merely be a secondary effect of conservation of DNA polymerase encoded on the opposing strand
codon start: 1
product: protein 13.6K
translation: MRANREELDLLPPVGGMAVDVMEVELPATRRAFMLVLVQTAAVLAAIHGMHLMNELYLTSFDEKFQWKIEAWRLYLALYYVVCIGMTIFCLDGGHADEPSREASPDLGAAGAELEDESAQAGAVQGPETLRSQVLRART
SIO_010081: HAdVB1_gp10
subclass of: SO_0000673
so part of: HAdVB1_gp10
location: join(7829..8227,9477..9497)
location: region:7829-9497:1
so has part: feature:7829-8227:1:exon
so has part: feature:9477-9497:1:exon

YP_002213771.1
type: Protein
SIO_000068: ncbiprotein

position:7829:1
position: 7829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9497:1
position: 9497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7829-8227:1:exon

position:8227:1
position: 8227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9477-9497:1:exon

position:9477:1
position: 9477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HAdVB1_gp04
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: E2B
locus tag: HAdVB1_gp04
function: DNA replication
note: covalently attached to genome 5'-termini; genus-common
codon start: 1
product: terminal protein precursor pTP
translation: MALSVNDCARLTGQTVPTMNYFMPLRNIWNRVREFPRASTTASGITWMSRYIYGYHRLMLEDLAPGAPATERWPLYRQPPPHFLIGYQYLVRTCNDYIFDTRAYSRLKYTELVRPGHQTVNWSVMANCSYTINTGAYHRFVDFDDFQATLTQVQQAILAERVVADLALVQPMRGFGITRMHGRAGEEEVPVERLMQDYYKDLARCQDNAWGMAHRLRIQQAGPKDLVLLATIRRLKTAYFNFITSSIVSPSQEEEGEERENPDRASSRPRPQETVLSLPCDCDWLDAFVERFSDPVDLETIRSLRGVPTGQLIKCIISAVSLPNGEPPSHHFREMRGGVFTLRPRENGRAVTETMRRRRGEVIERFIDRLPVRRRRRRVPPPPAAPPEEEEMLVEEEEIEEEIPGAFEREVRTTIAELIRLLEEELTVSARNSQFFNFAVDFYEAMERLEALGDVSEMPLRRWIMYFFVTEHIATTLNYLFQRLCNYAVFTRHVELNLAQVVMRARDPVGAVVYSRVWNEAGMNAFSQLIGRISNDLAATVERAGRGDLQEEEIEQFMAEIAYQDNSGDVQEILRQAAVNDTEIDSVELSFRFKLTGPVAFTQRRQIQDVNRRVVAHASLLRAQYQNLPARGADVPLPAMPPGPEPPLPPGARPRHRF
SIO_010081: HAdVB1_gp04
subclass of: SO_0000673
so part of: HAdVB1_gp04
location: complement(join(8422..10389,13848..13856))
location: region:8422-13856:-1
so has part: feature:13848-13856:-1:exon
so has part: feature:8422-10389:-1:exon

YP_002213832.1
type: Protein
SIO_000068: ncbiprotein

position:8422:-1
position: 8422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13848-13856:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8422-10389:-1:exon

position:10389:-1
position: 10389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HAdVB1_gp04
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: E2B
locus tag: HAdVB1_gp04
SIO_010081: HAdVB1_gp04
subclass of: SO_0000673
so part of: HAdVB1_gp04
location: complement(8624..13847)
location: region:8624-13847:-1
so has part: feature:8624-13847:-1:exon

position:8624:-1
position: 8624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13847:-1
position: 13847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8624-13847:-1:exon

HAdVB1_gp06
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: L5
locus tag: HAdVB1_gp06
note: precedes fiber CDS
SIO_010081: HAdVB1_gp06
subclass of: SO_0000673
so part of: HAdVB1_gp06
location: 9564..31367
location: region:9564-31367:1
so has part: feature:9564-31367:1:exon

position:9564:1
position: 9564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31367:1
position: 31367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9564-31367:1:exon

HAdVB1_gp07
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: L4
locus tag: HAdVB1_gp07
note: precedes capsid protein precursor pVIII CDS
SIO_010081: HAdVB1_gp07
subclass of: SO_0000673
so part of: HAdVB1_gp07
location: 9564..26549
location: region:9564-26549:1
so has part: feature:9564-26549:1:exon

position:26549:1
position: 26549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9564-26549:1:exon

HAdVB1_gp07
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: L4
locus tag: HAdVB1_gp07
note: precedes protein 33K and encapsidation protein 22K CDSs
SIO_010081: HAdVB1_gp07
subclass of: SO_0000673
so part of: HAdVB1_gp07
location: 9564..25774
location: region:9564-25774:1
so has part: feature:9564-25774:1:exon

position:25774:1
position: 25774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9564-25774:1:exon

HAdVB1_gp07
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: L4
locus tag: HAdVB1_gp07
note: precedes hexon assembly protein 100K CDS
SIO_010081: HAdVB1_gp07
subclass of: SO_0000673
so part of: HAdVB1_gp07
location: 9564..23570
location: region:9564-23570:1
so has part: feature:9564-23570:1:exon

position:23570:1
position: 23570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9564-23570:1:exon

HAdVB1_gp08
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: L3
locus tag: HAdVB1_gp08
note: precedes protease CDS
SIO_010081: HAdVB1_gp08
subclass of: SO_0000673
so part of: HAdVB1_gp08
location: 9564..21274
location: region:9564-21274:1
so has part: feature:9564-21274:1:exon

position:21274:1
position: 21274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9564-21274:1:exon

HAdVB1_gp08
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: L3
locus tag: HAdVB1_gp08
note: precedes hexon CDS
SIO_010081: HAdVB1_gp08
subclass of: SO_0000673
so part of: HAdVB1_gp08
location: 9564..18369
location: region:9564-18369:1
so has part: feature:9564-18369:1:exon

position:18369:1
position: 18369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9564-18369:1:exon

HAdVB1_gp08
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: L3
locus tag: HAdVB1_gp08
note: precedes capsid protein precursor pVI CDS
SIO_010081: HAdVB1_gp08
subclass of: SO_0000673
so part of: HAdVB1_gp08
location: 9564..17550
location: region:9564-17550:1
so has part: feature:9564-17550:1:exon

position:17550:1
position: 17550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9564-17550:1:exon

HAdVB1_gp09
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: L2
locus tag: HAdVB1_gp09
note: precedes core protein precursor pX CDS
SIO_010081: HAdVB1_gp09
subclass of: SO_0000673
so part of: HAdVB1_gp09
location: 9564..17247
location: region:9564-17247:1
so has part: feature:9564-17247:1:exon

position:17247:1
position: 17247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9564-17247:1:exon

HAdVB1_gp09
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: L2
locus tag: HAdVB1_gp09
note: precedes core protein V CDS
SIO_010081: HAdVB1_gp09
subclass of: SO_0000673
so part of: HAdVB1_gp09
location: 9564..16163
location: region:9564-16163:1
so has part: feature:9564-16163:1:exon

position:16163:1
position: 16163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9564-16163:1:exon

HAdVB1_gp09
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: L2
locus tag: HAdVB1_gp09
note: precedes core protein precursor pVII CDS
SIO_010081: HAdVB1_gp09
subclass of: SO_0000673
so part of: HAdVB1_gp09
location: 9564..15526
location: region:9564-15526:1
so has part: feature:9564-15526:1:exon

position:15526:1
position: 15526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9564-15526:1:exon

HAdVB1_gp09
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: L2
locus tag: HAdVB1_gp09
note: precedes penton base CDS
SIO_010081: HAdVB1_gp09
subclass of: SO_0000673
so part of: HAdVB1_gp09
location: 9564..13900
location: region:9564-13900:1
so has part: feature:9564-13900:1:exon

position:13900:1
position: 13900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9564-13900:1:exon

