Vibrio alfacsensis strain 04Ya108 chromosome 1, complete sequence.
type: Entry
definition: Vibrio alfacsensis strain 04Ya108 chromosome 1, complete sequence.
sequence version: NZ_AP024165.1
sequence date: 2023-03-20
sequence: sequence
division: CON
label: NZ_AP024165.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00258720
keyword: RefSeq
source: Vibrio alfacsensis
organism: Vibrio alfacsensis
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.
reference: 1
references: 35917316
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAP024165.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nAnnotated at DFAST https://dfast.nig.ac.jp/\n\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 3.0\nGenome Coverage :: 218x\nSequencing Technology :: Pacbio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/20/2023 06:06:41\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,823\nCDSs (total) :: 4,644\nGenes (coding) :: 4,584\nCDSs (with protein) :: 4,584\nGenes (RNA) :: 179\nrRNAs :: 14, 13, 13 (5S, 16S, 23S)\ncomplete rRNAs :: 14, 13, 13 (5S, 16S, 23S)\ntRNAs :: 135\nncRNAs :: 4\nPseudo Genes (total) :: 60\nCDSs (without protein) :: 60\nPseudo Genes (ambiguous residues) :: 0 of 60\nPseudo Genes (frameshifted) :: 31 of 60\nPseudo Genes (incomplete) :: 36 of 60\nPseudo Genes (internal stop) :: 9 of 60\nPseudo Genes (multiple problems) :: 11 of 60\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000340
sequence length: 3168162
topology: circular
so has quality: SO_0000988
location: 1..3168162
location: region:1-3168162:1
RO_0002162: 1074311

NZ_AP024165
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00258720
type: BioSample
SIO_000068: biosample

1
title: Atypical integrative element with strand-biased circularization activity assists interspecies antimicrobial resistance gene transfer from Vibrio alfacsensis
author: Nonaka, L.
author: Masuda, M.
author: Yano, H.
journal: PLoS One 17 (8), e0271627 (2022)
pubmed: 35917316
comments: DOI:10.1371/journal.pone.0271627 Publication Status: Online-Only

35917316
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Yano, H.
author: Maruyama, F.
author: Sugimoto, Y.
author: Suzuki, S.
author: Masuda, M.
author: Nonaka, L.
journal: Submitted (19-NOV-2020) Contact:Hirokazu Yano Tohoku University, Graduate School of Life Sciences; 2-1-1 Katahira, Aobaku, Sendai 9808577, Japan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3168162:1
position: 3168162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-3168162:1:source
so part of: sequence
organism: Vibrio alfacsensis
mol type: genomic DNA
strain: 04Ya108
isolation source: sediment [ENVO_00002007]
chromosome: 1
country: Japan:Kagawa
lat lon: 34.381478 N 134.100808 E
collection date: 2004-05-14

1074311
type: Taxonomy
SIO_000068: taxonomy

VA249_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: dnaA
locus tag: VA249_RS00005
old locus tag: VYA_00010
so part of: sequence
location: 74..1480
location: region:74-1480:1
so has part: feature:74-1480:1:exon
subclass of: SO_0000010

position:74:1
position: 74
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1480:1
position: 1480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74-1480:1:exon

VA249_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: dnaA
locus tag: VA249_RS00005
old locus tag: VYA_00010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005416782.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosomal replication initiator protein DnaA
translation: MSSSLWLQCLQQLQEELPATEFSMWVRPLQAELNDNTLTLFAPNRFVLDWVRDKYLNSINRLLQEYCGNDVPNLRFEVGSRPVAAPKPVPTRTPADVAAESSAPAQLQARKPVHKTWDDDPQAIANINHRSNVNPKHKFNNFVEGKSNQLGLAAARQVSDNPGAAYNPLFLYGGTGLGKTHLLHAVGNAIVDNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEISGVEDRLKSRFGWGLTVAIEPPELETRVAILMKKAEDHQIHLADEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRRSRSVARPRQLAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREESHDIKEDYSNLIRTLSS
SIO_010081: VA249_RS00005
subclass of: SO_0000673
so part of: VA249_RS00005
location: 74..1480
location: region:74-1480:1
so has part: feature:74-1480:1:exon

WP_128809806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74-1480:1:exon

VA249_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: dnaN
locus tag: VA249_RS00010
old locus tag: VYA_00020
so part of: sequence
location: 1544..2644
location: region:1544-2644:1
so has part: feature:1544-2644:1:exon
subclass of: SO_0000010

position:1544:1
position: 1544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2644:1
position: 2644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1544-2644:1:exon

VA249_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: dnaN
locus tag: VA249_RS00010
old locus tag: VYA_00020
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020430388.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit beta
translation: MKFTIERSHLIKPLQQVSGALGGRATLPILGNLLIKVEENVLSMTATDLEVELVSKVTLEGDFEAGSITVPSRKFLDICRGLPDDSIITFVLEGDRVQVRSGRSRFSLATLPANDFPNIEDWQSEVEVSLTQVELRTLIEKTQFSMANQDVRYYLNGMLFEIDGTTLRSVATDGHRMAVSQTQLGADFAQKQIIVPRKGVQELVKLMDAPEQPVVLQIGSSNVRAEVNNFTFTSKLVDGRFPDYRRVMPQSTTKTLEAGCDELRQAFSRAAILSNEKFRGVRVNLAGSEMRITANNPEQEEAEEMLDVSFEGDAIEIGFNVSYVLDVLNTLRCDKVRVSMSDANASALIENADDDSAMYVVMPIRL
SIO_010081: VA249_RS00010
subclass of: SO_0000673
so part of: VA249_RS00010
location: 1544..2644
location: region:1544-2644:1
so has part: feature:1544-2644:1:exon

WP_128809807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1544-2644:1:exon

VA249_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: recF
locus tag: VA249_RS00015
old locus tag: VYA_00030
so part of: sequence
location: 2654..3733
location: region:2654-3733:1
so has part: feature:2654-3733:1:exon
subclass of: SO_0000010

position:2654:1
position: 2654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3733:1
position: 3733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2654-3733:1:exon

VA249_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: recF
locus tag: VA249_RS00015
old locus tag: VYA_00030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005458661.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA replication/repair protein RecF
translation: MPLSRLIIQQFRNIKACDIHLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKSSLTGRVIQNECHELFVHGRFLNSDQFELPIGINKQRDGSTEVKIGGQSGQKLAQLAQVLPLQLIHPEGFDLLTDGPKHRRAFIDWGVFHTEPAFYDAWGRFKRLNKQRNALLKTARSYRELSYWDQEMARLAENISQWRAQYIEQMRTVAETICQTFLPEFEIQLKYYRGWDKDTPYHEILEKNFERDQALGYTFSGPNKADLRIKVNGTPVEDVLSRGQLKLMVCALRVAQGQHLTAMTGKQCIYLIDDFASELDSQRRKRLADCLKETGAQVFVSSITESQIADMLDDTGKLFHVEHGRIESN
SIO_010081: VA249_RS00015
subclass of: SO_0000673
so part of: VA249_RS00015
location: 2654..3733
location: region:2654-3733:1
so has part: feature:2654-3733:1:exon

WP_221068399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2654-3733:1:exon

VA249_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: gyrB
locus tag: VA249_RS00020
old locus tag: VYA_00040
so part of: sequence
location: 3747..6164
location: region:3747-6164:1
so has part: feature:3747-6164:1:exon
subclass of: SO_0000010

position:3747:1
position: 3747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6164:1
position: 6164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3747-6164:1:exon

VA249_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: gyrB
locus tag: VA249_RS00020
old locus tag: VYA_00040
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005458663.1
GO component: GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase (ATP-hydrolyzing) subunit B
translation: MSENYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCKDIVVTIHEDNSVSVTDDGRGIPTELHPEEKVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSEKVVLTIHRGGHIHTQTYHHGDPQAPLAVVGDTDTTGTQIRFWPSAETFTNIEFHYDILAKRLRELSFLNSGVSIKLVDEREADKSDHFMFEGGIQAFVEHLNTNKTPIIDKIFHFDFEREDGISVEVAMQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAALTRTLNTFMDKEGFSKKAKTATSGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESAMGEKLSEFLIENPSEAKMVCSKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYVYIAQPPLYKVKKGKQEQYIKDEDAMNQYQVSLALDNASLHVNSEAPALAGEALEKLVQQYNAGIKLADRMSRRYPSALVHEFIYTPRLTAEQCQDAAKVEAWTKQLVEQLNAKEVGASQYSFEVEQHEELGLNLPKIIVRTHGVTHDYALSIDLLNSKEYGRLADLSEALDGLLEESAYIKRGERTQPVSSFASALEWLIKESRRGLSLQRYKGLGEMNPDQLWETTMDPETRRMMQVTIEDAVGADQLFTTLMGDQVEPRRNFIEENALKVANLDV
SIO_010081: VA249_RS00020
subclass of: SO_0000673
so part of: VA249_RS00020
location: 3747..6164
location: region:3747-6164:1
so has part: feature:3747-6164:1:exon

WP_221068400.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3747-6164:1:exon

VA249_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00025
old locus tag: VYA_00050
so part of: sequence
location: 6591..7028
location: region:6591-7028:1
so has part: feature:6591-7028:1:exon
subclass of: SO_0000010

position:6591:1
position: 6591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7028:1
position: 7028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6591-7028:1:exon

VA249_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00025
old locus tag: VYA_00050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020195202.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hsp20 family protein
translation: MRNVDFSPLYRNAIGFDRLFNLMEASSAKNTSAGYPPYNIEQKDEHNYRITMAVAGFAEEQLDLTQNENMLIVKGERKAEESKNYVYQGIAERDFERKFQLADYVKVVGASMENGLLHIDLVREIPEAMQPRKIAIGGNNLIENN
SIO_010081: VA249_RS00025
subclass of: SO_0000673
so part of: VA249_RS00025
location: 6591..7028
location: region:6591-7028:1
so has part: feature:6591-7028:1:exon

WP_221068401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6591-7028:1:exon

VA249_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00030
old locus tag: VYA_00060
so part of: sequence
location: complement(7178..8431)
location: region:7178-8431:-1
so has part: feature:7178-8431:-1:exon
subclass of: SO_0000010

position:7178:-1
position: 7178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8431:-1
position: 8431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7178-8431:-1:exon

VA249_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00030
old locus tag: VYA_00060
EC number: 2.6.1.66
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012126669.1
GO function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: valine--pyruvate transaminase
translation: MQFSKFGEKFNQYSGITQLMDDLNDGLRTPGAIMLGGGNPAAIPAMLDYFRQASEEMLASGELVAALANYDGPQGKDAFVKALAQLFRETYGWDISEKNISLTNGSQSGFFYLFNLLAGKQPDGSHKKVLLPIAPEYIGYGDAGIDEDIFVSYHPEIELLDNGLFKYHVDFEQLKIDDSVAAICASRPTNPTGNVLTDKEVRKLDKLARENNIPLIIDNAYGLPFPNIIFEDVEPFWNENTILCMSLSKLGLPGVRCGIVIASEEITQALTNMNGIISLAPGSVGPALANHIIGKGDLLKLSSEVIKPFYKQKSQRAVELLQEAITDKRFRIHKPEGAIFLWLWFDELPITTMELYQRLKARGVLIVPGEYFFIGQKDEWDHAHQCLRMNYVQDDEMMQKGIAIIAEEVEKAYREGK
SIO_010081: VA249_RS00030
subclass of: SO_0000673
so part of: VA249_RS00030
location: complement(7178..8431)
location: region:7178-8431:-1
so has part: feature:7178-8431:-1:exon

WP_221068402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7178-8431:-1:exon

VA249_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00035
old locus tag: VYA_00070
so part of: sequence
location: 8747..8965
location: region:8747-8965:1
so has part: feature:8747-8965:1:exon
subclass of: SO_0000010

position:8747:1
position: 8747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8965:1
position: 8965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8747-8965:1:exon

VA249_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00035
old locus tag: VYA_00070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012551717.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Flp family type IVb pilin
translation: MLTKLFVKTQLFIESFKNDERGVTAIEYAILGVCMSAVVLAVFNGALREALEGAVSTISDNIAAADAANVTE
SIO_010081: VA249_RS00035
subclass of: SO_0000673
so part of: VA249_RS00035
location: 8747..8965
location: region:8747-8965:1
so has part: feature:8747-8965:1:exon

WP_221068403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8747-8965:1:exon

VA249_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00040
old locus tag: VYA_00080
so part of: sequence
location: 8968..9405
location: region:8968-9405:1
so has part: feature:8968-9405:1:exon
subclass of: SO_0000010

position:8968:1
position: 8968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9405:1
position: 9405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8968-9405:1:exon

VA249_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00040
old locus tag: VYA_00080
EC number: 3.4.23.43
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017099669.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prepilin peptidase
translation: MLIKLWWLIPLAAMAFLASYQDIKYRKIPNGVALSVAVLGVFFVCIERDYSQFLIPLITLCFGMVLFKLNILAAGDSKLFAAFSLMIAPSYMLLTLWVISVIGGVLAIGLWGLSRLTKDTSWIDRGVPYGVPICIGSLLGIAASL
SIO_010081: VA249_RS00040
subclass of: SO_0000673
so part of: VA249_RS00040
location: 8968..9405
location: region:8968-9405:1
so has part: feature:8968-9405:1:exon

WP_221068404.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8968-9405:1:exon

VA249_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: cpaB
locus tag: VA249_RS00045
old locus tag: VYA_00090
so part of: sequence
location: 9414..10202
location: region:9414-10202:1
so has part: feature:9414-10202:1:exon
subclass of: SO_0000010

position:9414:1
position: 9414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10202:1
position: 10202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9414-10202:1:exon

VA249_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: cpaB
locus tag: VA249_RS00045
old locus tag: VYA_00090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009708044.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Flp pilus assembly protein CpaB
translation: MNTKVILVLATVAITVGLYGVTQSKSEIPVLPNKPKIEEKKIKVWTLKRDLQKAERLSRRDINIEYLTREQAASFGIDSDTTLTFEQRLVAIAPIEKGDMLDDTMLTSPGEDEYISTVIEPGYVPFNMTVPVNDVVGGTIKIGDIVDISVMAATKQNLAAENTVSDINHLTMTPLIAQIPVLDMIKKERSSSRLTDEKTTEVTLILQVTNRQLAKLSVAKRIADVMIHKSIGENYVDDLHADSSDVIRVSGQSEPIKQYRFN
SIO_010081: VA249_RS00045
subclass of: SO_0000673
so part of: VA249_RS00045
location: 9414..10202
location: region:9414-10202:1
so has part: feature:9414-10202:1:exon

WP_221068405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9414-10202:1:exon

VA249_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00050
old locus tag: VYA_00100
so part of: sequence
location: 10211..11542
location: region:10211-11542:1
so has part: feature:10211-11542:1:exon
subclass of: SO_0000010

position:10211:1
position: 10211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11542:1
position: 11542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10211-11542:1:exon

VA249_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00050
old locus tag: VYA_00100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009848145.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pilus assembly protein N-terminal domain-containing protein
translation: MKRLLKIMVHAFILLSSAVVAKESVTLSVGSAKTFALSEQVDSVFISNQTVADYQLIGDDKVVLLGKSEGEASFIIFDQQGHEMVNQTLLVTQSYLQLEEQVNAQFPYSEVKISGLGKNVVLSGFATSNNERDNIYQMVGELLGKKSTNDREFELQDNSNVLDDMTVDFMAAPRYDGVVNNIEVNTTKQVNVKLTIAEVSHSFIQDFGIKMGSNGNMGIFVDQLTSFSADDIVSVISAVGSDRIGQVLAEPNLSVISGEQASFLVGGEMPVVTVADGSSNVDYKEFGVRLALMAKVLRDDKIRLALSPEVSSLDNTYTSELFDLPAFKTRRAQTTVELGDGQSFVLGGLLNSEERESLTRIPFIGDIPILGALFRHTGTERNKTELIIVATVNLVKPVKAEQIQLPTMEKTSTLKRFLALDGHYDKAQEQWASEVLNAGGFRQ
SIO_010081: VA249_RS00050
subclass of: SO_0000673
so part of: VA249_RS00050
location: 10211..11542
location: region:10211-11542:1
so has part: feature:10211-11542:1:exon

WP_221068406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10211-11542:1:exon

VA249_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00055
old locus tag: VYA_00110
so part of: sequence
location: 11539..12009
location: region:11539-12009:1
so has part: feature:11539-12009:1:exon
subclass of: SO_0000010

position:11539:1
position: 11539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12009:1
position: 12009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11539-12009:1:exon

VA249_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00055
old locus tag: VYA_00110
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKLMLSTLAAISLMGCADHIVEPRGTTITLQPTEFSFSVQSNDTAFALKKLNEFTQKYRIQSGSQWVITSYSRQGHELSKQYRDVLVKRGVENANVSLVKVEHASRFDVQVSVVQLKPELEICHQEKVGQYGHGHLGCYTDGSRWQSMVNPQRAL
SIO_010081: VA249_RS00055
subclass of: SO_0000673
so part of: VA249_RS00055
location: 11539..12009
location: region:11539-12009:1
so has part: feature:11539-12009:1:exon

WP_221068407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11539-12009:1:exon

VA249_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00060
old locus tag: VYA_00120
so part of: sequence
location: 12032..13252
location: region:12032-13252:1
so has part: feature:12032-13252:1:exon
subclass of: SO_0000010

position:12032:1
position: 12032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13252:1
position: 13252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12032-13252:1:exon

VA249_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00060
old locus tag: VYA_00120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009848147.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATPase
translation: MFDLVDKLSKNTPTHHQLESKCALLYQTAACKNVVQKAFRFEGLPEPVSLLNQDKSYPDVQAQADLDVVIVELNNSTNVIEDAKLIAHQIPTNVSVIIIGSEDSISTIRGLKQLGFYYLFWSATENEVMEFYHNVYGNHEQKKGVAARRKAKQVAFLGVKGGVGTSLIASEVSRALAKHHSASTLLIDHTYTGSNIDVLLGLQKFAKRSVQKGTMTSSIDSDFAGSLMQKVAQNLSVLGIESDAFTRAELHEYTEALKEQVLKEHVFVIEDYSHTVATNEEFDRAVTDIDTLVVVFDATVSSLRELNRIVSELEMRYPDLLVLTVMNHSRPQNAASINVSDVEKYFGRDADAVVEFDHKVNHFLLQGQSILESKSEMSIGLKNIVARLVGDKPSTKKAWLSGWLKR
SIO_010081: VA249_RS00060
subclass of: SO_0000673
so part of: VA249_RS00060
location: 12032..13252
location: region:12032-13252:1
so has part: feature:12032-13252:1:exon

WP_221068408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12032-13252:1:exon

VA249_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00065
old locus tag: VYA_00130
so part of: sequence
location: 13262..14545
location: region:13262-14545:1
so has part: feature:13262-14545:1:exon
subclass of: SO_0000010

position:13262:1
position: 13262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14545:1
position: 14545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13262-14545:1:exon

VA249_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00065
old locus tag: VYA_00130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009848148.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CpaF family protein
translation: MQHSKRTYVHLRNQIFDALDAAAVTSLSRPDLETQLSNAVDMLVGRDQLSVSSLAKSEYVLSMIHELVGLGPLQVLMDDESITDIMINGHKQVYIERSGLVERSEITFLDEQQLVDIAKRIADRVGRRVDESSPTCDARLEDGSRVNIVIPPVAIDGTSISIRKFRKKSIGFDELVTFGALSHEMSLILALAAKCRLNVLISGGTGSGKTTMLNAMSQYAAGRERIVTIEDTAELRLLQPHVVRLETRVAGIEGTGAITARDLVINSLRMRPDRIIVGECRGAEAFEMLQAMNTGHDGSMSTLHANSARDALARVEAMVMMATSSLPLEAIRRSIVSAVDLVVQVSRLHDGSRKVMSITEVVGMEGQSVVLEELFAFKAEPHNQEGKITGRYVTSGVMSRSVLFEKARFFGAEQQLANAIEAIELAR
SIO_010081: VA249_RS00065
subclass of: SO_0000673
so part of: VA249_RS00065
location: 13262..14545
location: region:13262-14545:1
so has part: feature:13262-14545:1:exon

WP_221068409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13262-14545:1:exon

VA249_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00070
old locus tag: VYA_00140
so part of: sequence
location: 14556..15473
location: region:14556-15473:1
so has part: feature:14556-15473:1:exon
subclass of: SO_0000010

position:14556:1
position: 14556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15473:1
position: 15473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14556-15473:1:exon

VA249_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00070
old locus tag: VYA_00140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017099665.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system F family protein
translation: MYWLLLLIGAGLISIALWPKKEKRAQEYLSQYRFQTQANTTFSLQAINLTSLSDRNVRQRLLQRWDNLQRQLGPYAQVKVLVFSVAVIVVAIVINRTMLRLAFYEVLPVALLLGWWFGYIWMQKRERKHFDEAFPDALNMLTSSISAGESIGRGIMYVGEKLEGEVGQEFKRMGERLKLGESLDDVFRKSCQRFPYPAFHFFVITLRANMQRGGQLKEVMSRLNRQMFEARAIERKKYALTSEARISAKIVCATPFFFLFMLQFLSPENYEFVMFHPEGRPLLYYLLISESVGMSIIWALMNKVK
SIO_010081: VA249_RS00070
subclass of: SO_0000673
so part of: VA249_RS00070
location: 14556..15473
location: region:14556-15473:1
so has part: feature:14556-15473:1:exon

WP_221069748.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14556-15473:1:exon

VA249_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00075
old locus tag: VYA_00150
so part of: sequence
location: 15473..16360
location: region:15473-16360:1
so has part: feature:15473-16360:1:exon
subclass of: SO_0000010

position:16360:1
position: 16360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15473-16360:1:exon

VA249_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00075
old locus tag: VYA_00150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009708050.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system F family protein
translation: MLTQYSAWSFFSIVSISFGGMLLLYWGISRIWYQQKISRIARHHKARKQSELQVNNLLSPLTNMVAASDSDIQQRFHDAGIKNTLLAQWFMSLKYSALILGEMVIALVVQLIELDRMQWIAVAAIWAMVAITLPDIWLNARKTNRQRRISRSLPYLIDLMAICVQTGMTIEASLKYLAREISGFNPELGKLLDNTNQRARIVGMERALEELYQQVPSSEMRSFMLTLTQSMQHGSSIYTMLTTLSGDIREVQMLELEEQIGKLAAKMSIPLIVFILIPLVFVIAAPGVMRMMSHV
SIO_010081: VA249_RS00075
subclass of: SO_0000673
so part of: VA249_RS00075
location: 15473..16360
location: region:15473-16360:1
so has part: feature:15473-16360:1:exon

WP_221068410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15473-16360:1:exon

VA249_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00080
old locus tag: VYA_00160
so part of: sequence
location: 16353..17117
location: region:16353-17117:1
so has part: feature:16353-17117:1:exon
subclass of: SO_0000010

position:16353:1
position: 16353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17117:1
position: 17117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16353-17117:1:exon

VA249_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00080
old locus tag: VYA_00160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009708051.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: secretion protein
translation: MFKRLLICLMPFVLAACSSTSQQWQQEDSKEAIYQKTNNHTQLVELYKQKLQQSDEQEVREKLAKSYLALGDAESALFYIKPLTDQAQPSIETLLIQAQAFGELAQYSAAINSAKAALESDSKNAEAENLLGTFYGYNYQYDLARRYFERSREHFFDGATVNNNLAVLDIAEGKYKHAIQRLLPLYKNGQADEKVMANLTLSMAKEGQFAFVKQALSEKYSHHQIEQIYQALRQFDPLKAVQKQQTLTENIRES
SIO_010081: VA249_RS00080
subclass of: SO_0000673
so part of: VA249_RS00080
location: 16353..17117
location: region:16353-17117:1
so has part: feature:16353-17117:1:exon

WP_221068411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16353-17117:1:exon

VA249_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00085
old locus tag: VYA_00170
so part of: sequence
location: 17107..17595
location: region:17107-17595:1
so has part: feature:17107-17595:1:exon
subclass of: SO_0000010

position:17107:1
position: 17107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17595:1
position: 17595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17107-17595:1:exon

VA249_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00085
old locus tag: VYA_00170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009848152.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pilus assembly protein
translation: MKVKSQRGVASVEFAIGFFAFWLMCMAWVEMSYMSYVSAINDLAISEISRTAKKSSADYMDIVQEVLHRENSIWNQVIDGDHFKVSIQYLDNIGDLTDFTGQCDLVEEDLSKECGEADSAAIAVYHIDYAFQPIFSYFLGLDGLMSREMLVVQEYERSQFEI
SIO_010081: VA249_RS00085
subclass of: SO_0000673
so part of: VA249_RS00085
location: 17107..17595
location: region:17107-17595:1
so has part: feature:17107-17595:1:exon

WP_221068412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17107-17595:1:exon

VA249_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: tadF
locus tag: VA249_RS00090
old locus tag: VYA_00180
so part of: sequence
location: 17570..18130
location: region:17570-18130:1
so has part: feature:17570-18130:1:exon
subclass of: SO_0000010

position:17570:1
position: 17570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18130:1
position: 18130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17570-18130:1:exon

VA249_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: tadF
locus tag: VA249_RS00090
old locus tag: VYA_00180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011261287.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tight adherence pilus pseudopilin TadF
translation: MSVHNLKSNSRHLQRGTFSIEFAIVGMFFSLLLVFSGDVIIKLSVKGKLDRLSYSLVNVVKERTQLYEADYELSKREVDDIDTIARHSLMRTFGRFQADRYGLLVEEQSFEEVDKPNEPVREYRGTLDCNISKPISQLQDLSVVSNRGRQMPIYRVSICYQTDNWIGNLLGTQFTRVESDSVVIGR
SIO_010081: VA249_RS00090
subclass of: SO_0000673
so part of: VA249_RS00090
location: 17570..18130
location: region:17570-18130:1
so has part: feature:17570-18130:1:exon

WP_221068413.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17570-18130:1:exon

VA249_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00095
old locus tag: VYA_00190
so part of: sequence
location: 18133..19443
location: region:18133-19443:1
so has part: feature:18133-19443:1:exon
subclass of: SO_0000010

position:18133:1
position: 18133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19443:1
position: 19443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18133-19443:1:exon

VA249_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00095
old locus tag: VYA_00190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009848154.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pilus assembly protein TadG-related protein
translation: MATSIHKQSGHAAMLFAMIIPALFGVFMLGSDGARALQTKARLEEAAEAAVLAVSAEDSNDNALAKRYIEHYLYDVESVEDIQVERLSCDALPECQAGLERGEARYFEYRVAGLSQHKSWFAGNDAMVGFGKTFNVTGSSKARRYQSQALDITFVVDFSESMNLDWSGGHKSKIQDLKDIIEDVTDELDKFNKLNPDKQNRVALTGFNRRTINANSDDELIVRDQRIINKMGQYDKDDEVNFKKTIEQQFKIKGEAKRVPNGDDDARFNDIFYETNFESFNKKVKKFKAGGGTASLQGIIRAGQIITMLADKPKQLIIILSDGEDWNHYAEQTPKLVDKGMCSNIRNIVGGGELKNVGYLPDRANVQGNKSLGMVTSKGESMSARMAVIGFDYDLKANTGLKKCVGKENVFKAENKDEILDQILALITEEVGHLSL
SIO_010081: VA249_RS00095
subclass of: SO_0000673
so part of: VA249_RS00095
location: 18133..19443
location: region:18133-19443:1
so has part: feature:18133-19443:1:exon

WP_221068414.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18133-19443:1:exon

VA249_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00100
old locus tag: VYA_00200
so part of: sequence
location: 19455..20090
location: region:19455-20090:1
so has part: feature:19455-20090:1:exon
subclass of: SO_0000010

position:19455:1
position: 19455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20090:1
position: 20090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19455-20090:1:exon

VA249_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00100
old locus tag: VYA_00200
inference: COORDINATES: protein motif:HMM:NF012894.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OmpA family protein
translation: MKKLILAFITAAPLAAWAQNNTNEALYYYCQQGKNQYQESVALSPRVAVKYHQGPFMQITLHDEQLSLEPVLLSQLEQAGIDRSCGAYLLSRAQISEKTRGEIAARVLFDFDKASLNAQSEHILNKLNQHLTKLPEASLLVVGNTDAKGRDSYNFDLGLKRAQTVARYLDGTHEKVAASRSDGESHPVSSNSNAFGRELNRRVDISLSQQD
SIO_010081: VA249_RS00100
subclass of: SO_0000673
so part of: VA249_RS00100
location: 19455..20090
location: region:19455-20090:1
so has part: feature:19455-20090:1:exon

WP_221068415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19455-20090:1:exon

VA249_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00105
old locus tag: VYA_00210
so part of: sequence
location: complement(20087..21469)
location: region:20087-21469:-1
so has part: feature:20087-21469:-1:exon
subclass of: SO_0000010

position:20087:-1
position: 20087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21469:-1
position: 21469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20087-21469:-1:exon

VA249_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00105
old locus tag: VYA_00210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009708056.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MKRLISSSFRRRVLFITTLIGTTYLFTISSFIYHIEKDKLFEDYALDLVSHIPAITNELLASNQVTPIDKWDEIYPSESSRFSMFICDEQNNELWRSMNDESRQKLIAKGISVPNIDNFCIDPLLPTKINQFKLIQTKQGSAFIAHVIPLDKTPYNPQGRIVLLRRMEDKVAYLNQLKFNVAAFSVISALLIIFILYLVYRWGFKPFKVLEKELNEVKTNKKTKLVKDYPEDFLPITGALNELMFQQQENEQRYQRALNDLAHSLKTRVAVSQALLDELDEGNTHAINQQLLEMDDVIQGQLKRASFGVKGIVENTTLIKPLLNSLLLMFDKVHIDKGISVELFLSDEQTVSMNKADVMEVFGNILENAYRYAKKRIDIVVNNTESGIILTFSNDGPPIDESISANLFKRGVRADEQNPGTGLGLALCDEIIHSYKGAIWFETPNDPSMGASLKVLLPYR
SIO_010081: VA249_RS00105
subclass of: SO_0000673
so part of: VA249_RS00105
location: complement(20087..21469)
location: region:20087-21469:-1
so has part: feature:20087-21469:-1:exon

WP_221068416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20087-21469:-1:exon

VA249_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00110
old locus tag: VYA_00220
so part of: sequence
location: complement(21475..22155)
location: region:21475-22155:-1
so has part: feature:21475-22155:-1:exon
subclass of: SO_0000010

position:21475:-1
position: 21475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22155:-1
position: 22155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21475-22155:-1:exon

VA249_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00110
old locus tag: VYA_00220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009848157.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MLVVLVEDNEILNHHLTSQLKDRGHTVYADRSASSSLQTIQKYPNADAMIIDLGLPDFDGITLIKQIRRKEISVPILILTARSNWQDKVEGLNAGADDYLTKPFQLEELLARLEALVRRYQGFSHSVIKAGDITLDTQAKSIVYGEKTLDLTALEYQIFELLIRNSQKILSKEQIAESLYDIEGSVQLNNIEVIVSRLRKKLTQHSHDKIISTIRGQGYRFELEAK
SIO_010081: VA249_RS00110
subclass of: SO_0000673
so part of: VA249_RS00110
location: complement(21475..22155)
location: region:21475-22155:-1
so has part: feature:21475-22155:-1:exon

WP_221068417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21475-22155:-1:exon

VA249_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: glyS
locus tag: VA249_RS00115
old locus tag: VYA_00230
so part of: sequence
location: complement(22258..24339)
location: region:22258-24339:-1
so has part: feature:22258-24339:-1:exon
subclass of: SO_0000010

position:22258:-1
position: 22258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24339:-1
position: 24339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22258-24339:-1:exon

VA249_RS00115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: glyS
locus tag: VA249_RS00115
old locus tag: VYA_00230
EC number: 6.1.1.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001040221.1
GO component: GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine--tRNA ligase subunit beta
translation: MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELAHEGVKWFAAPRRLALKVAALAESQSDKVVEKRGPAVSAAFDAEGNATKAAQGWARGCGITVDQAERMVTDKGEWLLFKQEVKGQPTSEVVVELAAKALANLPIAKPMRWGNKTTQFIRPVKTLTMLMGSDLIEGEILGVASDRTIRGHRFMGEKEFTIDSAEQYPAILEERGKVMADYEARKAIILADAEKAAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFPVYSHENGDENKKLLPNFIFVSNIESKEPRYVIEGNEKVVRPRLADAEFFFNTDRKRPLIDRLPELEQAIFQKQLGTIKDKTDRIAALAGYIAKQIDADVEKATRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEDEQVALALYEQYMPRFAGDELPSNGVSSAVAMADKLDTIVGIFGIGQAPKGSDPFALRRASLGVLRIIVENGFNLDLVDLIHEAKVQFGDKLTNENVETDVLEFMLGRFRAWYQDAGFSVDIIQAVLARRPTKPADFDQRVKAVSHFRELEAAEALAAANKRVGNILAKFDGELAADIDLALLQEDAEKALAESVEVMTEALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKKNRLTLLNNLRNLFLQIADISVLQK
SIO_010081: VA249_RS00115
subclass of: SO_0000673
so part of: VA249_RS00115
location: complement(22258..24339)
location: region:22258-24339:-1
so has part: feature:22258-24339:-1:exon

WP_221068418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22258-24339:-1:exon

VA249_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: glyQ
locus tag: VA249_RS00120
old locus tag: VYA_00240
so part of: sequence
location: complement(24354..25271)
location: region:24354-25271:-1
so has part: feature:24354-25271:-1:exon
subclass of: SO_0000010

position:24354:-1
position: 24354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25271:-1
position: 25271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24354-25271:-1:exon

VA249_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: glyQ
locus tag: VA249_RS00120
old locus tag: VYA_00240
EC number: 6.1.1.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006743179.1
GO component: GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine--tRNA ligase subunit alpha
translation: MQKYDIKTFQGMILALQDYWAQNGCTIVQPLDMEVGAGTSHPMTCLRALGPEPMSTAYVQPSRRPTDGRYGENPNRLQHYYQFQVALKPSPDNIQELYLGSLEVLGIDPLVHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVTGEITYGIERLAMYIQEVDSVYDLTWNIAPDGSKVTYGDIFHQNEVEQSTYNFEHADVEFLFGFFEQCEKECKALLELEKPLPLPAYERILKAAHAFNLLDARKAISVTERQRYILRIRDLTKSVAEAYYASREALGFPMCKKEQA
SIO_010081: VA249_RS00120
subclass of: SO_0000673
so part of: VA249_RS00120
location: complement(24354..25271)
location: region:24354-25271:-1
so has part: feature:24354-25271:-1:exon

WP_221068419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24354-25271:-1:exon

VA249_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00125
old locus tag: VYA_00250
so part of: sequence
location: 25761..26315
location: region:25761-26315:1
so has part: feature:25761-26315:1:exon
subclass of: SO_0000010

position:25761:1
position: 25761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26315:1
position: 26315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25761-26315:1:exon

VA249_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00125
old locus tag: VYA_00250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017818157.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TMEM165/GDT1 family protein
translation: MSVLAISITTVALAEIGDKTQLLSLLLASRYRKPIPIIAAIFLATIANHALAAWLGVVVADYLSPDILKWVLVVSFVAMAAWVLIPDKLDDDEQISNRGPFIASFIAFFVAEIGDKTQIATSILGAQYADALSWVILGTTIGMLLANVPVVLIGKLSADKMPLGLIRKITAFLFIALAIGAALF
SIO_010081: VA249_RS00125
subclass of: SO_0000673
so part of: VA249_RS00125
location: 25761..26315
location: region:25761-26315:1
so has part: feature:25761-26315:1:exon

WP_221068420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25761-26315:1:exon

VA249_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00130
old locus tag: VYA_00260
so part of: sequence
location: 26476..26736
location: region:26476-26736:1
so has part: feature:26476-26736:1:exon
subclass of: SO_0000010

position:26476:1
position: 26476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26736:1
position: 26736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26476-26736:1:exon

VA249_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00130
old locus tag: VYA_00260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014230433.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLTRYMGMSPKSQSYLFTFGLALCLLAMVLTDMWLPIVAGSFILTGLTVEAWIRVAHIIPMHEEMRAMRKQLNKLQSEVRTLEYDE
SIO_010081: VA249_RS00130
subclass of: SO_0000673
so part of: VA249_RS00130
location: 26476..26736
location: region:26476-26736:1
so has part: feature:26476-26736:1:exon

WP_221068421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26476-26736:1:exon

VA249_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: tusA
locus tag: VA249_RS00135
old locus tag: VYA_00270
so part of: sequence
location: complement(26781..27029)
location: region:26781-27029:-1
so has part: feature:26781-27029:-1:exon
subclass of: SO_0000010

position:26781:-1
position: 26781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27029:-1
position: 27029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26781-27029:-1:exon

VA249_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: tusA
locus tag: VA249_RS00135
old locus tag: VYA_00270
EC number: 2.8.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005394130.1
GO function: GO:0097163 - sulfur carrier activity [Evidence IEA]
GO process: GO:0002143 - tRNA wobble position uridine thiolation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase TusA
translation: MSFNPELATKTLEAEGLRCPEPVMMVRKTIRTMQDGEVLLVKADDPSTTRDIPSFCRFMDHQLIAAQTEHLPYQYLIKKGLE
SIO_010081: VA249_RS00135
subclass of: SO_0000673
so part of: VA249_RS00135
location: complement(26781..27029)
location: region:26781-27029:-1
so has part: feature:26781-27029:-1:exon

WP_211915663.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26781-27029:-1:exon

VA249_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00140
old locus tag: VYA_00280
so part of: sequence
location: 27162..27344
location: region:27162-27344:1
so has part: feature:27162-27344:1:exon
subclass of: SO_0000010

position:27162:1
position: 27162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27344:1
position: 27344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27162-27344:1:exon

VA249_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00140
old locus tag: VYA_00280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010444806.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLTALDRLTIYSVLCFISFCALVLRTPAETSLMPLVGMSATIIGIWIEMHKWSGASEQEN
SIO_010081: VA249_RS00140
subclass of: SO_0000673
so part of: VA249_RS00140
location: 27162..27344
location: region:27162-27344:1
so has part: feature:27162-27344:1:exon

WP_038870247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27162-27344:1:exon

VA249_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00145
old locus tag: VYA_00290
so part of: sequence
location: 27513..28454
location: region:27513-28454:1
so has part: feature:27513-28454:1:exon
subclass of: SO_0000010

position:27513:1
position: 27513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28454:1
position: 28454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27513-28454:1:exon

VA249_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00145
old locus tag: VYA_00290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005458693.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MELEDIYRRDLNLLVALRVLIEESSVSKAATRLNLSQSAMSRVLGRLRDLLGDPLFTRQGQHLIPTQKALEIDRSLGDPLESLRQLLSPREFDPRNCDQTFNIATTDYAMQTILPFALPRIYQEAPNVSFNFLPLQHDRLSDQLTYESADLAICRPTGPVEPLRSEVLGRVGVLCMLSKQHPLADKEMSLDDYLRYPHAMIAISDGVKALIEQALIEKPKRKMVLRAYHLEAALAIVDTLPIIITVPADLAYLVADRYDLVVKPLPFQFTPFEYSMIWHARCEHSPAQEWLRAVVREECSRLIAKRIEDMGLD
SIO_010081: VA249_RS00145
subclass of: SO_0000673
so part of: VA249_RS00145
location: 27513..28454
location: region:27513-28454:1
so has part: feature:27513-28454:1:exon

WP_221068422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27513-28454:1:exon

VA249_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00150
old locus tag: VYA_00300
so part of: sequence
location: complement(28505..29503)
location: region:28505-29503:-1
so has part: feature:28505-29503:-1:exon
subclass of: SO_0000010

position:28505:-1
position: 28505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29503:-1
position: 29503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28505-29503:-1:exon

VA249_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00150
old locus tag: VYA_00300
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010648493.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MDR family oxidoreductase
translation: MFNALVLNQEDKRTIASIEQIDETQLPEGDVLIDVDYSSLNYKDGLAITGKGKIIRNFPMVPGIDLAGTVVSSEDDRYQAGDKVVLTGWGVGENHWGGMSQRARLKADWLVPLPKGLDSKKAMMIGTAGFTGMLCVQALLDAGIKPEAGEILVTGASGGVGSVAVTLLAQLGYKVAAVTGRVEQNGPLLEKLGASRIIDRVEFEEPARPLEKQVWAGAVDTVGSKVLAKVLAQMDYNSAVAACGLAGGFDLPTTVMPFILRNVRLQGVDSVSCPFEKRTAAWEKLVELLPDSYFEQACTEVELAEAPKYAEDITNGQVTGRVVIKLFNPSIE
SIO_010081: VA249_RS00150
subclass of: SO_0000673
so part of: VA249_RS00150
location: complement(28505..29503)
location: region:28505-29503:-1
so has part: feature:28505-29503:-1:exon

WP_221068423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28505-29503:-1:exon

VA249_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: fadA
locus tag: VA249_RS00155
old locus tag: VYA_00310
so part of: sequence
location: complement(29761..30936)
location: region:29761-30936:-1
so has part: feature:29761-30936:-1:exon
subclass of: SO_0000010

position:29761:-1
position: 29761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30936:-1
position: 30936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29761-30936:-1:exon

VA249_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: fadA
locus tag: VA249_RS00155
old locus tag: VYA_00310
EC number: 2.3.1.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017635587.1
GO function: GO:0003988 - acetyl-CoA C-acyltransferase activity [Evidence IEA]
GO process: GO:0009062 - fatty acid catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetyl-CoA C-acyltransferase FadA
translation: MTNQTRNVVVVDCLRTPMGRSKGGAFRHTRAEDLSARLMKGILARNPEVNPSEIEDIYWGCVQQTLEQGFNVARNAALLAGLPIEIGAVTVNRLCGSSMQALHDGTRAIMTGDAEICLIGGVEHMGHVPMNHGVDFHPGMSKTVAKAAGMMGLTAEMLGKLHGISRQQQDEFAARSHARAHAATVEGRFKNEILPIEGHAADGTLFTLDYDEVIRPETSVEGLSQLRPVFDPVNGTVTAGTSSALSDGASAMLIMSEEKANELGLKIRARIKGMAIAGCDPSIMGYGPVPATQKALKRAGLSIEDMDVVELNEAFAAQSLPCAKDLGLLEVMDEKVNLNGGAIALGHPLGCSGSRISTTLINLMEDKDAKYGLATMCIGLGQGIATVFERP
SIO_010081: VA249_RS00155
subclass of: SO_0000673
so part of: VA249_RS00155
location: complement(29761..30936)
location: region:29761-30936:-1
so has part: feature:29761-30936:-1:exon

WP_221068424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29761-30936:-1:exon

VA249_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: fadB
locus tag: VA249_RS00160
old locus tag: VYA_00320
so part of: sequence
location: complement(30951..33152)
location: region:30951-33152:-1
so has part: feature:30951-33152:-1:exon
subclass of: SO_0000010

position:30951:-1
position: 30951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33152:-1
position: 33152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30951-33152:-1:exon

VA249_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: fadB
locus tag: VA249_RS00160
old locus tag: VYA_00320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014230439.1
GO function: GO:0003857 - 3-hydroxyacyl-CoA dehydrogenase activity [Evidence IEA]; GO:0008692 - 3-hydroxybutyryl-CoA epimerase activity [Evidence IEA]; GO:0004165 - delta(3)-delta(2)-enoyl-CoA isomerase activity [Evidence IEA]; GO:0004300 - enoyl-CoA hydratase activity [Evidence IEA]
GO process: GO:0009062 - fatty acid catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fatty acid oxidation complex subunit alpha FadB
translation: MIYQAETLQVKEVHNGIAELSFCSPKSVNKLDLATLESLDKALDALIAHQGLKGLMLTSDKDAFIVGADITEFLGLFAKTDAELDQWLQFANSIFNKLEDLPVPTISVLKGHTLGGGCECVLATDMRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEVITQGKACRADEALKIGLLDAVVDTDALYESALKTLTSAINEKLDWQARRKQKTSPLTLSKLESMMSFTMAKGLVAQKAGPHYPAPMTAVITIEEGARFARNEALDIERQHFVKLAKSEEAKSLVGLFLNDQYIKGLAKKSAKSASKDTQRAAVLGAGIMGGGIAYQSALKGVPVLMKDIAQPSLDLGMTEASKLLNKRLSRGRIDGFKMAGILASITPSLHYAGIEESDVIVEAVVENPKVKAAVLSEVESHVGEDTVITSNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEHTSDETINRVVAYAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTKIDKVMERKFGWPMGPAYLLDVVGIDTAHHAQAVMAQGFPERMGKQGRDAIDALFEASKYGQKNGSGFYSYTIDRKGKPKKTFSEEILPVLADICADKPFHDKERFDEQTIIQRMMIPMINEVVLCLQEGIIATPQEADMALVYGLGFPPFRGGVFRYLDSVGIAEFVAIAKQYSELGAMYQVPQMLIDMAEKGHPVYGKTFYGAQQQGSI
SIO_010081: VA249_RS00160
subclass of: SO_0000673
so part of: VA249_RS00160
location: complement(30951..33152)
location: region:30951-33152:-1
so has part: feature:30951-33152:-1:exon

WP_221068425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30951-33152:-1:exon

VA249_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00165
old locus tag: VYA_00330
so part of: sequence
location: 33421..34044
location: region:33421-34044:1
so has part: feature:33421-34044:1:exon
subclass of: SO_0000010

position:33421:1
position: 33421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34044:1
position: 34044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33421-34044:1:exon

VA249_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00165
old locus tag: VYA_00330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005378891.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YigZ family protein
translation: MNDQPYLIPAEPVQFEEEIKKSLFITYLAHTPSVEKAKAFVEQIKSKHSDARHNCWGFVAGRPEDSMKWGFSDDGEPSGTAGKPILAQLSGSGVGEITAVVTRYYGGIRLGTGGLVKAYGGGVQQALKQLQTIEKKITTKLRLELDYGFMPIVQSLMPQFGAVEVDAEYSVQVALVVEIELREVSAFTQTIINKSGAKAIVTPLDGQ
SIO_010081: VA249_RS00165
subclass of: SO_0000673
so part of: VA249_RS00165
location: 33421..34044
location: region:33421-34044:1
so has part: feature:33421-34044:1:exon

WP_221068426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33421-34044:1:exon

VA249_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00170
old locus tag: VYA_00340
so part of: sequence
location: 34091..35548
location: region:34091-35548:1
so has part: feature:34091-35548:1:exon
subclass of: SO_0000010

position:34091:1
position: 34091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35548:1
position: 35548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34091-35548:1:exon

VA249_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00170
old locus tag: VYA_00340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004736668.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015379 - potassium:chloride symporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrkH family potassium uptake protein
translation: MQFRSIIRIVGLLLALFSVTMLAPALVALIYRDGAGVPFVTTFFVLLLWGGVCWFPNRRHKHELKARDGFLIVVLFWTVLGSAGAIPFLIADNPNVSVTDAFFESFSALTTTGATVIVGLDELPKAILFYRQLLQWFGGMGIIVLAVAILPVLGIGGMQLYRAEIPGPVKDTKMTPRIAETAKALWYIYLSLTIACALAFWLAGMTPFDAISHSFSTIAIGGFSTHDASMGYFDSYAINMITVVFLLISACNYSLHFAAFASGGVHPKYYWKDPEFRAFIFIQVILFLVCFLLLLNHHSYDSPYDAFDQALFQTVSISTTAGFTTTGFADWPLFLPVLLLFSSFIGGCAGSTGGGMKVIRILLLTLQGARELKRLVHPRAVYTIKVGGTALPQRVVDAVWGFFSAYALVFVVCMLALIATGMDELSAFSAVAATLNNLGPGLGEVALHFGDVNDNAKWVLIVSMLFGRLEIFTLLILLTPTFWRS
SIO_010081: VA249_RS00170
subclass of: SO_0000673
so part of: VA249_RS00170
location: 34091..35548
location: region:34091-35548:1
so has part: feature:34091-35548:1:exon

WP_221068427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34091-35548:1:exon

VA249_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: hemG
locus tag: VA249_RS00175
old locus tag: VYA_00350
so part of: sequence
location: 35558..36085
location: region:35558-36085:1
so has part: feature:35558-36085:1:exon
subclass of: SO_0000010

position:35558:1
position: 35558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36085:1
position: 36085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35558-36085:1:exon

VA249_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: hemG
locus tag: VA249_RS00175
old locus tag: VYA_00350
EC number: 1.3.5.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004736667.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: menaquinone-dependent protoporphyrinogen IX dehydrogenase
translation: MAKALFLYSSREGQTKKILHYIDEQLTDFECELVDLHNVKTIDFSQYDRVLIGASIRYGHLNKKLYQFIERNLNQLAQSKVAFFCVNLTARKEDQGKDTPEGSAYIRKFLIKSPWKPTLIGVFAGALYYPRYHWFDRTMIKFIMSMTGGETDTTKEVEYTNWEKVALFADKFKEL
SIO_010081: VA249_RS00175
subclass of: SO_0000673
so part of: VA249_RS00175
location: 35558..36085
location: region:35558-36085:1
so has part: feature:35558-36085:1:exon

WP_221068428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35558-36085:1:exon

VA249_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00180
old locus tag: VYA_r00010
so part of: sequence
location: 36588..38142
location: region:36588-38142:1
so has part: feature:36588-38142:1:exon
subclass of: SO_0000573

position:36588:1
position: 36588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38142:1
position: 38142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36588-38142:1:exon

VA249_RS00180
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1074311
locus tag: VA249_RS00180
old locus tag: VYA_r00010
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: VA249_RS00180
subclass of: SO_0000673
so part of: VA249_RS00180
location: 36588..38142
location: region:36588-38142:1
so has part: feature:36588-38142:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36588-38142:1:exon

VA249_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00185
old locus tag: VYA_t00010
so part of: sequence
location: 38233..38308
location: region:38233-38308:1
so has part: feature:38233-38308:1:exon
subclass of: SO_0000663

position:38233:1
position: 38233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38308:1
position: 38308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38233-38308:1:exon

VA249_RS00185
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1074311
locus tag: VA249_RS00185
old locus tag: VYA_t00010
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:38267..38269,aa:Glu,seq:ttc)
SIO_010081: VA249_RS00185
subclass of: SO_0000673
so part of: VA249_RS00185
location: 38233..38308
location: region:38233-38308:1
so has part: feature:38233-38308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38233-38308:1:exon

VA249_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00190
old locus tag: VYA_t00020
so part of: sequence
location: 38311..38386
location: region:38311-38386:1
so has part: feature:38311-38386:1:exon
subclass of: SO_0000663

position:38311:1
position: 38311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38386:1
position: 38386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38311-38386:1:exon

VA249_RS00190
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1074311
locus tag: VA249_RS00190
old locus tag: VYA_t00020
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:38344..38346,aa:Lys,seq:ttt)
SIO_010081: VA249_RS00190
subclass of: SO_0000673
so part of: VA249_RS00190
location: 38311..38386
location: region:38311-38386:1
so has part: feature:38311-38386:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38311-38386:1:exon

VA249_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00195
old locus tag: VYA_t00030
so part of: sequence
location: 38415..38490
location: region:38415-38490:1
so has part: feature:38415-38490:1:exon
subclass of: SO_0000663

position:38415:1
position: 38415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38490:1
position: 38490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38415-38490:1:exon

VA249_RS00195
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1074311
locus tag: VA249_RS00195
old locus tag: VYA_t00030
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:38448..38450,aa:Ala,seq:tgc)
SIO_010081: VA249_RS00195
subclass of: SO_0000673
so part of: VA249_RS00195
location: 38415..38490
location: region:38415-38490:1
so has part: feature:38415-38490:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38415-38490:1:exon

VA249_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00200
old locus tag: VYA_t00040
so part of: sequence
location: 38526..38601
location: region:38526-38601:1
so has part: feature:38526-38601:1:exon
subclass of: SO_0000663

position:38526:1
position: 38526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38601:1
position: 38601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38526-38601:1:exon

VA249_RS00200
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1074311
locus tag: VA249_RS00200
old locus tag: VYA_t00040
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:38559..38561,aa:Val,seq:tac)
SIO_010081: VA249_RS00200
subclass of: SO_0000673
so part of: VA249_RS00200
location: 38526..38601
location: region:38526-38601:1
so has part: feature:38526-38601:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38526-38601:1:exon

VA249_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00205
old locus tag: VYA_r00020
so part of: sequence
location: 38930..41822
location: region:38930-41822:1
so has part: feature:38930-41822:1:exon
subclass of: SO_0000573

position:38930:1
position: 38930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41822:1
position: 41822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38930-41822:1:exon

VA249_RS00205
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1074311
locus tag: VA249_RS00205
old locus tag: VYA_r00020
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: VA249_RS00205
subclass of: SO_0000673
so part of: VA249_RS00205
location: 38930..41822
location: region:38930-41822:1
so has part: feature:38930-41822:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38930-41822:1:exon

VA249_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rrf
locus tag: VA249_RS00210
old locus tag: VYA_r00030
so part of: sequence
location: 41915..42031
location: region:41915-42031:1
so has part: feature:41915-42031:1:exon
subclass of: SO_0000573

position:41915:1
position: 41915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42031:1
position: 42031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41915-42031:1:exon

VA249_RS00210
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1074311
gene: rrf
locus tag: VA249_RS00210
old locus tag: VYA_r00030
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: VA249_RS00210
subclass of: SO_0000673
so part of: VA249_RS00210
location: 41915..42031
location: region:41915-42031:1
so has part: feature:41915-42031:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41915-42031:1:exon

VA249_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00215
old locus tag: VYA_t00050
so part of: sequence
location: 42097..42173
location: region:42097-42173:1
so has part: feature:42097-42173:1:exon
subclass of: SO_0000663

position:42097:1
position: 42097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42173:1
position: 42173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42097-42173:1:exon

VA249_RS00215
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1074311
locus tag: VA249_RS00215
old locus tag: VYA_t00050
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:42131..42133,aa:Asp,seq:gtc)
SIO_010081: VA249_RS00215
subclass of: SO_0000673
so part of: VA249_RS00215
location: 42097..42173
location: region:42097-42173:1
so has part: feature:42097-42173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42097-42173:1:exon

VA249_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: ilvY
locus tag: VA249_RS00220
old locus tag: VYA_00360
so part of: sequence
location: complement(42334..43224)
location: region:42334-43224:-1
so has part: feature:42334-43224:-1:exon
subclass of: SO_0000010

position:42334:-1
position: 42334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43224:-1
position: 43224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42334-43224:-1:exon

VA249_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: ilvY
locus tag: VA249_RS00220
old locus tag: VYA_00360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010444829.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HTH-type transcriptional activator IlvY
translation: MNIKSLQLFIHLCDSKSFAKTAAAMHISPSALSRQIQKLEEETHQQLFLRDNRSVELTVQAKKLLPVALKILSEWQQYQSYIKGTEDDLKGEIRLFCSVTASYSHLPELISEFRIQHPFIEFKLSTGDPAQAIDKILADEADIAISAKPDQLPAKVAFEPISEIPLSVIAPVGVSSFAEELQKEEPNWSAIPFILPEAGTARDRANVWFKQMKIKPNIYAQVAGHEAIVSMVALGCGVGIAPDVVINNSPVKEKISRLKVLPIKPFELGVCCVKSQLENPLVKALWEVAECKYISL
SIO_010081: VA249_RS00220
subclass of: SO_0000673
so part of: VA249_RS00220
location: complement(42334..43224)
location: region:42334-43224:-1
so has part: feature:42334-43224:-1:exon

WP_221068429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42334-43224:-1:exon

VA249_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: ilvC
locus tag: VA249_RS00225
old locus tag: VYA_00370
so part of: sequence
location: 43367..44851
location: region:43367-44851:1
so has part: feature:43367-44851:1:exon
subclass of: SO_0000010

position:43367:1
position: 43367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44851:1
position: 44851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43367-44851:1:exon

VA249_RS00225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: ilvC
locus tag: VA249_RS00225
old locus tag: VYA_00370
EC number: 1.1.1.86
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011079096.1
GO function: GO:0004455 - ketol-acid reductoisomerase activity [Evidence IEA]
GO process: GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ketol-acid reductoisomerase
translation: MANYFNTLNLREQLDQLGRCRFMDREEFASEADYLKGKKVVIVGCGAQGLNQGLNMRDSGLDVAYALRQAAIDEQRQSFKNAKDNGFEVGSYETLIPQADLVVNLTPDKQHTNVVETVMPLMKDGAALGYSHGFNVVEEGMQIRKDLTVVMVAPKCPGTEVREEYKRGFGVPTLIAVHPENDPKGEGWDIAKAWAAATGGHRAGCLESSFVAEVKSDLMGEQTILCGMLQAGSIVCYEKMIADGIDPGYAGKLLQYGWETITEALKFGGITHMMDRLSNPAKVKAFELSEELKELMRPLYNKHMDDIITGHFSSTMMADWANDDANLLGWRAETGETAFENYPETDVEISEQEYFDNGILMVAMVRAGVELAFEAMTASGIIDESAYYESLHELPLIANTIARKRLYEMNVVISDTAEYGNYLFANVATPLLREKFMPAVNTDVIGKGLGETSNQVDNATLIAVNDAIRNHPVEYIGEELRGYMTDMKNIAVGG
SIO_010081: VA249_RS00225
subclass of: SO_0000673
so part of: VA249_RS00225
location: 43367..44851
location: region:43367-44851:1
so has part: feature:43367-44851:1:exon

WP_221068430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43367-44851:1:exon

VA249_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00230
old locus tag: VYA_00380
so part of: sequence
location: complement(45195..45446)
location: region:45195-45446:-1
so has part: feature:45195-45446:-1:exon
subclass of: SO_0000010

position:45195:-1
position: 45195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45446:-1
position: 45446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45195-45446:-1:exon

VA249_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00230
old locus tag: VYA_00380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014230445.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: accessory factor UbiK family protein
translation: MFDPKKLEQIAKQIHDSMPQPVKELGADVDQKVRQVIQGQLNKLDVVSREEFDVQTQVLLRTRQKLTEMEKKLAELEEKLADK
SIO_010081: VA249_RS00230
subclass of: SO_0000673
so part of: VA249_RS00230
location: complement(45195..45446)
location: region:45195-45446:-1
so has part: feature:45195-45446:-1:exon

WP_128812156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45195-45446:-1:exon

VA249_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: vmeD
locus tag: VA249_RS00235
old locus tag: VYA_00390
so part of: sequence
location: complement(45578..48700)
location: region:45578-48700:-1
so has part: feature:45578-48700:-1:exon
subclass of: SO_0000010

position:45578:-1
position: 45578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48700:-1
position: 48700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45578-48700:-1:exon

VA249_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: vmeD
locus tag: VA249_RS00235
old locus tag: VYA_00390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005478703.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multidrug efflux RND transporter permease subunit VmeD
translation: MRFTDVFIKRPVLAVSISFLIALLGLQAVFKMQVREYPEMTNTVVTVTTSYYGASANLIQGFITQPLEQAVAQADNIDYMTSSSVLGTSTITVNMKLNTDPNAALSDILAKTNSVRSQLPKEAEDPTVTMSTGSTTAVLYIGFTSDELSSSQITDYLERVINPQLFTVNGVSKVDLYGGMKYALRVWLDPAKMGALKLTATDVMGVLNANNYQSATGQAVGEFVLYNGSADTQVSNVAELEALVVKTGDGDVIRLGDIAKVTLEKSHDVYRASANGKEAVVAAINAAPSANPINIAADVLKLLPQLERNLPSNIKMNVMYDSTIAINESIHEVVKTILEAAVIVLVVITLFLGSFRAVIIPIVTIPLSLIGVAMVMQAMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKDGESPFRAAIIGTREIAVPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGAVFVSGIIALTLSPMMCSKMLKANEEPSKFEQKVHHILDGMTNRYEKMLKAVMAHRPVIIAFAVIVFASLPILFKFIPSELAPSEDKGVVVLMGTAPSNANLDYIQNTMNDVNKILSDQPEVEYAQVFNGVPNSNQAFGLATLKPWSEREASQAEITKRVGDLVSHVPGMSVTAFQMPELPGAGSGLPIQFVITTPNSFESLFTIASDILTNVSKSPMFVYSDLDLNYDSATMKISIDKDKAGAYGVTMQDIGVTLSTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMKNYYVRSVDGNAVPLGSLITIDVVAEPRALPHFNQLNSATVGAVPAPGVAMGDAINWFEDIAQNKLPAGYNHDYMGEARQFVTEGSALYATFGLALAIIFLVLAIQFESIRDPIVIMVSVPLAVCGALIALAWGTASMNIYSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRIDAVMEAAKVRLRPILMTTAAMIAGLIPLMYATGAGAAQRFSIGIVIVAGLAIGTLFTLFVLPVIYSYLAEKHKPLPVFVEDKDLEKLARVDEAKAAHRELAENK
SIO_010081: VA249_RS00235
subclass of: SO_0000673
so part of: VA249_RS00235
location: complement(45578..48700)
location: region:45578-48700:-1
so has part: feature:45578-48700:-1:exon

WP_128812154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45578-48700:-1:exon

VA249_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: vmeC
locus tag: VA249_RS00240
old locus tag: VYA_00400
so part of: sequence
location: complement(48712..49818)
location: region:48712-49818:-1
so has part: feature:48712-49818:-1:exon
subclass of: SO_0000010

position:48712:-1
position: 48712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49818:-1
position: 49818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48712-49818:-1:exon

VA249_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: vmeC
locus tag: VA249_RS00240
old locus tag: VYA_00400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005455175.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multidrug efflux RND transporter periplasmic adaptor subunit VmeC
translation: MKKWTFFMLLIAVLLFGSVIGFNLFKQQKIAEYMANRPEPEFPVTVTEVKAVDWVPVIEAIGFIEPNQGVTVANETSGVIDKISFHSGTSVEEGQPLVHLDSDVEKANLQSSQARLPAAQAKYKRYQGLFKKGSISKEAYDEAEANYFSLKADIESLKATIDRREIKAPFAGVVGIRNVYLGQYLQAGTDIVRLEDTSVMRLRFTVPQTDISRITLNQEVDIFVDAYPDRPFKGSISAIEPAVNVQSGLIQVQADIPNSDGKLRSGMFARANIILPKLENQVTLPQTAITFTLYGDNVYIVTEENGEKRVNQHVVKVGERTKDIAHILDGVKPGDMVVTSGQIRLSNHAKVSIVEDDSLTPPAETPML
SIO_010081: VA249_RS00240
subclass of: SO_0000673
so part of: VA249_RS00240
location: complement(48712..49818)
location: region:48712-49818:-1
so has part: feature:48712-49818:-1:exon

WP_221068431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48712-49818:-1:exon

VA249_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00245
old locus tag: VYA_00410
so part of: sequence
location: complement(49837..50418)
location: region:49837-50418:-1
so has part: feature:49837-50418:-1:exon
subclass of: SO_0000010

position:49837:-1
position: 49837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50418:-1
position: 50418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49837-50418:-1:exon

VA249_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00245
old locus tag: VYA_00410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005427239.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MSNSAAGSKYEQIIAAAERLIAESGFHGLSMHKLAAEAGVAAGTIYRYFSDKEHLLEEVRLNVTKRIAEAVQSDVHDNMSLKERYRTMWLNIWRLAGSNLDTLSSRVQYESLPCANRRNTRELERQMFAQVDRLFDQGKAEGVFKPLDNEILSGLSFEASVALARKHALGFYQLDDDALEAAIEASWDAIIKH
SIO_010081: VA249_RS00245
subclass of: SO_0000673
so part of: VA249_RS00245
location: complement(49837..50418)
location: region:49837-50418:-1
so has part: feature:49837-50418:-1:exon

WP_128812150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49837-50418:-1:exon

VA249_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rep
locus tag: VA249_RS00250
old locus tag: VYA_00420
so part of: sequence
location: 50587..52602
location: region:50587-52602:1
so has part: feature:50587-52602:1:exon
subclass of: SO_0000010

position:50587:1
position: 50587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52602:1
position: 52602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50587-52602:1:exon

VA249_RS00250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rep
locus tag: VA249_RS00250
old locus tag: VYA_00420
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005524938.1
GO function: GO:0003678 - DNA helicase activity [Evidence IEA]
GO process: GO:0006268 - DNA unwinding involved in DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA helicase Rep
translation: MKLNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKASREMKERVGQTLGKAEAKGLMVSTFHTLGLNIIKREYKHLGLKSGFSLFDDQDQLALLKELTEKQLDGDKDLLRQLLSSISNWKNDMLSPEQVKAFAKGEQQQLFAFCFEMYQKQMKAYNALDFDDLILMPVLLLRHNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGRLTVVGDDDQSIYSWRGAKPQNLVLLGQDYPKLRLIKLEQNYRSTSRILRAANILIANNPHVYEKSLFSEIPDGEKLKVLLAKNEEHEAERVTGELIAHKFLNRTNYKDYAVLYRGNHQSRLIEKSLMQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPRREIGPVTLEKLGSYANMRGKSLFESSFELGLEHHLTGRGLENLRRFTQWLVAIADQAERGDTVEAVRSLVRDIHYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNYDQEEKTLKEVVQRLTLRDMMERGEEDEDSDAVQLMTLHASKGLEFPYVYLIGSEEGILPHQTSIDEDNVEEERRLMYVGITRAQRELTFTMCKERRQFGELIKPTQSRFLDELPFDDVEWEANKKPVTQEERMAKGQAHIANLRAMFKK
SIO_010081: VA249_RS00250
subclass of: SO_0000673
so part of: VA249_RS00250
location: 50587..52602
location: region:50587-52602:1
so has part: feature:50587-52602:1:exon

WP_221068432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50587-52602:1:exon

VA249_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00255
old locus tag: VYA_00430
so part of: sequence
location: complement(52682..53095)
location: region:52682-53095:-1
so has part: feature:52682-53095:-1:exon
subclass of: SO_0000010

position:52682:-1
position: 52682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53095:-1
position: 53095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52682-53095:-1:exon

VA249_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00255
old locus tag: VYA_00430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012841248.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c5 family protein
translation: MDMSRRMISVLFAALTFSTAALASDISQTEYDAIAERIKPVGDVYLAGAEPVKAEPTGPRDGAAVYGTFCIACHSSGVSGAPKTGDAADWAPRIAQGKDVMTDHAIQGFNAMPAKGTCMDCSDDEIIAAIDHMIEGL
SIO_010081: VA249_RS00255
subclass of: SO_0000673
so part of: VA249_RS00255
location: complement(52682..53095)
location: region:52682-53095:-1
so has part: feature:52682-53095:-1:exon

WP_128812146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52682-53095:-1:exon

VA249_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00260
old locus tag: VYA_t00060
so part of: sequence
location: 53457..53533
location: region:53457-53533:1
so has part: feature:53457-53533:1:exon
subclass of: SO_0000663

position:53457:1
position: 53457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53533:1
position: 53533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53457-53533:1:exon

VA249_RS00260
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1074311
locus tag: VA249_RS00260
old locus tag: VYA_t00060
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:53491..53493,aa:Arg,seq:ccg)
SIO_010081: VA249_RS00260
subclass of: SO_0000673
so part of: VA249_RS00260
location: 53457..53533
location: region:53457-53533:1
so has part: feature:53457-53533:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53457-53533:1:exon

VA249_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00265
old locus tag: VYA_t00070
so part of: sequence
location: 53568..53643
location: region:53568-53643:1
so has part: feature:53568-53643:1:exon
subclass of: SO_0000663

position:53568:1
position: 53568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53643:1
position: 53643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53568-53643:1:exon

VA249_RS00265
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1074311
locus tag: VA249_RS00265
old locus tag: VYA_t00070
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:53601..53603,aa:His,seq:gtg)
SIO_010081: VA249_RS00265
subclass of: SO_0000673
so part of: VA249_RS00265
location: 53568..53643
location: region:53568-53643:1
so has part: feature:53568-53643:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53568-53643:1:exon

VA249_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00270
old locus tag: VYA_t00080
so part of: sequence
location: 53716..53792
location: region:53716-53792:1
so has part: feature:53716-53792:1:exon
subclass of: SO_0000663

position:53716:1
position: 53716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53792:1
position: 53792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53716-53792:1:exon

VA249_RS00270
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1074311
locus tag: VA249_RS00270
old locus tag: VYA_t00080
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:53750..53752,aa:Pro,seq:tgg)
SIO_010081: VA249_RS00270
subclass of: SO_0000673
so part of: VA249_RS00270
location: 53716..53792
location: region:53716-53792:1
so has part: feature:53716-53792:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53716-53792:1:exon

VA249_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00275
old locus tag: VYA_t00090
so part of: sequence
location: 53840..53915
location: region:53840-53915:1
so has part: feature:53840-53915:1:exon
subclass of: SO_0000663

position:53840:1
position: 53840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53915:1
position: 53915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53840-53915:1:exon

VA249_RS00275
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1074311
locus tag: VA249_RS00275
old locus tag: VYA_t00090
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:53873..53875,aa:His,seq:gtg)
SIO_010081: VA249_RS00275
subclass of: SO_0000673
so part of: VA249_RS00275
location: 53840..53915
location: region:53840-53915:1
so has part: feature:53840-53915:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53840-53915:1:exon

VA249_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00280
old locus tag: VYA_t00100
so part of: sequence
location: 53940..54016
location: region:53940-54016:1
so has part: feature:53940-54016:1:exon
subclass of: SO_0000663

position:53940:1
position: 53940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54016:1
position: 54016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53940-54016:1:exon

VA249_RS00280
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1074311
locus tag: VA249_RS00280
old locus tag: VYA_t00100
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:53974..53976,aa:Pro,seq:tgg)
SIO_010081: VA249_RS00280
subclass of: SO_0000673
so part of: VA249_RS00280
location: 53940..54016
location: region:53940-54016:1
so has part: feature:53940-54016:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53940-54016:1:exon

VA249_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00285
old locus tag: VYA_00440
so part of: sequence
location: complement(54499..55224)
location: region:54499-55224:-1
so has part: feature:54499-55224:-1:exon
subclass of: SO_0000010

position:54499:-1
position: 54499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55224:-1
position: 55224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54499-55224:-1:exon

VA249_RS00285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00285
old locus tag: VYA_00440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010650405.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD family hydrolase
translation: MLKAIFFDMDETLCGTSQADKVAGQEFANWIAQAYPQVSDSTAFVQRYLQGVYKKLNDEFPELVTLLPDENAYRCGLIQTILAEQGIEIDAEQAQQAQSFFDSARMGAFDFFPGVKEMLTELRQHFKLVVITNGPIFSQHPKLKATQMSEWVDHVIVGGEEPEEKPAASIFHKALSLVDAKPEEVIHIGDSLSADIEGANNMGILSVWVNATDVANSTEIKPSYEVKETIELNEILKTLAQ
SIO_010081: VA249_RS00285
subclass of: SO_0000673
so part of: VA249_RS00285
location: complement(54499..55224)
location: region:54499-55224:-1
so has part: feature:54499-55224:-1:exon

WP_221068433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54499-55224:-1:exon

VA249_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00290
old locus tag: VYA_00450
so part of: sequence
location: 55901..57616
location: region:55901-57616:1
so has part: feature:55901-57616:1:exon
subclass of: SO_0000010

position:55901:1
position: 55901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57616:1
position: 57616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55901-57616:1:exon