HAdVB1_gp10
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: L1
locus tag: HAdVB1_gp10
note: precedes capsid protein precursor pIIIa CDS
SIO_010081: HAdVB1_gp10
subclass of: SO_0000673
so part of: HAdVB1_gp10
location: 9564..12050
location: region:9564-12050:1
so has part: feature:9564-12050:1:exon

position:12050:1
position: 12050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9564-12050:1:exon

HAdVB1_gp10
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: L1
locus tag: HAdVB1_gp10
note: precedes encapsidation protein 52K CDS
SIO_010081: HAdVB1_gp10
subclass of: SO_0000673
so part of: HAdVB1_gp10
location: 9564..10868
location: region:9564-10868:1
so has part: feature:9564-10868:1:exon

position:10868:1
position: 10868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9564-10868:1:exon

HAdVB1_gp04
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: E2B
locus tag: HAdVB1_gp04
SIO_010081: HAdVB1_gp04
subclass of: SO_0000673
so part of: HAdVB1_gp04
location: complement(10390..13847)
location: region:10390-13847:-1
so has part: feature:10390-13847:-1:exon

position:10390:-1
position: 10390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10390-13847:-1:exon

HAdVB1_gs01
type: Gene
subclass of: SO_0000704
RO_0002162: 108098
gene: VAI
locus tag: HAdVB1_gs01
so part of: sequence
location: 10422..10592
location: region:10422-10592:1
so has part: feature:10422-10592:1:exon

6870524
type: Gene
SIO_000068: ncbigene

position:10422:1
position: 10422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10592:1
position: 10592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10422-10592:1:exon

HAdVB1_gs01
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 108098
gene: VAI
locus tag: HAdVB1_gs01
product: virus-associated RNA I
SIO_010081: HAdVB1_gs01
so part of: HAdVB1_gs01
location: 10422..10592
location: region:10422-10592:1
so has part: feature:10422-10592:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10422-10592:1:exon

HAdVB1_gs02
type: Gene
subclass of: SO_0000704
RO_0002162: 108098
gene: VAII
locus tag: HAdVB1_gs02
so part of: sequence
location: 10666..10838
location: region:10666-10838:1
so has part: feature:10666-10838:1:exon

6870525
type: Gene
SIO_000068: ncbigene

position:10666:1
position: 10666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10838:1
position: 10838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10666-10838:1:exon

HAdVB1_gs02
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 108098
gene: VAII
locus tag: HAdVB1_gs02
product: virus-associated RNA II
SIO_010081: HAdVB1_gs02
so part of: HAdVB1_gs02
location: 10666..10838
location: region:10666-10838:1
so has part: feature:10666-10838:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10666-10838:1:exon

HAdVB1_gp10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: L1
locus tag: HAdVB1_gp10
function: DNA encapsidation
function: capsid morphogenesis
note: genus-common
codon start: 1
product: encapsidation protein 52K
translation: MHPVLRQMRPQQQAPSQQQPQKALLAPATTAAAAVSGAGQPAYDLDLEEGEGLARLGAPSPERHPRVQLKKDSREAYVPQQNLFRDRSGEEPEEMRASRFNAGRELRHGLDRRRVLQDEDFEVDEVTGISPARAHVAAANLVSAYEQTVKEERNFQKSFNNHVRTLIAREEVTLGLMHLWDLMEAIAQNPTSKPLTAQLFLVVQHSRDNEAFREALLNITEPDGRWLYDLINILQSIIVQERSLGLAEKVAAINYSVLSLGKYYARKIYKTPYVPIDKEVKIDGFYMRMTLKVLTLSDDLGVYRNDRMHRAVSASRRRELSDRELMHSLQRALTGAGTDGENYFDMGADLQWQPSRRAMEAAGCELPYIEEVDEVEDEEGEYLED
SIO_010081: HAdVB1_gp10
subclass of: SO_0000673
so part of: HAdVB1_gp10
location: 10869..12026
location: region:10869-12026:1
so has part: feature:10869-12026:1:exon

YP_002213772.1
type: Protein
SIO_000068: ncbiprotein

position:10869:1
position: 10869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12026:1
position: 12026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10869-12026:1:exon

HAdVB1_gp10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: L1
locus tag: HAdVB1_gp10
function: capsid morphogenesis
note: genus-common
codon start: 1
product: capsid protein precursor pIIIa
translation: MEQQQAPDPAMRAALQSQPSGINSSDDWTQAMQRIMALTTRNPEAFRQQPQANRLSAILEAVVPSRSNPTHEKVLAIVNALVENKAIRPDEAGLVYNALLERVARYNSSNVQTNLDRMVTDVREAVSQRERFQRDANLGSLVALNAFLSTQPANVPRGQQDYTNFLSALRLMVAEVPQSEVYQSGPDYFFQTSRQGLQTVNLTQAFKNLKGLWGVHAPVGDRATVSSLLTPNSRLLLLLVSPFTDSGSIDRNSYLGYLLNLYREAIGQSQVDEQTYQEITQVSRALGQEDTGSLEATLNFLLTNRSQKIPPQYALTAEEERILRYVQQSVGLFLMQEGATPTAALDMTARNMEPSMYASNRPFINKLLDYLHRAAAMNSDYFTNAILNPHWLPPPGFYTGEYDMPDPNDGFLWDDVDSSIFSPPPGYTVWKKEGGDRRHSSVSLSGTAGAAATVPEAASPFPSLPFSLNSVRSSELGRITRPRLMGEDEYLNDSLLRPEREKNFPNNGIESLVDKMSRWKTYAQDHRDEPRILGATSRPIRRRQRHDRQMGLVWDDEDSADDSSVLDLGGRGGGNPFAHLRPRFGRML
SIO_010081: HAdVB1_gp10
subclass of: SO_0000673
so part of: HAdVB1_gp10
location: 12051..13817
location: region:12051-13817:1
so has part: feature:12051-13817:1:exon

YP_002213773.1
type: Protein
SIO_000068: ncbiprotein

position:12051:1
position: 12051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13817:1
position: 13817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12051-13817:1:exon

HAdVB1_gp10
type: Feature
subclass of: SO_0000001
RO_0002162: 108098
regulatory class: polyA_signal_sequence
gene: L1
locus tag: HAdVB1_gp10
SIO_010081: HAdVB1_gp10
subclass of: SO_0000673
so part of: HAdVB1_gp10
location: 13830..13835
location: region:13830-13835:1
so has part: feature:13830-13835:1:exon

position:13830:1
position: 13830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13830-13835:1:exon

HAdVB1_gp09
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: L2
locus tag: HAdVB1_gp09
function: capsid morphogenesis
function: cell attachment
function: cell entry
note: capsid protein III; genus-common
codon start: 1
product: penton base
translation: MRRRAVLGGAVVYPEGPPPSYESVMQQQAAMIQPPLEAPFVPPRYLAPTEGRNSIRYSELSPLYDTTKLYLVDNKSADIASLNYQNDHSNFLTTVVQNNDFTPTEASTQTINFDERSRWGGQLKTIMHTNMPNVNEYMFSNKFKARVMVSRKAPEGVTVNDTYDHKEDILKYEWFEFILPEGNFSATMTIDLMNNAIIDNYLEIGRQNGVLESDIGVKFDTRNFRLGWDPETKLIMPGVYTYEAFHPDIVLLPGCGVDFTESRLSNLLGIRKRHPFQEGFKIMYEDLEGGNIPALLDVTAYEESKKDTTTETTTLAVAEETSEDDDITRGDTYITEKQKREAAAAEVKKELKIQPLEKDSKSRSYNVLEDKINTAYRSWYLSYNYGNPEKGIRSWTLLTTSDVTCGAEQVYWSLPDMMQDPVTFRSTRQVNNYPVVGAELMPVFSKSFYNEQAVYSQQLRQATSLTHVFNRFPENQILIRPPAPTITTVSENVPALTDHGTLPLRSSIRGVQRVTVTDARRRTCPYVYKALGIVAPRVLSSRTF
SIO_010081: HAdVB1_gp09
subclass of: SO_0000673
so part of: HAdVB1_gp09
location: 13905..15539
location: region:13905-15539:1
so has part: feature:13905-15539:1:exon