VA249_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00290
old locus tag: VYA_00450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020196662.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MSLLEVKNLRIEYPSRHGVHAAVKSLSFNIERGEIVGVVGESGAGKSTVGNAVIDLLSPPGRIASGDVYLDGEIISGLSPEAMRKVRGSKIGFIFQDPMTSLNPLFTVEQQLTETIHANMKVSDEEAYQRALSLMQQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPELIIADEPTTALDVSIQDQILNLIRELCIKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKVLGDPDHSYTRSLISAVPRSDVKLDRFPLVSYIEEATEMEPLDIKNHWLGQSQDQREYTGPLLDVKNVNLRFVTKDSLFESRREYVQASNNVSFEVHEGETFGLVGESGSGKSTIARVIAGLYEPNSGQVSFEGIDLTALKSEKARRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRFHKLTKNEAETRRIVNDLLDHVGLGKMAGVKYPHEFSGGQRQRISIARALATRPRLLICDEPTSALDVSVQAQILNLLKDLQSELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTEQLFTAPQHEYSKKLISLMPEFTGLREDIKTA
SIO_010081: VA249_RS00290
subclass of: SO_0000673
so part of: VA249_RS00290
location: 55901..57616
location: region:55901-57616:1
so has part: feature:55901-57616:1:exon

WP_221068434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55901-57616:1:exon

VA249_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00295
old locus tag: VYA_00460
so part of: sequence
location: 57722..59275
location: region:57722-59275:1
so has part: feature:57722-59275:1:exon
subclass of: SO_0000010

position:57722:1
position: 57722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59275:1
position: 59275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57722-59275:1:exon

VA249_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00295
old locus tag: VYA_00460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017631993.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MKTMKSKLAVALMAAGLSFNAMAAEIKVGYASDPVSLDPHEQLSGGTLQFSHMVFDPLVRFTQEMDFEPRLAESWERVNDTTVRFKLREGVKFHSGNDLTADDVVWTFERLQSSPDFKAIFDPYEKIVKVDDYTFDLVTKGPYPLVLQTATYIFPMDSKFYSGQTADGKDKSELVKHGNSFASTNVSGTGPFIVTSREQGVKVEFERFKDYWDKASKGNVDKLTLVPIKEDATRVAALLSGGVDMIHPVAPNDHKRVKDADGIDLVTLPGTRIITFQMNQNSNEALKDVRVRQAIVHAINNEGIVKKIMKGFATAAGQQSPVGYVGHDDKLVPRYDLKKAKQLMKEAGYENGFTLTMMAPNNRYVNDAKVAQAAAAMLSKIGIKVDLKTMPKAQYWPEFDKCAADMLMIGWHSDTEDSANFNEFLTMTRNEETGRGQYNCGYYSNPEMDKVVEAANVETDPAKRAEMLKGVEATLYNDAAFVPLHWQSEAWGAKSNVKAADIVNPMVMPYFGDLVVE
SIO_010081: VA249_RS00295
subclass of: SO_0000673
so part of: VA249_RS00295
location: 57722..59275
location: region:57722-59275:1
so has part: feature:57722-59275:1:exon

WP_221068435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57722-59275:1:exon

VA249_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00300
old locus tag: VYA_00470
so part of: sequence
location: 59422..60399
location: region:59422-60399:1
so has part: feature:59422-60399:1:exon
subclass of: SO_0000010

position:59422:1
position: 59422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60399:1
position: 60399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59422-60399:1:exon

VA249_RS00300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00300
old locus tag: VYA_00470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020196664.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MFSFLVKRLFQALIVMFVISLVAFAIQDNLGDPLRELVGQSVSEAERQALRDELGLNDPFITKYTRFVGNALQGDLGTSYFFKRPAVEVILDKLVATLELVFGATLIIILLSIPLGVYSAIHPKSIFTKFVMAMSSVGISIPVFLTAIMLMYVFSIELGWLPSYGRGETANVFGWESGFFTIDGIKHLILPCVALASIMLPLFIRLVRSEMLEVLSSEYIKFAKAKGLNLNKIYYQHALKNTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDTPLITAYVIFVGLIFVVTNTIVDLLYGIINPTVNLTGKGA
SIO_010081: VA249_RS00300
subclass of: SO_0000673
so part of: VA249_RS00300
location: 59422..60399
location: region:59422-60399:1
so has part: feature:59422-60399:1:exon

WP_128812138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59422-60399:1:exon

VA249_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00305
old locus tag: VYA_00480
so part of: sequence
location: 60402..61358
location: region:60402-61358:1
so has part: feature:60402-61358:1:exon
subclass of: SO_0000010

position:60402:1
position: 60402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61358:1
position: 61358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60402-61358:1:exon

VA249_RS00305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00305
old locus tag: VYA_00480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006713379.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MSQSNVTAAPESTPSAWERFKNSDFLYYFKRDKVAMASFTVFMMFLVLALAAPILAPTDPYDLTSIDIMDSELPPSWMDGGEERFLLGTDEQGRDILSTILYGSRLSLTIGFLAVGLQLILGIIIGLSAGYFGGRIDSFLMRFADVQLSFSTMMVAIIVSAIFKASFGSDFYSQYAVVMLVVIIGVAEWPQYARTIRASVLAEKKKEYVEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLGLPVDQPSLGALISIGFNYIFSGAWWITAFPGIVLVTLVLVINLLGDWLRDVFNPKLYKG
SIO_010081: VA249_RS00305
subclass of: SO_0000673
so part of: VA249_RS00305
location: 60402..61358
location: region:60402-61358:1
so has part: feature:60402-61358:1:exon

WP_128812136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60402-61358:1:exon

VA249_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00310
old locus tag: VYA_00490
so part of: sequence
location: 61516..62463
location: region:61516-62463:1
so has part: feature:61516-62463:1:exon
subclass of: SO_0000010

position:61516:1
position: 61516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62463:1
position: 62463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61516-62463:1:exon

VA249_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00310
old locus tag: VYA_00490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009705436.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SPOR domain-containing protein
translation: MEMKKAHLSTRIAKSSLSLGLLLVCAHYSPLAMADSVLCDASQASHSELPVLEQSCPIGKGVWGKKVPQGGNDFFWIQCGLLPKPMPLAKAKPIYSKITTDVWMKKEQSNYRCLIGPYLDFADARADLNRVKTLVDYKEAFIRVVNKSGAKAQKQTKPAPKPVPKPTANKPKVAPKTVAPVTRPDTDAFKDKPAIESKSESVISSSNVELRLETKWQGMTYAVPYFSDNQNQFYMEHGKPWNRLDYTTSEKVCQVMGMKLATVGEFKALRQSGLMEKNRWPMQLPYWGKDRKGLFADREPNQLTGTSMLNVMCVK
SIO_010081: VA249_RS00310
subclass of: SO_0000673
so part of: VA249_RS00310
location: 61516..62463
location: region:61516-62463:1
so has part: feature:61516-62463:1:exon

WP_221068436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61516-62463:1:exon

VA249_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00315
old locus tag: VYA_00500
so part of: sequence
location: complement(62552..65251)
location: region:62552-65251:-1
so has part: feature:62552-65251:-1:exon
subclass of: SO_0000010

position:62552:-1
position: 62552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65251:-1
position: 65251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62552-65251:-1:exon

VA249_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00315
old locus tag: VYA_00500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017817149.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKVSLLAASVAIALAGCGGSDGGSNAGNSGVVITGFDGYFKDAVVFEDLNNNGKLDSSDPIIDLTNEKGQVQLTNKQYSAEKNLAIQTIVPGGEVQAALIARDPNRFAGTYTVDMDNPTQAMAHEVVFRTLPGEKVISPLTDLVVIQAGANPTETAIQEAKEKVNETLGIEGNTAFTDVIAANNKALHKTAQILTESKAQAKDNYSAETSLAIADKAAEVVQKAKPEDLEDENFKPVVEVNDSGTVDVVTNSKLFANEAVVNAIKAELKPLESHTLNINLSLAAEELSLFKDQDNSDIEIAVKVVTLDGVEVTGLTATAVNGGELTISGELTPVRPAYQIKLTATDYNSEIKDKSFGSVTTAFDLQVKVENPAPTIDQEVAETIEEWIESIELFQGVEVQNEQYRIDNLFSDNDELTFDAYTSVDGLVLTLVKSAGQTELKITGKPAYVYADGQTITISAFDGVNTVYQTFELDDIEKQPEASIEIDREDLAELQSAIKSQLADLKVGEAVDVDFNITEVFEAQHTSGVIEYYAGTEDDEYVTTVPGLKVNVDTNGTLTISGTPTSATKGGSFVIAAGVNPDAEDAVISEYVTITLPNVQPADEVTPPPSETTSLEGKTWFFTEYGLVDGSDSEKGNDQIWCDSIKFDGKKVFTSAREAKNLTSCSEEVKEWEGATYTVSEDGTTVDASLPMTENGETFVAKMRYELTRSESDIAKSAATVYMQEMDDAGLNVTHSQRYTFFSDKVDLEKRLNIQSDAGWDGRVFSMYLPTNSGLKLGTVSLSMEENDPYHSDGAFDADITFDVPGEDFTCEMAKEVFRSFTLTNGENVYVSSDFGSSDFECHTSEENEVYYSTIDFDLPSLVKNDVYSFLGKTTDSGRTQVEQIKFNMEWTGVGNDD
SIO_010081: VA249_RS00315
subclass of: SO_0000673
so part of: VA249_RS00315
location: complement(62552..65251)
location: region:62552-65251:-1
so has part: feature:62552-65251:-1:exon

WP_225927092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62552-65251:-1:exon

VA249_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00320
old locus tag: VYA_00510
so part of: sequence
location: complement(65508..67055)
location: region:65508-67055:-1
so has part: feature:65508-67055:-1:exon
subclass of: SO_0000010

position:65508:-1
position: 65508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67055:-1
position: 67055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65508-67055:-1:exon

VA249_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00320
old locus tag: VYA_00510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017449356.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKRYWILTVLGTGLLGAYLLSGESQITAVAHASLTQGQVSTNADQRSLNPPLIEVKQALTTSSWSNQTSHRPTSDHLYDTNETSRDLSDSAVMPDQGMNLTQTYGDKHSKDDVASNGKPIINLSVEQQLQTIIYAWDLAQNTPINYSLSLEQLFEDPEGDLLTTRIWLENANGLNVLNQGQVMVQGAPERADITTYLAVAARDDHHGEEDHAWVTTRFELPIITEEEDDSEHPLVGDIVYRLETTQQLNGIAYTYEVVYCEAFQFLEDDVFYAASNNMRTCPETTALKKVGHYQISDDSLIVSANGARQIWTTKKVYPSKVHIGTDNYFTSVYDGKQFESYTMQKNKRSMEARLNVNTGEHEFQMIMFDYLFPIAGKGYVHGFAGNYIYDYSVFNPDMFEDVDSDLNMKIHTQDLYCSDIHRYWYSSILAGPGEFTDIVSSSVDPNNPEQPLHCGEWYDPQKQIIYSFFGLEYQDYDIFQVGEVYSYVLKPHPQFADRVEEFKINLIYHQPKAQ
SIO_010081: VA249_RS00320
subclass of: SO_0000673
so part of: VA249_RS00320
location: complement(65508..67055)
location: region:65508-67055:-1
so has part: feature:65508-67055:-1:exon

WP_221068437.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65508-67055:-1:exon

VA249_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00325
old locus tag: VYA_00520
so part of: sequence
location: complement(67059..67631)
location: region:67059-67631:-1
so has part: feature:67059-67631:-1:exon
subclass of: SO_0000010

position:67059:-1
position: 67059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67631:-1
position: 67631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67059-67631:-1:exon

VA249_RS00325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00325
old locus tag: VYA_00520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005533505.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-70 family RNA polymerase sigma factor
translation: MASQSTLTQIIQQWQDGNKQAESELYQFAYLQLRKIAHQERERNAEKYGLNNKVFSDSVNSTTALIHDAYLKMSHCDMSEIESKRDFFLMAAKVMRQILIDNARSHQAQKRQHITFMKEEDDRFEQLIIMDKALDNFSARYPRQSNALKLKYLMGMKNREICELLECSSSLIEKDLQFSRSWLQSRMAHA
SIO_010081: VA249_RS00325
subclass of: SO_0000673
so part of: VA249_RS00325
location: complement(67059..67631)
location: region:67059-67631:-1
so has part: feature:67059-67631:-1:exon

WP_128812128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67059-67631:-1:exon

VA249_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00330
old locus tag: VYA_00530
so part of: sequence
location: complement(67634..69100)
location: region:67634-69100:-1
so has part: feature:67634-69100:-1:exon
subclass of: SO_0000010

position:67634:-1
position: 67634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69100:-1
position: 69100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67634-69100:-1:exon

VA249_RS00330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00330
old locus tag: VYA_00530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020196669.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosome partitioning protein ParA
translation: MYSRSVALWLSALAIAPVWATSNSTEAKPQSTIKQGFFIDSPVTGLYYKTSSHLSGYTQKGAFQYRPGDVVSFFLGNDDKGYLLTTLSSQEVLTPTMATTKPSRSINMTRLLLSLDSTPENRQEIVLANKVLSDPQFQAQLKRLDLNLLDNAKESLNLDLVSVKEAVEHLNESQQYIEENFSSNEVIFRPKDVTFRNIIIRKKDWQGRACAFDVRHQNHPRYRPPIGEVSFTITDKTLIQHPSIGDYFKGCFLSMDNQILEDIVEPIEKFYEWEGLAGCAQRGCTRNDLNGFSLDDYNDEGDWKYRSVALNFDPTTQLLMEKVQGLGPNKHIRHSNRSEMLWFTYPDTNKNDIDYQGIWQQTQYHQQSMTQTCLLMEQKKVFTLPHASERCPTDTSLYTLDVTTDYLDMWWVNNTEPKADLAQMNVMVRWSPNPAKINYTTWEYLPAGKNWEQGILYRYQQNVSRNRDGSDSIETHTISEFVKVNEDV
SIO_010081: VA249_RS00330
subclass of: SO_0000673
so part of: VA249_RS00330
location: complement(67634..69100)
location: region:67634-69100:-1
so has part: feature:67634-69100:-1:exon

WP_221068438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67634-69100:-1:exon

VA249_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00335
old locus tag: VYA_00540
so part of: sequence
location: complement(69115..70467)
location: region:69115-70467:-1
so has part: feature:69115-70467:-1:exon
subclass of: SO_0000010

position:69115:-1
position: 69115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70467:-1
position: 70467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69115-70467:-1:exon

VA249_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00335
old locus tag: VYA_00540
EC number: 2.7.11.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020196670.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine/threonine-protein kinase
translation: MQSASSETQIYYHLLDLDESQKQEYLDELSQTQPEIYRQVQSLLACSVSEENLTQLLVFGAHQATHKEVNLCGEVIGKYRLTHELGRGGMGVVYAALRADETFEQDLAIKFIQSNLSNVLGRRALFDEAQLLARLNHPYIAKVFDGGVHNDSVYIVMERVFGQTLNTYLNTTPMQDIDKLRLFKQICQAMEHAHQHQVLHADLKPENILIDRNTRPKLLDFNLTQKVQSDGQKSPSALIAFSDKYASPEQQSGQYLTEQSDVFSLGKILALLFPTPAFWSDVYWVIRRATRIKAKQRYLNVRTLRQDIERIIESRPIEQKKHWPLYSTLRLVQRRPLPTVLSAIIVLSGVLFANTLIQKNIQLQQEKKVAEDMMYEVTRLIFHTKGRNVEQMSVSAMMELTRRRILTNPDIPKHIKQKMLLAMMTPVPDKHMTKTISCQPNCPPQKDTNE
SIO_010081: VA249_RS00335
subclass of: SO_0000673
so part of: VA249_RS00335
location: complement(69115..70467)
location: region:69115-70467:-1
so has part: feature:69115-70467:-1:exon

WP_221068439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69115-70467:-1:exon

VA249_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00340
old locus tag: VYA_00550
so part of: sequence
location: 70674..71681
location: region:70674-71681:1
so has part: feature:70674-71681:1:exon
subclass of: SO_0000010

position:70674:1
position: 70674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71681:1
position: 71681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70674-71681:1:exon

VA249_RS00340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00340
old locus tag: VYA_00550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017636149.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: substrate-binding domain-containing protein
translation: MAQQNKKNRTTLQDVADKVGVTKMTVSRYMRNPESVAQKTRIKIAEVIEELGYIENRAPAMLSKSSSKAIGILLPSLSNQIFASFVQGIETVTKANGYETLLAHFSYDEQEEEHKIASLLSYHVDGLILTESLHTPRTLQMIKNAGVPVVETMELPENPIDMAVGLDHVDASYNAVKRILASGKRTVVYFGARLDTRTKLRMQGYDRAMIEAGLEPKHVLTGEHSSFSLADGLLERALETYPDLDGVFCTNDDIAIGTLLSAQHRGIKVPDQLAVVGYNALDIGQTISPKLTSVDTPRFEIGEKSAELLIARLKGEEHAETKVDMGYRITAGESV
SIO_010081: VA249_RS00340
subclass of: SO_0000673
so part of: VA249_RS00340
location: 70674..71681
location: region:70674-71681:1
so has part: feature:70674-71681:1:exon

WP_221068440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70674-71681:1:exon

VA249_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00345
old locus tag: VYA_00560
so part of: sequence
location: 71740..72666
location: region:71740-72666:1
so has part: feature:71740-72666:1:exon
subclass of: SO_0000010

position:71740:1
position: 71740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72666:1
position: 72666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71740-72666:1:exon

VA249_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00345
old locus tag: VYA_00560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009699062.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MPHQLDALDLNLMRLLKAVVENRSIKLAAMQLGISQPSASRGVMKLKDVFDDPLFVRKAHGVEPSPMAIRLAAEFDNMLSPLEKVVQEFAEFDPLEYQGQIAIVTDPYLMDEQGQRLLRGCHQAFPQASFVFSSWNIYSQDEMLEGEHDYCILDQETELSKDIYMRPLFVEKRVILARKDHPTLSQVSNDWDTVSKLPLVSLPAPASYNPLCTVESEYRRMGYEPVVLLKSYNLRVACQMLLETDAIMYASQSTAHLMHELASYPMPMVNREFSQFVVSGGYLQTYRNHPLHRHLHRVVQQTLNTPLT
SIO_010081: VA249_RS00345
subclass of: SO_0000673
so part of: VA249_RS00345
location: 71740..72666
location: region:71740-72666:1
so has part: feature:71740-72666:1:exon

WP_221068441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71740-72666:1:exon

VA249_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00350
old locus tag: VYA_00570
so part of: sequence
location: 72869..73246
location: region:72869-73246:1
so has part: feature:72869-73246:1:exon
subclass of: SO_0000010

position:72869:1
position: 72869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73246:1
position: 73246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72869-73246:1:exon

VA249_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00350
old locus tag: VYA_00570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009705444.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SMR family transporter
translation: MLIARLFLLLAIVAEVAGTSTMSFIGESNAWEGYLVMYVLIAISYYFLSIAAKKISIGVAYATWEGLGIALITVVSMVLFDADLNTQQLFGLGLAIVGIVCVTLGESHGEPQQKDERSHSSNARC
SIO_010081: VA249_RS00350
subclass of: SO_0000673
so part of: VA249_RS00350
location: 72869..73246
location: region:72869-73246:1
so has part: feature:72869-73246:1:exon

WP_221068442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72869-73246:1:exon

VA249_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00355
old locus tag: VYA_00580
so part of: sequence
location: 73249..73578
location: region:73249-73578:1
so has part: feature:73249-73578:1:exon
subclass of: SO_0000010

position:73249:1
position: 73249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73578:1
position: 73578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73249-73578:1:exon

VA249_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00355
old locus tag: VYA_00580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005379137.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SMR family transporter
translation: MSQFFTVSFGFVVMAALVDIMANMALTRSKGFKHKGWGITSIVLVMVAFTLLAQAVKEIDLAIAYASWGAIGILGTAIGGALLFKQKLKPIGWFGIFVVIAAVVVMKTA
SIO_010081: VA249_RS00355
subclass of: SO_0000673
so part of: VA249_RS00355
location: 73249..73578
location: region:73249-73578:1
so has part: feature:73249-73578:1:exon

WP_221068443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73249-73578:1:exon

VA249_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: edd
locus tag: VA249_RS00360
old locus tag: VYA_00590
so part of: sequence
location: complement(73756..75552)
location: region:73756-75552:-1
so has part: feature:73756-75552:-1:exon
subclass of: SO_0000010

position:73756:-1
position: 73756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75552:-1
position: 75552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73756-75552:-1:exon

VA249_RS00360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: edd
locus tag: VA249_RS00360
old locus tag: VYA_00590
EC number: 4.2.1.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015296048.1
GO function: GO:0004456 - phosphogluconate dehydratase activity [Evidence IEA]
GO process: GO:0009255 - Entner-Doudoroff pathway through 6-phosphogluconate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphogluconate dehydratase
translation: MTHQVILDVTQRLVERSQEARAAFFARTEEQAKAGKGRVGLSCGNLAHAVAASCSSEKKNILDFTHSNVALISAYNDMLSAHQPYQHYPDQIKQVLSGYGHTAQVAGCVPAMCDGVTQGQAGMDMSLFSRDLIAQSTALSLSHNVFDATLLLGICDKIAPGQLMGALSYAHLPTAFVPAGLMATGISNEEKVDVRQKYAAGEVGKDALLDMECRAYHSAGTCTFYGTANTNQLVFEAMGLMLPGSAFIHPHTELRKALTDHAALKIASMNAGSANFRPLSEVVTEKSLINGIIALLASGGSTNHTIHMLAVARAAGLILTWQDISDLSEVVPLLARVYPNGPADMNAFQEAGGVPALLHRLDESGLLHRDVKPVFGEFEDQMTLPTLVDGKLTWTPCDGSQDGEVIAAPTQAFQNTGGTRVLHGNLGKAVVKVSAVKEDQRIIEAPAIVFQCQHEVEAAYKRGELNQDCIVVVTHNGPAANGMPELHKLMPILGNVQKAGFKVALVTDGRLSGASGKIPSAIHVSPEAIRGGAIGLVRNGDIIRVDCQTGELNNLNDTAGRELQVVDTEATQQTWGRSLFSVLRQSVSSAEDGASFIV
SIO_010081: VA249_RS00360
subclass of: SO_0000673
so part of: VA249_RS00360
location: complement(73756..75552)
location: region:73756-75552:-1
so has part: feature:73756-75552:-1:exon

WP_221068444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73756-75552:-1:exon

VA249_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00365
old locus tag: VYA_00600
so part of: sequence
location: complement(75549..76070)
location: region:75549-76070:-1
so has part: feature:75549-76070:-1:exon
subclass of: SO_0000010

position:75549:-1
position: 75549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76070:-1
position: 76070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75549-76070:-1:exon

VA249_RS00365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00365
old locus tag: VYA_00600
EC number: 2.7.1.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005429966.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: gluconokinase
translation: MAGSSVVVMGVCASGKTTIGEHLAEKLGRKFIDGDNLHPRANIQKMASGQPLNDDDRKPWLERIRDAAYSLESKNEHGIIVCSALKKIYRDQIREGNENVSFLFLDGSKELILERMRARQGHFMKENMVNSQFETLERPENEPRTIFVDIDATIEEVVANAAELILEQDEAMA
SIO_010081: VA249_RS00365
subclass of: SO_0000673
so part of: VA249_RS00365
location: complement(75549..76070)
location: region:75549-76070:-1
so has part: feature:75549-76070:-1:exon

WP_221068445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75549-76070:-1:exon

VA249_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00370
old locus tag: VYA_00610
so part of: sequence
location: 76223..77599
location: region:76223-77599:1
so has part: feature:76223-77599:1:exon
subclass of: SO_0000010

position:76223:1
position: 76223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77599:1
position: 77599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76223-77599:1:exon

VA249_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00370
old locus tag: VYA_00610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012126707.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntP family permease
translation: MEQLTQAPDPTFLLTIAVLAIAALLVLIIKLKVHAFASLTMVSLGTAIATGVSSDQVVPTMMNGFGGTLASVALLVGLGAMIGKILEVTGGAKVLADTLIGRFGKERAPFALGVASLLFGFPIFFDAGLVVMMPIILSVAARFGGSPIKYALPAAGAFAVMHGFVPPHPGPVAAAEFLGANIGLLLVVGILVAIPTWYLGAYLFGLYAGKKFDIPLSKAFFNGDTLVDEAKLPKFSTVMTILVLPVLLICLDTVLNTLAVAGVIDGKTALVEFLRMLGKTPVALLITLLVCLAVFAKDYGMAKLEKLCGDSLAPICGVILVTGAGGMFGGVLRASGIGDALADVLTDTGMPVIVAAFVISTCLRVAQGSATVALTTTAALIAPVVAASTGLSELDLCFIVIAIAGGATVLSHFNDSGFWLVSRLLEMDEKTTLKTWTVMETLLGGIAFIIVATLSFIL
SIO_010081: VA249_RS00370
subclass of: SO_0000673
so part of: VA249_RS00370
location: 76223..77599
location: region:76223-77599:1
so has part: feature:76223-77599:1:exon

WP_221068446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76223-77599:1:exon

VA249_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00375
old locus tag: VYA_00620
so part of: sequence
location: 77609..78220
location: region:77609-78220:1
so has part: feature:77609-78220:1:exon
subclass of: SO_0000010

position:77609:1
position: 77609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78220:1
position: 78220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77609-78220:1:exon

VA249_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00375
old locus tag: VYA_00620
EC number: 4.1.2.14
EC number: 4.1.3.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020196675.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
translation: MTTLEQRLREIKIVPVIAINDVAHALPLAKVLVENGLPCAEVTFRTEAAAESIRIMREAYPELLIGAGTVLTTEQVDIAIEAGVDFIVSPGFNPTTVKYCQQRNVTIVPGVNNPSLVEQAMEMGLRTLKFFPAEPSGGVNMLKALTAVYPVEFMPTGGVSPSNVEDYLALKSVVACGGTWMVPTAMMDSGDWDGIAELVRAVK
SIO_010081: VA249_RS00375
subclass of: SO_0000673
so part of: VA249_RS00375
location: 77609..78220
location: region:77609-78220:1
so has part: feature:77609-78220:1:exon

WP_128812108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77609-78220:1:exon

VA249_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00380
old locus tag: VYA_00630
so part of: sequence
location: complement(78710..79084)
location: region:78710-79084:-1
so has part: feature:78710-79084:-1:exon
subclass of: SO_0000010

position:78710:-1
position: 78710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79084:-1
position: 79084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78710-79084:-1:exon

VA249_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00380
old locus tag: VYA_00630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005594532.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RidA family protein
translation: MQIVFSDQAPAAVGPFSQAIKSNGMLYLSGQLPLNPETMKFASDNVTGQAEQIFKNISAVLAEAGCEKTQVVKTTVFLSDMNNFAEFNTAYAAFFEEHKPARSCVEVARLPLDALVEIELIAEL
SIO_010081: VA249_RS00380
subclass of: SO_0000673
so part of: VA249_RS00380
location: complement(78710..79084)
location: region:78710-79084:-1
so has part: feature:78710-79084:-1:exon

WP_072610207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78710-79084:-1:exon

VA249_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: metC
locus tag: VA249_RS00385
old locus tag: VYA_00640
so part of: sequence
location: complement(79132..80322)
location: region:79132-80322:-1
so has part: feature:79132-80322:-1:exon
subclass of: SO_0000010

position:79132:-1
position: 79132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80322:-1
position: 80322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79132-80322:-1:exon

VA249_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: metC
locus tag: VA249_RS00385
old locus tag: VYA_00640
EC number: 4.4.1.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017015198.1
GO function: GO:0004121 - cystathionine beta-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0006520 - amino acid metabolic process [Evidence IEA]; GO:0019346 - transsulfuration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cystathionine beta-lyase
translation: MTSKHIETKLVTAGRKPRFLQGSVNPVIQRASSLVFDSVQQKKHATANRAKGELFYGRRGTLTHFALQDAMCELEGGAGCYLYPCGAAAVSNSILAFVESGDHVLMTGAAYEPTQDFCNIVLKDMGVSTTYYDPSVGEKIAELVQDNTKVVFLESPSSITMEVQDIPGIVKAIRAINEEIIIMIDNTWAAGILFPALEFGIDISIQAGTKYIIGHSDAMLGTAVSNERCWDRLRERSYLMGQMVDADTAYVAARGLRTMGIRLAQHEQASIEVAKWLEARPEVAVVNHPALPSCKGHEFYVRDFKGCNGLFSFVLNKKLSQEELELYLDNFEHFSMAYSWGGYESLILANQPEELNAIRPANPVDFEGTLIRVHIGLENVADLIEDLEKGFDRIYK
SIO_010081: VA249_RS00385
subclass of: SO_0000673
so part of: VA249_RS00385
location: complement(79132..80322)
location: region:79132-80322:-1
so has part: feature:79132-80322:-1:exon

WP_221068447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79132-80322:-1:exon

VA249_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00390
old locus tag: VYA_00650
so part of: sequence
location: complement(80334..81569)
location: region:80334-81569:-1
so has part: feature:80334-81569:-1:exon
subclass of: SO_0000010

position:80334:-1
position: 80334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81569:-1
position: 81569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80334-81569:-1:exon

VA249_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00390
old locus tag: VYA_00650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006713387.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dicarboxylate/amino acid:cation symporter
translation: MWKKLEPYRSSIVLLLALIIGAIFGIAAPELALKVKPIGQIFLNLLFMVIVPLVSLSVMSSIASMTDLKKLGKILGLVLVISIAMAFFPALGIVGIAQMFDISQGVTIDLSQEFTGGSGGMDFVSMFTTNDFVGLLSKSNILALIIMSVLAGIATSQAGEKGKKIAELIDAANAIVMNIVGLIMKLAPVGLGAFFAATMASQDSSILAPLATVIGLLCGYMVAYYIVGACVYSYIGGGVNGVKQFWKYAAAPSITALGTCSSLGTLPVTIKTADNMGIRKDIYDICIPLFVNLNKSGVAITAAIKVVFIYAVLGLPFTFDVFAMTMVIAVLSAIIIGGVPGGAFLGEIFIVTTLGLPLEAIPVLVVIGTVCDAPATVLNVVHDLNATQIVERFMGKETQQQEQIQPVEQLA
SIO_010081: VA249_RS00390
subclass of: SO_0000673
so part of: VA249_RS00390
location: complement(80334..81569)
location: region:80334-81569:-1
so has part: feature:80334-81569:-1:exon

WP_211915633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80334-81569:-1:exon

VA249_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00395
old locus tag: VYA_00660
so part of: sequence
location: 81772..82401
location: region:81772-82401:1
so has part: feature:81772-82401:1:exon
subclass of: SO_0000010

position:81772:1
position: 81772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82401:1
position: 82401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81772-82401:1:exon

VA249_RS00395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00395
old locus tag: VYA_00660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006713388.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain-containing protein
translation: MDYLSLYEPIVDMLADFLGEDVEVVLHDLSDLEQSIYKIRNGHISGRKVGDPITNLVAKSLATDKSVDYECNYVGLSKDNKKLKCATFYIRNAEKQIVGAMCINMMVEQFVNAKRFIDSLLSGYPTFSEENQIDEHLGVSIPEMVDIRIDKVLEAYPVPIEDLSKEDKITIVTELNNEGIFLLKGTVGKVAHSLNISEPTVYKYLQQLK
SIO_010081: VA249_RS00395
subclass of: SO_0000673
so part of: VA249_RS00395
location: 81772..82401
location: region:81772-82401:1
so has part: feature:81772-82401:1:exon

WP_080535477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81772-82401:1:exon

VA249_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: gorA
locus tag: VA249_RS00400
old locus tag: VYA_00670
so part of: sequence
location: complement(82526..83881)
location: region:82526-83881:-1
so has part: feature:82526-83881:-1:exon
subclass of: SO_0000010

position:82526:-1
position: 82526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83881:-1
position: 83881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82526-83881:-1:exon

VA249_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: gorA
locus tag: VA249_RS00400
old locus tag: VYA_00670
EC number: 1.8.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017052094.1
GO function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0004362 - glutathione-disulfide reductase (NADPH) activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
GO process: GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0006749 - glutathione metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutathione-disulfide reductase
translation: MATHFDYICIGGGSGGIASANRAAMYGAKVALIEAQDLGGTCVNVGCVPKKVMWHGAQVAEAMNLYAEDYGFDVDVKGFDWSKLVESRQAYIGRIHQSYDRVLGNNKVNVIKGFAKFVDEKTVEVNGEHYTADHILIAVGGRPTIPNIPGAEYGIDSNGFFELAEQPKRVAVIGAGYIAVEIAGVLHALGTETHLFVRKESPLRSFDPMIIETLVEVMDAEGPTLHTHSVPKEVVKEADGSLTLHLENGESQNVDTLIWAIGRHPATDAINLASTGVATNDRGYIKVDEYQETNVKGIYCVGDIMEGGIELTPVAVKAGRQLSERLFNNKPNAKMDYDLVPTVVFSHPPIGTIGLTTQEAEEKYGKDNIKVYTSGFTAMYTAVTKHRQPCKMKLVCAGEEETVVGLHGIGFTVDEMIQGFGVAMKMGATKADFDSVVAIHPTGSEEFVTMR
SIO_010081: VA249_RS00400
subclass of: SO_0000673
so part of: VA249_RS00400
location: complement(82526..83881)
location: region:82526-83881:-1
so has part: feature:82526-83881:-1:exon

WP_005429991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82526-83881:-1:exon

VA249_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00405
old locus tag: VYA_00680
so part of: sequence
location: complement(84202..85041)
location: region:84202-85041:-1
so has part: feature:84202-85041:-1:exon
subclass of: SO_0000010

position:84202:-1
position: 84202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85041:-1
position: 85041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84202-85041:-1:exon

VA249_RS00405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00405
old locus tag: VYA_00680
EC number: 2.1.1.266
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000954220.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ
translation: MLSYRHSFHAGNHADVVKHIVQSLILDALKQKDKPFVYHDTHSGVGRYDLTHEWSEKTGEYKQGIARIWDNPNIPEDIASYIDSIKTLNNGENLRYYPGSPRVARAQIRPQDRMILTELHPADHPLLEQEFHRDRQVSIYKEDGFKRLKGSLPPQERRGLVLIDPPYELAKEYRDVVQAIHQSYKRWATGIYAIWYPVVNRCDIEDMIEGLEGLGIRKILQIELGVSPDTNERGMTASGMIVINPPWKLESQMKEILPFLQEAIAPATGHWKVDWIVPE
SIO_010081: VA249_RS00405
subclass of: SO_0000673
so part of: VA249_RS00405
location: complement(84202..85041)
location: region:84202-85041:-1
so has part: feature:84202-85041:-1:exon

WP_221068448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84202-85041:-1:exon

VA249_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: prlC
locus tag: VA249_RS00410
old locus tag: VYA_00690
so part of: sequence
location: 85448..87490
location: region:85448-87490:1
so has part: feature:85448-87490:1:exon
subclass of: SO_0000010

position:85448:1
position: 85448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87490:1
position: 87490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85448-87490:1:exon

VA249_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: prlC
locus tag: VA249_RS00410
old locus tag: VYA_00690
EC number: 3.4.24.70
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020196690.1
GO function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oligopeptidase A
translation: MSNPLLTFTDLPPFSQIKPEYIKPAVEQAIADCRAKVDEVLKDNANPSWASVIAPIEEIDDRLSRIWSPVGHMNSVVNSEALREAYESCLPILSEYGTWVGQHKGLYEAYKSIKASEEFANLTRAQQKTITDSLRDFELSGIGLPADEQHRYGEISKRMSELSSKFSNNVLDATMGWTKHITDEKDLAGMPESALAAAKAAAEAKELDGYLITLDIPSYLPVMTYCDNQDLRKEVYEAYVTRASDRGPNAGKWDNSEIITEQLKLRHEISRMLGFNTYSEKSLATKMAENPAQVLGFLNDLATKAKPQGEREIEELRQFANAEFGVSELNVWDIAYYSEKQKQHLFQISDEELRPYFPESKAVSGLFEVLNRVFGMTVTEREGVDTWHESVRFFDIFDDKGTLRGSFYLDLYAREHKRGGAWMDDCRGRRVTQSGELQTPVAYLTCNFNRPVGDKPALFTHDEVVTLFHEFGHGIHHMLTRVETGAVSGINGVPWDAVELPSQFLENWCWEEDALAFISGHYETGEPLPKAMLDKMLAAKNFQSAMGILRQLEFGLFDFTLHTEYDPEVGARVLETLAEVKEKVAVVPAVEWARFSHSFGHIFAGGYSAGYYSYLWAEVLSSDAFSRFEEEGIFNKETGLSFLNNILEMGGSEEPMELFKRFRGREPEIDALLRHSGIAA
SIO_010081: VA249_RS00410
subclass of: SO_0000673
so part of: VA249_RS00410
location: 85448..87490
location: region:85448-87490:1
so has part: feature:85448-87490:1:exon

WP_221068449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85448-87490:1:exon

VA249_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: asnC
locus tag: VA249_RS00415
old locus tag: VYA_00700
so part of: sequence
location: complement(87584..88048)
location: region:87584-88048:-1
so has part: feature:87584-88048:-1:exon
subclass of: SO_0000010

position:87584:-1
position: 87584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88048:-1
position: 88048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87584-88048:-1:exon

VA249_RS00415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: asnC
locus tag: VA249_RS00415
old locus tag: VYA_00700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017055560.1
GO function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator AsnC
translation: MNVSLPKLDDLDRAILKTLMADARTPYAEMAKQFDVSPATIHVRIEKMKAADIIEGTEVIVNTKKLGYDVCCFIGINLNAARDYHSALEKLNALDEVVEAYYTTGAYNIFVKLMCKSIEELQFVLIDKLQAIDEVQSTETLISLQNPINRNVNP
SIO_010081: VA249_RS00415
subclass of: SO_0000673
so part of: VA249_RS00415
location: complement(87584..88048)
location: region:87584-88048:-1
so has part: feature:87584-88048:-1:exon

WP_128812348.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87584-88048:-1:exon

VA249_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00420
old locus tag: VYA_00710
so part of: sequence
location: 88231..89010
location: region:88231-89010:1
so has part: feature:88231-89010:1:exon
subclass of: SO_0000010

position:88231:1
position: 88231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89010:1
position: 89010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88231-89010:1:exon

VA249_RS00420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00420
old locus tag: VYA_00710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017821114.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MQLQLICEDPSQQSHLDELAARWQLSHTDDSDFALVLTTERLELRKVDEPKLGAIFVDLIGGAVGHRRKFGGGKGQAIAKAAGLNKGATPTVLDGTAGLGRDAFVLASLGCKVQMVERHPVVAALLDDGLARAKHDPEIGTWVSERMSLIHASSHDALEQLAQDKDFVQPDVVYLDPMYPHPENKKKSALVKKEMRVFQSLVGADLDADGLLAPAMSLATKRVVVKRPDYANWLDEQKPSMAIETKKNRFDVYVKASMA
SIO_010081: VA249_RS00420
subclass of: SO_0000673
so part of: VA249_RS00420
location: 88231..89010
location: region:88231-89010:1
so has part: feature:88231-89010:1:exon

WP_221068450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88231-89010:1:exon

VA249_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00425
old locus tag: VYA_00720
so part of: sequence
location: 89252..89851
location: region:89252-89851:1
so has part: feature:89252-89851:1:exon
subclass of: SO_0000010

position:89252:1
position: 89252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89851:1
position: 89851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89252-89851:1:exon

VA249_RS00425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00425
old locus tag: VYA_00720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009705452.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKRLCKMNRKQIADNLGDIHRLVVAPKFVCRSCARSSASKDTLCKPAAIPPQKCQDKLLSEQQACGLLAEALPTSSLTQDTSIIMTSDQSAEKAAIVKRVVERVKEKKLAAKVAAVTSTTKLEAPAMFDLSDKKALKKAKKAVKKHYKQQKKLLKLAKKQQKLLKRQRKLEARNAKLEVLLPTPPNTLMSTSSQAKVH
SIO_010081: VA249_RS00425
subclass of: SO_0000673
so part of: VA249_RS00425
location: 89252..89851
location: region:89252-89851:1
so has part: feature:89252-89851:1:exon

WP_221068451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89252-89851:1:exon

VA249_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00430
old locus tag: VYA_00730
so part of: sequence
location: complement(89923..90801)
location: region:89923-90801:-1
so has part: feature:89923-90801:-1:exon
subclass of: SO_0000010

position:89923:-1
position: 89923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90801:-1
position: 90801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89923-90801:-1:exon

VA249_RS00430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00430
old locus tag: VYA_00730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005382935.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carboxylate/amino acid/amine transporter
translation: MAYLSAVTLLWAFSFSLIGVYLAGQVDSWFSVFMRIALASVVFIPFLKFRGVSKSLIVKLMIVGGFQLGLMYCFYYQSFLLLSVPEVLLFTVFTPIYVTLIYDFLKGRFSPWYLVTAAIAVLGAAWIKFAGINENFLMGFLVVQGANLCFAIGQVGYKYIMETESVELPQHTVFGYFYLGALCVATIAFALMGNLDKMPTTATQWGILTYLGLIASGFGYFAWNKGATMVNAGALAVMNNALVPAGLIVNIVIWNRDVDVMRLAVGGAIIMLSLWINETWVKKRVEMSYASK
SIO_010081: VA249_RS00430
subclass of: SO_0000673
so part of: VA249_RS00430
location: complement(89923..90801)
location: region:89923-90801:-1
so has part: feature:89923-90801:-1:exon

WP_221068452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89923-90801:-1:exon

VA249_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: uspA
locus tag: VA249_RS00435
old locus tag: VYA_00740
so part of: sequence
location: complement(90872..91297)
location: region:90872-91297:-1
so has part: feature:90872-91297:-1:exon
subclass of: SO_0000010

position:90872:-1
position: 90872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91297:-1
position: 91297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90872-91297:-1:exon

VA249_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: uspA
locus tag: VA249_RS00435
old locus tag: VYA_00740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020331882.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: universal stress protein UspA
translation: MSYKHILVAVDLSDDSKVLIKKAVSLAKPLEAKVSFIHIDVNYAELYTGLIDINMAEAQHQAMEASRTQLANFEEYAEYPITHTLVGSGDLSNELCDTIQEYNFDMVVCGHHQDFWSKILSSTRQLINCSPVDMLVVPLKD
SIO_010081: VA249_RS00435
subclass of: SO_0000673
so part of: VA249_RS00435
location: complement(90872..91297)
location: region:90872-91297:-1
so has part: feature:90872-91297:-1:exon

WP_211915629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90872-91297:-1:exon

VA249_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: ftnA
locus tag: VA249_RS00440
old locus tag: VYA_00750
so part of: sequence
location: 91507..92034
location: region:91507-92034:1
so has part: feature:91507-92034:1:exon
subclass of: SO_0000010

position:91507:1
position: 91507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92034:1
position: 92034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91507-92034:1:exon

VA249_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: ftnA
locus tag: VA249_RS00440
old locus tag: VYA_00750
EC number: 1.16.3.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004735556.1
GO function: GO:0008199 - ferric iron binding [Evidence IEA]
GO process: GO:0006879 - cellular iron ion homeostasis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: non-heme ferritin
translation: MLSQTMVEQLNEQINLEFFSSNLYLQMSAWCEDKGFEGAAEFLRAHAVEEMEHMQRLFTYVSETGSMPILGAIEAPKHDFASLGDVFRETYEHEQMITEKINKLAHVAFTSQDYSTFNFLQWYVAEQHEEEKLFKGILDKIELVGEDGKALFFIDKDLAQMAKEGSSSIMGAPAV
SIO_010081: VA249_RS00440
subclass of: SO_0000673
so part of: VA249_RS00440
location: 91507..92034
location: region:91507-92034:1
so has part: feature:91507-92034:1:exon

WP_128812094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91507-92034:1:exon

VA249_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: uspB
locus tag: VA249_RS00445
old locus tag: VYA_00760
so part of: sequence
location: 92123..92446
location: region:92123-92446:1
so has part: feature:92123-92446:1:exon
subclass of: SO_0000010

position:92123:1
position: 92123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92446:1
position: 92446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92123-92446:1:exon

VA249_RS00445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: uspB
locus tag: VA249_RS00445
old locus tag: VYA_00760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011079133.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: universal stress protein UspB
translation: MISGDTILFALMVVTAVNMVRYFTALRSLIYIMREAHPLLYQQVDGNGFFTTHGNVTKQVRLFHYIKSKEYHHHHDGLFTDKCERVRELFILSTALLGVTLLAAFIL
SIO_010081: VA249_RS00445
subclass of: SO_0000673
so part of: VA249_RS00445
location: 92123..92446
location: region:92123-92446:1
so has part: feature:92123-92446:1:exon

WP_128812092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92123-92446:1:exon

VA249_RS00450
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00450
old locus tag: VYA_00770
so part of: sequence
location: 92622..93815
location: region:92622-93815:1
so has part: feature:92622-93815:1:exon
subclass of: SO_0000010

position:92622:1
position: 92622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93815:1
position: 93815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92622-93815:1:exon

VA249_RS00450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00450
old locus tag: VYA_00770
EC number: 1.14.13.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006713180.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MSKKFDVVVIGAGAAGLMCAAEAGKRGRHVLVLDNAKKPGRKILISGGGRCNFTNYDVSSNNYLCQNPHFVKSALSQYTNWDFISMVSKHGIEFEERDHGQLFCVDAFTAKDIVKMLLAECDMPNIQQRYQCDVHSIEKTDDGFRLHAGTESIECESLVVATGGLSMPKLGATPFGYKIAEQFEIPVITTTAGLVPFTLHKEDKEDFAELSGIAIPAEITAQDGTMFKEALLFTHRGLSGPSVLQISSFWKAGQKVTINLVPNDDIAELLECSREKHPNQSLKNTLAKVLPKRLVEVLIERKELADKPLKQFNPKEMAAIVERLENWAVAPNGTEGYRTAEVTLGGVDTDHLSSKTMECKNIKGLYFIGEVIDVTGWLGGYNFQWCWSSGFVAGQWA
SIO_010081: VA249_RS00450
subclass of: SO_0000673
so part of: VA249_RS00450
location: 92622..93815
location: region:92622-93815:1
so has part: feature:92622-93815:1:exon

WP_221068453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92622-93815:1:exon

VA249_RS00455
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00455
old locus tag: VYA_00780
so part of: sequence
location: complement(93899..96346)
location: region:93899-96346:-1
so has part: feature:93899-96346:-1:exon
subclass of: SO_0000010

position:93899:-1
position: 93899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96346:-1
position: 96346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93899-96346:-1:exon

VA249_RS00455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00455
old locus tag: VYA_00780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010650452.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GGDEF and EAL domain-containing protein
translation: MFRFAVSSDLLSTWKHALHHFCGRFQAQGLLFAHDYTHQWQFSEISTTDIHQEDIVALLQSMTKQFKAPSLAVERINFSGQTLSFCPIWQPNGTLFAAIALVHNNEHSTEVTIDLSALCGRIGFDIGVIFHQEQLRNQQPVNTTLPSLQEFVDGLDDHTWIKSINGEYVLTSRTVEEAWNMKSTDIIGKKDRELFTPARAQQFMDADQEVIATGRQHTVEECSQVDGSNKPIWLETIKSPIRNQAGELIGILGMTRNVTRRKTVENQLSLASTIFNHSHEGMMITDRTANILEINSAFTRITGFTAEEAIGQKPNIIRSGHHDPDFYTELWRQLKTTGQWKGEFVNRRKDGSVYPQLATISTVVDESSHLVNYICVFEDISVRKAHEEKLQRMAFYDPLTSLPNRTQLLSLLEQHIESGRKHHHSFATLFLDIDHFKHINDSLGHFYGDQLLTKLAERLQDVLHRQAHVARIGGDEFVIILPNIQSKSRLIDAVEEVLNLFNRPFKVGQNESLRVSTSIGIACYPQDGQDSETLLKNADTAMYLAKKNGRNGYAFYSPDLTDKSISHVRLQSALHEAIEKNELYLVYQPQYQIQNHKVVGVEALLRWDHPELGSVSPAEFIPIAEKTGLIQVIGPWVMKEACRQGKDWLDQGIDFGKMAINVSALQLQKPGFIQRLKDILQQTQFPADRIDLEITESYLLNDPLHAIESLNQLRQLGVEISLDDFGTGYSSLSYLKGLPINKLKVDRSFVSDVPSNNDSNAIVNAIIAMGKTLSLTVIAEGIETAQQAQYLHERGCLYGQGYRFSAPVSPEALFK
SIO_010081: VA249_RS00455
subclass of: SO_0000673
so part of: VA249_RS00455
location: complement(93899..96346)
location: region:93899-96346:-1
so has part: feature:93899-96346:-1:exon

WP_221068454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93899-96346:-1:exon

VA249_RS00460
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00460
old locus tag: VYA_00790
so part of: sequence
location: complement(96535..97443)
location: region:96535-97443:-1
so has part: feature:96535-97443:-1:exon
subclass of: SO_0000010

position:96535:-1
position: 96535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97443:-1
position: 97443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96535-97443:-1:exon

VA249_RS00460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00460
old locus tag: VYA_00790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020195462.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MNERRALGFGLSAVLLWSTVATAFKLTLAEFSPIQMLTMASIVSAIALTIVCGVQGKLNQLSATFLSNPWYYLLLGLINPLAYYLILFKAYDLLPASQAQAINYSWAITLTLMAAMFLGQKIRGKDWIACCFSYAGVIVIATKGNVLGMDFESPLGVCLALLSTLLWASYWILNTKNKADPVIGVLLGFLVAIPFAVGLSLYEGASWGQISTKGWAAVTYVGLFEMGVTFVLWLTALKLTENTARISNLIFASPFISLALLATIIGEEIHPSTLMGLVMIISGLVIQQVRFGKSRQVTETAQ
SIO_010081: VA249_RS00460
subclass of: SO_0000673
so part of: VA249_RS00460
location: complement(96535..97443)
location: region:96535-97443:-1
so has part: feature:96535-97443:-1:exon

WP_221068455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96535-97443:-1:exon

VA249_RS00465
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rmuC
locus tag: VA249_RS00465
old locus tag: VYA_00800
so part of: sequence
location: 97670..99202
location: region:97670-99202:1
so has part: feature:97670-99202:1:exon
subclass of: SO_0000010

position:97670:1
position: 97670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99202:1
position: 99202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97670-99202:1:exon

VA249_RS00465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rmuC
locus tag: VA249_RS00465
old locus tag: VYA_00800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019826535.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA recombination protein RmuC
translation: MQWILEHQSLILSSLFAATTSGIAVGWWVKQRFAMQTQLLEQQLHSEKQFHQQQLEQAKQSLADAQQELDELDDERDKAAFEVRQTHGKLMAAMEKLRYFEAVKQERQQYFDELGQMREHKSRLETQLGEQQARHEQINQANAEKLQILEQAEARLKQQFEHLANQLFEEKTAKVDIQNRQSLEGLLSPLKEQLEGFKKQVNDSFSQEAKERHTLVHELKNLQRLNEHMTREAVNLTQALKGDNKQQGNWGEVVLARVLAESGLREGHEYQTQVSLQNEAGKRYQPDVIVHLPQNKQVVVDSKMALVAYERYFNAETDTQRDQALSDHLSALRAHIRGLSLKDYHQLKGIQSLDYVLMFIPVEPAFQVAIQADPSLVKDAMEQNIILVSPTTLLVALRTIDNLWRNERQNENAQLIAERAAKLYDKLRLFIDDMEGLGGALDKANQTYQGAMNKLATGRGNVIRQAESFKQLGVEVKRPISPELSQLAQSESFSENASLVERHPAEDKVN
SIO_010081: VA249_RS00465
subclass of: SO_0000673
so part of: VA249_RS00465
location: 97670..99202
location: region:97670-99202:1
so has part: feature:97670-99202:1:exon

WP_221068456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97670-99202:1:exon

VA249_RS00470
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: ubiE
locus tag: VA249_RS00470
old locus tag: VYA_00810
so part of: sequence
location: 99281..100060
location: region:99281-100060:1
so has part: feature:99281-100060:1:exon
subclass of: SO_0000010

position:99281:1
position: 99281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100060:1
position: 100060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99281-100060:1:exon

VA249_RS00470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: ubiE
locus tag: VA249_RS00470
old locus tag: VYA_00810
EC number: 2.1.1.163
EC number: 2.1.1.201
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020331899.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE
translation: MTDTSVQSNTALENETTHFGFTTVAKDEKVTKVAEVFHSVAAKYDIMNDLMSGGIHRLWKRFTIDCSGARPGQRVLDLGGGTGDLTAKFSRIVGDQGHVILADINNSMLNVGRDKLRDNGIVGNVHYVQANAEELPFPDDYFDVITISFCLRNVTDKDKALRSMFRVLKPGGRLLVLEFSKPILDPLSKVYDAYSFHLLPKMGELVANDADSYRYLAESIRMHPDQDTLESMMIEAGFENTKYYNLTGGIVALHRGYKF
SIO_010081: VA249_RS00470
subclass of: SO_0000673
so part of: VA249_RS00470
location: 99281..100060
location: region:99281-100060:1
so has part: feature:99281-100060:1:exon

WP_221068457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99281-100060:1:exon

VA249_RS00475
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00475
old locus tag: VYA_00820
so part of: sequence
location: 100072..100707
location: region:100072-100707:1
so has part: feature:100072-100707:1:exon
subclass of: SO_0000010

position:100072:1
position: 100072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100707:1
position: 100707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100072-100707:1:exon

VA249_RS00475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00475
old locus tag: VYA_00820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005394440.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SCP2 domain-containing protein
translation: MPFEPLITAVIETTLNTLIKDDPELGRRLSRLKGQVIQIHLKEINKTLTFIFSQQIDVLGHYEGQPDCYLSLNLSVLPELRDQANITRLIKQDKLELEGDIQLAQKFSQLMVDCKPDIEEWLSRVTGDVVAHTVVQGTKNVGRFFASQADKHQRHLAQVVTEEWKLAPAPLEVAYFCDQVDDVRSQASRVEARLNALLNKLDTDKPALEQP
SIO_010081: VA249_RS00475
subclass of: SO_0000673
so part of: VA249_RS00475
location: 100072..100707
location: region:100072-100707:1
so has part: feature:100072-100707:1:exon

WP_221068458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100072-100707:1:exon

VA249_RS00480
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: ubiB
locus tag: VA249_RS00480
old locus tag: VYA_00830
so part of: sequence
location: 100704..102338
location: region:100704-102338:1
so has part: feature:100704-102338:1:exon
subclass of: SO_0000010

position:100704:1
position: 100704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102338:1
position: 102338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100704-102338:1:exon

VA249_RS00480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: ubiB
locus tag: VA249_RS00480
old locus tag: VYA_00830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005529019.1
GO process: GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ubiquinone biosynthesis regulatory protein kinase UbiB
translation: MTPTEIKRLYHIIKVQLEYGLDELLPEHQLTKAPLLMRKSLFWIKNQHPEKPLGERLRLALQELGPVWIKFGQMMSTRRDLFPPHIADPLALLQDRVASFDGQLAKEQMELALGGPLENWFTEFDIKPLASASIAQVHTARLKGTGQEVVLKVIRPDIRPVIDSDLKLMHRMARIVARAMPEARRLKPVEVVREYEKTLLDELDLRREAANAIQLRRNFEGSEELYVPEVFPDFSNETVMVSERIYGIQVSDIEGLEANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVKPEHPENPMWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAELHVDSGWVPADTNVDEFEFAIRIVCEPIFAKPLCEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGLGRQLYPQLDLWETAKPFLEEWMMNQVGPQALVNAIKDRAPFWAEKLPELPELLYDSLKQGKAMNQRMDQLYQGYRQSKRQQATGKFLFGVGATLVVCSAILVDHAYEQLSVASGIAGVTFWLLSWRAYRR
SIO_010081: VA249_RS00480
subclass of: SO_0000673
so part of: VA249_RS00480
location: 100704..102338
location: region:100704-102338:1
so has part: feature:100704-102338:1:exon

WP_221068459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100704-102338:1:exon

VA249_RS00485
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: tatA
locus tag: VA249_RS00485
old locus tag: VYA_00840
so part of: sequence
location: 102387..102635
location: region:102387-102635:1
so has part: feature:102387-102635:1:exon
subclass of: SO_0000010

position:102387:1
position: 102387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102635:1
position: 102635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102387-102635:1:exon

VA249_RS00485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: tatA
locus tag: VA249_RS00485
old locus tag: VYA_00840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020331902.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Sec-independent protein translocase subunit TatA
translation: MGGISVWQLLIIAVIVVLLFGTKKLRGIGGDLGGAVKGFKKAMSEDDSAKKEEKDADFEPKSLEKQQQKEAAPETKKDKEQA
SIO_010081: VA249_RS00485
subclass of: SO_0000673
so part of: VA249_RS00485
location: 102387..102635
location: region:102387-102635:1
so has part: feature:102387-102635:1:exon

WP_099079135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102387-102635:1:exon

VA249_RS00490
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: tatB
locus tag: VA249_RS00490
old locus tag: VYA_00850
so part of: sequence
location: 102639..103040
location: region:102639-103040:1
so has part: feature:102639-103040:1:exon
subclass of: SO_0000010

position:102639:1
position: 102639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103040:1
position: 103040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102639-103040:1:exon

VA249_RS00490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: tatB
locus tag: VA249_RS00490
old locus tag: VYA_00850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010433478.1
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Sec-independent protein translocase protein TatB
translation: MFDIGFWELVLISVVGLVVLGPERLPHAIRSVSRFVGAAKSMANSVKDELSHELKVQELQENLRKAEQMGMEDLSPELKSSVDELKKAAQSVNRPYAEPTKSDAEPTKHEASATEGVEKAEEIKVTAADKKAE
SIO_010081: VA249_RS00490
subclass of: SO_0000673
so part of: VA249_RS00490
location: 102639..103040
location: region:102639-103040:1
so has part: feature:102639-103040:1:exon

WP_221068460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102639-103040:1:exon

VA249_RS00495
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: tatC
locus tag: VA249_RS00495
old locus tag: VYA_00860
so part of: sequence
location: 103107..103853
location: region:103107-103853:1
so has part: feature:103107-103853:1:exon
subclass of: SO_0000010

position:103107:1
position: 103107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103853:1
position: 103853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103107-103853:1:exon

VA249_RS00495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: tatC
locus tag: VA249_RS00495
old locus tag: VYA_00860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005429982.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Sec-independent protein translocase subunit TatC
translation: MSTVEQTQPLISHLLELRNRLLRAILAVLVVFVGLIYFSNHIYEFVSAPLVERLPEGATMIATDVASPFFTPLKLTLIASVFIAVPFILYQVWAFVAPGLYKHERRLIMPLLFSSSLLFYCGVAFAYFVVFPLVFGFFTAISLGGVEFATDISSYLDFVLALFMAFGIAFEVPVAIILLCWTGATTPQDLREKRPYIIVGAFVVGMLLTPPDIISQTLLAIPMCLLFEVGLFFARFYTRKDEEAEVEE
SIO_010081: VA249_RS00495
subclass of: SO_0000673
so part of: VA249_RS00495
location: 103107..103853
location: region:103107-103853:1
so has part: feature:103107-103853:1:exon

WP_128812075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103107-103853:1:exon

VA249_RS00500
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00500
old locus tag: VYA_00870
so part of: sequence
location: complement(103922..104683)
location: region:103922-104683:-1
so has part: feature:103922-104683:-1:exon
subclass of: SO_0000010

position:103922:-1
position: 103922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104683:-1
position: 104683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103922-104683:-1:exon

VA249_RS00500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00500
old locus tag: VYA_00870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005379240.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TatD family hydrolase
translation: MIDTHAHIYASEFDNDRDEVVTRALAQGISKILLPNIDLDSIEPMLKTEATYPEICRSMMGLHPCYVDGNVEQTLAIIRSWFEKHKFIAVGEIGIDLYWDKTFRAEQEMAFITQLNWAKEMDLPVVIHTRDSIEETLALLRQEQDGRLRGVFHCFGGSVEEAQAINELGFHLGIGGVSTFKNGGMDKVIPHLDMDWVILETDCPYLAPVPHRGKRNEPAYTSLVAARVAELTNSNIEELDRITTQNATALFRL
SIO_010081: VA249_RS00500
subclass of: SO_0000673
so part of: VA249_RS00500
location: complement(103922..104683)
location: region:103922-104683:-1
so has part: feature:103922-104683:-1:exon

WP_221068461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103922-104683:-1:exon

VA249_RS00505
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: hemB
locus tag: VA249_RS00505
old locus tag: VYA_00880
so part of: sequence
location: 104870..105931
location: region:104870-105931:1
so has part: feature:104870-105931:1:exon
subclass of: SO_0000010

position:104870:1
position: 104870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105931:1
position: 105931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104870-105931:1:exon

VA249_RS00505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: hemB
locus tag: VA249_RS00505
old locus tag: VYA_00880
EC number: 4.2.1.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005429984.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO process: GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: porphobilinogen synthase
translation: MSVSIQGPFPARRMRRMRKHDFSRRLMAENQLSVNDLIYPMFVLMGKDRRESVESMPGVERLSIDLMLEEAHYLASLGVPAIALFPVVNQDAKSLCAAEAYNPEGLVQRAVRELKEHVPQMGVITDVALDPFTTHGQDGIIDENGYVMNDETTEVLIKQALSHAEAGADVVAPSDMMDGRIGKIREALEEAGHIHTQIMAYSAKYASNYYGPFRDAVGSASNLKGGNKKNYQMDPANSDEALHEVALDINEGADMVMVKPGMPYLDVVRRVKTELQVPTFAYQVSGEYAMHKAAIMNGWLKERETVLESLLCFKRAGADGILTYFAKDVAEWLAEENAQAAQHLVKAQQAAEE
SIO_010081: VA249_RS00505
subclass of: SO_0000673
so part of: VA249_RS00505
location: 104870..105931
location: region:104870-105931:1
so has part: feature:104870-105931:1:exon

WP_221069759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104870-105931:1:exon

VA249_RS00510
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00510
old locus tag: VYA_00890
so part of: sequence
location: 106056..106490
location: region:106056-106490:1
so has part: feature:106056-106490:1:exon
subclass of: SO_0000010

position:106056:1
position: 106056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106490:1
position: 106490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106056-106490:1:exon

VA249_RS00510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00510
old locus tag: VYA_00890
EC number: 2.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017189946.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MTMLIREGTLEEAIQVVARVTEFARGETVESMAARLGDKKSLILVAEKAGTILGFKIGYELDDYTFYSWFGGVAPEVRNEGVAQMLLEAQEDWVSEQGYKMLKVKSRNQFPAMLRLLLRNDYIIEKFEEKPNLRESRVHFIKAV
SIO_010081: VA249_RS00510
subclass of: SO_0000673
so part of: VA249_RS00510
location: 106056..106490
location: region:106056-106490:1
so has part: feature:106056-106490:1:exon

WP_221068462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106056-106490:1:exon

VA249_RS00515
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: polA
locus tag: VA249_RS00515
old locus tag: VYA_00900
so part of: sequence
location: 107094..109883
location: region:107094-109883:1
so has part: feature:107094-109883:1:exon
subclass of: SO_0000010

position:107094:1
position: 107094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109883:1
position: 109883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107094-109883:1:exon

VA249_RS00515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: polA
locus tag: VA249_RS00515
old locus tag: VYA_00900
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010444938.1
GO function: GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO process: GO:0006261 - DNA-templated DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase I
translation: MASIPENPLILIDGSSYLYRAFHAYPGTMSNGEIPTNAVYGVVNMLRSMMRQFASDRIAVVFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLICIPGVEADDVIGTLAYQASQQGMPVLISTGDKDMAQLVDDNIILINTMTNVVMDREGVIEKFGIPPELIIDYLALMGDKVDNIPGVPGVGDKTATALLQGIGGLTKLYENLDDIAALGFRGSKTMAKKLVDNKDNAMLSYELATIKLDVELEETPESLLKAEPSKDELIKLYGQLTFKSWLNELLDGGSGVVEADESTGAVRGSSASKADMDTSAVKIDRSQYETILDEASFMAWLDKLKASDLFAFDTETDSLDYMVANLVGLSFAIDEGIAAYVPVAHDYLDAPQQLDREWVLAQLKPILEDETQAKVGQNLKYDASVLARYGIEMKGIKHDTMLASYVYNSVGGKHDMDSLALRFLQHSCISFEQIAGKGKNQLTFNQIELDEASPYAAEDADVTLRLHNRLVANLEQDDKLKAVYEEIEMPLVPVLSRIERTGVLIDDMKLSTQSVEIAARLDELEQKAYEIAEQEFNMNSPKQLQAILFEKMGLPVIKKTPSGTPSTNEEVLQELALDYPLPKLILEYRGLAKLKSTYTDKLPKMINPSTGRVHTSYHQAVTATGRLSSTDPNLQNIPIRNEEGRRIRQAFIAAAGYKILAVDYSQIELRIMAHLSGDQALLDAFRHGKDIHAATAAEIMGVSIDQVSSEQRRRAKAVNFGLIYGMSAFGLAKQLGIPRGEAQAYMDKYFERYPGVMQYMEDTRSAASAQGYVETIFGRRLHLPEIQSRNGMRRKAAERAAINAPMQGTAADIIKKAMLLVDQWIQEEGNGRVKLLMQVHDELVFEVEESSLVEIESKVQELMESAADLEVPLVADAGHGDNWDQAH
SIO_010081: VA249_RS00515
subclass of: SO_0000673
so part of: VA249_RS00515
location: 107094..109883
location: region:107094-109883:1
so has part: feature:107094-109883:1:exon

WP_221068463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107094-109883:1:exon

VA249_RS00520
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: yihA
locus tag: VA249_RS00520
old locus tag: VYA_00910
so part of: sequence
location: complement(110639..111298)
location: region:110639-111298:-1
so has part: feature:110639-111298:-1:exon
subclass of: SO_0000010

position:110639:-1
position: 110639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111298:-1
position: 111298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110639-111298:-1:exon

VA249_RS00520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: yihA
locus tag: VA249_RS00520
old locus tag: VYA_00910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005448545.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome biogenesis GTP-binding protein YihA/YsxC
translation: MSVKIHYQNTHFITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKVEEGCHIVDLPGYGFAQVPIEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQMIFWAIDSRIPVQVLLTKADKLKSGARKQTLLKIRKQVETFGGDVSVDVFSSLKGLGVDQLRAKLDTWFAPAFAHLIEEEEQDSQESGEE
SIO_010081: VA249_RS00520
subclass of: SO_0000673
so part of: VA249_RS00520
location: complement(110639..111298)
location: region:110639-111298:-1
so has part: feature:110639-111298:-1:exon

WP_128812069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110639-111298:-1:exon

VA249_RS00525
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00525
old locus tag: VYA_00920
so part of: sequence
location: 111458..112075
location: region:111458-112075:1
so has part: feature:111458-112075:1:exon
subclass of: SO_0000010

position:111458:1
position: 111458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112075:1
position: 112075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111458-112075:1:exon

VA249_RS00525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00525
old locus tag: VYA_00920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020433074.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: c-type cytochrome
translation: MKKLALILSLLASCSVWAQGNIEAGKAKSQTCVACHGADGNSALAMYPNLAGQHAKYLEKQLKDLKLGMTSGGKQGRYDPVMSGMAMPLSDEDIADLSAYYASLPIAESSTPENVVEQGKVLYTAGDAERGLTACIACHGPRGNGTELSGFPKISGQQADYIKAQLEKFRDGNRNNDMNAMMRDIAKKMTDEDIETLSKYVGGLH
SIO_010081: VA249_RS00525
subclass of: SO_0000673
so part of: VA249_RS00525
location: 111458..112075
location: region:111458-112075:1
so has part: feature:111458-112075:1:exon

WP_128812067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111458-112075:1:exon

VA249_RS00530
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00530
old locus tag: VYA_00930
so part of: sequence
location: 112916..113554
location: region:112916-113554:1
so has part: feature:112916-113554:1:exon
subclass of: SO_0000010

position:112916:1
position: 112916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113554:1
position: 113554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112916-113554:1:exon

VA249_RS00530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00530
old locus tag: VYA_00930
EC number: 2.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010433503.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MHTCPLCQNQRTHHYFEDKRREYLQCEQCNLVFVKPDQRLDAETEKAHYDLHENNPEDMGYRRFLARIADPIAERILPQSNGIDFGCGPGPTLSLMLEEAGHNMVLYDLYYHPDTSVLEKQYDFMTATEVIEHLYHPDLVWKQWLNLVKPGGWIGLMTKMVIDVEAFQSWHYKNDPTHVVFFSHETFQFLAERDKLELEFIGNDVILLRKTQ
SIO_010081: VA249_RS00530
subclass of: SO_0000673
so part of: VA249_RS00530
location: 112916..113554
location: region:112916-113554:1
so has part: feature:112916-113554:1:exon

WP_221068464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112916-113554:1:exon

VA249_RS00535
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: yihI
locus tag: VA249_RS00535
old locus tag: VYA_00940
so part of: sequence
location: 113554..114093
location: region:113554-114093:1
so has part: feature:113554-114093:1:exon
subclass of: SO_0000010

position:114093:1
position: 114093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113554-114093:1:exon

VA249_RS00535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: yihI
locus tag: VA249_RS00535
old locus tag: VYA_00940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011149190.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Der GTPase-activating protein YihI
translation: MSRSKKSRKPGAAGAPEFVVTRNRTESDVEGRLRKRAKKRKGLKKGSRNSEVNEQKKQSAAQNRDPRLGSKKKIPLIVEPAKKMTKQERRLSAAQELEMLENDAQLNVLLDRIEAGENLGKGLQQYVDEKLDRIERLMDQLGLLEPEEEDFTAPAAKGTRNDDDLLADFDGINFDDYKG
SIO_010081: VA249_RS00535
subclass of: SO_0000673
so part of: VA249_RS00535
location: 113554..114093
location: region:113554-114093:1
so has part: feature:113554-114093:1:exon

WP_221068465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113554-114093:1:exon

VA249_RS00540
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00540
old locus tag: VYA_00950
so part of: sequence
location: 114101..114589
location: region:114101-114589:1
so has part: feature:114101-114589:1:exon
subclass of: SO_0000010

position:114101:1
position: 114101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114589:1
position: 114589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114101-114589:1:exon

VA249_RS00540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00540
old locus tag: VYA_00950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005379254.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2489 domain-containing protein
translation: MNVTLLAIAGAVIIIALASYAGYLLLQLKKQKELQLKHKKLAIDKRNANIFENVHTLCLAGIQGQCDLSEISIRVYNIMDYVQGEDRVDFDTTYPAISELYHVVKDMARGEDRQKLTKKERMQQNLARHKAENRLTDAIVEELKVLQKNVQPLNNQINIQMI
SIO_010081: VA249_RS00540
subclass of: SO_0000673
so part of: VA249_RS00540
location: 114101..114589
location: region:114101-114589:1
so has part: feature:114101-114589:1:exon

WP_211915615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114101-114589:1:exon

VA249_RS00545
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: hemN
locus tag: VA249_RS00545
old locus tag: VYA_00960
so part of: sequence
location: 114774..116165
location: region:114774-116165:1
so has part: feature:114774-116165:1:exon
subclass of: SO_0000010

position:114774:1
position: 114774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116165:1
position: 116165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114774-116165:1:exon

VA249_RS00545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: hemN
locus tag: VA249_RS00545
old locus tag: VYA_00960
EC number: 1.3.98.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009842892.1
GO function: GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oxygen-independent coproporphyrinogen III oxidase
translation: MSNQHTESKQQIVWDQAVLDKYNYSGPRYTSYPTALEFHEAFTISDYDMACTQYSNRPLSLYVHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRASLLVGRTVTQLHFGGGTPTFLSEKQITRVMDLLRQEFTFSADAEISIEVDPREIELTMLDHLRSEGFNRLSIGVQDFNKEVQQLVNREQDEEFIFAMVARAKTLGFRSTNLDLIYGLPKQTKASFAKTLEQVLEMQPGRLSVFNYAHMPQLFAAQRKIKDEDLPQAEEKMAILQDTIATLTGAGYQFIGMDHFAMPDDELAVAQREGILHRNFQGYTTQGECDLVGFGVSAISMIGDAYAQNQKELKKYYAQVNDLRHALWKGVSLDADDLLRREVIKQLICNFKLDKKAIESEFKVNFEHYFKEDLQLLQTFIDDELVEVDGNEIRVTLRGRLLIRNICMCFDKYLRARARQQQFSRVI
SIO_010081: VA249_RS00545
subclass of: SO_0000673
so part of: VA249_RS00545
location: 114774..116165
location: region:114774-116165:1
so has part: feature:114774-116165:1:exon