YP_002213774.1
type: Protein
SIO_000068: ncbiprotein

position:13905:1
position: 13905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15539:1
position: 15539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13905-15539:1:exon

HAdVB1_gp04
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: E2B
locus tag: HAdVB1_gp04
note: precedes DNA polymerase and terminal protein precursor pTP CDSs
SIO_010081: HAdVB1_gp04
subclass of: SO_0000673
so part of: HAdVB1_gp04
location: complement(14047..26546)
location: region:14047-26546:-1
so has part: feature:14047-26546:-1:exon

position:14047:-1
position: 14047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26546:-1
position: 26546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14047-26546:-1:exon

HAdVB1_gp09
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: L2
locus tag: HAdVB1_gp09
function: capsid morphogenesis
note: genus-common
codon start: 1
product: core protein precursor pVII
translation: MSILISPSNNTGWGLYAPTKMYGGARKRSTQHPVRVRGHFRAPWGALKGRTRTRTTVDDVIDQVVADARNYTPTAPTSTVDAVIDSVVADARAYARRKSRRRRIARRHRATPAMRAAKAILRRAKRVGRRAMLRAARRAASGASSGRSRRRAATAAAAAIANMAQPRRGNVYWVRDATTGQRVPVRTRPPRT
SIO_010081: HAdVB1_gp09
subclass of: SO_0000673
so part of: HAdVB1_gp09
location: 15551..16129
location: region:15551-16129:1
so has part: feature:15551-16129:1:exon

YP_002213775.1
type: Protein
SIO_000068: ncbiprotein

position:15551:1
position: 15551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16129:1
position: 16129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15551-16129:1:exon

HAdVB1_gp09
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: L2
locus tag: HAdVB1_gp09
function: capsid morphogenesis
note: genus-specific
codon start: 1
product: core protein V
translation: MSKRKYKEEMLQVIAPEIYGPPVKDEKKPRKIKRVKNNKKEEDDDDGLVEFVREFAPRRRVQWRGRKVRQVLRPGTTVVFTPGERSSTTFKRSYDEVYGDDDILEQAADRLDEFAYGKRTRSSPKEEAVSIPLDHGNPTPSLKPVTLQQVLPVPARRGVKREGEDLYPTMQLMVPKRQRLEDVLEKMKVDADIQPEVKVRPIKEVAPGLGVQTFDIKIPTESMEVQTEPAKPTTSIEVQTEPWMPAPVAAPSTTRRSRRKYGPASLLMPNYALHPSIIPTPGYRGTRYYRNRSNTSRRRKPPASRTRRRRRRNTASKLTPAALVRRVYRDGRAEPLTLPRARYHPSITT
SIO_010081: HAdVB1_gp09
subclass of: SO_0000673
so part of: HAdVB1_gp09
location: 16172..17221
location: region:16172-17221:1
so has part: feature:16172-17221:1:exon

YP_002213776.1
type: Protein
SIO_000068: ncbiprotein

position:16172:1
position: 16172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17221:1
position: 17221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16172-17221:1:exon

HAdVB1_gp09
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: L2
locus tag: HAdVB1_gp09
function: capsid morphogenesis
note: putative type 2 membrane protein; product Mu; genus-common
codon start: 1
product: core protein precursor pX
translation: MALTCRLRVPITGYRGRNSRRRRMLGRGMRRHRRRRAISRRLGGGFLPALIPIIAAAIGAIPGIASVAVQASQRH
SIO_010081: HAdVB1_gp09
subclass of: SO_0000673
so part of: HAdVB1_gp09
location: 17250..17477
location: region:17250-17477:1
so has part: feature:17250-17477:1:exon

YP_002213777.1
type: Protein
SIO_000068: ncbiprotein

position:17250:1
position: 17250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17477:1
position: 17477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17250-17477:1:exon

HAdVB1_gp09
type: Feature
subclass of: SO_0000001
RO_0002162: 108098
regulatory class: polyA_signal_sequence
gene: L2
locus tag: HAdVB1_gp09
SIO_010081: HAdVB1_gp09
subclass of: SO_0000673
so part of: HAdVB1_gp09
location: 17496..17501
location: region:17496-17501:1
so has part: feature:17496-17501:1:exon

position:17496:1
position: 17496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17496-17501:1:exon

HAdVB1_gp08
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: L3
locus tag: HAdVB1_gp08
function: capsid morphogenesis
note: cleaved peptide stimulates protease; genus-common
codon start: 1
product: capsid protein precursor pVI
translation: MEDINFSSLAPRHGTRPYMGTWSDIGTSQLNGGAFNWSSIWSGLKNFGSTVKTYGNKAWNSSTGQALRNKLKEQNFQQKVVDGIASGINGVVDLANQAVQKQINSRLDPPPATPGEMEVEEELPPLEKRGDKRPRPELEQTLVTRADEPPSYEEAVKLGMPTTRPVAHMATGVMKPSQSHRPATLDLPPPPASAAPVPKPVATRKPTAVQPVAVARPRPGGTPRPKANWQSTLNSIVGLGVQSVKRRRCY
SIO_010081: HAdVB1_gp08
subclass of: SO_0000673
so part of: HAdVB1_gp08
location: 17553..18305
location: region:17553-18305:1
so has part: feature:17553-18305:1:exon

YP_002213778.1
type: Protein
SIO_000068: ncbiprotein

position:17553:1
position: 17553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18305:1
position: 18305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17553-18305:1:exon

HAdVB1_gp08
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: L3
locus tag: HAdVB1_gp08
function: capsid morphogenesis
note: capsid protein II; genus-common
codon start: 1
product: hexon
translation: MATPSMMPQWAYMHIAGQDASEYLSPGLVQFARATDTYFSMGNKFRNPTVAPTHDVTTDRSQRLMLRFVPVDREDNTYSYKVRYTLAVGDNRVLDMASTFFDIRGVLDRGPSFKPYSGTAYNSLAPKGAPNTSQWIVTTNGDNAVTTTTNTFGIASMKGDNITKEGLQIGKDITTTEGEEKPIYADKTYQPEPQVGEESWTDTDGTNEKFGGRALKPATNMKPCYGSFARPTNIKGGQAKNRKVKPTTEGGVETEEPDIDMEFFDGRDAVAGALAPEIVLYTENVNLETPDSHVVYKPETSNNSHANLGQQAMPNRPNYIGFRDNFVGLMYYNSTGNMGVLAGQASQLNAVVDLQDRNTELSYQLLLDSLGDRTRYFSMWNQAVDSYDPDVRIIENHGIEDELPNYCFPLNGIGPGHTYQGIKVKTDDTNGWEKDANVAPANEITIGNNLAMEINIQANLWRSFLYSNVALYLPDVYKYTPPNITLPTNTNTYEYMNGRVVSPSLVDSYINIGARWSLDPMDNVNPFNHHRNAGLRYRSMLLGNGRYVPFHIQVPQKFFAVKNLLLLPGSYTYEWNFRKDVNMVLQSSLGNDLRTDGATISFTSINLYATFFPMAHNTASTLEAMLRNDTNDQSFNDYLSAANMLYPIPANATNIPISIPSRNWAAFRGWSFTRLKTKETPSLGSGFDPYFVYSGSIPYLDGTFYLNHTFKKVSIMFDSSVSWPGNDRLLSPNEFEIKRTVDGEGYNVAQCNMTKDWFLVQMLANYNIGYQGFYIPEGYKDRMYSFFRNFQPMSRQVVDEVNYTDYKAVTLPYQHNNSGFVGYLAPTMRQGEPYPANYPYPLIGTTAVKSVTQKKFLCDRTMWRIPFSSNFMSMGALTDLGQNMLYANSAHALDMTFEVDPMDEPTLLYLLFEVFDVVRVHQPHRGVIEAVYLRTPFSAGNATT
SIO_010081: HAdVB1_gp08
subclass of: SO_0000673
so part of: HAdVB1_gp08
location: 18418..21252
location: region:18418-21252:1
so has part: feature:18418-21252:1:exon

YP_002213779.1
type: Protein
SIO_000068: ncbiprotein

position:18418:1
position: 18418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21252:1
position: 21252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18418-21252:1:exon

HAdVB1_gp08
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: L3
locus tag: HAdVB1_gp08
EC number: 3.4.22.39
function: capsid morphogenesis
note: capsid protein 23K; genus-common
codon start: 1
product: protease
translation: MTCGSGNGSSEQELKAIVRDLGCGPYFLGTFDKRFPGFMAPDKLACAIVNTAGRETGGEHWLAFGWNPRYNTCYLFDPFGFSDERLKQIYQFEYEGLLRRSALATKDRCITLEKSTQSVQGPRSAACGLFCCMFLHAFVHWPDRPMDGNPTMKLLTGVSNSMLQSPQVQPTLRRNQEVLYRFLNTHSSYFRSHRARIERATAFDRMDMQ
SIO_010081: HAdVB1_gp08
subclass of: SO_0000673
so part of: HAdVB1_gp08
location: 21289..21918
location: region:21289-21918:1
so has part: feature:21289-21918:1:exon

YP_002213780.1
type: Protein
SIO_000068: ncbiprotein

position:21289:1
position: 21289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21918:1
position: 21918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21289-21918:1:exon

HAdVB1_gp08
type: Feature
subclass of: SO_0000001
RO_0002162: 108098
regulatory class: polyA_signal_sequence
gene: L3
locus tag: HAdVB1_gp08
SIO_010081: HAdVB1_gp08
subclass of: SO_0000673
so part of: HAdVB1_gp08
location: 21938..21943
location: region:21938-21943:1
so has part: feature:21938-21943:1:exon

position:21938:1
position: 21938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21938-21943:1:exon

HAdVB1_gp11
type: Gene
subclass of: SO_0000704
RO_0002162: 108098
gene: E2A
locus tag: HAdVB1_gp11
so part of: sequence
location: complement(21950..26643)
location: region:21950-26643:-1
so has part: feature:21950-26643:-1:exon
subclass of: SO_0000010

6870526
type: Gene
SIO_000068: ncbigene

position:21950:-1
position: 21950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21950-26643:-1:exon

HAdVB1_gp12
type: Gene
subclass of: SO_0000704
RO_0002162: 108098
gene: E2A-L
locus tag: HAdVB1_gp12
so part of: sequence
location: complement(21950..25561)
location: region:21950-25561:-1
so has part: feature:21950-25561:-1:exon

6870527
type: Gene
SIO_000068: ncbigene

position:25561:-1
position: 25561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21950-25561:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 108098
regulatory class: polyA_signal_sequence
note: E2A, E2A-L
so part of: sequence
location: complement(21950..21955)
location: region:21950-21955:-1
so has part: feature:21950-21955:-1:region

position:21955:-1
position: 21955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21950-21955:-1:region

HAdVB1_gp11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: E2A
locus tag: HAdVB1_gp11
function: DNA replication
note: DBP; genus-common; DBP family
codon start: 1
product: single-stranded DNA-binding protein
translation: MASRGGNQSSDRHREHTPERGMSSASHPPPRPDRSPSQSPPPLPPKRNTYRRVGSGSSTESQVVLVSETSQSSLSPERSNSPPPIPPKKKPRKTKHVPLQDISQDSEEEREQAQLVAVGFSYPPVRIIEKDGKRSVEKIDKNDPIAKGATFIAVRNPLSLPLVSAWEKGMEVMAVLMERYRLDNDLRTSFKLMPEQHEQYKRICHQYVNEEHRGIPLTFTSMKTLTTMMGRFMQGLVHYYSEIAHNNWECTGCALWAHGCTDYEGKVKCLHGTIMIQKDHIIEMDVASENGQRAMKENPDRAKITQNRWGRNVVQLANNDARCCVNDANCTTNQFSSKSCGMFYTEGSKAQEAFKQYEAFMKAVYPGITPDQARMMLIPIHCDCNHKPGCAPVMGRQTCKMTPFGMANAEDLDVTTISDPTVLASVRHPALIVFQCCNPVYRNSRVQNAGPNCDFKISAPDLLGAMQLTRKLWQDTFPEIPVPKLVIPEFKWQNRLQFRNVSLPAGHSDSRQNPFDF
SIO_010081: HAdVB1_gp11
subclass of: SO_0000673
so part of: HAdVB1_gp11
location: complement(22004..23557)
location: region:22004-23557:-1
so has part: feature:22004-23557:-1:exon

YP_002213833.1
type: Protein
SIO_000068: ncbiprotein

position:22004:-1
position: 22004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23557:-1
position: 23557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22004-23557:-1:exon

intron
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
note: E2A, E2A-L; precedes single-stranded DNA-binding protein CDS
so part of: sequence
location: complement(23567..24278)
location: region:23567-24278:-1
so has part: feature:23567-24278:-1:region

position:23567:-1
position: 23567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24278:-1
position: 24278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23567-24278:-1:region

HAdVB1_gp07
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: L4
locus tag: HAdVB1_gp07
function: capsid morphogenesis
function: translational regulation
note: genus-common
codon start: 1
product: hexon assembly protein 100K
translation: METQPSLPTSLQAPSHLAPSSDEEESLTTPPPSPATTTSTLDDEEEVDAAQEMQAQDNVKTEEIEADVEQDPGYVTPAEHQEELKRFLDREDDDRPEHQADGVYQEAGIRDHVADYLTGLGGEDVLLKHLARQSIIVKDALLDLTEVPISVEELSRAYELNLFSPQVPPKRQPNGTCEANPRLNFYPAFTIPEVLATYHIFFKNQKIPVSCRANRTRADALLNLGPGARLPDIASLEEVPKIFEGLGSDETRAANALQQGENDMDEHHSALVELEGDNARIAVLKRSIVVTHFAYPAVNLPPKVMSAVMDHLLIKRARPLSENQNMQDPDASDEGKPVVSDEQLSRWLGTNSPRDLEERRKLMMAVVLVTVELECLRRFFTDPETLRKLEENLHYTFRHGFVRQACKISNVELTNLVSYMGILHENRLGQSVLHTTLKGEARRDYIRDCVYLYLCHTWQTGMGVWQQCLEEQNLKELDKLLQRSLKALWTGFDERTVASDLADIIFPERLRVTLRNGLPDFMSQSMLNNFRSFILERSGILPATCCALPSDFVPLTYRECPPPLWSHCYLFRLANYLSYHSDVIEDVSGDGLLECHCRCNLCTPHRSLACNPQLLSETQIIGTFELQGPRSKGEGSSPGQSLKLTPGLWTSAYLRKFHPEDYHPYEIRFYEDQSHPPKVELSACVITQGAILAQLQAIQKSRQEFLLKKGNGVYLDPQTGEELNTRFPQDVPSPRKQEVEGAAVAPRGYEGRLGQSGRGGDGRLGQPGRGGGQPGGRQFGGGRRGGRGGGRSNRRQTVVIGGGDKQVPRQQHGYHLRSGSGGPAAAQQ
SIO_010081: HAdVB1_gp07
subclass of: SO_0000673
so part of: HAdVB1_gp07
location: 23588..26074
location: region:23588-26074:1
so has part: feature:23588-26074:1:exon