WP_221068466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114774-116165:1:exon

VA249_RS00550
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: add
locus tag: VA249_RS00550
old locus tag: VYA_00970
so part of: sequence
location: complement(116253..117257)
location: region:116253-117257:-1
so has part: feature:116253-117257:-1:exon
subclass of: SO_0000010

position:116253:-1
position: 116253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117257:-1
position: 117257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116253-117257:-1:exon

VA249_RS00550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: add
locus tag: VA249_RS00550
old locus tag: VYA_00970
EC number: 3.5.4.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005379257.1
GO function: GO:0004000 - adenosine deaminase activity [Evidence IEA]
GO process: GO:0009168 - purine ribonucleoside monophosphate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenosine deaminase
translation: MITKNLPLTDLHRHLDGNIRTKTILELGQQFGVALPAYDIESLTPHVQIVEAEPSLVAFLSKLDWGVAVLGDLDACRRVAYENVEDALNAQIDYAELRFSPYYMAMKHKLPIAGVVEAVVDGVQAGMRDFGIKANLIGIMSRTFGTDACQQELDAILSQKSHIVAVDLAGDELGQPGDRFVSHFKQVRDAGLNVTVHAGEAAGAESMWQAIQELGATRIGHGVKAIHDPKLMDYLAENRIGIESCLTSNFQTSTVDSLANHPIKQFLEHGVLACLNTDDPAVEGIELPYEYEVAAPAAGLTQAQIRQAQINGLDLAFLSDAEKTELKDKVKDRA
SIO_010081: VA249_RS00550
subclass of: SO_0000673
so part of: VA249_RS00550
location: complement(116253..117257)
location: region:116253-117257:-1
so has part: feature:116253-117257:-1:exon

WP_221068467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116253-117257:-1:exon

VA249_RS00555
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00555
old locus tag: VYA_00980
so part of: sequence
location: complement(117420..119966)
location: region:117420-119966:-1
so has part: feature:117420-119966:-1:exon
subclass of: SO_0000010

position:117420:-1
position: 117420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119966:-1
position: 119966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117420-119966:-1:exon

VA249_RS00555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00555
old locus tag: VYA_00980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020195450.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EAL domain-containing protein
translation: MSNTTTQITLRTAVLIPFVMIFLLAISVIVYVQKQSYEDVVTDLSDKQLSVLTESVHDHLNDYLRKPFSAVTSLAHNVSYHNLFHPNDTQDIKTYLRSAFQNLYHSIPQLDVIAFGSRTGDFAGFRREPDGNYTLMVQDHRTNGNLVIYGNDKISDKIRTIIADYDPRTRPWYQPVAHTNQARWSPVYPNADERQDVTLSAMAPVYEKGTFAGVLVTDIRINTFSIFLRELKANTKASVFIMDQDRRLVAHSGQGSVISWGTKFSDEGQRLLASESLDPMIQLNAERIENVDLSKSDAPYTFEINLDGQRMFSRVTPYHDPNGLTWFIGTSISESDLLGTLPKSQQKSWIVGVFVSLVGIAIGWVIFNRTTRPIEATVVAAQHLAKGDWDSPLPRPGFIYETTILVKTFNEMANNLKASFKALREQLEFDSLTHLYSRQGLIEISEHLDSQHPACLFLFGVNKFRDINDSVGHHNGDQLLINIAERLRQQLQEEAILARIGGDEFAIFIQNINSEDDIRLIERRIQQLLASPFMLDGETVVIKVSMGIVRTDSAHNMNLWLRNASIALSSAKQDSLTNVCHYSPELASASKYRTQMVTKVQTGINNGEFKPYYQPIIDLASGNICGAEALARWDSESGMVSPLEFIPIAEESGMIKAIGQQIFSQACNDTRSAIDNKQWPENFQLHVNVSVNQLSCPDFVDTVRQVLDETRLPAKNVTLEITESRIVDSAPTTLDNISALRNMGLGIAIDDFGTGYSSLAYLHAIPFTCLKIDRTFINRLSKENLDNSVVAAIIRITKGIKTTVVAEGVETAAQAQLLSSLGCEQVQGFYYSRPLPIEEWPTHLVNMK
SIO_010081: VA249_RS00555
subclass of: SO_0000673
so part of: VA249_RS00555
location: complement(117420..119966)
location: region:117420-119966:-1
so has part: feature:117420-119966:-1:exon

WP_221068468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117420-119966:-1:exon

VA249_RS00560
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: glnG
locus tag: VA249_RS00560
old locus tag: VYA_00990
so part of: sequence
location: complement(120080..121483)
location: region:120080-121483:-1
so has part: feature:120080-121483:-1:exon
subclass of: SO_0000010

position:120080:-1
position: 120080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121483:-1
position: 121483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120080-121483:-1:exon

VA249_RS00560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: glnG
locus tag: VA249_RS00560
old locus tag: VYA_00990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017045684.1
GO function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogen regulation protein NR(I)
translation: MSKGYVWVVDDDSSIRWVMEKTLSSANIKCETYADGESVLMALEREVPDVLVSDIRMPGIDGLELLKQLQQNYPDLPVIIMTAHSDLDAAVNAYQKGAFEYLPKPFDIDETLTLVERAIAHSQENKREHLLPDDVPADTPEIIGEAPAMQEVFRAIGRLSRSSISVLINGESGTGKELVAHALHRHSPRANKPFIALNMAAIPKDLIESELFGHEKGAFTGANSVRQGRFEQANGGTLFLDEIGDMPLDIQTRLLRVLADGQFYRVGGHSPISVDVRIVAATHQNLEKLVHNGDFREDLFHRLNVIRVQIPALRERRQDIEKLTQHFLVRAADELGVETKTLHPSSVEILNRLTWPGNVRQLENICRWLTVMASGSEVLPSDLPPELLEEKKITKDSEHGSWQEQLSKWARSALAEGDKELLAYALPEFERIMLEAALEHTKGHKQDAAKVLGWGRNTLTRKLKELY
SIO_010081: VA249_RS00560
subclass of: SO_0000673
so part of: VA249_RS00560
location: complement(120080..121483)
location: region:120080-121483:-1
so has part: feature:120080-121483:-1:exon

WP_128812058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120080-121483:-1:exon

VA249_RS00565
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: glnL
locus tag: VA249_RS00565
old locus tag: VYA_01000
so part of: sequence
location: complement(121542..122588)
location: region:121542-122588:-1
so has part: feature:121542-122588:-1:exon
subclass of: SO_0000010

position:121542:-1
position: 121542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122588:-1
position: 122588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121542-122588:-1:exon

VA249_RS00565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: glnL
locus tag: VA249_RS00565
old locus tag: VYA_01000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017821940.1
GO function: GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO process: GO:0016310 - phosphorylation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogen regulation protein NR(II)
translation: MDTSLSSAILDNMVTATLILDDELAIRFANPAAELLFSQSAKRIVDQPLSQLIQHASMDLALLTQPLQSGQSITDSDVTFVVDGRPLMLEVTVSPLTWQKKLMLLVEMRKIDQQRRLTQELNQHAQQQAAKLLVRGLAHEIKNPLGGLRGAAQLLEKMLPDPSLTEYTHIIIEQADRLRALVDRLLGPQKPGKKSEENLHQVLEKVRQLVELESQHSVVIERDYDPSLPEILMDADQIEQAMLNIVSNAAQILSRQEHGKITIRTRTVHQANIHGQRCKLAARIEITDNGPGIPPELQDTLFYPMVSGREGGTGLGLSISQNLIDQHNGKIDVESWPGHTTFTIYLPI
SIO_010081: VA249_RS00565
subclass of: SO_0000673
so part of: VA249_RS00565
location: complement(121542..122588)
location: region:121542-122588:-1
so has part: feature:121542-122588:-1:exon

WP_221068469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121542-122588:-1:exon

VA249_RS00570
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00570
old locus tag: VYA_01010
so part of: sequence
location: complement(122731..123297)
location: region:122731-123297:-1
so has part: feature:122731-123297:-1:exon
subclass of: SO_0000010

position:122731:-1
position: 122731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123297:-1
position: 123297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122731-123297:-1:exon

VA249_RS00570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00570
old locus tag: VYA_01010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015296073.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4124 domain-containing protein
translation: MSVKMCLSLGIIVISLSTTAPCAQEIFTWLDEKGIRHFSDTPQKGADVVILPNLKANTPTSLPLEPPVLEPSALKSTILEPPAFESSSFKPLSLTILNPQHDMTIRSNQGIIMVQLKSNRPLGSAEHVQLLLDGKPYGAPQRNLDWRLNNIDRGTHTLTVQTIRNGKLIASASPITVHLHRASVSPSN
SIO_010081: VA249_RS00570
subclass of: SO_0000673
so part of: VA249_RS00570
location: complement(122731..123297)
location: region:122731-123297:-1
so has part: feature:122731-123297:-1:exon

WP_221068470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122731-123297:-1:exon

VA249_RS00575
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: glnA
locus tag: VA249_RS00575
old locus tag: VYA_01020
so part of: sequence
location: complement(123457..124866)
location: region:123457-124866:-1
so has part: feature:123457-124866:-1:exon
subclass of: SO_0000010

position:123457:-1
position: 123457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124866:-1
position: 124866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123457-124866:-1:exon

VA249_RS00575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: glnA
locus tag: VA249_RS00575
old locus tag: VYA_01020
EC number: 6.3.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017789561.1
GO function: GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO process: GO:0006542 - glutamine biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate--ammonia ligase
translation: MSVENVLSLIQENEVKFVDLRFTDTKGKEQHITIPAHQIDADFFEEGKMFDGSSVAGWKGINESDMVMMPDASSAVLDPFTEDATLNVRCDILEPATMQGYDRDPRSIAKRAEDYMRSTGIADTVLVGPEPEFFLFDDVKFSNDMSGSFFKIDDVEAAWNTGSDIEGGNKGHRPGVKGGYFPVAPVDSSQDIRSAMCLIMEEMGLVVEAHHHEVATAGQNEIATRFNTLTTKADEIQIYKYVVHNVAHAFGKTATFMPKPLVGDNGSGMHVHQSLAKDGVNLFAGDKYGGLSETALYYIGGIIKHARAINAFANPSTNSYKRLVPGFEAPVMLAYSARNRSASIRIPVVPSPKARRIEARFPDPAANPYLAFASLLMAGLDGIKNKIHPGEAMDKDLYDLPAEEAAEIPKVAESLEVALNALDADREFLTAGGVFSDDFIDSYIALKSQDVERVNMATHPLEFELYYSV
SIO_010081: VA249_RS00575
subclass of: SO_0000673
so part of: VA249_RS00575
location: complement(123457..124866)
location: region:123457-124866:-1
so has part: feature:123457-124866:-1:exon

WP_211915610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123457-124866:-1:exon

VA249_RS00580
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: typA
locus tag: VA249_RS00580
old locus tag: VYA_01030
so part of: sequence
location: 125396..127228
location: region:125396-127228:1
so has part: feature:125396-127228:1:exon
subclass of: SO_0000010

position:125396:1
position: 125396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127228:1
position: 127228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125396-127228:1:exon

VA249_RS00580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: typA
locus tag: VA249_RS00580
old locus tag: VYA_01030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005596882.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
GO process: GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translational GTPase TypA
translation: MATPQIDKLRNIAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWNDYRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVINKIDRPGARPDWVMDQVFDLFDNLGATDEQLDFKVVYASALNGWATLEEGETGENMEPLFQTIVDQVEAPQVDLDGPLQMQISQLDYSSYVGVIGVARVTRGTVRPNQQVTIVGADGKKRNGKVGTVMGYLGLERHDIEQANAGDIIAITGLGELKISDTICDVNNVEAMIPLSVDEPTVTMTFQVNTSPFAGKEGKFVTSRNILERLQKELVHNVALRVEETDNPDRFRVSGRGELHLSILIENMRREGFELAVSRPEVIIKRDEDGNLQEPFETVTIDVMEENQGGIMEAIGLRKGELTDMSPDGKGRVRMDFMMPSRGLIGFQTEFMTLTSGSGLLYHSFDHYGPHKGGTIGQRNNGVLISNATGKALTYALFNLQERGRLFAEHADEVYEGQVIGIHNRSNDLTVNCLKGKQLTNVRASGTDEAQVLTPAIKFTLEQALEFIDDDELVEVTPESIRIRKRHLTENDRKRASRDAK
SIO_010081: VA249_RS00580
subclass of: SO_0000673
so part of: VA249_RS00580
location: 125396..127228
location: region:125396-127228:1
so has part: feature:125396-127228:1:exon

WP_221068471.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125396-127228:1:exon

VA249_RS00585
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00585
old locus tag: VYA_01040
so part of: sequence
location: 127358..127900
location: region:127358-127900:1
so has part: feature:127358-127900:1:exon
subclass of: SO_0000010

position:127358:1
position: 127358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127900:1
position: 127900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127358-127900:1:exon

VA249_RS00585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00585
old locus tag: VYA_01040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017449052.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MKPIIITGGPGAGKTTLIKALADVGYATFEEASRYLITEQSRLPNGALPWTNLPVFAQLCLALMGKQKTEALEHSLAFVDRAIPDIVAYLQVGGCHVGPEFIAGSAGYHDQVLACRPESSIYVQDEVRPHSFEEAMQIHQTLVETYVELGYDVVEVPWGTIRERVEFVRSVVGLVDEVTN
SIO_010081: VA249_RS00585
subclass of: SO_0000673
so part of: VA249_RS00585
location: 127358..127900
location: region:127358-127900:1
so has part: feature:127358-127900:1:exon

WP_221068472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127358-127900:1:exon

VA249_RS00590
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00590
old locus tag: VYA_01050
so part of: sequence
location: complement(127932..128573)
location: region:127932-128573:-1
so has part: feature:127932-128573:-1:exon
subclass of: SO_0000010

position:127932:-1
position: 127932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128573:-1
position: 128573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127932-128573:-1:exon

VA249_RS00590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00590
old locus tag: VYA_01050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004741470.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2959 domain-containing protein
translation: MPYLLAIVLSIFTLTGCQSAYYSAMEQVGYHKREIMVDRVEDAKESQQDAQEEFTSALEALSALTNFNGGELESVYNNINDKYEDSEKAAQDVRDRIAAIEDVSDALFAEWQDELDLYTSAKLRRSSEQKLRETKASYKTMLSAMKRAEDKMTPVLNTLRDNTLFLKHNLNASAIGSLKGEFSSLEKDIQYAIKQMNAAIAESDKFLQQLNQK
SIO_010081: VA249_RS00590
subclass of: SO_0000673
so part of: VA249_RS00590
location: complement(127932..128573)
location: region:127932-128573:-1
so has part: feature:127932-128573:-1:exon

WP_128812048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127932-128573:-1:exon

VA249_RS00595
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00595
old locus tag: VYA_01060
so part of: sequence
location: 128609..129553
location: region:128609-129553:1
so has part: feature:128609-129553:1:exon
subclass of: SO_0000010

position:128609:1
position: 128609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129553:1
position: 129553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128609-129553:1:exon

VA249_RS00595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00595
old locus tag: VYA_01060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010650497.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: virulence factor BrkB family protein
translation: MNQLSESYKVRLTRLVPGGVAFFKYLLKRMTHDRVNVNAGYLAYITLLSIVPMLTVLLSILSKFPVFSNVGEVLQGYIIDNFVPASGDAVRTALQEFVANTGKMTAVGGAFLFVAALMLISNIDKNLNYIWRVKDKRRPVFSFSMYWMVLTLGPIMVGASIAATSYVTSLRLIENETLSGAYDLFLRWLPLLLSFFAFMGLYLLVPNKKVYLTHAALGAAVAAILFEFSKKGFAFYITQFPSYQLIYGALAAIPILFVWVYLCWLIVLIGAEVTASLGEREHWSDNLEMIHSTAEFQLTDEGKESRDSANSTRQ
SIO_010081: VA249_RS00595
subclass of: SO_0000673
so part of: VA249_RS00595
location: 128609..129553
location: region:128609-129553:1
so has part: feature:128609-129553:1:exon

WP_221068473.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128609-129553:1:exon

VA249_RS00600
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: dtd
locus tag: VA249_RS00600
old locus tag: VYA_01070
so part of: sequence
location: 129525..129959
location: region:129525-129959:1
so has part: feature:129525-129959:1:exon
subclass of: SO_0000010

position:129525:1
position: 129525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129959:1
position: 129959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129525-129959:1:exon

VA249_RS00600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: dtd
locus tag: VA249_RS00600
old locus tag: VYA_01070
EC number: 3.1.1.96
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016787707.1
GO function: GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
GO process: GO:0008152 - metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-aminoacyl-tRNA deacylase
translation: MIALIQRVSEAAVRVDGEVVGEIEQGLLVLLGVERDDDEAKAKRLMERVTTYRVFEDDEGKMNLNVKQVNGQVLVVSQFTLPADTKKGTRAGFSRGAHPADAERLYDYFSDLCEQELPTQRGRFAADMKVSLINDGPVTFWLQV
SIO_010081: VA249_RS00600
subclass of: SO_0000673
so part of: VA249_RS00600
location: 129525..129959
location: region:129525-129959:1
so has part: feature:129525-129959:1:exon

WP_221068474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129525-129959:1:exon

VA249_RS00605
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00605
old locus tag: VYA_01080
so part of: sequence
location: 130067..130984
location: region:130067-130984:1
so has part: feature:130067-130984:1:exon
subclass of: SO_0000010

position:130067:1
position: 130067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130984:1
position: 130984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130067-130984:1:exon

VA249_RS00605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00605
old locus tag: VYA_01080
EC number: 2.3.1.-
EC number: 3.1.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005456791.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional GNAT family N-acetyltransferase/hotdog fold thioesterase
translation: MFKLITPKTENQLKKYYQFRWQLLREPWRMPVGSERDEYDGMSHHRMITDSRGRPMAIGRLYITPDNDGQIRYMAVKNNRRTKGMGSLVLVALESLARQEGAKRLVCNAREDAIAFYEKNGFERRGELTDERGPVRHQQMVKPLDPMADVLRRPDWCTELQERWEAQIPIADKMGIKINQYTGYQFECSAQLNPNLNPHNTMFAGSAFTLATLTGWGMTWLLMKERGLHGDIVLADSSIRYRHPVEQNPVASTSLDGISGDLDRLASGRKARIVIHVVIYSGDVPAVDFVGTYMLLPNYSKLLSC
SIO_010081: VA249_RS00605
subclass of: SO_0000673
so part of: VA249_RS00605
location: 130067..130984
location: region:130067-130984:1
so has part: feature:130067-130984:1:exon

WP_128812042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130067-130984:1:exon

VA249_RS00610
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00610
old locus tag: VYA_01090
so part of: sequence
location: complement(130970..132988)
location: region:130970-132988:-1
so has part: feature:130970-132988:-1:exon
subclass of: SO_0000010

position:130970:-1
position: 130970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132988:-1
position: 132988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130970-132988:-1:exon

VA249_RS00610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00610
old locus tag: VYA_01090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006741785.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AsmA family protein
translation: MKTAGRILILILILAIALPAAFVTLLTTSYSRQVWSQFANLVDLPLQADNIQYDFPYHITLYGVATKQEKLPFIEQIDLWLNPDIRRDGTWIVDSLLIDGLSLQHGLPTLPNLSHVYFHQVALKNIDYADESFSINGLNLQIQEPTWASPSQSLPYGQIQLSAEQLYWNGEALNKLLIDVDYKAQDSTLYGASFNWRGSEVSGQAEQYPQGWSLVNVTIDKLNINNTQLQSLFAKPWQELPVHIHHINSVDLLNAEIEYGNWHWQNLELSVENATLPVSLWETTAQISLQADSVSFQDQTAIEPRLNAQLKPDSIQLQELSFDWQQGSVQVSGDLEPEHWKINTATISGLKWAIQPEDKNDWWQAATEKLQQVDVKQLEIERSQIIQLSHQPYWQLSGLNLDGHQLTVKHSHGRWGVWNGKLNASVVNASYDQVLSSHAALSTESENGFWQLTRLFAPLEQGYIEGFGQYDLSAPSQPWGLNLNADGLPLQLVRPYLPPALALNGFSDLSLDLQGLGGDRSMLSYSLSGKVAANLRDTTLTSQSDQSLKTVTISPIQLKAQRGEVTMQPITISGKAITGSISGGFDMANDPLSGVVYQLKDLCGKVQGDLFSRDVELNECVTQSEPAKKEKEPSEAPTAAPVGDINIEHHEEFNEVVTEEDEDKTVADSTAQ
SIO_010081: VA249_RS00610
subclass of: SO_0000673
so part of: VA249_RS00610
location: complement(130970..132988)
location: region:130970-132988:-1
so has part: feature:130970-132988:-1:exon

WP_221068475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130970-132988:-1:exon

VA249_RS00615
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: pckA
locus tag: VA249_RS00615
old locus tag: VYA_01100
so part of: sequence
location: complement(133150..134778)
location: region:133150-134778:-1
so has part: feature:133150-134778:-1:exon
subclass of: SO_0000010

position:133150:-1
position: 133150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134778:-1
position: 134778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133150-134778:-1:exon

VA249_RS00615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: pckA
locus tag: VA249_RS00615
old locus tag: VYA_01100
EC number: 4.1.1.49
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017036278.1
GO function: GO:0004612 - phosphoenolpyruvate carboxykinase (ATP) activity [Evidence IEA]
GO process: GO:0006094 - gluconeogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoenolpyruvate carboxykinase (ATP)
translation: MTVMEHTKAATLDLTKHGLHNVKEVIRNPSYEMLFEEETRADLEGYERGVVTELGAVAVDTGIFTGRSPKDKYIVKDATTEEHMWWTSDAVKNDNKPINKEVWDDLKTLVTNQLSGKRLFVIDGYCGANPDTRLSIRVITEVAWQAHFVKNMFIRPSEEELAAFEPDFVVMNGAKCTNEKWEEHDLNSENFTVFNLTERMQLIGGTWYGGEMKKGMFAMMNYFLPLKDIASMHCSANMGEEGDVAIFFGLSGTGKTTLSTDPKRALIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPDIYNAIRRDALLENVTVRGDGSIDFDDGSKTENTRVSYPLHHIDNIVKPVSKGGHANKVIFLSADAFGVLPPVSKLTPEQTKYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLTLHPTKYAEVLVKRMEAAGAEAYLVNTGWNGSGKRISIQDTRGIIDAILDGSIEDAKTKHIPIFNLEVPTSLPGVDPSILDPRDTYVDPLQWESKAKDLAERFINNFDKYTDNAEGQSLVKAGPQLD
SIO_010081: VA249_RS00615
subclass of: SO_0000673
so part of: VA249_RS00615
location: complement(133150..134778)
location: region:133150-134778:-1
so has part: feature:133150-134778:-1:exon

WP_221068476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133150-134778:-1:exon

VA249_RS00620
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: hslO
locus tag: VA249_RS00620
old locus tag: VYA_01110
so part of: sequence
location: complement(135115..135990)
location: region:135115-135990:-1
so has part: feature:135115-135990:-1:exon
subclass of: SO_0000010

position:135115:-1
position: 135115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135990:-1
position: 135990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135115-135990:-1:exon

VA249_RS00620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: hslO
locus tag: VA249_RS00620
old locus tag: VYA_01110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011078947.1
GO function: GO:0051082 - unfolded protein binding [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hsp33 family molecular chaperone HslO
translation: MANNVLNRYLFEDLSVRGELVQLDEAYQRIISSKEYPAALQKLLGELLVSTTLLTATLKFEGSITIQLQGDGPVSLAVINGDHDQKIRGVARWEGDIADDASLHDMMGKGYLVITIEPKKGERYQGVVGLEGDTLADVIEGYFANSEQLKTRIWIRTGELDGKAHAAGMMIQIMPDGTGTPEDFEHLEQLTNTVKDEELFTLEANELLYRLYNQDTVRLYEPQPVEFHCGCSRERSGAAIITLDKAEVYDILAEEGSVSLHCDYCGTSYAFDEPAITELYSEAEPNNKTLH
SIO_010081: VA249_RS00620
subclass of: SO_0000673
so part of: VA249_RS00620
location: complement(135115..135990)
location: region:135115-135990:-1
so has part: feature:135115-135990:-1:exon

WP_128812036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135115-135990:-1:exon

VA249_RS00625
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: hslR
locus tag: VA249_RS00625
old locus tag: VYA_01120
so part of: sequence
location: complement(136021..136407)
location: region:136021-136407:-1
so has part: feature:136021-136407:-1:exon
subclass of: SO_0000010

position:136021:-1
position: 136021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136407:-1
position: 136407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136021-136407:-1:exon

VA249_RS00625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: hslR
locus tag: VA249_RS00625
old locus tag: VYA_01120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012603005.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome-associated heat shock protein Hsp15
translation: MSSENEAVRLDKWLWAARFYKTRSIARNMVDGGKVHYNGQRSKPSKIVELGAEIRLRQGNEEKTVVIEKISDRRMGAPIAQTLYRETESSISLREEQAMQRKLNAHNPSPERRPDKKQRRDIIKFKHQ
SIO_010081: VA249_RS00625
subclass of: SO_0000673
so part of: VA249_RS00625
location: complement(136021..136407)
location: region:136021-136407:-1
so has part: feature:136021-136407:-1:exon

WP_128812034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136021-136407:-1:exon

VA249_RS00630
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: gspC
locus tag: VA249_RS00630
old locus tag: VYA_01130
so part of: sequence
location: 136661..137581
location: region:136661-137581:1
so has part: feature:136661-137581:1:exon
subclass of: SO_0000010

position:136661:1
position: 136661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137581:1
position: 137581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136661-137581:1:exon

VA249_RS00630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: gspC
locus tag: VA249_RS00630
old locus tag: VYA_01130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005529083.1
GO component: GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system protein GspC
translation: MKRLELSAGLSSRSLLTHIKSNNHAIQAKLSLLLTCLFIALTAWVLGKLVWLSVPQSTDVVQWRPSASRVESNTAKDTIDFNALQNAHLFGQYTEQKPVIVEQPVVQDAPKTRLNLTLVGAVASSNVKTSLAVIANRGKQATYGIGEEIEGTRATLKAVLVDRVIIDNQGRDETLMLQGIEYKKLSESPQAARPVAKPSNNAAVGDKLEQIREEIAQDPQSVFKYINISPVKKDGGIAGYRVSPGRDASLFNDVGLKAGDIAVQLNGIDLSDPSSSVQLMQVMNDPQELNLTVERDGQQYDIYIQL
SIO_010081: VA249_RS00630
subclass of: SO_0000673
so part of: VA249_RS00630
location: 136661..137581
location: region:136661-137581:1
so has part: feature:136661-137581:1:exon

WP_221068477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136661-137581:1:exon

VA249_RS00635
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: gspD
locus tag: VA249_RS00635
old locus tag: VYA_01140
so part of: sequence
location: 137618..139657
location: region:137618-139657:1
so has part: feature:137618-139657:1:exon
subclass of: SO_0000010

position:137618:1
position: 137618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139657:1
position: 139657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137618-139657:1:exon

VA249_RS00635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: gspD
locus tag: VA249_RS00635
old locus tag: VYA_01140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010444983.1
GO component: GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system secretin GspD
translation: MKHWFSKSTWLLAGTLLCAPGAMANEFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGKIDVRSYDVLNEEQYYSFFLNVLEVYGYAVVEMDNNVLKVIKAKDAKTSAIPVVSGNAEPGDSVITRVVAVRNVSVRELSPLLRQLINNAGAGNVVHYDPANIILITGRAAVVNRLAEIIKRVDQAGDRNIELVELQNASAAEMVRIIDALNKTTAQKSTPEFLEPKIVADERTNSILISGDPKVRARLKRLIRQLDIEMATKGNNRVVYLKYAKAEDLVDVLKGVSDNLQAEKQAGQKGASSAKRGEVVIASHEATNSLVLTAPPDIMIALQDVIAQLDIRRAQVLIEALIVEMAEGDGVNLGVQWGNLETGAMIQYSNTGAPIGQVMVGLEEAKDVTKTESYWNSSGGENGNGAWETREFTEEGDYSTLAAALGGVNGAAMSIVMGDWTALISAVASDSNSNILSSPSITVMDNGEASFIVGEEVPVITGSTAGSNNDNPFQTVDRKEVGIKLKVVPQINEGDSVQLNIEQEVSNVLGANGAVDVRFAKRQLNTSVMVQDGQMLVLGGLIDERALESESKVPLLGDIPVLGHLFKSTSTQVEKKNLMVFIKPTIIRDGMTADGITQRKYNFIRAEQLYNQEQGLKLMSDDNIPVLPEFGRERKHPAEIQAFIDQMEVK
SIO_010081: VA249_RS00635
subclass of: SO_0000673
so part of: VA249_RS00635
location: 137618..139657
location: region:137618-139657:1
so has part: feature:137618-139657:1:exon

WP_221068478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137618-139657:1:exon

VA249_RS00640
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: gspE
locus tag: VA249_RS00640
old locus tag: VYA_01150
so part of: sequence
location: 139657..141159
location: region:139657-141159:1
so has part: feature:139657-141159:1:exon
subclass of: SO_0000010

position:141159:1
position: 141159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139657-141159:1:exon

VA249_RS00640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: gspE
locus tag: VA249_RS00640
old locus tag: VYA_01150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017189956.1
GO component: GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system ATPase GspE
translation: MVDMLDTAPSMRRLPFSFANRFKLVLETEHPERPPILYYVEPLNPAALVEVRRVLKQNFIPQVMDKDAFDKKLTEAYQRDSSEARQLMEDIGADSDDFFSLAEELPHDEDLLESEDDAPIIKLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLTPSRKLAPLLVSRVKVMAKLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTPSVHHNFAHLIQRPHGIILVTGPTGSGKSTTLYAGLQEINSNERNILTVEDPIEFDIDGIGQTQVNPKVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAITRLRDMGIEPFLISSSLLGVLAQRLVRTLCSDCKEPYEADKEQKKLFEMEETESLVLHRAKGCEACNQKGYRGRTGIHELLMVDDKVQELIHSEAGEQEVEKAVRAHTPSIRSDGLSKVRLGITSLEEVMRVTKEA
SIO_010081: VA249_RS00640
subclass of: SO_0000673
so part of: VA249_RS00640
location: 139657..141159
location: region:139657-141159:1
so has part: feature:139657-141159:1:exon

WP_128812030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139657-141159:1:exon

VA249_RS00645
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: gspF
locus tag: VA249_RS00645
old locus tag: VYA_01160
pseudo: true
so part of: sequence
location: 141159..142375
location: region:141159-142375:1
so has part: feature:141159-142375:1:exon
subclass of: SO_0000010

position:142375:1
position: 142375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141159-142375:1:exon

VA249_RS00645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: gspF
locus tag: VA249_RS00645
old locus tag: VYA_01160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004735600.1
GO component: GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type II secretion system inner membrane protein GspF
SIO_010081: VA249_RS00645
subclass of: SO_0000673
so part of: VA249_RS00645
location: 141159..142375
location: region:141159-142375:1
so has part: feature:141159-142375:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141159-142375:1:exon

VA249_RS00650
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: gspG
locus tag: VA249_RS00650
old locus tag: VYA_01170
so part of: sequence
location: 142436..142879
location: region:142436-142879:1
so has part: feature:142436-142879:1:exon
subclass of: SO_0000010

position:142436:1
position: 142436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142879:1
position: 142879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142436-142879:1:exon

VA249_RS00650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: gspG
locus tag: VA249_RS00650
old locus tag: VYA_01170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005430189.1
GO component: GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system major pseudopilin GspG
translation: MKFKRSKQRGFTLLEVMVVVVILGILASFVVPNLLGNKEKADQQKAITDIVALENALDMYKLDNSVYPTTDQGLDALVTKPSNPEPRNYRDGGYIKRLPNDPWGNEYQYLSPGDNGTIDIFTLGADGQEGGEGPAADIGNWNMQDFQ
SIO_010081: VA249_RS00650
subclass of: SO_0000673
so part of: VA249_RS00650
location: 142436..142879
location: region:142436-142879:1
so has part: feature:142436-142879:1:exon

WP_128812024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142436-142879:1:exon

VA249_RS00655
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00655
old locus tag: VYA_01180
so part of: sequence
location: 142911..143516
location: region:142911-143516:1
so has part: feature:142911-143516:1:exon
subclass of: SO_0000010

position:142911:1
position: 142911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143516:1
position: 143516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142911-143516:1:exon

VA249_RS00655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00655
old locus tag: VYA_01180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005529093.1
GO component: GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GspH/FimT family pseudopilin
translation: MQKHHGFTLIEILLVLVLLSLTAVAVITTLPTSQKDLSKQYAQSFFQRLQLLNEEAVLSGKDFGVRVDEAKSTYVLLSLTQDGWQPLELKQIPSETKLEDDIALQLELGGGAWDDDNRLFEPGSLFDEDMFAEEDDEKNKKVKPPQVFVFSSAELTPFTLSFFPENGDTLNDGWRIIGKETGEIKLLAPGEEAEDDDNTRF
SIO_010081: VA249_RS00655
subclass of: SO_0000673
so part of: VA249_RS00655
location: 142911..143516
location: region:142911-143516:1
so has part: feature:142911-143516:1:exon

WP_211915600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142911-143516:1:exon

VA249_RS00660
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: gspI
locus tag: VA249_RS00660
old locus tag: VYA_01190
so part of: sequence
location: 143497..143892
location: region:143497-143892:1
so has part: feature:143497-143892:1:exon
subclass of: SO_0000010

position:143497:1
position: 143497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143892:1
position: 143892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143497-143892:1:exon

VA249_RS00660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: gspI
locus tag: VA249_RS00660
old locus tag: VYA_01190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005430093.1
GO component: GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system minor pseudopilin GspI
translation: MTIRDSNLHRIGKSYRKTRGMTLLEVLVALAIFATAAISVIRSVSQHINTISYLEEKIFAAMVVDNQMANVMLATEKLKAKNGTEELAGRTWYWKVTPVATAQPLLKAFDVSVATAKNTSPVVTVRSYVAQ
SIO_010081: VA249_RS00660
subclass of: SO_0000673
so part of: VA249_RS00660
location: 143497..143892
location: region:143497-143892:1
so has part: feature:143497-143892:1:exon

WP_221068479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143497-143892:1:exon

VA249_RS00665
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: gspJ
locus tag: VA249_RS00665
old locus tag: VYA_01200
so part of: sequence
location: 143879..144604
location: region:143879-144604:1
so has part: feature:143879-144604:1:exon
subclass of: SO_0000010

position:143879:1
position: 143879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144604:1
position: 144604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143879-144604:1:exon

VA249_RS00665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: gspJ
locus tag: VA249_RS00665
old locus tag: VYA_01200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009702504.1
GO component: GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system minor pseudopilin GspJ
translation: MWRSKTKRLMHGHPTRSKQSGFTLIEVLVSIAIFASLSVAAYQVVSQVQRSNVLSQERTQRLNELQRAMVMMDNDFRQMAMRQIRTNGEEPSSQLIFWSDYLLDSDAKGVMFARLGWHNPQQQFPRGEVTKVGYRLKDNVLQRIWWRYPDTPTGQEGLVTPLLTQVESFDMRFYDGKSWQKNWANNRELPKAVSVILDLKDYGEITRTYLTPDGKFSSSNSDDASSNDSAGGNNASGDSNG
SIO_010081: VA249_RS00665
subclass of: SO_0000673
so part of: VA249_RS00665
location: 143879..144604
location: region:143879-144604:1
so has part: feature:143879-144604:1:exon

WP_221068480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143879-144604:1:exon

VA249_RS00670
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: gspK
locus tag: VA249_RS00670
old locus tag: VYA_01210
so part of: sequence
location: 144597..145607
location: region:144597-145607:1
so has part: feature:144597-145607:1:exon
subclass of: SO_0000010

position:144597:1
position: 144597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145607:1
position: 145607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144597-145607:1:exon

VA249_RS00670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: gspK
locus tag: VA249_RS00670
old locus tag: VYA_01210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012126780.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system minor pseudopilin GspK
translation: MAKRQRGVALIIVLMLLTIMTTIAASMSERLFLQFQRGANQINYQQAYWYSLGVEALAKVGIEQSYKDSDTINLSQPWAIKEQVYPLDYGQASGKIIDKQACYNLNVLASVQPAGEQTTRPYLVQVLQRMLEEADVEPYQAEVIADSAWEYVDSDNTVRSTTGVEDSTYEAMKPAYLPPNGLMADVSELRAIYQVSGDIYQKIAPLVCAIPTDDWRLNVNTIEVEQASILVAMFTPGLNNSDAVQLIEKRPFDGWDSVDEFLAESELAGLSDDVKKNAKGYLGVDSAYFELDAQVLVDESRVRIRSLLQSTNRETVTVVRRRFGGISERVSDRSAE
SIO_010081: VA249_RS00670
subclass of: SO_0000673
so part of: VA249_RS00670
location: 144597..145607
location: region:144597-145607:1
so has part: feature:144597-145607:1:exon

WP_221068481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144597-145607:1:exon

VA249_RS00675
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: gspL
locus tag: VA249_RS00675
old locus tag: VYA_01220
so part of: sequence
location: 145576..146778
location: region:145576-146778:1
so has part: feature:145576-146778:1:exon
subclass of: SO_0000010

position:145576:1
position: 145576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146778:1
position: 146778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145576-146778:1:exon

VA249_RS00675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: gspL
locus tag: VA249_RS00675
old locus tag: VYA_01220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017635008.1
GO component: GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system protein GspL
translation: MSEFLTVRLSSEQQSTIPWLVWSTQQQEVIASGEIAGWEHLDELTAYAEQRQVIALLASNDVVLTELDIPPGAARQFDSMLPYLVEDEVAQDVDSLHFTVLDKQADKAQVCAVERAWIQTILQRFSTQGIVIKRILPDVLALPCEEDSSTAVLLGEQWLIRHSQTQGAVVDSSWLDLYLSAYRQNKPEWKLNSYSSLPEASMADVWVAKPEEMTMALLAKGVAETKTNILTGAFKPKSSLGKYVKVWQKTAIAASVLLVVLVAQQLLMVHKYEAQADAYREESERIFRQVFPGKNRIPTVSYLKRQMTDEERRLSGGASEQAMLPWLAALPSALGQVKDLQVTSFKYDGQRGEVRIQATSSDFQPFEQARVKLAEKFNVEQGQLNRNGNVVMGSFVLKRL
SIO_010081: VA249_RS00675
subclass of: SO_0000673
so part of: VA249_RS00675
location: 145576..146778
location: region:145576-146778:1
so has part: feature:145576-146778:1:exon

WP_221068482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145576-146778:1:exon

VA249_RS00680
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00680
old locus tag: VYA_01230
so part of: sequence
location: 146786..147277
location: region:146786-147277:1
so has part: feature:146786-147277:1:exon
subclass of: SO_0000010

position:146786:1
position: 146786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147277:1
position: 147277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146786-147277:1:exon

VA249_RS00680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00680
old locus tag: VYA_01230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008218432.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system protein M
translation: MKNLISPIQAWWSSISQREQRLVLGCGAIAVVGIIYWGVLQPMSQRAELAQSRISSEKQLLSWVQNKADDITALRKSGGVSFSNQPLNQIVSSSARRYKVELIRVQPRNESVQVWIKPLAFNQMVDWLRYLKEQQGIEVEFLDIDRTEQAGMIDVNRLQFKRG
SIO_010081: VA249_RS00680
subclass of: SO_0000673
so part of: VA249_RS00680
location: 146786..147277
location: region:146786-147277:1
so has part: feature:146786-147277:1:exon

WP_221069762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146786-147277:1:exon

VA249_RS00685
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00685
old locus tag: VYA_01240
so part of: sequence
location: 147279..148040
location: region:147279-148040:1
so has part: feature:147279-148040:1:exon
subclass of: SO_0000010

position:147279:1
position: 147279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148040:1
position: 148040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147279-148040:1:exon

VA249_RS00685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00685
old locus tag: VYA_01240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005434480.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system protein N
translation: MKRVVLYVVIFITFFSASLIAGLPVSWVLQQAPKVRGLEIQGAQGTVWQGQASNVMWQRQNLGEVNWDFQLSRLFTGKVEFAVRFGRGSDMDVRGKGFVGYSLAGGPYAENLVASMPAEKVVEQARLPVPVGVDGQLELNIRHASYAAPWCKTGEGTLVWSASGIQSPLGSLDLGPVIADLNCKDSVLTASGEQQSKQVSAAFSAELQPNQRYSTKAWFKPGAEFPSGMSDQLKWLGNPNAQGQYEFNYQGRF
SIO_010081: VA249_RS00685
subclass of: SO_0000673
so part of: VA249_RS00685
location: 147279..148040
location: region:147279-148040:1
so has part: feature:147279-148040:1:exon

WP_221068483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147279-148040:1:exon

VA249_RS00690
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: cysQ
locus tag: VA249_RS00690
old locus tag: VYA_01250
so part of: sequence
location: complement(148436..149263)
location: region:148436-149263:-1
so has part: feature:148436-149263:-1:exon
subclass of: SO_0000010

position:148436:-1
position: 148436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149263:-1
position: 149263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148436-149263:-1:exon

VA249_RS00690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: cysQ
locus tag: VA249_RS00690
old locus tag: VYA_01250
EC number: 3.1.3.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017076153.1
GO function: GO:0008441 - 3'(2'),5'-bisphosphate nucleotidase activity [Evidence IEA]
GO process: GO:0006790 - sulfur compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3'(2'),5'-bisphosphate nucleotidase CysQ
translation: MPMTKDLSHLLPQVIEIARSAGQLILDIYEKKQYEAYTKSDETPVTSADIAAHKLITERLSELTPDIPVLSEEAADISLEQREKWERYWLVDPLDGTQEFIARSGDFATIIALIDNNKPTMGVVYGPVSGVTYYAYSGKGAWKIPDMSESVKIYTHKHEQPGQNIAIAISRRQDINRITSRMSSAWNYDLIPLGSAALKACLVAEGAVDCYLRLGPTGEWDTAATQCIVEEAGGRILSTQLEPLSYNERETLENPNFIVLGDADLPWHEILQEKD
SIO_010081: VA249_RS00690
subclass of: SO_0000673
so part of: VA249_RS00690
location: complement(148436..149263)
location: region:148436-149263:-1
so has part: feature:148436-149263:-1:exon

WP_128812014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148436-149263:-1:exon

VA249_RS00695
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: nudE
locus tag: VA249_RS00695
old locus tag: VYA_01260
so part of: sequence
location: complement(149326..149889)
location: region:149326-149889:-1
so has part: feature:149326-149889:-1:exon
subclass of: SO_0000010

position:149326:-1
position: 149326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149889:-1
position: 149889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149326-149889:-1:exon

VA249_RS00695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: nudE
locus tag: VA249_RS00695
old locus tag: VYA_01260
EC number: 3.6.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020335697.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ADP compounds hydrolase NudE
translation: MSKRTPPEILSCETVAKSKLFAVEALDLRFSNGELRTYERMKPSGRDAVMVVPVTEQGDLLLVREYAAGTERYELGFPKGLIDAGETPEQAADRELKEEIGFGAQHLVPLKRVILAPSYFSSKMTLFLGQGLYPEQMQGDEPEPLEIVRWPLAQAEELLTHLDFCEARSITALMLALKHLQNTTRNP
SIO_010081: VA249_RS00695
subclass of: SO_0000673
so part of: VA249_RS00695
location: complement(149326..149889)
location: region:149326-149889:-1
so has part: feature:149326-149889:-1:exon

WP_211915593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149326-149889:-1:exon

VA249_RS00700
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: nfuA
locus tag: VA249_RS00700
old locus tag: VYA_01270
so part of: sequence
location: complement(150058..150642)
location: region:150058-150642:-1
so has part: feature:150058-150642:-1:exon
subclass of: SO_0000010

position:150058:-1
position: 150058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150642:-1
position: 150642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150058-150642:-1:exon

VA249_RS00700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: nfuA
locus tag: VA249_RS00700
old locus tag: VYA_01270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008075675.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]; GO:0051604 - protein maturation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fe-S biogenesis protein NfuA
translation: MSNITITETAQTHFANLLGQQPEGTNIRVFVVNPGTQNAECGVSYCPPEAVEATDTEITFSGFSAFIDELSLPFLEDAEIDFATDKMGSQLTLKAPNAKMRKVADDAPLVERVEYVIQTQVNPQLAGHGGHVNLVEITEDGIAIVAFGGGCNGCSMVDVTLKEGIEKELLNQFVGELTAVRDATEHDRGDHSYY
SIO_010081: VA249_RS00700
subclass of: SO_0000673
so part of: VA249_RS00700
location: complement(150058..150642)
location: region:150058-150642:-1
so has part: feature:150058-150642:-1:exon

WP_128812012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150058-150642:-1:exon

VA249_RS00705
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00705
so part of: sequence
location: complement(150740..151510)
location: region:150740-151510:-1
so has part: feature:150740-151510:-1:exon
subclass of: SO_0000010

position:150740:-1
position: 150740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151510:-1
position: 151510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150740-151510:-1:exon

VA249_RS00705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009707962.1
GO process: GO:0009116 - nucleoside metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosyltransferase family protein
translation: MLSHQWQNIMHRVLGSQCGLCRLPIDAYQATNPLRWCEHCFAQLNSIQRCARCGLSMINEQGSANGLVSANPAPQIDQAKTQCGACLRDPPPWQRLFTLGDYDFPLSVQVQRFKDHAEPWHVNALTQLLAQRIEHPAPVITCVPLHWQRYLKRGFNQSHTLARYLANHLEVRFEPNVFKRIKSAPSQRGHKKSNRELNLKGAFALKGKVRDSHVAIVDDVVTTGSTVRQLCDLLLEVGVESIDIYCICRTPAPGSL
SIO_010081: VA249_RS00705
subclass of: SO_0000673
so part of: VA249_RS00705
location: complement(150740..151510)
location: region:150740-151510:-1
so has part: feature:150740-151510:-1:exon

WP_221068484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150740-151510:-1:exon

VA249_RS00710
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: bioH
locus tag: VA249_RS00710
old locus tag: VYA_01300
so part of: sequence
location: 151595..152359
location: region:151595-152359:1
so has part: feature:151595-152359:1:exon
subclass of: SO_0000010

position:151595:1
position: 151595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152359:1
position: 152359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151595-152359:1:exon

VA249_RS00710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: bioH
locus tag: VA249_RS00710
old locus tag: VYA_01300
EC number: 3.1.1.85
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005529108.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0009102 - biotin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pimeloyl-ACP methyl ester esterase BioH
translation: MSTNLHWRSFGQGPDLVLLHGWGMNGAIWEQTVTSLEPYFRVHIVDLPGYGHSAAHHAESLAQIADMVLSNAPDRAVWLGWSLGGLVATHIALNAPERVTKLITVASSPKFAAERPWRGIQPNVLTAFTSQLLEDFSVTIERFMALQAMGSPSARKDVKQLKQAVLSRPQPNPDSLLVGLNILADVDLRDALHGLSMPMLRLYGRLDGLVPIKVASDLSEQLPNTQQFVFEQSSHAPFMTEHDAFCLRVREFAA
SIO_010081: VA249_RS00710
subclass of: SO_0000673
so part of: VA249_RS00710
location: 151595..152359
location: region:151595-152359:1
so has part: feature:151595-152359:1:exon

WP_221068485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151595-152359:1:exon

VA249_RS00715
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00715
old locus tag: VYA_01310
so part of: sequence
location: 152489..152953
location: region:152489-152953:1
so has part: feature:152489-152953:1:exon
subclass of: SO_0000010

position:152489:1
position: 152489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152953:1
position: 152953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152489-152953:1:exon

VA249_RS00715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00715
old locus tag: VYA_01310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005379316.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent Lon protease
translation: MIVSPANISVPLIAPSVNVQTEQVARENKVREPITPTVALAKTNAERKVTSDEKRRRQSSWDPSDHPDYQIDPDVDSHYHEEPEDALARLFGLLALKSYSEDQGKGYTIRFRLPKRILDAAIKQGVMEKRRKVIKFHYGHAVAPHTPSEVIAIL
SIO_010081: VA249_RS00715
subclass of: SO_0000673
so part of: VA249_RS00715
location: 152489..152953
location: region:152489-152953:1
so has part: feature:152489-152953:1:exon

WP_221068486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152489-152953:1:exon

VA249_RS00720
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00720
old locus tag: VYA_01320
so part of: sequence
location: complement(153069..155387)
location: region:153069-155387:-1
so has part: feature:153069-155387:-1:exon
subclass of: SO_0000010

position:153069:-1
position: 153069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155387:-1
position: 155387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153069-155387:-1:exon

VA249_RS00720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00720
old locus tag: VYA_01320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009698972.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tex family protein
translation: MSQAICRMIAQELNVRPEQVNAAVTLIDDGNTVPFIARYRKEVTGGLDDTQLRTLDSRLSYLRELDDRRQTILKSIQEQGKLTAELEQAIKQADSKTRLEDLYLPYKPKRRTKGQIAIEAGLEPLADILWNHPQTEPESEASKYLDADKGVADTKAALDGARAIIMERIAEDANLLEKIRNHLNRNAEMVARVVEGKENDGEKFKDYFNHNEPLSKVPSHRALAMLRGRNEGFLTLAMNADPEQEDGVRQSYCETIIADHYGVTLSSAPADTWRKQVISWAWRIKVSMHMETELMGAMKERAEIEAIEVFATNLKDLLMAAPAGPRATLGLDPGLRTGSKIAIVDPTGKVLATETIYPHPPQKQYDKSAQVVDQLVRKYNVDLIAIGNGTASRETDSFVADVIKRGNLKVQKIIVSEAGASVYSASELAAKEFPNMDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSMLAKRLDAIVEDCVNAVGVDVNTASAALLTRVAGLSSTIAQNIVDFRDENGRFDARTTLKKVPRLGPKAFEQCAGFLRIMDGKNPLDASAVHPEAYPVVKAISEKNSKDIKALIGDSSFLKNLHAIDYTNDNFGLPTVTDIIKELDKPGRDPRPEFKTATFAEGVNAVSDLELGMILEGVVSNVANFGAFVDIGVHQDGLVHISALTDRFVSDPREVVKAGDIVKVKVMEVDVQRKRIALTMRLNDEPGQDNRSQRSETPRRHDQQRRQQPRRDDSSSNNAMGGAFAAAFAKAKK
SIO_010081: VA249_RS00720
subclass of: SO_0000673
so part of: VA249_RS00720
location: complement(153069..155387)
location: region:153069-155387:-1
so has part: feature:153069-155387:-1:exon

WP_221068487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153069-155387:-1:exon

VA249_RS00725
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00725
old locus tag: VYA_01330
so part of: sequence
location: 155597..157477
location: region:155597-157477:1
so has part: feature:155597-157477:1:exon
subclass of: SO_0000010

position:155597:1
position: 155597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157477:1
position: 157477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155597-157477:1:exon

VA249_RS00725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00725
old locus tag: VYA_01330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005434462.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RimK/LysX family protein
translation: MMKKMSLALALSSALLATPLAWSQSLSATTQAPVYQLDDKPVLGRVESVHYSDIPELSGVPFIGKIDTGADTTSMHADNIHVTSSNPEYKDLKDDKLMWAIVDDLGGTNAKWTAESFKPYQVTVSFTLHHPYTGEEVKITDDLDRISAIRSRTSEKPILRPTVKMPMTIAGHTVDTVVNLTKRTQFSAPVLIGKTYLDNNAWVFAGYDYLQEQPNAQMIGKKETVSIEGLPYKVSISTSSRYTNVHALNIKVDKKKQQVSFTLEGENGKRHSMTLPLIRMLKTSKGERPLVYLPVKVSETETQQWLVYLRDRSGFSSQIRLGKDVASQHFVIDTDRENLLGGVEKSFKNALKSKPLVISPEESVNIDGYSLPAYPTFTVKTPLLRVNGFELTTKDKKEVVTFYLPTSNGKEEKITKPVLKKLKVGDAVRPVVEGDFILGDKQTSVKFAIDLLEKDQQQPFFVFGHNMAKGGVLLNTRADHLLDAQTLFKAGHIEVAEVEGLSFPVKLDTGADVSSINAQNIKQFEKDGKKMVSFNYENDAGMKKAFTKPVVDVMRITAKKGEKANERPVVEMHVKLGELEKKIRVNLQDRSRFHYSMILGKNFLKHGAVVASDTNYIVTEKPDYEE
SIO_010081: VA249_RS00725
subclass of: SO_0000673
so part of: VA249_RS00725
location: 155597..157477
location: region:155597-157477:1
so has part: feature:155597-157477:1:exon

WP_221068488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155597-157477:1:exon

VA249_RS00730
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: greB
locus tag: VA249_RS00730
old locus tag: VYA_01340
so part of: sequence
location: complement(157647..158132)
location: region:157647-158132:-1
so has part: feature:157647-158132:-1:exon
subclass of: SO_0000010

position:157647:-1
position: 157647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158132:-1
position: 158132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157647-158132:-1:exon

VA249_RS00730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: greB
locus tag: VA249_RS00730
old locus tag: VYA_01340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005448472.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO process: GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription elongation factor GreB
translation: MKTNLITREGYNRLKTELDFLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLRKRLEQVKVVDFDPQQEGKVFFGAWVEIENEAGDVKSFRIVGPDEIYGDAKGYISIDSPMARALLKKEVDDEFSVKTPEGFKEWFINSIRYQAEEQ
SIO_010081: VA249_RS00730
subclass of: SO_0000673
so part of: VA249_RS00730
location: complement(157647..158132)
location: region:157647-158132:-1
so has part: feature:157647-158132:-1:exon

WP_211915587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157647-158132:-1:exon

VA249_RS00735
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: ompR
locus tag: VA249_RS00735
old locus tag: VYA_01350
so part of: sequence
location: 158347..159066
location: region:158347-159066:1
so has part: feature:158347-159066:1:exon
subclass of: SO_0000010

position:158347:1
position: 158347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159066:1
position: 159066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158347-159066:1:exon

VA249_RS00735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: ompR
locus tag: VA249_RS00735
old locus tag: VYA_01350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014646135.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: two-component system response regulator OmpR
translation: MQENHKILVVDDDARLRALLERYLSEQGFQVRSVANGEQMDRLLTRENFHLMVLDLMLPGEDGLSICRRLRHANNMLPILMLTAKGDEVDRIVGLEVGADDYLPKPFNPRELLARIKAVLRRQTVELPGAPSTEEKVVEFGEFRLNLGTREMFRGEEAMPLTSGEFAVLKALVTNAREPMSRDKLMNMARGREYSAMERSIDVQISRLRRMLEDDPSKPRYIQTVWGLGYVFVPDGKEA
SIO_010081: VA249_RS00735
subclass of: SO_0000673
so part of: VA249_RS00735
location: 158347..159066
location: region:158347-159066:1
so has part: feature:158347-159066:1:exon

WP_045460431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158347-159066:1:exon

VA249_RS00740
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: envZ
locus tag: VA249_RS00740
old locus tag: VYA_01360
so part of: sequence
location: 159273..160565
location: region:159273-160565:1
so has part: feature:159273-160565:1:exon
subclass of: SO_0000010

position:159273:1
position: 159273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160565:1
position: 160565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159273-160565:1:exon

VA249_RS00740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: envZ
locus tag: VA249_RS00740
old locus tag: VYA_01360
EC number: 2.7.13.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010445027.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO process: GO:0016310 - phosphorylation [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: two-component system sensor histidine kinase EnvZ
translation: MRIRSSFTQSILLFVSLLLASQVFSYYAVFNYALMPSLQQFNKILAHELNLVLDEDGLLKSDAPLRHQLLENLGVTVHSVDSEMMNEFNHAMSIDLMSEEMSQELGSPTEVRLLLGSESYILWMRIDELPNSIIRVPLSELQEEDFAPLFRNSLMMALLIIAGGWLFIRLQNRPLIELEKAAKGVGRGEIPPPLPEKGASEIRSVTRAFNQMSKGIQELEEDRALLMAGISHDLRTPLTRIRLATEMMSPEDSYLAEGIISDTEECNEIISQFMDYLKPVNKESFEQVDINTITSDVATSEGGYEVEIETDLNANIPTAKGSPIAIKRAVSNLVVNALRYGNGWVKVSTGTTADKQLVWVCVEDNGPGIEPSQIAKLFEPFTRGDTARGSEGTGLGLAIVKRIVSQHSGSVIIRNRSEGGLIAQISFPTK
SIO_010081: VA249_RS00740
subclass of: SO_0000673
so part of: VA249_RS00740
location: 159273..160565
location: region:159273-160565:1
so has part: feature:159273-160565:1:exon

WP_221068489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159273-160565:1:exon

VA249_RS00745
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00745
old locus tag: VYA_01370
so part of: sequence
location: complement(160652..162046)
location: region:160652-162046:-1
so has part: feature:160652-162046:-1:exon
subclass of: SO_0000010

position:160652:-1
position: 160652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162046:-1
position: 162046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160652-162046:-1:exon

VA249_RS00745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00745
old locus tag: VYA_01370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005384732.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uracil-xanthine permease family protein
translation: MTTSNRPSELVYQLNDRPPLPQTIFAALQHLLAMFVAVITPSLIICQSLGVPAEQTNTIISMSLFASGVSSFIQIRTFGPIGSGLLSIQGTSFNFLGPIIGAGLSLQAGGADLNTMMAAIFGTILVASFAEIFLSRVLEHARRIITPLVSGIVVTLIGLTLIQVGLVSMGGGYAAMSDGSFGSLDKLALAGTVLGLIVILNRSKNPYLRVASIVIAMLVGYVMAYFMGMVDTSKLGQTDLIALPIPMQYGLGFDWSLFIPLVLIFFITALEAIGDITATSEVSGEPVKGPIYMKRIKGGVLADGLNSAIAAVFNSFPNSTFSQNNGIIMLTGVASRYVGYFIAGMLVILGLFPGVASFVQLIPEPVLGGATIVMFGTIAAAGVRIISRVELDRRAILIMALSFSMGLGIAQKPEILQFMPDFIKSIFSTGVAAGGITAIILNLLLPEKLEEDTEELVTQEVKSS
SIO_010081: VA249_RS00745
subclass of: SO_0000673
so part of: VA249_RS00745
location: complement(160652..162046)
location: region:160652-162046:-1
so has part: feature:160652-162046:-1:exon

WP_164837230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160652-162046:-1:exon

VA249_RS00750
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00750
old locus tag: VYA_01380
so part of: sequence
location: complement(162295..164280)
location: region:162295-164280:-1
so has part: feature:162295-164280:-1:exon
subclass of: SO_0000010

position:162295:-1
position: 162295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164280:-1
position: 164280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162295-164280:-1:exon

VA249_RS00750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00750
old locus tag: VYA_01380
EC number: 3.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005529122.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S9 family peptidase
translation: MNKSKRLAVTAVTIAALYTTPVFAKDQQNAPLTSAELFSKSSAYFNPKISPDGKHLAFESNIDGKDALVILNAKTMQPSSVLRFNGNEQVGDYYWINNERVVASKEYLKSWSTAPVSYGELVSANVDGKKYAYIFGYNPPKSSKLIRSASIVKAFGHVLDILPDDDRHILVSALPIGDYKFDIERPSEVYRVNVYNGRRSKITTSPVGFSRFLTDHNGEVRFVSGLNSKNKVELYYRVNEQWRSSDKIQSLKSFKEFYPISFGSNQDSVYAAVSYKGEPRAVHHLNLKTGESTKVASDASVDPKNYWLDPDSKQLYAVEFESDYPTYAFVDPKNKRSEYLQQILTSLPGHQVRLVSETDAGDAYVIMAFNDRNPGDYYLFTTQPKEIRYLFSAREWLDPAKMAEVKPVEFTSRDGKRITGYLTLPPNAEPKKLPLIVNPHGGPHGPRDWWEFREENQFLASHGYAVLQVNFRGSGGFGKQFEEAGYRKWGTNIQYDIIDATKHIISEGIADKQRVCISGGSFGGYSALKSASIAPDLFQCAVGTAGVYDLELMFKEGDVPDSKMGLSYLTEVLGEDPKILKAMSPTHNADKLKSAILLVHGGKDQRAPIEQFNAMTKALDNIKYPYEAFVLDDEGHGFYKDEHRAKYYAHVLNFFDKHLKN
SIO_010081: VA249_RS00750
subclass of: SO_0000673
so part of: VA249_RS00750
location: complement(162295..164280)
location: region:162295-164280:-1
so has part: feature:162295-164280:-1:exon

WP_221068490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162295-164280:-1:exon

VA249_RS00755
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: recG
locus tag: VA249_RS00755
old locus tag: VYA_01390
so part of: sequence
location: complement(164537..166618)
location: region:164537-166618:-1
so has part: feature:164537-166618:-1:exon
subclass of: SO_0000010

position:164537:-1
position: 164537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166618:-1
position: 166618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164537-166618:-1:exon

VA249_RS00755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: recG
locus tag: VA249_RS00755
old locus tag: VYA_01390
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020335704.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent DNA helicase RecG
translation: MSAQMLSAVPLSSLSGVGAKVAEKLAKVGLHSVQDLLFHLPLRYEDRTRIYPIAKLHAGLWAAVQGRVMAVDTIFGKRKMLTVKISDGNGTITLRFFNFTAAIKNNFSQGKLVHAYGEVKRGGIGLEIVHPDYKFYVSEQKPDVEQSLTPVYPTTDGLRQITLRNLTEQALALLDKAAVQELLPSGLYDHQITMSQALHTIHRPPPSINVDEFDEGKHPAQIRLIMEELLAQNLSMLAVRSKGQQDVALPLASCEHLKNQLLAQLPFSPTNAQARVVKEIEADLEKAHPMMRLVQGDVGSGKTLVAALAAVRAIEHGYQVALMAPTELLAEQHAINFANWFEKMGVKVGWLAGKLKGKAKETELARIASGEAQMVVGTHALFQEHVEFHHLALVIIDEQHRFGVHQRLELREKGAKQGAYPHQLIMTATPIPRTLAMTAYADLETSVIDELPPGRTPIQTVAIPDTKRDDIVERVRNACLNEGKQAYWVCTLIDESEVLEAQAAADTAEELQRKLPDVKIGLVHGRMKPAEKQAVMQDFKDNKLHLLVATTVIEVGVDVPNSSLMIIENPERLGLAQLHQLRGRVGRGSVASHCVLLYHSPLSKTAQKRLGVLRESNDGFVIAQKDLEIRGPGELLGTKQTGLADFKIADLVRDQRLIPEVQRIARYIHDNYPANANAIIDRWLGERDIYSKA
SIO_010081: VA249_RS00755
subclass of: SO_0000673
so part of: VA249_RS00755
location: complement(164537..166618)
location: region:164537-166618:-1
so has part: feature:164537-166618:-1:exon

WP_211915585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164537-166618:-1:exon

VA249_RS00760
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: trmH
locus tag: VA249_RS00760
old locus tag: VYA_01400
so part of: sequence
location: complement(166834..167517)
location: region:166834-167517:-1
so has part: feature:166834-167517:-1:exon
subclass of: SO_0000010

position:166834:-1
position: 166834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167517:-1
position: 167517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166834-167517:-1:exon

VA249_RS00760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: trmH
locus tag: VA249_RS00760
old locus tag: VYA_01400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006880826.1
GO function: GO:0008173 - RNA methyltransferase activity [Evidence IEA]; GO:0009020 - tRNA (guanosine-2'-O-)-methyltransferase activity [Evidence IEA]
GO process: GO:0030488 - tRNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (guanosine(18)-2'-O)-methyltransferase TrmH
translation: MNLERYNRIHQVLKARQTDLTLCLEEVHKPNNVSAVIRTADATGLHKVHAIWPDKMRTLTHTSAGARNWVEVETHNTIETAITELKAQGMQVLVTNLSDTAVDFRDIDYTKPTAIILGSEKVGASEQAKKLADHDIIIPMIGMVQSLNVSVASAVILYEAQRQREAAGMYNREESALPKETINRILFERGHPVLAKVAKRKGLDYPQLDDEGQIIADEAWWKEMQSK
SIO_010081: VA249_RS00760
subclass of: SO_0000673
so part of: VA249_RS00760
location: complement(166834..167517)
location: region:166834-167517:-1
so has part: feature:166834-167517:-1:exon

WP_128811996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166834-167517:-1:exon

VA249_RS00765
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: spoT
locus tag: VA249_RS00765
old locus tag: VYA_01410
so part of: sequence
location: complement(167572..169692)
location: region:167572-169692:-1
so has part: feature:167572-169692:-1:exon
subclass of: SO_0000010

position:167572:-1
position: 167572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169692:-1
position: 169692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167572-169692:-1:exon

VA249_RS00765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: spoT
locus tag: VA249_RS00765
old locus tag: VYA_01410
EC number: 2.7.6.5
EC number: 3.1.7.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010895463.1
GO function: GO:0008728 - GTP diphosphokinase activity [Evidence IEA]; GO:0008893 - guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity [Evidence IEA]
GO process: GO:0015969 - guanosine tetraphosphate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
translation: MYLFDSLKDVAQEYLTEPQIEALRQSYVVARDAHEGQTRSSGEPYIIHPVAVARILAEMRLDIETLQAALLHDVIEDCDVSKEDLEEKFGTTVAELVDGVSKLDKLKFRDRKEAQAENFRKMVLAMVQDIRVILIKLADRTHNMRTLGALRPDKKRRIARETLEIYSPLAHRLGIHNIKTELEELGFEALYPNRYRVLKEVVKAARGNRKEMIQRIHSEIEGRLEDVGLNARVLGREKNLFSIYNKMKTKEQRFHTIMDIYAFRVVVDTADTCYRVLGQVHSLYKPRPGRMKDYIAVPKANGYQSLHTSMVGPHGVPVEVQIRTEDMDQMADKGVAAHWSYKDKGERSGTTAQVKAQRWMQSLLELQQSAGNSFEFIENVKSDLFPDEIYVFTPKGRIVELPLGATAVDFAYAVHTDVGNSCVGTRVDRNPYPLSKALKNGQTVEIISAPGARPNAAWLNYVVTSRARTKIRQVLKTMRREESITLGRRLLNHALGRHSIDSIYPENIQEVLTDLRLESVDDLLAAIGLGELMSIVIARRLLGDTDELTTTSSIPNDSSKKLPIRGAEGLLLTFANCCHPIPDDHIIAHVSPGRGLVVHRETCPNVRGYQKEPDKYMAVAWSEDYDKEFIAELKVDMLNNQGALAELTNVISKTGSNIHGLSTEERDGRLYTVTVLLTTKDRVHLAGIMRKIKAMPQATRVRRRKN
SIO_010081: VA249_RS00765
subclass of: SO_0000673
so part of: VA249_RS00765
location: complement(167572..169692)
location: region:167572-169692:-1
so has part: feature:167572-169692:-1:exon

WP_128811995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167572-169692:-1:exon

VA249_RS00770
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rpoZ
locus tag: VA249_RS00770
old locus tag: VYA_01420
so part of: sequence
location: complement(169732..170004)
location: region:169732-170004:-1
so has part: feature:169732-170004:-1:exon
subclass of: SO_0000010

position:169732:-1
position: 169732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170004:-1
position: 170004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169732-170004:-1:exon

VA249_RS00770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rpoZ
locus tag: VA249_RS00770
old locus tag: VYA_01420
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005379346.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit omega
translation: MARVTVQDAVEKVGNRFDLVLIAARRARQMQTGGKDALVPEENDKPTVIALREIEEGLITKEVLDARERQEQQEQEAAELAAVSSIAHNR
SIO_010081: VA249_RS00770
subclass of: SO_0000673
so part of: VA249_RS00770
location: complement(169732..170004)
location: region:169732-170004:-1
so has part: feature:169732-170004:-1:exon

WP_005379346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:169732-170004:-1:exon

VA249_RS00775
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: gmk
locus tag: VA249_RS00775
old locus tag: VYA_01430
so part of: sequence
location: complement(170209..170832)
location: region:170209-170832:-1
so has part: feature:170209-170832:-1:exon
subclass of: SO_0000010

position:170209:-1
position: 170209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170832:-1
position: 170832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170209-170832:-1:exon

VA249_RS00775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: gmk
locus tag: VA249_RS00775
old locus tag: VYA_01430
EC number: 2.7.4.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017062466.1
GO function: GO:0004385 - guanylate kinase activity [Evidence IEA]
GO process: GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: guanylate kinase
translation: MGKGTLYIVSAPSGAGKSSLISAMLERNPTYAMKVSVSHTTRGMRPGEENGTHYHFVAKEEFETLIAQGDFLEYAEVFGNYYGTSRVWIEETLNKGIDVFLDIDWQGARQIREQMPEAKSIFILPPSNGELERRLTTRGQDSDEVIAKRMAEAKSEISHYNEYDYVIVNDDFDTALMDFKAILRAERLKEEKQAAKYKGMLDALLAE
SIO_010081: VA249_RS00775
subclass of: SO_0000673
so part of: VA249_RS00775
location: complement(170209..170832)
location: region:170209-170832:-1
so has part: feature:170209-170832:-1:exon

WP_128811994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170209-170832:-1:exon

VA249_RS00780
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00780
old locus tag: VYA_01440
so part of: sequence
location: 170865..171029
location: region:170865-171029:1
so has part: feature:170865-171029:1:exon
subclass of: SO_0000010

position:170865:1
position: 170865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171029:1
position: 171029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170865-171029:1:exon

VA249_RS00780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00780
old locus tag: VYA_01440
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKESIDIVNDSTGFDDFSTKHVEIGDKPARKMEAKSIMISERLLADLWDLCCQ
SIO_010081: VA249_RS00780
subclass of: SO_0000673
so part of: VA249_RS00780
location: 170865..171029
location: region:170865-171029:1
so has part: feature:170865-171029:1:exon

WP_211916559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170865-171029:1:exon

VA249_RS00785
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00785
old locus tag: VYA_01450
so part of: sequence
location: complement(171148..172362)
location: region:171148-172362:-1
so has part: feature:171148-172362:-1:exon
subclass of: SO_0000010

position:171148:-1
position: 171148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172362:-1
position: 172362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171148-172362:-1:exon

VA249_RS00785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00785
old locus tag: VYA_01450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020195420.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKAYTKLLASLVFISGAYCAPAFASNPELSDRTFRTVNKVQELIAEEKYSQAIEKLNAALKGSSKKQYDKAVLLQQMGFLYSLKDNYPKAAKYFADALKLDALPVPVAQQVRYSLAQLYLAEGQFRKSVNTMNEWFKISETTEEKPQAHAYITLASAYIQLEDYKNAIPPTKKAIAMSKNPSESWYQLLMSAHYELKQFKSVAGVLKILTTKYPQNKRYWTQLSGIYMELNQERNALSTLEMAYKLGLLEEEKEYLRLVNFQAYQGVPFRAAKTMQTSMDEGKITRDAKNLEKLASFWQQAQELDKSIETYVAAYKLAPKAKTQIKIARLMILDKQYSAATKFAKNAAPDAKRDDKGELNYIRGMAYFELNQPSNALKAMKSAAQSPDMKAVAGPWINFLESQG
SIO_010081: VA249_RS00785
subclass of: SO_0000673
so part of: VA249_RS00785
location: complement(171148..172362)
location: region:171148-172362:-1
so has part: feature:171148-172362:-1:exon