YP_002213782.1
type: Protein
SIO_000068: ncbiprotein

position:23588:1
position: 23588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26074:1
position: 26074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23588-26074:1:exon

intron
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
note: E2A, E2B
so part of: sequence
location: complement(24356..26546)
location: region:24356-26546:-1
so has part: feature:24356-26546:-1:region

position:24356:-1
position: 24356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24356-26546:-1:region

HAdVB1_gp12
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: E2A-L
locus tag: HAdVB1_gp12
SIO_010081: HAdVB1_gp12
subclass of: SO_0000673
so part of: HAdVB1_gp12
location: complement(24356..25455)
location: region:24356-25455:-1
so has part: feature:24356-25455:-1:exon

position:25455:-1
position: 25455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24356-25455:-1:exon

HAdVB1_gp12
type: Feature
subclass of: SO_0000001
RO_0002162: 108098
regulatory class: TATA_box
gene: E2A-L
locus tag: HAdVB1_gp12
SIO_010081: HAdVB1_gp12
subclass of: SO_0000673
so part of: HAdVB1_gp12
location: complement(25556..25561)
location: region:25556-25561:-1
so has part: feature:25556-25561:-1:exon

position:25556:-1
position: 25556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25556-25561:-1:exon

HAdVB1_gp07
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: L4
locus tag: HAdVB1_gp07
function: RNA splicing
note: genus-common
codon start: 1
product: protein 33K
translation: MSHRRGSKKLKVQLSPPEDMKEDWDSQAEEEMEDWDSQAEEVDSLEEDSLEEEDEEAEEVEEATAAKQLSSAAETSKSPDSSTATISAPGRGAQRRPNSRWDETGRFPNPTTASKTAPTAVSKSRQPRQKNTAATTVTRKPAVRKSTTSAPGGGLRITANEPAQTRELRNRIFPTLYAIFQQSRGQEQELKVKNRSLRSLTRSCLYHKSEDQLQRTLEDAEALFNKYCALTLKE
SIO_010081: HAdVB1_gp07
subclass of: SO_0000673
so part of: HAdVB1_gp07
location: join(25776..26124,26294..26649)
location: region:25776-26649:1
so has part: feature:25776-26124:1:exon
so has part: feature:26294-26649:1:exon

YP_002213783.1
type: Protein
SIO_000068: ncbiprotein

position:25776:1
position: 25776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26649:1
position: 26649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25776-26124:1:exon

position:26124:1
position: 26124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26294-26649:1:exon

position:26294:1
position: 26294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HAdVB1_gp07
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: L4
locus tag: HAdVB1_gp07
function: DNA encapsidation
function: capsid morphogenesis
function: transcriptional control
note: genus-common
codon start: 1
product: encapsidation protein 22K
translation: MSHRRGSKKLKVQLSPPEDMKEDWDSQAEEEMEDWDSQAEEVDSLEEDSLEEEDEEAEEVEEATAAKQLSSAAETSKSPDSSTATISAPGRGAQRRPNSRWDETGRFPNPTTASKTGKKERQGYKSWRGHKNAIISCLHECGGNISFTRRYLLFHHGVNFPRNILHYYRHLHSPYCSQQVPATPTEKYSSDNGDQKTSS
SIO_010081: HAdVB1_gp07
subclass of: SO_0000673
so part of: HAdVB1_gp07
location: 25776..26375
location: region:25776-26375:1
so has part: feature:25776-26375:1:exon

YP_002213784.1
type: Protein
SIO_000068: ncbiprotein

position:26375:1
position: 26375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25776-26375:1:exon

HAdVB1_gp07
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: L4
locus tag: HAdVB1_gp07
SIO_010081: HAdVB1_gp07
subclass of: SO_0000673
so part of: HAdVB1_gp07
location: 26125..26293
location: region:26125-26293:1
so has part: feature:26125-26293:1:exon

position:26125:1
position: 26125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26293:1
position: 26293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26125-26293:1:exon

HAdVB1_gp11
type: Feature
subclass of: SO_0000001
RO_0002162: 108098
regulatory class: TATA_box
gene: E2A
locus tag: HAdVB1_gp11
note: E2A, E2B; nominal
SIO_010081: HAdVB1_gp11
subclass of: SO_0000673
so part of: HAdVB1_gp11
location: complement(26638..26643)
location: region:26638-26643:-1
so has part: feature:26638-26643:-1:exon

position:26638:-1
position: 26638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26638-26643:-1:exon

HAdVB1_gp07
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: L4
locus tag: HAdVB1_gp07
function: capsid morphogenesis
note: genus-common
codon start: 1
product: capsid protein precursor pVIII
translation: MSKEIPTPYMWSYQPQMGLAAGASQDYSTRMNWLSAGPSMISRVNDIRAYRNQLLLEQSALTTTPRQHLNPRNWPATLVYQENPAPTTVLLPRDAQAEVQMTNAGVQLAGGSALCRHRPQQSIKRLVIRGRGIQLNDESVSSSLGLRPDGVFQIAGCGRSSFTPRQAVLTLESSSSQPRSGGIGTLQFVEEFTPSVYFNPFSGSPGQYPDEFIPNFDAISESVDGYD
SIO_010081: HAdVB1_gp07
subclass of: SO_0000673
so part of: HAdVB1_gp07
location: 26720..27403
location: region:26720-27403:1
so has part: feature:26720-27403:1:exon

YP_002213785.1
type: Protein
SIO_000068: ncbiprotein

position:26720:1
position: 26720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27403:1
position: 27403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26720-27403:1:exon

HAdVB1_gp13
type: Gene
subclass of: SO_0000704
RO_0002162: 108098
gene: E3
locus tag: HAdVB1_gp13
so part of: sequence
location: 27085..31186
location: region:27085-31186:1
so has part: feature:27085-31186:1:exon
subclass of: SO_0000010

6870528
type: Gene
SIO_000068: ncbigene

position:27085:1
position: 27085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31186:1
position: 31186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27085-31186:1:exon

HAdVB1_gp13
type: Feature
subclass of: SO_0000001
RO_0002162: 108098
regulatory class: TATA_box
gene: E3
locus tag: HAdVB1_gp13
SIO_010081: HAdVB1_gp13
subclass of: SO_0000673
so part of: HAdVB1_gp13
location: 27085..27090
location: region:27085-27090:1
so has part: feature:27085-27090:1:exon

position:27090:1
position: 27090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27085-27090:1:exon

HAdVB1_gp13
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: E3
locus tag: HAdVB1_gp13
note: precedes control protein E3 14.7K CDS
SIO_010081: HAdVB1_gp13
subclass of: SO_0000673
so part of: HAdVB1_gp13
location: 27137..30714
location: region:27137-30714:1
so has part: feature:27137-30714:1:exon

position:27137:1
position: 27137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30714:1
position: 30714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27137-30714:1:exon

HAdVB1_gp13
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: E3
locus tag: HAdVB1_gp13
note: precedes membrane protein E3 RID-beta CDS
SIO_010081: HAdVB1_gp13
subclass of: SO_0000673
so part of: HAdVB1_gp13
location: 27137..30326
location: region:27137-30326:1
so has part: feature:27137-30326:1:exon

position:30326:1
position: 30326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27137-30326:1:exon

HAdVB1_gp13
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: E3
locus tag: HAdVB1_gp13
note: precedes membrane protein E3 RID-alpha CDS
SIO_010081: HAdVB1_gp13
subclass of: SO_0000673
so part of: HAdVB1_gp13
location: 27137..30043
location: region:27137-30043:1
so has part: feature:27137-30043:1:exon

position:30043:1
position: 30043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27137-30043:1:exon

HAdVB1_gp13
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: E3
locus tag: HAdVB1_gp13
note: precedes membrane glycoprotein E3 CR1-delta CDS
SIO_010081: HAdVB1_gp13
subclass of: SO_0000673
so part of: HAdVB1_gp13
location: 27137..29781
location: region:27137-29781:1
so has part: feature:27137-29781:1:exon

position:29781:1
position: 29781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27137-29781:1:exon

HAdVB1_gp13
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: E3
locus tag: HAdVB1_gp13
note: precedes membrane glycoprotein E3 CR1-gamma CDS
SIO_010081: HAdVB1_gp13
subclass of: SO_0000673
so part of: HAdVB1_gp13
location: 27137..29201
location: region:27137-29201:1
so has part: feature:27137-29201:1:exon

position:29201:1
position: 29201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27137-29201:1:exon

HAdVB1_gp13
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: E3
locus tag: HAdVB1_gp13
note: precedes membrane glycoprotein E3 CR1-beta CDS
SIO_010081: HAdVB1_gp13
subclass of: SO_0000673
so part of: HAdVB1_gp13
location: 27137..28648
location: region:27137-28648:1
so has part: feature:27137-28648:1:exon

position:28648:1
position: 28648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27137-28648:1:exon

HAdVB1_gp13
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: E3
locus tag: HAdVB1_gp13
note: precedes membrane glycoprotein E3 gp19K CDS
SIO_010081: HAdVB1_gp13
subclass of: SO_0000673
so part of: HAdVB1_gp13
location: 27137..28076
location: region:27137-28076:1
so has part: feature:27137-28076:1:exon

position:28076:1
position: 28076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27137-28076:1:exon

HAdVB1_gp13
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: E3
locus tag: HAdVB1_gp13
note: precedes membrane glycoprotein E3 CR1-alpha CDS
SIO_010081: HAdVB1_gp13
subclass of: SO_0000673
so part of: HAdVB1_gp13
location: 27137..27600
location: region:27137-27600:1
so has part: feature:27137-27600:1:exon

position:27600:1
position: 27600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27137-27600:1:exon

HAdVB1_gp13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: E3
locus tag: HAdVB1_gp13
function: unknown
note: genus-specific; 12.5K family
codon start: 1
product: control protein E3 12.5K
translation: MSNGGAAELARLRHLDHCRRFRCFARELTEFIYFELSEEHPQGPAHGVRITIEGGIDSRLHRIFSQRPVLIERDQGNTTISIYCICNHPGLHESLCCLVCAEFNKN
SIO_010081: HAdVB1_gp13
subclass of: SO_0000673
so part of: HAdVB1_gp13
location: 27403..27723
location: region:27403-27723:1
so has part: feature:27403-27723:1:exon

YP_002213786.1
type: Protein
SIO_000068: ncbiprotein

position:27723:1
position: 27723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27403-27723:1:exon

HAdVB1_gp13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: E3
locus tag: HAdVB1_gp13
function: unknown
note: 0 CR1 domains; genus-specific; MP family
codon start: 1
product: membrane glycoprotein E3 CR1-alpha
translation: MKAFAVLFVLSLIKTELRPSYGLPLLQSGLYNTNQIFQKTQTLPPFIQDSNSTLPAPSTTNLPETNKLASHLQHRLSRSLLSANTTTPKTGGELRGLPTDDPWVVAGFVTLGVVAGGLVLILCYLYTPCCAYLVILCCWFKKWGPY
SIO_010081: HAdVB1_gp13
subclass of: SO_0000673
so part of: HAdVB1_gp13
location: 27677..28117
location: region:27677-28117:1
so has part: feature:27677-28117:1:exon

YP_002213787.1
type: Protein
SIO_000068: ncbiprotein

position:27677:1
position: 27677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28117:1
position: 28117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27677-28117:1:exon

HAdVB1_gp07
type: Feature
subclass of: SO_0000001
RO_0002162: 108098
regulatory class: polyA_signal_sequence
gene: L4
locus tag: HAdVB1_gp07
SIO_010081: HAdVB1_gp07
subclass of: SO_0000673
so part of: HAdVB1_gp07
location: 27712..27717
location: region:27712-27717:1
so has part: feature:27712-27717:1:exon

position:27712:1
position: 27712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27712-27717:1:exon

HAdVB1_gp13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: E3
locus tag: HAdVB1_gp13
function: immune regulation
note: binds to MHC-I and inhibits transport; genus-specific; MP family
codon start: 1
product: membrane glycoprotein E3 gp19K
translation: MGAILVVLALLSLLGLGSANLNPLDHDPCLDFDPENCTLTFAPDTSRLCGVLIKCGWDCRSVEITHNNKTWNNTLSTTWEPGVPQWYTVSVRGPDGSIRISNNTFIFSEMCDLAMFMSRQYDLWPPSKENIVAFSIAYCLVTCIITAIICVCIHLLIVIRPRQSNEEKEKMP
SIO_010081: HAdVB1_gp13
subclass of: SO_0000673
so part of: HAdVB1_gp13
location: 28102..28620
location: region:28102-28620:1
so has part: feature:28102-28620:1:exon

YP_002213788.1
type: Protein
SIO_000068: ncbiprotein

position:28102:1
position: 28102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28620:1
position: 28620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28102-28620:1:exon

HAdVB1_gp13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: E3
locus tag: HAdVB1_gp13
function: unknown
note: 1 CR1 domain; genus-specific; MP family
codon start: 1
product: membrane glycoprotein E3 CR1-beta
translation: MASVTALIIASIVTVAHGQTIVHITLGHNHTLVGPPITSEVIWTKLGSVDYFDIICNKTKPIFVICNRQNLTLINVSKIYNGYYYGYDRSSSQYKNYLVRITQPKLTVPTMTIIKMANKALENFTSPTTPNEKNIPNSMIAIIAAVALGMALIIICMLLYACYYKKFQHKQDPLLNFNI
SIO_010081: HAdVB1_gp13
subclass of: SO_0000673
so part of: HAdVB1_gp13
location: 28650..29189
location: region:28650-29189:1
so has part: feature:28650-29189:1:exon

YP_002213789.1
type: Protein
SIO_000068: ncbiprotein

position:28650:1
position: 28650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29189:1
position: 29189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28650-29189:1:exon

HAdVB1_gp13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: E3
locus tag: HAdVB1_gp13
function: unknown
note: 1 CR1 domain; genus-specific; MP family
codon start: 1
product: membrane glycoprotein E3 CR1-gamma
translation: MISTTIFIITSLAAVTYGRSHLTVPVGSTCTLQGPQEGYVTWWRIYDNGGFARPCDQPGTKFSCNGRDLTIINITSNEQGFYYGTNYKNSLDYNIIVVPATTSAPRKSTFSSSSAKASTIPKTASAMLKLPKIALSNSTAAPNTIPKSTIGIITAVVVGLMIIFLCIMYYACCYRKHEQKGDALLNFDI
SIO_010081: HAdVB1_gp13
subclass of: SO_0000673
so part of: HAdVB1_gp13
location: 29202..29771
location: region:29202-29771:1
so has part: feature:29202-29771:1:exon

YP_002213790.1
type: Protein
SIO_000068: ncbiprotein

position:29202:1
position: 29202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29771:1
position: 29771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29202-29771:1:exon

HAdVB1_gp13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: E3
locus tag: HAdVB1_gp13
function: unknown
note: 0 CR1 domains; MP family
codon start: 1
product: membrane protein E3 CR1-delta
translation: MILFQSNTTTSYAYTNIQPKYAMQLEITILIVIGILILSVILYFIFCRQIPNVHRNSKRRPIYSPMISRPHMALNEI
SIO_010081: HAdVB1_gp13
subclass of: SO_0000673
so part of: HAdVB1_gp13
location: 29786..30019
location: region:29786-30019:1
so has part: feature:29786-30019:1:exon