WP_221068491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171148-172362:-1:exon

VA249_RS00790
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00790
old locus tag: VYA_01460
so part of: sequence
location: complement(172374..173003)
location: region:172374-173003:-1
so has part: feature:172374-173003:-1:exon
subclass of: SO_0000010

position:172374:-1
position: 172374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173003:-1
position: 173003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172374-173003:-1:exon

VA249_RS00790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00790
old locus tag: VYA_01460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010650172.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: energy transducer TonB
translation: MRYLASIALALVVSLGLFWGMDKLVNKERHELVSDDDLRMVEFIRIKPDEKIQEKKRELPKPPPPKRPPPPPEMKVTSTVKPVMDQIPMDMPKLDLPVNVTGGSVLGHYAQGGAKLAGGGGPVPLATFQPQMPRKAARAGIEKGIVLVEFTVNERGAVQDVKVLKESPRKLGLGKAARKTVSKWTFKPKMVDGKAVTSRLSQEIEFSTN
SIO_010081: VA249_RS00790
subclass of: SO_0000673
so part of: VA249_RS00790
location: complement(172374..173003)
location: region:172374-173003:-1
so has part: feature:172374-173003:-1:exon

WP_128811992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172374-173003:-1:exon

VA249_RS00795
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00795
old locus tag: VYA_01470
so part of: sequence
location: complement(173008..173415)
location: region:173008-173415:-1
so has part: feature:173008-173415:-1:exon
subclass of: SO_0000010

position:173008:-1
position: 173008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173415:-1
position: 173415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173008-173415:-1:exon

VA249_RS00795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00795
old locus tag: VYA_01470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020195418.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biopolymer transporter ExbD
translation: MKRRYSSDSSEEAAIDMTPMLDIVFIMLIFFIVTTSFVKEAGLEVNRPTASSAQTVKKGNIMVAIGAAGDVWVDKRRIEVDAVRANIERLRAESPDGAVVIQADTESNAGVVVKVMDQIKMAGVESISIAATNKD
SIO_010081: VA249_RS00795
subclass of: SO_0000673
so part of: VA249_RS00795
location: complement(173008..173415)
location: region:173008-173415:-1
so has part: feature:173008-173415:-1:exon

WP_128811991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173008-173415:-1:exon

VA249_RS00800
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00800
old locus tag: VYA_01480
so part of: sequence
location: complement(173460..173987)
location: region:173460-173987:-1
so has part: feature:173460-173987:-1:exon
subclass of: SO_0000010

position:173460:-1
position: 173460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173987:-1
position: 173987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173460-173987:-1:exon

VA249_RS00800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00800
old locus tag: VYA_01480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005529134.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MotA/TolQ/ExbB proton channel family protein
translation: MWWLVGELESIRRFLGMGGDVLVAIFILSFMLWAVLLERWFYFAAVAPRAMKKAVSFWEDRSEHKSWNAKMIRQEIVSRQDIENKKGLPIVKVLIALCPLLGLLGTVVGMIQVFDILAVTGTGSPRAMASGISKATIPTLAGMVASLSGLFFSTRLDHLAKVTTQKLEDKLKHIS
SIO_010081: VA249_RS00800
subclass of: SO_0000673
so part of: VA249_RS00800
location: complement(173460..173987)
location: region:173460-173987:-1
so has part: feature:173460-173987:-1:exon

WP_128811990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173460-173987:-1:exon

VA249_RS00805
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00805
old locus tag: VYA_01490
so part of: sequence
location: complement(173997..175358)
location: region:173997-175358:-1
so has part: feature:173997-175358:-1:exon
subclass of: SO_0000010

position:173997:-1
position: 173997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175358:-1
position: 175358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173997-175358:-1:exon

VA249_RS00805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00805
old locus tag: VYA_01490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005384750.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MotA/TolQ/ExbB proton channel family protein
translation: MKGFKTLAAGLLASLFMVSGVQAETPKNLSELLKNVKSESIVESKENKAREAEFKNNRDQQAALLEKARAELAAQQALGDELKATFDENDKQLTDLTETLRVRSGTLGEMFGVVRQYAGEFKGLFAASQNAVQFPERDALLSKLAESKELPSTQELEAFWHTILQQVVASGETTTTQATVVYGEGKEAVQDVTLVGEFNAIADGKYVTYVPQTGKFEELSRQPAKNITRLVGGFEAADGTYEPLFIDPSRGVILSLLVQSPTVQERIDQGGIVGYVILAMGAVGALIALVCYLRLLVIGGKMRKQAKSDTVIPGNPLGEVIQAYQEHKGDNLEDLEAKLDEIILRNAPSIERFISSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGTGDPKLMAGGISEALVTTMLGLVVAIPLLFLYTIVHSKGRRLVQTLEEQSAGFIARYQEKLHKAES
SIO_010081: VA249_RS00805
subclass of: SO_0000673
so part of: VA249_RS00805
location: complement(173997..175358)
location: region:173997-175358:-1
so has part: feature:173997-175358:-1:exon

WP_221068492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173997-175358:-1:exon

VA249_RS00810
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00810
old locus tag: VYA_01500
so part of: sequence
location: complement(175362..176126)
location: region:175362-176126:-1
so has part: feature:175362-176126:-1:exon
subclass of: SO_0000010

position:175362:-1
position: 175362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176126:-1
position: 176126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175362-176126:-1:exon

VA249_RS00810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00810
old locus tag: VYA_01500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014230567.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3450 domain-containing protein
translation: MTLKEFGVSAVTAAILSVSSAAMAADSGTVVANQAKTTKSSQASQQKIDNYAESAETMLAEYKGLLRQIDSMKVYNEQINRMVQSQQGELDSLNNQIAQIDQTATEVVPLTLKMIDALDEFVTLDLPFQKEERNKRVVELRDLMDRADVTTSEKFRKVMEAYQIEEGFSRSIESYKASLERNGETVTYDFLRIGRTALLFQSPDGGETGMWNQQTRQWESLPENYRIAVQQGLRIAKKQAPPALIKLPVFAGEE
SIO_010081: VA249_RS00810
subclass of: SO_0000673
so part of: VA249_RS00810
location: complement(175362..176126)
location: region:175362-176126:-1
so has part: feature:175362-176126:-1:exon

WP_128811986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175362-176126:-1:exon

VA249_RS00815
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00815
old locus tag: VYA_01510
so part of: sequence
location: complement(176200..178806)
location: region:176200-178806:-1
so has part: feature:176200-178806:-1:exon
subclass of: SO_0000010

position:176200:-1
position: 176200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178806:-1
position: 178806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176200-178806:-1:exon

VA249_RS00815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00815
old locus tag: VYA_01510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020195417.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB-dependent receptor
translation: MYKNTTALSVAISLALGTVAVAPMAAQAEEQQVEKLQKMKVTGSRLTRASMEGSTPVAVIGRAEIERAGDISIADVLRKSSFNSFGSYSESSGNSWQSQATMSLRGLGASRTLVLINGKRLPGSATMGGGAANLNVIPAAIVERVEVMADGGSAVYGSDAVAGVVNVILKDEFDGINVTVGAGVPSQDGGDEQNFSIVTGTSGEKGNIYFSFEHDSKDEIYLRDRDYLSSKNTGSDNYFDMSGVSIYGRNIYHNGALKPIAGYETDAKCDPSKGFVGITEYPGLGPMCGYDYTAEAAQTASLERNTVFVNGNIFLTDTTTFNAQMLLSRNESFGRFAPAAGYFEIDPTTTGGEAFFDENGLDKTKGPASIYYRFTGVGTRDTTVTDFQADMKAGLDGSFYTDGFGEVIWEAGYHLNYSNSNERGTGYVLRNPAESLANSGEFVNGEFSADATADLAATTARESQMEMHQFNGGLQFDVAEVGDITIPLYVGAEMTTYDYFDQYDSQSEAGNIIGSAGNSAAGDRETYAFFAESLVAFTDELEMNVAVRYDHYSDFGGAVSPKASFRYQPLDNLMFRAGAGMGFRAPSLSNLYGADSESNDYAKDYVYCEANGISDAECPEKQYTTTRTSNEDLDAETSTSFNFGVSYSPIEDLGLTVDYYNIRIEDTIVMNTLQSMIDQERSSGQSNPNITREGGSTGNITSAIVPLSNIGDLETSGLDLKVNYLYDFDVTTVRYDFMGSYVLDYSSPEYVGGPTNNKVGRNGLPEYRFQTGVGFNILSDHDIYVSADYIASQAQDVDKNYNKTGKIPSYTTFNVAYNYMAPWDAKLTAGVRNLTDEDPAFEADGVTYNDELYSIQGRVFFVNYSQNF
SIO_010081: VA249_RS00815
subclass of: SO_0000673
so part of: VA249_RS00815
location: complement(176200..178806)
location: region:176200-178806:-1
so has part: feature:176200-178806:-1:exon

WP_221068493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176200-178806:-1:exon

VA249_RS00820
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00820
old locus tag: VYA_01520
so part of: sequence
location: 179623..180648
location: region:179623-180648:1
so has part: feature:179623-180648:1:exon
subclass of: SO_0000010

position:179623:1
position: 179623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180648:1
position: 180648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179623-180648:1:exon

VA249_RS00820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00820
old locus tag: VYA_01520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014230569.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease subunit
translation: MLSYFLRRLALVIPTFLGITILIFAITRFVPGGPVERMLSQMQAQGDGAASMTSAGGNTALSDEQIAELNAFYGLDKPVVEAYVDWLTRLVQLDLGESTRYYEPVSDMIAERLPVSLFYGGMTFFISYFISIPLGYYKALKHGSVFDSTSSILIFVGYALPGYVVGVLLITLFSYHLEWFPMGGFVGDDFDDYETFFERAQDVMWHAVLPLICYLIGDFATLTMTMKNNLMENLSSDYIRTAIAKGLPFKKAVRKHALRNSLIPIASHFGNSLLFFMTGAFLIEVIFNIDGIGLLGYESIMERDYPVVMGIVAINAVLLLIGNIISDVCVALVDPRVKFGA
SIO_010081: VA249_RS00820
subclass of: SO_0000673
so part of: VA249_RS00820
location: 179623..180648
location: region:179623-180648:1
so has part: feature:179623-180648:1:exon

WP_221068494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179623-180648:1:exon

VA249_RS00825
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00825
old locus tag: VYA_01530
so part of: sequence
location: 180650..181693
location: region:180650-181693:1
so has part: feature:180650-181693:1:exon
subclass of: SO_0000010

position:180650:1
position: 180650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181693:1
position: 181693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180650-181693:1:exon

VA249_RS00825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00825
old locus tag: VYA_01530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005430115.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease subunit
translation: MIKVSPLTQKKIRHFKEIKRGYWSFLILTTMLVLSLFAELLINSKALVVKYDDSYYFPVVSDVRLGSEFGQASSSEANYRELQKVFEAEGGDNFVILPIVPWNPYEQDFSGDFPPTAPNAENKHYLGTDVIGRDILARLVYGFRTAMGFALITMAVSYAIGTAVGCAMGFWGGKFDLFVQRLIEIWSMVPFLYVIMILVSIVHPTFTLFVAINVLFGWMGMTWYMRTMTYKESAREYVMAARALGASTGRILFNHILPNTMVMIVTLAPFTIAANITALTALDYLGLGLMPPTPSWGELLQQGKSNLDSPWIVASVVSSIVLVLVMVTFIGEAIRAAFDPKKFTRYV
SIO_010081: VA249_RS00825
subclass of: SO_0000673
so part of: VA249_RS00825
location: 180650..181693
location: region:180650-181693:1
so has part: feature:180650-181693:1:exon

WP_221068495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180650-181693:1:exon

VA249_RS00830
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00830
old locus tag: VYA_01540
so part of: sequence
location: 181786..183615
location: region:181786-183615:1
so has part: feature:181786-183615:1:exon
subclass of: SO_0000010

position:181786:1
position: 181786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183615:1
position: 183615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181786-183615:1:exon

VA249_RS00830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00830
old locus tag: VYA_01540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000734681.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: extracellular solute-binding protein
translation: MNKLFLAPMLSALSFGVMSATLPTDLNWQTNWDEPLFASEDAKFGGTYRTYVNSFPQTLRSVGPDSNSGFRGWFADDVPNLVSLHPDTLEWIPDLANEWAFGSDNKTVYFKLNPKAQWSDGKPVTADDFVFMLKFYRSKDIVAPWYNDYYTKVIGDVVKYDDHTLAFISATEKNQEDLLYTLGSLTPRPAHFYANPSKDENGDGIDDNFVRKYNFKSEPTTFAYYLDKVKKGKSVTFKHVGEDWWGYSNSYYKNRYNVEKVRFTVIRDADIAMKHFEKGKLDSFGLIMPTLWHDKSQSAPYQKGYINKFWGYNQYPEGAGGLWLNTAKPMLGDINVRKGITLASDFDGMIEKLTRGDYVRKPNPLGVGRGEYDLTDVEAPTFEPEKAVEYFVKAGFDKVGEDGIRMNEKGQRLSFAITYSFPTHTPRMSYLKEQAKLAGLEYTLNLVDGSSAFKYILNKKHEVAFLTMGTAEVPAYWEYFHSFNANKPQPNNHTNYSSPELDELIMAFKGEFDLDKKRALSRQIQSKVIDASVIVPGYMVPYTREGHWRWMQYPESPMTKRSASLFPNSFSPGLGVFWLDEDMKKATQKAMKSGKAFDPVIAVDDRYKL
SIO_010081: VA249_RS00830
subclass of: SO_0000673
so part of: VA249_RS00830
location: 181786..183615
location: region:181786-183615:1
so has part: feature:181786-183615:1:exon

WP_221068496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181786-183615:1:exon

VA249_RS00835
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00835
old locus tag: VYA_01550
so part of: sequence
location: 183625..184482
location: region:183625-184482:1
so has part: feature:183625-184482:1:exon
subclass of: SO_0000010

position:183625:1
position: 183625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184482:1
position: 184482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183625-184482:1:exon

VA249_RS00835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00835
old locus tag: VYA_01550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009707949.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MENDVILSVKDLEVEFITDDGPVKVLHGVNFDVRAGRTLGLVGESGSGKSVTSMSIMGLLPKPYGNIVNGEVNYRGTNLVTLPAAEMYAMRGDRISIIFQDPMTALNPVHSIGRQLCEVLELHRPELGKKDREAYAIEMLAKVKIPMPEKRLNEYPHNLSGGMRQRVMIAMALACKPDILICDEPTTALDVTVQASILELMNELQEETGMAMIFITHDLGVVAEVCDDVAVMYGGRIVEKAEIFELFDNPQHPYTERLMGLMPSLDNEPKQMIDIKPIDASMFAS
SIO_010081: VA249_RS00835
subclass of: SO_0000673
so part of: VA249_RS00835
location: 183625..184482
location: region:183625-184482:1
so has part: feature:183625-184482:1:exon

WP_221068497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183625-184482:1:exon

VA249_RS00840
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00840
old locus tag: VYA_01560
so part of: sequence
location: 184519..185358
location: region:184519-185358:1
so has part: feature:184519-185358:1:exon
subclass of: SO_0000010

position:184519:1
position: 184519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185358:1
position: 185358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184519-185358:1:exon

VA249_RS00840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00840
old locus tag: VYA_01560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005394930.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MAKEVLRIENLKQHFVSGKGLFKKGYTIKAVDGVSLSVSEGETLGLVGESGCGKSTLGRTILKLYEPTEGQIFFEGKDITKLSVKGMRPLRKDMQIVFQDPMESLNQRHTIGMILEEPFVIHKIGTPAERKQWVKELLVKVGLPETAVNRYPHEFSGGQRQRIGIARAIALKPKLLICDESVSALDVSVQAQILNLLLQLQQEMNLAIIFISHDLSVVKHVSDKVAVMYFGKVVEAGNAREIYANPQNDYTKKLLSAIPITHPKYRKKKRVAEKKQQVA
SIO_010081: VA249_RS00840
subclass of: SO_0000673
so part of: VA249_RS00840
location: 184519..185358
location: region:184519-185358:1
so has part: feature:184519-185358:1:exon

WP_128811974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184519-185358:1:exon

VA249_RS00845
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00845
old locus tag: VYA_01570
so part of: sequence
location: 185509..185934
location: region:185509-185934:1
so has part: feature:185509-185934:1:exon
subclass of: SO_0000010

position:185509:1
position: 185509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185934:1
position: 185934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185509-185934:1:exon

VA249_RS00845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00845
old locus tag: VYA_01570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005430195.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphate-starvation-inducible PsiE family protein
translation: MPSHLPKSFSRPFLKIFHLLEAVLLVAITLATVWAMVEEFIHIYVQKRVALDDILLMFIYLEVFAMVGQFVMNGKIPVRYPIYIAMMAIARYITLGMKELDSVMIVWLSLAAFILAAATLVIRVGHHYWPYIDNQTAEKDE
SIO_010081: VA249_RS00845
subclass of: SO_0000673
so part of: VA249_RS00845
location: 185509..185934
location: region:185509-185934:1
so has part: feature:185509-185934:1:exon

WP_221068498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185509-185934:1:exon

VA249_RS00850
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00850
so part of: sequence
location: 186101..186472
location: region:186101-186472:1
so has part: feature:186101-186472:1:exon
subclass of: SO_0000010

position:186101:1
position: 186101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186472:1
position: 186472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186101-186472:1:exon

VA249_RS00850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009698963.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRAKSTSTIYFLLSVLIAFVLSSGIARAEIPSTVNHTTTTESLHISYCDLTFSAATQDEPGCCEPGGTCFEKQCCSHGHASGSAVVETHLRSYEAPYRDELAVSKTVLYNSADMHSHYRPPIA
SIO_010081: VA249_RS00850
subclass of: SO_0000673
so part of: VA249_RS00850
location: 186101..186472
location: region:186101-186472:1
so has part: feature:186101-186472:1:exon

WP_221068499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186101-186472:1:exon

VA249_RS00855
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00855
old locus tag: VYA_01580
so part of: sequence
location: 186671..187666
location: region:186671-187666:1
so has part: feature:186671-187666:1:exon
subclass of: SO_0000010

position:186671:1
position: 186671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187666:1
position: 187666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186671-187666:1:exon

VA249_RS00855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00855
old locus tag: VYA_01580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017189975.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MTYKHLPIILFVSVCLIWGTTWFAMEVAVQTIPPIFATGLRFLIAAPLLIMLAHHLKQPLFFPKGKMFWMFVVAVFYFAIPFTLMIFGEQYISSGLASIIFANMPIAVMVTSSLFLGLRLRKSQIAGLLVAVLSLILILVKEMSLGGEDYIFGFLALGGAVIMHAVMYVFVEKFCKGIPVLTYNAFPSFVASALLFITSLIVEQPDISQFSMDSITAVIYLGMFASVGGIVAYFKLGQVSTPFTASICFLFFPLIALSLSTWIAGNSLSLVSGALLLPLLGGIFVTKAEPHFWQRFRVKSQEREIMVCEHCMKKLNAYSRVCIQHIGGNIK
SIO_010081: VA249_RS00855
subclass of: SO_0000673
so part of: VA249_RS00855
location: 186671..187666
location: region:186671-187666:1
so has part: feature:186671-187666:1:exon

WP_221068500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186671-187666:1:exon

VA249_RS00860
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00860
old locus tag: VYA_01590
so part of: sequence
location: complement(187842..188246)
location: region:187842-188246:-1
so has part: feature:187842-188246:-1:exon
subclass of: SO_0000010

position:187842:-1
position: 187842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188246:-1
position: 188246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187842-188246:-1:exon

VA249_RS00860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00860
old locus tag: VYA_01590
inference: COORDINATES: protein motif:HMM:NF033674.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NirD/YgiW/YdeI family stress tolerance protein
translation: MKKIITILISSLVLSASVLASENTIDQQGMLATSGGFDGPTQNDTLNTVEDVMNADWLVDGNKVTLIGHITMSLGHEQYTFADKTGNMTIKIDDDEWDGQNVTPNDKVKIVGEIEKNDSANAVDVDWVRILNKR
SIO_010081: VA249_RS00860
subclass of: SO_0000673
so part of: VA249_RS00860
location: complement(187842..188246)
location: region:187842-188246:-1
so has part: feature:187842-188246:-1:exon

WP_221068501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187842-188246:-1:exon

VA249_RS00865
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00865
old locus tag: VYA_01600
so part of: sequence
location: 188525..190090
location: region:188525-190090:1
so has part: feature:188525-190090:1:exon
subclass of: SO_0000010

position:188525:1
position: 188525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190090:1
position: 190090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188525-190090:1:exon

VA249_RS00865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00865
old locus tag: VYA_01600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006233756.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6056 family protein
translation: MTNLIRNQYFVTTAFITIFMLFLNLVFPLISDDFCHLLSPGNFDAVIHSYMTWNARVGELLSIFFTGLNGTSFAIVNTLIFAVILSTIFPLLFARQGTTKDDSLFILSFFTLLSLFTTFGAVFLWRAGAMNYAWSLAFCLLHFVVYRYYYAGITGWYERSNLLVVVIFCILSFMAGMSSFDLGALGCLIHLSILTYRKITHQPSKLRFIIPVFFYMLGFFVLYTAPGTSVRSQGFDEYVSLGQLITWLYTLELNTLASHYLDALGKSMNRTNYFIALASIACTYIVFKYQSEHRFMPISFLQWVLGYLGTLSLLTVLLFSNELPPSGEALGATILFSNFIVSVIALAFIIKSNSNVENKSIVSMLIFLHCILIVDVSAYSVGVIPTRRAYFTACVLCALILSTFVNLLWSSKVKKIVFIPLFVWVLFLTSIQTIGLRVTNNALVMEPLSALSNEDDLIIDNDYKMLKSKNFYDWGMLSSEESNFANNCFSQYYGINSTIQYSPTQYVSIIEYIEYLMTLKK
SIO_010081: VA249_RS00865
subclass of: SO_0000673
so part of: VA249_RS00865
location: 188525..190090
location: region:188525-190090:1
so has part: feature:188525-190090:1:exon

WP_221069764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188525-190090:1:exon

VA249_RS00870
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00870
old locus tag: VYA_01610
so part of: sequence
location: 190102..190449
location: region:190102-190449:1
so has part: feature:190102-190449:1:exon
subclass of: SO_0000010

position:190102:1
position: 190102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190449:1
position: 190449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190102-190449:1:exon

VA249_RS00870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00870
old locus tag: VYA_01610
inference: COORDINATES: protein motif:HMM:NF016060.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GtrA family protein
translation: MFTRYTLVGIFNTAVHFITFFFLISFGYSQGASNLIAFSLAVSCSYIINTKITFKAKYKLMDYAIYVIFMGLLSYLIGYLGDYLMLPSVLSLITFSSMSLVIGYRFSKFLFKKEK
SIO_010081: VA249_RS00870
subclass of: SO_0000673
so part of: VA249_RS00870
location: 190102..190449
location: region:190102-190449:1
so has part: feature:190102-190449:1:exon

WP_221068502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190102-190449:1:exon

VA249_RS00875
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00875
old locus tag: VYA_01620
so part of: sequence
location: 190449..191429
location: region:190449-191429:1
so has part: feature:190449-191429:1:exon
subclass of: SO_0000010

position:191429:1
position: 191429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190449-191429:1:exon

VA249_RS00875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00875
old locus tag: VYA_01620
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010650191.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
translation: MLISLVVPVFNEQETVETFYHAARNDCFLKTKNVEIVFVNDGSSDKTAPLIGKLVEQDSNVRLINFSRNFGKEPALFCGLEHSRGDIVIPMDVDLQDPIELIETMFHEWESGAKIVLAKRADRSRDHWMKRVTANYFYKVHNALSHSKIEENVGDFRLMDRRIVDIIISLQERNLFMKGLLSWPGFEPVIVEYKRPERCAGTTKFNTLKLLNLAVEGITNFSTSPLKLASYVGFGISFLSIIYGISIILQKLLFSIDVPGYASLMTVMVFLGGVQLITIGILGEYVGRIYTEVKARPQYVIDSIKESELRGSFVNTTPDTDSNPIG
SIO_010081: VA249_RS00875
subclass of: SO_0000673
so part of: VA249_RS00875
location: 190449..191429
location: region:190449-191429:1
so has part: feature:190449-191429:1:exon

WP_221069766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190449-191429:1:exon

VA249_RS00880
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00880
old locus tag: VYA_01630
so part of: sequence
location: complement(191552..192418)
location: region:191552-192418:-1
so has part: feature:191552-192418:-1:exon
subclass of: SO_0000010

position:191552:-1
position: 191552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192418:-1
position: 192418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191552-192418:-1:exon

VA249_RS00880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00880
old locus tag: VYA_01630
EC number: 3.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000640570.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YicC/YloC family endoribonuclease
translation: MIYSMTAYARKEVKSDWGSAVWEIRSVNQRYLETYFRMPEQFRALEPVLRERFRKRLARGKVECSLRFEANPAAKAELSINEALAQQVIKAAEQVMHMTGELSRINPFQVMQWPGVMETPEQNMDEINKQLLSAFDEAIDEFIEARGREGDNMKALIEQRLEAITSEVVKVRARMPEILEWQRERLFSKFEDAKVELDPSRVEQELILLAQKSDVAEELDRLDSHVKETTNILKKGGSVGRRLDFMMQEFNRESNTLASKSISTDITASGVELKVLIEQMREQIQNIE
SIO_010081: VA249_RS00880
subclass of: SO_0000673
so part of: VA249_RS00880
location: complement(191552..192418)
location: region:191552-192418:-1
so has part: feature:191552-192418:-1:exon

WP_128811966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191552-192418:-1:exon

VA249_RS00885
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rph
locus tag: VA249_RS00885
old locus tag: VYA_01640
so part of: sequence
location: 192593..193309
location: region:192593-193309:1
so has part: feature:192593-193309:1:exon
subclass of: SO_0000010

position:192593:1
position: 192593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193309:1
position: 193309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192593-193309:1:exon

VA249_RS00885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rph
locus tag: VA249_RS00885
old locus tag: VYA_01640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013855721.1
GO function: GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease PH
translation: MRPNDRKADQVRPIKITRNYTAYAEGSVLVEFGNTKVLCNATVEESVPRWLKGQGKGWITAEYGMLPRATHSRTRREAANGKQGGRTMEIQRLIARSLRAVVDLKAMGEFMITVDCDVIQADGGTRTASISGASVAMADAFQHLIDSGKLKANPMKGHVAAVSVGLLGEDVLCDLEYVEDSAADTDMNVVMTEEGKMIEIQGTAEGEPFSHEQLMALLASAKIGITEIVAAQKAALEN
SIO_010081: VA249_RS00885
subclass of: SO_0000673
so part of: VA249_RS00885
location: 192593..193309
location: region:192593-193309:1
so has part: feature:192593-193309:1:exon

WP_128811964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192593-193309:1:exon

VA249_RS00890
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: pyrE
locus tag: VA249_RS00890
old locus tag: VYA_01650
so part of: sequence
location: 193466..194107
location: region:193466-194107:1
so has part: feature:193466-194107:1:exon
subclass of: SO_0000010

position:193466:1
position: 193466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194107:1
position: 194107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193466-194107:1:exon

VA249_RS00890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: pyrE
locus tag: VA249_RS00890
old locus tag: VYA_01650
EC number: 2.4.2.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004735727.1
GO function: GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
GO process: GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: orotate phosphoribosyltransferase
translation: MKAYQREFIEFALEKQVLKFGEFTLKSGRKSPYFFNAGLFNTGRDLARLGRFYAAALADSGIEFDVLFGPAYKGIPIATTTAVALADHHDIDTPYCFNRKEAKDHGEGGNLVGSALEGRIMLVDDVITAGTAIRESMEIIQANGADLAGVLVAIDRQEKGKGELSAIQEVERDFGCAIISIVSLTDLVTFLEEKGTDKEHLEAVKAYRAEYGI
SIO_010081: VA249_RS00890
subclass of: SO_0000673
so part of: VA249_RS00890
location: 193466..194107
location: region:193466-194107:1
so has part: feature:193466-194107:1:exon

WP_128811962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193466-194107:1:exon

VA249_RS00895
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00895
old locus tag: VYA_01660
so part of: sequence
location: complement(194577..195527)
location: region:194577-195527:-1
so has part: feature:194577-195527:-1:exon
subclass of: SO_0000010

position:194577:-1
position: 194577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195527:-1
position: 195527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194577-195527:-1:exon

VA249_RS00895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00895
old locus tag: VYA_01660
EC number: 2.3.1.241
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009698956.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Kdo(2)-lipid IV(A) acyltransferase
translation: MSKEKYTQPEFSLSLLHPRNWGVWLGFGLLAIVVNILPYRLLLPLGRTIGHFGMRYGKKRVHIATRNLELAFPEKTQEEIQHIVEENFKNTGMALIETGITWFWPTWRFKNLIVEKDLAALREKAAEGKGVLLCCVHALNLEITARAFAVLGVAGYGAFRPHNNPAYNFIQYWGRTHNGNKLIDRKDVKQMIRVLRSGERLFYLPDHDYGRNKSVFVPFFAIEDACTTTGTSILAYTSKCAIIPGSGFRNKDGKYEIIADKCIEADYPKKDEVAAAAYMNTFVEEVILRAPEQWMWLHKRYKTMADKNAPKGIRYK
SIO_010081: VA249_RS00895
subclass of: SO_0000673
so part of: VA249_RS00895
location: complement(194577..195527)
location: region:194577-195527:-1
so has part: feature:194577-195527:-1:exon

WP_221068503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194577-195527:-1:exon

VA249_RS00900
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: slmA
locus tag: VA249_RS00900
old locus tag: VYA_01670
so part of: sequence
location: complement(195533..196123)
location: region:195533-196123:-1
so has part: feature:195533-196123:-1:exon
subclass of: SO_0000010

position:195533:-1
position: 195533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196123:-1
position: 196123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195533-196123:-1:exon

VA249_RS00900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: slmA
locus tag: VA249_RS00900
old locus tag: VYA_01670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017097392.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0010974 - negative regulation of division septum assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoid occlusion factor SlmA
translation: MAGSKKSNRREEILQALAQMLESTEGASRITTAKLAKQVGVSEAALYRHFPSKARMFEGLIEFIEEALMTRINRILDDEKDTLERIRMVMHLILAFSERNPGLTRILSGHALMFENERLRERINQLFERIETQLRQILRERKIREGKSFPVEERILAAQILGQVEGSLNRFVRSDFKYQPTANFDEYWALLSAQIK
SIO_010081: VA249_RS00900
subclass of: SO_0000673
so part of: VA249_RS00900
location: complement(195533..196123)
location: region:195533-196123:-1
so has part: feature:195533-196123:-1:exon

WP_043046348.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195533-196123:-1:exon

VA249_RS00905
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: coaBC
locus tag: VA249_RS00905
old locus tag: VYA_01680
so part of: sequence
location: complement(196283..197500)
location: region:196283-197500:-1
so has part: feature:196283-197500:-1:exon
subclass of: SO_0000010

position:196283:-1
position: 196283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197500:-1
position: 197500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196283-197500:-1:exon

VA249_RS00905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: coaBC
locus tag: VA249_RS00905
old locus tag: VYA_01680
EC number: 4.1.1.36
EC number: 6.3.2.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009707942.1
GO function: GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO process: GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
translation: MQTLAGKKILLGISGGIAAYKCAELTRRLIERGAQVQVVMTKAAKEFITPLTMQAVSGRPVSDSLLDPAAEASMGHIELAKWADLVLLAPATADLIARMSAGMGNDLLTTLVLATDSPVAVSPAMNQQMYRNVATQENIATLARRGMHIWGPAAGEQACGDIGPGRMLEPMQLVNLCEQFFQPKVLSGQSILITAGPTREAIDPVRYITNHSSGKMGYALANAAAQMGANVTLISGPVNLNAPAGVKRINVDSAQEMHDAVIAHAASHDAFISCAAVADYRPEEIASQKLKKTASNDHMTIKMVKNPDIVATVAAMTKQRLFTVGFAAETNDVETYARGKLVRKNLDMICANDVSVEGQGFNCSDNAITLFWPQGELALPLASKEALSISILEKMHELMSLPPEA
SIO_010081: VA249_RS00905
subclass of: SO_0000673
so part of: VA249_RS00905
location: complement(196283..197500)
location: region:196283-197500:-1
so has part: feature:196283-197500:-1:exon

WP_221068504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196283-197500:-1:exon

VA249_RS00910
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: radC
locus tag: VA249_RS00910
old locus tag: VYA_01690
so part of: sequence
location: 197812..198486
location: region:197812-198486:1
so has part: feature:197812-198486:1:exon
subclass of: SO_0000010

position:197812:1
position: 197812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198486:1
position: 198486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197812-198486:1:exon

VA249_RS00910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: radC
locus tag: VA249_RS00910
old locus tag: VYA_01690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013855726.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA repair protein RadC
translation: MTLKSFPVDSMPREKLLARGPQALSDAELLAIFLRTGTHGMNVIELADFLIQDFGTLRQLFSATEKEFCQHKGLGQAKYVQLQAVLEMTQRYLAETLKRGDALTNPVQTKLYLSSILRDRHREAFYVLFLDNQHRVINDEILFEGTLDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADRRITRRLIDALALVDIRILDHFVIGDGESVSFAERGWI
SIO_010081: VA249_RS00910
subclass of: SO_0000673
so part of: VA249_RS00910
location: 197812..198486
location: region:197812-198486:1
so has part: feature:197812-198486:1:exon

WP_211916520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197812-198486:1:exon

VA249_RS00915
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rpmB
locus tag: VA249_RS00915
old locus tag: VYA_01700
so part of: sequence
location: 198789..199025
location: region:198789-199025:1
so has part: feature:198789-199025:1:exon
subclass of: SO_0000010

position:198789:1
position: 198789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199025:1
position: 199025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198789-199025:1:exon

VA249_RS00915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rpmB
locus tag: VA249_RS00915
old locus tag: VYA_01700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006881432.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L28
translation: MSRVCQVTGKRPVTGNNRSHARNATKRRFLPNLQTHRFWVESEKRFVKLRLTAKGMRIIDKKGIDTVLADIRARGENV
SIO_010081: VA249_RS00915
subclass of: SO_0000673
so part of: VA249_RS00915
location: 198789..199025
location: region:198789-199025:1
so has part: feature:198789-199025:1:exon

WP_005467944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198789-199025:1:exon

VA249_RS00920
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rpmG
locus tag: VA249_RS00920
old locus tag: VYA_01710
so part of: sequence
location: 199039..199209
location: region:199039-199209:1
so has part: feature:199039-199209:1:exon
subclass of: SO_0000010

position:199039:1
position: 199039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199209:1
position: 199209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199039-199209:1:exon

VA249_RS00920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rpmG
locus tag: VA249_RS00920
old locus tag: VYA_01710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013343654.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L33
translation: MAKKGVREKIRLVSSAGTGHFYTTDKNKRNMPGKFEIKKFDPVVRQHVMYKEAKIK
SIO_010081: VA249_RS00920
subclass of: SO_0000673
so part of: VA249_RS00920
location: 199039..199209
location: region:199039-199209:1
so has part: feature:199039-199209:1:exon

WP_004410866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199039-199209:1:exon

VA249_RS00925
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00925
old locus tag: VYA_01720
so part of: sequence
location: 199472..199948
location: region:199472-199948:1
so has part: feature:199472-199948:1:exon
subclass of: SO_0000010

position:199472:1
position: 199472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199948:1
position: 199948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199472-199948:1:exon

VA249_RS00925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00925
old locus tag: VYA_01720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010445097.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRVSPARRRRWNNILILSIIAFMVILNAPTWIKTYLIDEPMDPYPSLLRTDHVVKAIYFSGWDLEKQNGDWQSNLKATIPAQAIIERWQALKGTELSQDQYEQLKPRLSAPESIEIWYQDLEEPQRITFYRLDDFWVFSNWQGKWIAISVDDNYLMPK
SIO_010081: VA249_RS00925
subclass of: SO_0000673
so part of: VA249_RS00925
location: 199472..199948
location: region:199472-199948:1
so has part: feature:199472-199948:1:exon