YP_002213791.1
type: Protein
SIO_000068: ncbiprotein

position:29786:1
position: 29786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30019:1
position: 30019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29786-30019:1:exon

HAdVB1_gp13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: E3
locus tag: HAdVB1_gp13
function: apoptosis
note: genus-specific; MP family
codon start: 1
product: membrane protein E3 RID-alpha
translation: MIPRNFFFTILICAFNVCATFTAVATASPDCIGPFASYALFAFVTCICVCSIVCLVINFFQLVDWIFVRIAYLRHHPEYRNQNVAALLRLI
SIO_010081: HAdVB1_gp13
subclass of: SO_0000673
so part of: HAdVB1_gp13
location: 30061..30336
location: region:30061-30336:1
so has part: feature:30061-30336:1:exon

YP_002213792.1
type: Protein
SIO_000068: ncbiprotein

position:30061:1
position: 30061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30336:1
position: 30336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30061-30336:1:exon

HAdVB1_gp13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: E3
locus tag: HAdVB1_gp13
function: apoptosis
note: genus-specific; MP family
codon start: 1
product: membrane protein E3 RID-beta
translation: MQAMLPVILILLLPCIPLASTATRATPEQLRKCKFQQPWSFLDCYHEKSDFPTYWIVIVGIINILSCTFFSITIYPTFNFGWNSPNALGYPQEPDEHIPLQHIQQPLALVQYENEPQPSLPPAISYFNLTGGDD
SIO_010081: HAdVB1_gp13
subclass of: SO_0000673
so part of: HAdVB1_gp13
location: 30341..30745
location: region:30341-30745:1
so has part: feature:30341-30745:1:exon

YP_002213793.1
type: Protein
SIO_000068: ncbiprotein

position:30341:1
position: 30341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30745:1
position: 30745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30341-30745:1:exon

HAdVB1_gp13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: E3
locus tag: HAdVB1_gp13
function: apoptosis
note: genus-specific; 12.5K family
codon start: 1
product: control protein E3 14.7K
translation: MTDPIATSSTAAKELLDMDGRASEQRLIQLRIRQQQERAVKELRDAIGIHQCKKGIFCLVKQSKISYEITATDHRLSYELGPQRQKFTCMVGINPIVITQQSGDTKGCIQCSCDSTECIYTLLKTLCGLRDLLPMN
SIO_010081: HAdVB1_gp13
subclass of: SO_0000673
so part of: HAdVB1_gp13
location: 30738..31148
location: region:30738-31148:1
so has part: feature:30738-31148:1:exon

YP_002213794.1
type: Protein
SIO_000068: ncbiprotein

position:30738:1
position: 30738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31148:1
position: 31148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30738-31148:1:exon

HAdVB1_gp13
type: Feature
subclass of: SO_0000001
RO_0002162: 108098
regulatory class: polyA_signal_sequence
gene: E3
locus tag: HAdVB1_gp13
SIO_010081: HAdVB1_gp13
subclass of: SO_0000673
so part of: HAdVB1_gp13
location: 31181..31186
location: region:31181-31186:1
so has part: feature:31181-31186:1:exon

position:31181:1
position: 31181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31181-31186:1:exon

HAdVB1_gp14
type: Gene
subclass of: SO_0000704
RO_0002162: 108098
gene: U
locus tag: HAdVB1_gp14
so part of: sequence
location: complement(<31196..31353)
location: region:31196-31353:-1
so has part: feature:31196-31353:-1:exon
subclass of: SO_0000010

6870529
type: Gene
SIO_000068: ncbigene

position:31196:-1
position: 31196
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:31353:-1
position: 31353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31196-31353:-1:exon

HAdVB1_gp14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: U
locus tag: HAdVB1_gp14
function: unknown
note: exon encoding C terminus unidentified; genus-common
codon start: 1
product: protein U
translation: MKIVGKEEEIKFDIPFKVWRKYATLRRLEYQSWEEGEVLLVESFDKDCIADF
SIO_010081: HAdVB1_gp14
subclass of: SO_0000673
so part of: HAdVB1_gp14
location: complement(<31196..31353)
location: region:31196-31353:-1
so has part: feature:31196-31353:-1:exon

YP_002213834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31196-31353:-1:exon

HAdVB1_gp06
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: L5
locus tag: HAdVB1_gp06
function: cell attachment
note: capsid protein IV; genus-common; fiber family
codon start: 1
product: fiber
translation: MAKRARLSTSFNPVYPYEDESSSQHPFINPGFISPDGFTQSPNGVLSLKCVNPLTTASGSLQLKVGSGLTVDTTDGSLEENIKVNTPLTKSNHSINLPIGNGLQIEQNKLCSKLGNGLTFDSSNSIALKNNTLWTGPKPEANCIIEYGKQNPDSKLTLILVKNGGIVNGYVTLMGASDYVNTLFKNKNVSINVELYFDATGHILPDSSSLKTDLELKYKQTADFSARGFMPSTTAYPFVLPNAGTHNENYIFGQCYYKASDGALFPLEVTVMLNKRLPDSRTSYVMTFLWSLNAGLAPETTQATLITSPFTFSYIREDD
SIO_010081: HAdVB1_gp06
subclass of: SO_0000673
so part of: HAdVB1_gp06
location: 31368..32327
location: region:31368-32327:1
so has part: feature:31368-32327:1:exon

YP_002213796.1
type: Protein
SIO_000068: ncbiprotein

position:31368:1
position: 31368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32327:1
position: 32327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31368-32327:1:exon

HAdVB1_gp06
type: Feature
subclass of: SO_0000001
RO_0002162: 108098
regulatory class: polyA_signal_sequence
gene: L5
locus tag: HAdVB1_gp06
SIO_010081: HAdVB1_gp06
subclass of: SO_0000673
so part of: HAdVB1_gp06
location: 32335..32340
location: region:32335-32340:1
so has part: feature:32335-32340:1:exon

position:32335:1
position: 32335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32335-32340:1:exon

HAdVB1_gp15
type: Gene
subclass of: SO_0000704
RO_0002162: 108098
gene: E4
locus tag: HAdVB1_gp15
so part of: sequence
location: complement(32352..35040)
location: region:32352-35040:-1
so has part: feature:32352-35040:-1:exon
subclass of: SO_0000010

6870530
type: Gene
SIO_000068: ncbigene

position:32352:-1
position: 32352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35040:-1
position: 35040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32352-35040:-1:exon

HAdVB1_gp15
type: Feature
subclass of: SO_0000001
RO_0002162: 108098
regulatory class: polyA_signal_sequence
gene: E4
locus tag: HAdVB1_gp15
SIO_010081: HAdVB1_gp15
subclass of: SO_0000673
so part of: HAdVB1_gp15
location: complement(32352..32357)
location: region:32352-32357:-1
so has part: feature:32352-32357:-1:exon

position:32357:-1
position: 32357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32352-32357:-1:exon

HAdVB1_gp15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: E4
locus tag: HAdVB1_gp15
function: gene regulation
function: cell cycle regulation
note: genus-specific
codon start: 1
product: control protein E4orf6/7
translation: MSGSNSIMTRLRARSTSCARHHPYTRAQLPRCEENETRASMTEDHPLLPDCDTMTMHSMTVIQTPESHPQQLDCESALKDYPDAFLCITDPRLARSETVWNVESKTMSISNGIQMFKAVRGERLVYSVKWEGGGKITTRIL
SIO_010081: HAdVB1_gp15
subclass of: SO_0000673
so part of: HAdVB1_gp15
location: complement(join(32368..32619,33342..33515))
location: region:32368-33515:-1
so has part: feature:33342-33515:-1:exon
so has part: feature:32368-32619:-1:exon

YP_002213835.1
type: Protein
SIO_000068: ncbiprotein

position:32368:-1
position: 32368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33515:-1
position: 33515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33342-33515:-1:exon

position:33342:-1
position: 33342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:32368-32619:-1:exon

position:32619:-1
position: 32619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HAdVB1_gp15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: E4
locus tag: HAdVB1_gp15
function: apoptosis
function: DNA damage response
function: RNA metabolism and transport
function: transformation
note: E4orf6; genus-specific; 34K family
codon start: 1
product: control protein E4 34K
translation: MSGSNSIMTRLRARSTSCARHHPYTRAQLPRCEENETRASMTEDHPLLPDCDTMTMHSVSCVRGLPCSASFTVLQEFPIPWDMFLNPEELKIMRRCMHLCLCCATIDIFQSQVIHGRENWVLHCHCNQQGSLQCMAGGAVLAVWFRKVILGCMINQRCPWYRQIVNMHMPKEIMYVGSVFLRERHLIYIKLWYDGHAGAIISDMSFGWSAFNYGLLNNIVIMCCTYCSNLSEIRMRCCAHRTRKLMLRAIKIMLQDTADPDPINSSRTERRRQRLLVGLMRHNRPIPFSDYDSHRSSSR
SIO_010081: HAdVB1_gp15
subclass of: SO_0000673
so part of: HAdVB1_gp15
location: complement(32616..33515)
location: region:32616-33515:-1
so has part: feature:32616-33515:-1:exon

YP_002213836.1
type: Protein
SIO_000068: ncbiprotein

position:32616:-1
position: 32616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32616-33515:-1:exon

HAdVB1_gp15
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: E4
locus tag: HAdVB1_gp15
SIO_010081: HAdVB1_gp15
subclass of: SO_0000673
so part of: HAdVB1_gp15
location: complement(32620..33341)
location: region:32620-33341:-1
so has part: feature:32620-33341:-1:exon

position:32620:-1
position: 32620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33341:-1
position: 33341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32620-33341:-1:exon

HAdVB1_gp15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: E4
locus tag: HAdVB1_gp15
function: RNA splicing
note: genus-specific
codon start: 1
product: control protein E4orf4
translation: MILPSLPSPLLLETQSSCIAWLGFAYATVDDFLRTIKYDGVLITTEASILLTNLRVWLYLNYQTEHTKRQDRRRRRVCCARAAFCYTKYENVRKQLHYDKVARTLHIMRQTSPLHQSPITTM
SIO_010081: HAdVB1_gp15
subclass of: SO_0000673
so part of: HAdVB1_gp15
location: complement(33418..33786)
location: region:33418-33786:-1
so has part: feature:33418-33786:-1:exon

YP_002213837.1
type: Protein
SIO_000068: ncbiprotein

position:33418:-1
position: 33418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33786:-1
position: 33786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33418-33786:-1:exon

HAdVB1_gp15
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: E4
locus tag: HAdVB1_gp15
note: precedes control protein E4 34K CDS
SIO_010081: HAdVB1_gp15
subclass of: SO_0000673
so part of: HAdVB1_gp15
location: complement(33545..34960)
location: region:33545-34960:-1
so has part: feature:33545-34960:-1:exon

position:33545:-1
position: 33545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34960:-1
position: 34960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33545-34960:-1:exon

HAdVB1_gp15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: E4
locus tag: HAdVB1_gp15
function: DNA damage response
function: transformation
note: genus-specific
codon start: 1
product: control protein E4orf3
translation: MRVCLRMVVEGALRDLFVMCGLDLPQELTRIIQGWKAENYLGMVQECNMMFEELENAPSFGILLFLDVRVEALLEATVEHLENRISFDLAVLFHQHSGGDRCHLRDLQFEVLRDRLE
SIO_010081: HAdVB1_gp15
subclass of: SO_0000673
so part of: HAdVB1_gp15
location: complement(33795..34148)
location: region:33795-34148:-1
so has part: feature:33795-34148:-1:exon

YP_002213838.1
type: Protein
SIO_000068: ncbiprotein

position:33795:-1
position: 33795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34148:-1
position: 34148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33795-34148:-1:exon

HAdVB1_gp15
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: E4
locus tag: HAdVB1_gp15
note: precedes control protein E4orf4 CDS
SIO_010081: HAdVB1_gp15
subclass of: SO_0000673
so part of: HAdVB1_gp15
location: complement(33881..34960)
location: region:33881-34960:-1
so has part: feature:33881-34960:-1:exon

position:33881:-1
position: 33881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33881-34960:-1:exon

HAdVB1_gp15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: E4
locus tag: HAdVB1_gp15
function: unknown
note: genus-specific
codon start: 1
product: control protein E4orf2
translation: MLERSAVTYCICIPTVLNVSLENFSFIQFLQETLPDYISSNFDDITGGSQYAYSNLVFAGANWGGLRLYCTVASPAIVPGGLLAKQFGDNMREYLQLELREELRAKGMSIDDAILNLLQVTQEQDILSL
SIO_010081: HAdVB1_gp15
subclass of: SO_0000673
so part of: HAdVB1_gp15
location: complement(34145..34534)
location: region:34145-34534:-1
so has part: feature:34145-34534:-1:exon

YP_002213839.1
type: Protein
SIO_000068: ncbiprotein

position:34145:-1
position: 34145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34534:-1
position: 34534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34145-34534:-1:exon

HAdVB1_gp15
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: E4
locus tag: HAdVB1_gp15
note: precedes control protein E4orf3 CDS
SIO_010081: HAdVB1_gp15
subclass of: SO_0000673
so part of: HAdVB1_gp15
location: complement(34178..34960)
location: region:34178-34960:-1
so has part: feature:34178-34960:-1:exon

position:34178:-1
position: 34178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34178-34960:-1:exon

HAdVB1_gp15
type: Intron
subclass of: SO_0000188
RO_0002162: 108098
gene: E4
locus tag: HAdVB1_gp15
note: precedes control protein E4orf2 CDS
SIO_010081: HAdVB1_gp15
subclass of: SO_0000673
so part of: HAdVB1_gp15
location: complement(34553..34960)
location: region:34553-34960:-1
so has part: feature:34553-34960:-1:exon

position:34553:-1
position: 34553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34553-34960:-1:exon

HAdVB1_gp15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 108098
gene: E4
locus tag: HAdVB1_gp15
function: transformation
note: genus-specific; DURP family
codon start: 1
product: control protein E4orf1
translation: MADEALYVYLEGPGATLPEQQQRNNYIFYSPVPFTLYPRGVALLYLKLSIIIPRGYVGCFFSLTDANMSGLYASSRIIHAGHREELSVLLFNHNDRFYEGRAGDPVACLVMERLIFPPVRQATMI
SIO_010081: HAdVB1_gp15
subclass of: SO_0000673
so part of: HAdVB1_gp15
location: complement(34576..34953)
location: region:34576-34953:-1
so has part: feature:34576-34953:-1:exon

YP_002213840.1
type: Protein
SIO_000068: ncbiprotein

position:34576:-1
position: 34576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34953:-1
position: 34953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34576-34953:-1:exon

HAdVB1_gp15
type: Feature
subclass of: SO_0000001
RO_0002162: 108098
regulatory class: TATA_box
gene: E4
locus tag: HAdVB1_gp15
SIO_010081: HAdVB1_gp15
subclass of: SO_0000673
so part of: HAdVB1_gp15
location: complement(35035..35040)
location: region:35035-35040:-1
so has part: feature:35035-35040:-1:exon

position:35035:-1
position: 35035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35035-35040:-1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 108098
standard name: ITR
rpt type: inverted
so part of: sequence
location: 35208..35343
location: region:35208-35343:1
so has part: feature:35208-35343:1:region

position:35208:1
position: 35208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35208-35343:1:region