WP_221068505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199472-199948:1:exon

VA249_RS00930
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: mutM
locus tag: VA249_RS00930
old locus tag: VYA_01730
so part of: sequence
location: 200073..200882
location: region:200073-200882:1
so has part: feature:200073-200882:1:exon
subclass of: SO_0000010

position:200073:1
position: 200073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200882:1
position: 200882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200073-200882:1:exon

VA249_RS00930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: mutM
locus tag: VA249_RS00930
old locus tag: VYA_01730
EC number: 3.2.2.23
EC number: 4.2.99.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005535594.1
GO function: GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0019104 - DNA N-glycosylase activity [Evidence IEA]; GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0006284 - base-excision repair [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
translation: MPELPEVEVSRMGISPHLIGQTIKAFVFRTPKLRWDIPQELKQLEGQVVRNISRRAKYLLIETDKGTAIVHLGMSGSLRILDAEFPAAKHDHVDLKLTNGKVLRYNDPRRFGAWLWCAPNESHEVLEHMGPEPLTEEFNADYVVEKAKGKRVAIKQFIMDNKVVVGVGNIYANESLFKSRIHPTRPAGKLSIKEWQLLVENIKATLEIAIQQGGTTLKDFSQADGKPGYFAQELQVYGKAGEPCPECGTIIETLKIGQRNTFLCPLCQH
SIO_010081: VA249_RS00930
subclass of: SO_0000673
so part of: VA249_RS00930
location: 200073..200882
location: region:200073-200882:1
so has part: feature:200073-200882:1:exon

WP_221068506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200073-200882:1:exon

VA249_RS00935
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00935
old locus tag: VYA_01740
so part of: sequence
location: 200905..201657
location: region:200905-201657:1
so has part: feature:200905-201657:1:exon
subclass of: SO_0000010

position:200905:1
position: 200905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201657:1
position: 201657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200905-201657:1:exon

VA249_RS00935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00935
old locus tag: VYA_01740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005535595.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 25 protein
translation: MTSFLDHVFVIHVSEGYEERRQHIDKHLPERGIVHFEYMLRGDIKDLTPEVKTKYFKGNDNLPELSCAYKHILVYEEIVKRNIEVALVLEDDAFLASDAVDKLKLVECEMRDEVNFIVNIEHSNRSVPLKIKEKGKLCYLASHTKRTGGYIIHLDVARKFVQFFEENRTGMPSDVFQTQMRDVLEYNTFWMDPPVVYQGSKNGTFDSDLSSRKQSAFTSITSFFRDSYQRYVVTNLSKKRLASFENVKKH
SIO_010081: VA249_RS00935
subclass of: SO_0000673
so part of: VA249_RS00935
location: 200905..201657
location: region:200905-201657:1
so has part: feature:200905-201657:1:exon

WP_099079210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200905-201657:1:exon

VA249_RS00940
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: coaD
locus tag: VA249_RS00940
old locus tag: VYA_01750
so part of: sequence
location: 201667..202149
location: region:201667-202149:1
so has part: feature:201667-202149:1:exon
subclass of: SO_0000010

position:201667:1
position: 201667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202149:1
position: 202149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201667-202149:1:exon

VA249_RS00940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: coaD
locus tag: VA249_RS00940
old locus tag: VYA_01750
EC number: 2.7.7.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017817198.1
GO function: GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
GO process: GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pantetheine-phosphate adenylyltransferase
translation: MKVIYPGTFDPVTNGHLNLIERTHEMFDEVVIGVAASPSKNTMFTLEERVALMEEVVAHLPGVTVKGFSGLLVDFARAEKANVLIRGLRTTVDFEYEFGLTNMYRKLLPGLESVFLTPEEEFAFLSSTIVREVAIHGGDIKQFVPDAVANAIEIKVNERQ
SIO_010081: VA249_RS00940
subclass of: SO_0000673
so part of: VA249_RS00940
location: 201667..202149
location: region:201667-202149:1
so has part: feature:201667-202149:1:exon

WP_221068507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201667-202149:1:exon

VA249_RS00945
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00945
old locus tag: VYA_01760
so part of: sequence
location: 202136..203077
location: region:202136-203077:1
so has part: feature:202136-203077:1:exon
subclass of: SO_0000010

position:202136:1
position: 202136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203077:1
position: 203077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202136-203077:1:exon

VA249_RS00945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00945
old locus tag: VYA_01760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005462500.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyl transferase family 90
translation: MKDSKFPYYFSNASSLLIPRFIYRAQAKRLLSTLTESERANCLDRVNYYNKCTAPFQVDSNEQSYATISGFKKTKGWTYFFDIRQVMRYFPSRFAFNYINGDVTHIPNVPSFIKSRPIAGQNQNSVVLKLNQIRHFKFIDDPVRYQDKKDMVVWRGVGFQPHRTKVIHAFYDHPQCNIGQTRPVEGQPWEKGFMSIEEQLQYKFLLCIEGNDVATNLKWAMSSNSLVIMSKPKYETWFMEGKLQAGVHYVEVNDDYSDLPEKMNYYLENEAEALAIIRNAHQWVEQFKNDKRERLISLMVADKYFTLSNQCEK
SIO_010081: VA249_RS00945
subclass of: SO_0000673
so part of: VA249_RS00945
location: 202136..203077
location: region:202136-203077:1
so has part: feature:202136-203077:1:exon

WP_221068508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202136-203077:1:exon

VA249_RS00950
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00950
old locus tag: VYA_01770
so part of: sequence
location: complement(203155..203922)
location: region:203155-203922:-1
so has part: feature:203155-203922:-1:exon
subclass of: SO_0000010

position:203155:-1
position: 203155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203922:-1
position: 203922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203155-203922:-1:exon

VA249_RS00950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00950
old locus tag: VYA_01770
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017026671.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
translation: MSKPTLAVALIVKNEEKHLKACLDTVKDWVDEIVILDSGSTDRTEEIARQYTDKFYTNLNWPGFGKQRQLAQNYVASDFVLWLDADEQVTPELKESILKAISEDAPNTLYKVNRLSAAFGKFIYHSGWSPDWIVRLYRTRYTQYNDALVHEKVEDKGFETKKLDGRLHHHTYENLHHCVEKNTKYAKAWADQREGKKSVNMADVIIHSLGAFLRVYIFKKGFLDGKYGLILAGLSSYYTFIKYADLYIRNSTKIK
SIO_010081: VA249_RS00950
subclass of: SO_0000673
so part of: VA249_RS00950
location: complement(203155..203922)
location: region:203155-203922:-1
so has part: feature:203155-203922:-1:exon

WP_221068509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203155-203922:-1:exon

VA249_RS00955
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00955
old locus tag: VYA_01780
so part of: sequence
location: complement(203960..205015)
location: region:203960-205015:-1
so has part: feature:203960-205015:-1:exon
subclass of: SO_0000010

position:203960:-1
position: 203960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205015:-1
position: 205015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203960-205015:-1:exon

VA249_RS00955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00955
old locus tag: VYA_01780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017189984.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 9 protein
translation: MLTSSPSSLCILRLSAIGDVCNTIATVQAIQKQWPEAHITWITGKLEAQLLKAIDGVEVIVFDKKAGLNGYKALWKQLKGREFDALLHMQYAIRASLATLGIKAKYKLGFSSDRSQDFQTLFTNVKVPSPTSLHVADGLMAFAHQIGVPKSELTWSLSYSEQDKTWATQEIDTNKPNLLIVPGASKAYKNWNADGYVDAINHAREKGWNVILAGSPAKVEVDLADDIQSKLSKPCLNLVGKSSILQMLALIDEVEMVIAPDTGPAHMASAMNTPIIGLYAHHNPVRVGPYHYLKYAVSVYEEAIFAETGKTSQELNWRTRAKDEKAMDRISSESVISMFDRVVEDLYPQYQ
SIO_010081: VA249_RS00955
subclass of: SO_0000673
so part of: VA249_RS00955
location: complement(203960..205015)
location: region:203960-205015:-1
so has part: feature:203960-205015:-1:exon

WP_221068510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203960-205015:-1:exon

VA249_RS00960
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00960
old locus tag: VYA_01790
so part of: sequence
location: 205121..205528
location: region:205121-205528:1
so has part: feature:205121-205528:1:exon
subclass of: SO_0000010

position:205121:1
position: 205121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205528:1
position: 205528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205121-205528:1:exon

VA249_RS00960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00960
old locus tag: VYA_01790
EC number: 2.7.1.107
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009707933.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diacylglycerol kinase
translation: MSKTQSHHSQTSGKPGNTGLTRIIKATGYSWKGLKAAFKHEAAIRQELVLLAIAIGLVCFFDVTIVERILMLGAVVLVLIVELINSAIEAVVDRISTEHHELSGRAKDIGSAAVMVALGFAAFTWLYILGGVYLR
SIO_010081: VA249_RS00960
subclass of: SO_0000673
so part of: VA249_RS00960
location: 205121..205528
location: region:205121-205528:1
so has part: feature:205121-205528:1:exon

WP_221068511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205121-205528:1:exon

VA249_RS00965
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00965
old locus tag: VYA_01800
so part of: sequence
location: 205550..206281
location: region:205550-206281:1
so has part: feature:205550-206281:1:exon
subclass of: SO_0000010

position:205550:1
position: 205550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206281:1
position: 206281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205550-206281:1:exon

VA249_RS00965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00965
old locus tag: VYA_01800
EC number: 2.7.1.166
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005384791.1
GO function: GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-deoxy-D-manno-octulosonic acid kinase
translation: MIKIYQADNSVIWFDDELISDPTLAIFDANYWQSQNRVVGSAKGRGTTWFVQLESMQVESMQIDGMQAALRHYRRGGLFGKLVNDHYWFAGWEQTRSAQEFRLLQRLIDAGVNVPRPIAARAVKSGLTYQADLLSERIPNARDLVSILQEKPLPSAMYQKIGQEIAKMHQANVNHTDLNIHNILIDAQGKVWIIDFDKCRQETSGDWKKHNLDRLERSFLKELQKRKIHWCEKDFVSLKGAYE
SIO_010081: VA249_RS00965
subclass of: SO_0000673
so part of: VA249_RS00965
location: 205550..206281
location: region:205550-206281:1
so has part: feature:205550-206281:1:exon

WP_221068512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205550-206281:1:exon

VA249_RS00970
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rfbB
locus tag: VA249_RS00970
old locus tag: VYA_01810
so part of: sequence
location: 206454..207518
location: region:206454-207518:1
so has part: feature:206454-207518:1:exon
subclass of: SO_0000010

position:206454:1
position: 206454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207518:1
position: 207518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206454-207518:1:exon

VA249_RS00970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rfbB
locus tag: VA249_RS00970
old locus tag: VYA_01810
EC number: 4.2.1.46
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017820714.1
GO function: GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTDP-glucose 4,6-dehydratase
translation: MKILVTGGAGFIGSAVIRHIIRDTQDTVINLDKLTYAGNLESLIEVSSNSRYRFEHVDICDRNELDRVFAEHKPDAVMHLAAESHVDRSIDGPAAFIETNVMGTYHLLEAARQYWLTLDEVGKSAFRFHHISTDEVYGDLEGTDDLFTETTSYAPSSPYSASKASSDHLVRAWLRTYGLPTVVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYKVATEGEIGETYNIGGHNEKANIEVVKTICSLLEEFRPNKPAGVNSYESLITYVKDRPGHDVRYAIDATKIAQELNWTPEETFESGIRKTVEWYLNNQQWWQRVLDGSYSLERLGADE
SIO_010081: VA249_RS00970
subclass of: SO_0000673
so part of: VA249_RS00970
location: 206454..207518
location: region:206454-207518:1
so has part: feature:206454-207518:1:exon

WP_221068513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206454-207518:1:exon

VA249_RS00975
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rfbA
locus tag: VA249_RS00975
old locus tag: VYA_01820
so part of: sequence
location: 207518..208384
location: region:207518-208384:1
so has part: feature:207518-208384:1:exon
subclass of: SO_0000010

position:208384:1
position: 208384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207518-208384:1:exon

VA249_RS00975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rfbA
locus tag: VA249_RS00975
old locus tag: VYA_01820
EC number: 2.7.7.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005428136.1
GO function: GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucose-1-phosphate thymidylyltransferase RfbA
translation: MKGIILAGGSGTRLYPITRGVSKQLLPVYDKPMIYYPLSVLMLAGIREILIITTPEDQDSFQRLLGDGSDFGIELEYAIQPSPDGLAQAFIIGEEFIGDDSVCLVLGDNIFYGQGFTPILQQAANMNQGATVFGYQVKDPERFGVVEFDADMHAISIEEKPTVPKSNYAVTGLYFYDNQVVKLAKQVQPSERGELEISSLNQMYLEKGNLNVQLLGRGFAWLDTGTHESLHEASSFVQTIENVQGLKVACLEEIAWRNGWLTNEQLKNAGLALAKNEYGRYLLELVEE
SIO_010081: VA249_RS00975
subclass of: SO_0000673
so part of: VA249_RS00975
location: 207518..208384
location: region:207518-208384:1
so has part: feature:207518-208384:1:exon

WP_221068514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207518-208384:1:exon

VA249_RS00980
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00980
old locus tag: VYA_01830
so part of: sequence
location: 208385..208780
location: region:208385-208780:1
so has part: feature:208385-208780:1:exon
subclass of: SO_0000010

position:208385:1
position: 208385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208780:1
position: 208780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208385-208780:1:exon

VA249_RS00980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00980
old locus tag: VYA_01830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005489486.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FdtA/QdtA family cupin domain-containing protein
translation: MSLIQWIDFKEIGDHRGNLVALEGNRNIPFDIKRVYYLYGLQPDLPRGFHAHRDLVQVAVCINGQCDILMDDGQLKQTVTLDSPTKGLVINIMQWHEMSNFSEDCVLMVLASDAYDESDYIRDYGEFLSCI
SIO_010081: VA249_RS00980
subclass of: SO_0000673
so part of: VA249_RS00980
location: 208385..208780
location: region:208385-208780:1
so has part: feature:208385-208780:1:exon

WP_221068515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208385-208780:1:exon

VA249_RS00985
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00985
old locus tag: VYA_01840
so part of: sequence
location: 208771..209313
location: region:208771-209313:1
so has part: feature:208771-209313:1:exon
subclass of: SO_0000010

position:208771:1
position: 208771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209313:1
position: 209313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208771-209313:1:exon

VA249_RS00985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00985
old locus tag: VYA_01840
inference: COORDINATES: protein motif:HMM:NF024698.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MYLSHESLTTLPFPNTRLELARPNDAAFINALRANVTLNAYVSHVENDVDAQKEWLLKYLEREQKGQEYYFIIRNNNDALGTVRLYDFDENIFRWGSWMILPNAPIKTALESMLNLYYLAFDVLNFEITHIDVRNDNKKVLSIHKKMGCKVIEVSEFDTVLELSVTDYNKCKEKFYRILR
SIO_010081: VA249_RS00985
subclass of: SO_0000673
so part of: VA249_RS00985
location: 208771..209313
location: region:208771-209313:1
so has part: feature:208771-209313:1:exon

WP_221068516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208771-209313:1:exon

VA249_RS00990
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00990
old locus tag: VYA_01850
so part of: sequence
location: 209322..209609
location: region:209322-209609:1
so has part: feature:209322-209609:1:exon
subclass of: SO_0000010

position:209322:1
position: 209322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209609:1
position: 209609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209322-209609:1:exon

VA249_RS00990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00990
old locus tag: VYA_01850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017449092.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKYIELVLSTLHEMGEDEDNEALVEAHEKTKLFGASGVLDSVGIVFLITELEEKISDDFDVDVTLADEKAMSQVTSPFRNVETLAKYIAQLVEE
SIO_010081: VA249_RS00990
subclass of: SO_0000673
so part of: VA249_RS00990
location: 209322..209609
location: region:209322-209609:1
so has part: feature:209322-209609:1:exon

WP_128811926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209322-209609:1:exon

VA249_RS00995
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS00995
old locus tag: VYA_01860
so part of: sequence
location: 209620..210321
location: region:209620-210321:1
so has part: feature:209620-210321:1:exon
subclass of: SO_0000010

position:209620:1
position: 209620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210321:1
position: 210321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209620-210321:1:exon

VA249_RS00995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS00995
old locus tag: VYA_01860
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017449093.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MPLNIVITGSRKGLGKALAEHYLAQGHTVIGCSRQESSVEHERYHHFELDVTDEKAVVSMVRSVRKQFRTVDVLVNNAGMAAMNHFLTTPLSSAEKVMATNVFGTFLFSREIAKLMMKQKSGSIVNYSTVAVPLDLEGEAIYAASKAAVESLTKISAKELSPYGIRVNAVGPTPVPTDLIKAVPKKKIEELIESQAIKRLGKEDDVINVVDFFISPRSEFITGQVIYLGGVFK
SIO_010081: VA249_RS00995
subclass of: SO_0000673
so part of: VA249_RS00995
location: 209620..210321
location: region:209620-210321:1
so has part: feature:209620-210321:1:exon

WP_211915554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209620-210321:1:exon

VA249_RS01000
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01000
old locus tag: VYA_01870
so part of: sequence
location: 210321..211670
location: region:210321-211670:1
so has part: feature:210321-211670:1:exon
subclass of: SO_0000010

position:211670:1
position: 211670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210321-211670:1:exon

VA249_RS01000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01000
old locus tag: VYA_01870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017449094.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fatty acid--CoA ligase family protein
translation: MEYLDKLSGYSDEVALSFNSEQHSYSDLNQNIKRFGDDLKQITQSQVVCIVSDYSFDAISLFFALVKKKCIIVPIVSENQEEVDKRIAVIKPDVVINLRKSTGIAFEQFEQDTANRHQLILDLILREQSGLVLFSSGSTGEPKAMIHNLDVLLATYVDKRPKSLSIMVFLMFDHIGGLNTLLNSLSMGAKIVIPEKREPEHVAMLIEREKVNLLPASPTFLNMMLIANVHQHYDLKSLRMVTYGTEAMPESLLLRLKATLPRVKLLQTFGTSETGIAQTSSRSSSSLEIKFDDPNQEYKIVNNELWLRSKTQIMGYLNHDMSSFSEDGWFQTGDLVEQSEDGYLKIIGRAKEVINVGGEKVLPSEVESVLLGIDGIEDCVVYAAANAITGQTVVANVTPSAGTDLKELKKQIRKCCRAQLDIYKVPTKINFTDDAGVGERFKKIRVNIK
SIO_010081: VA249_RS01000
subclass of: SO_0000673
so part of: VA249_RS01000
location: 210321..211670
location: region:210321-211670:1
so has part: feature:210321-211670:1:exon

WP_225927093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210321-211670:1:exon

VA249_RS01005
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01005
old locus tag: VYA_01880
so part of: sequence
location: 211667..212764
location: region:211667-212764:1
so has part: feature:211667-212764:1:exon
subclass of: SO_0000010

position:211667:1
position: 211667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212764:1
position: 212764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211667-212764:1:exon

VA249_RS01005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01005
old locus tag: VYA_01880
EC number: 2.6.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017085927.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DegT/DnrJ/EryC1/StrS family aminotransferase
translation: MIKFLDLKAINAAYENELKEACARVIDSGWYIMGNELEQFESKFADYCGTKYAVGVANGLDALILVLRAWKELGKLSEGDEVIVPANTYIASILAITENKLVPVLVEPDIETYNLTKEGIEAAITPRTKAVLPVHLYGLISPMSEIMQIAKEYNLLVLEDCAQAHGAMTGGKKAGNWGDAAGFSFYPGKNLGALGDAGAITTNDDTLYQALVALRNYGSHKKYENKYQGVNSRLDEIQAAMLSVKLNYLDSETEHRRKLSSVYLEGISNPKITLPKCFNSDAHVWHLFVVRCKNRLDFSEYLVKQGVQTLVHYPTPPHKQEAYESYTDLNLPITETIHREVISLPMGPTLSLEDAKKIVEIINCY
SIO_010081: VA249_RS01005
subclass of: SO_0000673
so part of: VA249_RS01005
location: 211667..212764
location: region:211667-212764:1
so has part: feature:211667-212764:1:exon

WP_221068517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211667-212764:1:exon

VA249_RS01010
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01010
old locus tag: VYA_01890
so part of: sequence
location: 212773..213714
location: region:212773-213714:1
so has part: feature:212773-213714:1:exon
subclass of: SO_0000010

position:212773:1
position: 212773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213714:1
position: 213714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212773-213714:1:exon

VA249_RS01010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01010
old locus tag: VYA_01890
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF012745.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MRDVIDDLVVAIFTYQQEEYIKDAIISIYNQTVWPSKLIIFDDCSKDKTVNFINEVVEKKPDGLNVEVVLNDSNIGLSSQFNKLKDEFNNTLIIIQAGDDISKSERLEKQYSIWKNDSDVKLVLSQFNKINYCGDIVSGRDESEIFDFNLNSIIERNILPAGCTAAIDSSLFNDFPPLDKKVINEDRVFIFRAYLKGKAVKVMQPLIDYRYDVGISALSQNTRDEFINKWQKMYSRELVDLSMNINDAKHINRYDVLDILDERKAFIKLLNDVFFGFYNSKFNVWKAFLLKKVNFKRVFKVNRRVNKYFKNTR
SIO_010081: VA249_RS01010
subclass of: SO_0000673
so part of: VA249_RS01010
location: 212773..213714
location: region:212773-213714:1
so has part: feature:212773-213714:1:exon

WP_221068518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212773-213714:1:exon

VA249_RS01020
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01020
old locus tag: VYA_01900
so part of: sequence
location: complement(214372..215466)
location: region:214372-215466:-1
so has part: feature:214372-215466:-1:exon
subclass of: SO_0000010

position:214372:-1
position: 214372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215466:-1
position: 215466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214372-215466:-1:exon

VA249_RS01020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01020
old locus tag: VYA_01900
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF024831.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MKKTIISIMPHLRGGGVEKVVSLLSQGLSQFSDCDVHIITIKPFDELIPLPEEVTVHRLDTDLRNFLNVKISNKSKAKIIYKYITDNITSSEPDLILCHQETVSKIMVHCKYKNMYHVIHSNLSNDRLSHSKGITRQLRKRKLQKLYQNIPVICVSKGVEEDLKSTFKLKNTRVIYNAIQPEKIKTLASENTQLPQKPYFIHVGNFTRAKRQDRLVRAYLESGIEDVDLVLLGEHTDITNEVKSMLSEYGNHAERVHMPGFKSNPYPWIAASRGFILSSDYEGLPTVLLESITLGTPTISTNCKSGPNEIFGENNKHCLCELNVDNLKDKIIETYTHPQKFIIPLRTEFSLESMCRTYYNLIKA
SIO_010081: VA249_RS01020
subclass of: SO_0000673
so part of: VA249_RS01020
location: complement(214372..215466)
location: region:214372-215466:-1
so has part: feature:214372-215466:-1:exon

WP_221068519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214372-215466:-1:exon

VA249_RS01025
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01025
old locus tag: VYA_01910
so part of: sequence
location: complement(215500..216234)
location: region:215500-216234:-1
so has part: feature:215500-216234:-1:exon
subclass of: SO_0000010

position:215500:-1
position: 215500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216234:-1
position: 216234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215500-216234:-1:exon

VA249_RS01025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01025
old locus tag: VYA_01910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009843915.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 25 protein
translation: MPIKIFVINLKESTERREQMSSILSSVNFEFFDAENVKSDPQHSIYRLYDADKCQKYKGYQLTAPELGCWASHIALWRHCVKIQESILILEDNIELFGDLNAQLDNIQSFVNKYGLLKLGNIFERQHLKIQSIDENYEIISNLKGACGTSAYAITPEVAVQYLSQIDGFFEPVDDFMDNEWRTKQTIYSYHPQLVSRSNATSTIGKRKEKNNLTLVNKLSVEWYRLLKQWKQKNYNHNYKKACN
SIO_010081: VA249_RS01025
subclass of: SO_0000673
so part of: VA249_RS01025
location: complement(215500..216234)
location: region:215500-216234:-1
so has part: feature:215500-216234:-1:exon

WP_225927094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215500-216234:-1:exon

VA249_RS01030
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: waaA
locus tag: VA249_RS01030
old locus tag: VYA_01920
so part of: sequence
location: complement(216236..217507)
location: region:216236-217507:-1
so has part: feature:216236-217507:-1:exon
subclass of: SO_0000010

position:216236:-1
position: 216236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217507:-1
position: 217507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216236-217507:-1:exon

VA249_RS01030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: waaA
locus tag: VA249_RS01030
old locus tag: VYA_01920
EC number: 2.4.99.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005384795.1
GO function: GO:0016740 - transferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
translation: MLIRIIYTLLLALASPILLFGLYKSKPNKPKFGKRWKEHFGFTPKLKATERPIWIHAVSVGESIAAIPLIKALKEKRPDQPILVTTTTSTGAEQIAKLGDLVEHRYMPIDFAFAVKGFLKAIQPKQMLIIETELWPNTLNVVHNAEVPITVVNARLSEKSCKNYAKVQPLFNLFIPCLDKVLCQTESDAERFERLGVGKEKLEVTGSIKFDIQISQDVKDKGKALRAELGHDRPVWIAASTHKGEDEQVLEAHRQVLESHPDALLVLVPRHPERFDNVFELCQKQGFNTVRRTNQTEVTESTQVYLGDTMGEMLNLIGAADVCFMGGSLAGDKVGGHNVLEPAALGVPVITGPSYYNFKEIVEMMQVKSLISIVNNTDQLAQSITVLFEDRSLRNTLQNDMTQFYDINSGTIAKTLNAVKEIY
SIO_010081: VA249_RS01030
subclass of: SO_0000673
so part of: VA249_RS01030
location: complement(216236..217507)
location: region:216236-217507:-1
so has part: feature:216236-217507:-1:exon

WP_221068520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216236-217507:-1:exon

VA249_RS01035
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: waaF
locus tag: VA249_RS01035
old locus tag: VYA_01930
so part of: sequence
location: complement(217501..218559)
location: region:217501-218559:-1
so has part: feature:217501-218559:-1:exon
subclass of: SO_0000010

position:217501:-1
position: 217501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218559:-1
position: 218559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217501-218559:-1:exon

VA249_RS01035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: waaF
locus tag: VA249_RS01035
old locus tag: VYA_01930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009707927.1
GO function: GO:0008920 - lipopolysaccharide heptosyltransferase activity [Evidence IEA]
GO process: GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipopolysaccharide heptosyltransferase II
translation: MKKILIIGPSWVGDMVMSQSLYIVLKQLHPESQIDVIAPGWCKPILERMPEIHQAIEMPIGHGEFNLWGRREIGKSLREKQYDHAYILPKSAKSALIPWFANIPLRTGWKGEMRYGLLNDLRPNMKSFQFMVERYVALAYSQAKMIDSSSLGGLETLPRPSLFIDKQEQSATISKFNLNQESPVVGLCPGAEFGPAKKWPEAHYAEVAIQMAKSGHQVWLFGSQKDLDTCNNIKQLVPAELQQRIHVLAGQTSLIEAVDLLAACQTVVANDSGLMHVAAAVGCNVVAVYGSTSPKYTPPLAVKVEIVHTDIDCRPCFKRECQFKHLKCLTELSPKQVLNSIQKLEAITVSPC
SIO_010081: VA249_RS01035
subclass of: SO_0000673
so part of: VA249_RS01035
location: complement(217501..218559)
location: region:217501-218559:-1
so has part: feature:217501-218559:-1:exon

WP_221068521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217501-218559:-1:exon

VA249_RS01040
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
alternative label: msbB
gene: lpxM
locus tag: VA249_RS01040
old locus tag: VYA_01940
gene synonym: msbB
so part of: sequence
location: complement(218556..219545)
location: region:218556-219545:-1
so has part: feature:218556-219545:-1:exon
subclass of: SO_0000010

position:218556:-1
position: 218556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219545:-1
position: 219545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218556-219545:-1:exon

VA249_RS01040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
alternative label: msbB
gene: lpxM
locus tag: VA249_RS01040
old locus tag: VYA_01940
gene synonym: msbB
EC number: 2.3.1.243
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005428209.1
GO function: GO:0016746 - acyltransferase activity [Evidence IEA]
GO process: GO:0009245 - lipid A biosynthetic process [Evidence IEA]
note: LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase, an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase
translation: MTEQRDDFDPKAYNPEFERHFLAPKYWGTWLGVVLSLPLAILPLRAQQWLAKTIAKKLAKSRKGPAHRARVNFELCFPEKTFAERETLIEKTLYTAALFFFRFSLLSLRSPKWLQQRCQIRGLDILQQHIDNNENVILMVPHSWAIDIPAILLASMGMPVSAMAKKQKNEVADWLMHRQRVQYGGRVYERSGGIKPFLKSIRDGYIGYYLPDQDHGPEHSVFVDFFATRKATLPGLGKIAKLSRAKVLPMFASMNTEDGSFDIEILPAFELDQGEEQDARTCNQAIEYFAGNKPEQYMWVLQLLHSQEDGSNYYNLYKSKYDSDWQISK
SIO_010081: VA249_RS01040
subclass of: SO_0000673
so part of: VA249_RS01040
location: complement(218556..219545)
location: region:218556-219545:-1
so has part: feature:218556-219545:-1:exon

WP_221068522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:218556-219545:-1:exon

VA249_RS01045
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rfaD
locus tag: VA249_RS01045
old locus tag: VYA_01950
so part of: sequence
location: complement(219656..220597)
location: region:219656-220597:-1
so has part: feature:219656-220597:-1:exon
subclass of: SO_0000010

position:219656:-1
position: 219656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220597:-1
position: 220597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219656-220597:-1:exon

VA249_RS01045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rfaD
locus tag: VA249_RS01045
old locus tag: VYA_01950
EC number: 5.1.3.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005535473.1
GO function: GO:0008712 - ADP-glyceromanno-heptose 6-epimerase activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ADP-glyceromanno-heptose 6-epimerase
translation: MIIVTGGAGMIGSNIVKALNEAGINDILVVDNLKNGKKFKNLVDLDITDYMDRDDFLTQIMAGDDFGPIEAVFHEGACSATTEWDGKYMMLNNYEYSKELLHYCLDREIPFLYASSAATYGETDTFIEEREYEGALNVYGYSKQQFDNYVRRLWQDAEDHGEKVSQITGFRYFNVYGPREDHKGSMASVAFHLNNQINAGENPKLFAGSESFKRDFVYVGDVSKVNLWFLENGVSGIFNCGTGNAESFEEVAKAVITHHGKGEIQTIPFPDHLKGAYQEFTQADLTKLRAAGCDVVFKTVAEGVAEYLAIQNC
SIO_010081: VA249_RS01045
subclass of: SO_0000673
so part of: VA249_RS01045
location: complement(219656..220597)
location: region:219656-220597:-1
so has part: feature:219656-220597:-1:exon

WP_221068523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219656-220597:-1:exon

VA249_RS01050
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01050
old locus tag: VYA_01960
so part of: sequence
location: complement(221521..223719)
location: region:221521-223719:-1
so has part: feature:221521-223719:-1:exon
subclass of: SO_0000010

position:221521:-1
position: 221521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223719:-1
position: 223719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221521-223719:-1:exon

VA249_RS01050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01050
old locus tag: VYA_01960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005489436.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YjbH domain-containing protein
translation: MKLIKTSLTLSLMGPAFVWAQEMPFEAPPLQPSQMDFGGVGLMQMPTGRMAPEGEFNFALTGSDEYLFYNVTLQVMPWLETTLRYTMVNDLFYSSDPDFSGDTKYTDKGIDFKVRLLEESEYLPELSVGIRDFAGTGLFDGEFIAATKRYSNPKLGTFDFTLGMGWGYLGTRDNISNPACKVSDKYCERPSDFKGNGGSVDFERWFKGPAALFGGVEYQTLHAPLRFKLEYDSNDYSEDFPVKRGGVDMTPHTPWNVGVLYRLGHMADLRVSYERGDTLVAGVNLYTNFNDMPSFWRDTPTPELEEKQPEQLSDVDWQRVTEDLDKIAGYENTQVFANENTVSIVGEQKKYRNRNEAHEKAAAVLYNQVPESVDTFTINERTRGLIGDQTVISKDKYQAVAQVNYIEPKIEDAVSTSSNKPVGKATYDGFERFDWGFAPKLAQTLGNPEEFYLFSVGLSGSASYWLTDNLEIGGSLYWDWYNNYDKFNYVTPPDGTTIPRVRTMFRAYQNEHAVTMSNLQLTWFQEYSDTMDQQFYAGYLESMFAGIGTEFLYRPQGANWAIGADVNLISQRDPQSYFGVYDDKWQYVPEYGRPFQVVDKGFTGFVSGYYYPQWTFLSDLMVQVDVGQFLGGDVGTQVNVSKQFKSGVIAGAFASISDLSADEFGEGSFTKGFYISIPFDIMTVKPSNNRANFSWQPLTRDGGQKLGRKYSLIELTDERNPWFQRPNHSEVK
SIO_010081: VA249_RS01050
subclass of: SO_0000673
so part of: VA249_RS01050
location: complement(221521..223719)
location: region:221521-223719:-1
so has part: feature:221521-223719:-1:exon

WP_221068524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221521-223719:-1:exon

VA249_RS01055
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01055
old locus tag: VYA_01970
so part of: sequence
location: complement(223716..224516)
location: region:223716-224516:-1
so has part: feature:223716-224516:-1:exon
subclass of: SO_0000010

position:223716:-1
position: 223716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224516:-1
position: 224516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223716-224516:-1:exon

VA249_RS01055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01055
old locus tag: VYA_01970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005535467.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: capsule biosynthesis GfcC family protein
translation: MNYRRSALISSLLFAVTSLFAVTGLLSITSLAPVSAQPSVNTGPSLQIKLIGVDKQLQSDQGLRLADALKLAQQQRMVLQYPLGTTLFDESEDALQKSVALKNSVLNQMMQQNLVSHPLYKFIQKQQFAPRVLSGIDVDQVRLDKFDNPLLKGKFSLASSARDSHVVYLGNVDKVWNIRSQAGIPLHTQIDHLNTTIGDLSQSPVVIYPDGNVAHPHHGSWLNTQYYLPPLTMVYIPFAPFSESQMDQEIVTLLTQLKPMHSKTPL
SIO_010081: VA249_RS01055
subclass of: SO_0000673
so part of: VA249_RS01055
location: complement(223716..224516)
location: region:223716-224516:-1
so has part: feature:223716-224516:-1:exon

WP_221068525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:223716-224516:-1:exon

VA249_RS01060
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01060
old locus tag: VYA_01980
so part of: sequence
location: complement(224513..225187)
location: region:224513-225187:-1
so has part: feature:224513-225187:-1:exon
subclass of: SO_0000010

position:224513:-1
position: 224513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225187:-1
position: 225187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224513-225187:-1:exon

VA249_RS01060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01060
old locus tag: VYA_01980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017634966.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YjbF family lipoprotein
translation: MNHFLPRSWMRLLVALPVLSLAVGCTQKFNDVSATVQEAYNNYVDVELTAEEIDAVPYASAYLKIGNQKQVFVVLAFAEHNPITGNTQLKWVSADKAMVVTENGHIVKTIGLQHNNLAGAYGDVPSFALENTEYSRSYDWAKQYRYGFPAHVTRTYQGKEPVITPLSSTPADLYRETVHFSTLSQSVDNFYWVDVNGKVIKTVQHLGPNMMPIELTILKGYSKS
SIO_010081: VA249_RS01060
subclass of: SO_0000673
so part of: VA249_RS01060
location: complement(224513..225187)
location: region:224513-225187:-1
so has part: feature:224513-225187:-1:exon

WP_221068526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224513-225187:-1:exon

VA249_RS01065
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01065
so part of: sequence
location: complement(225259..225483)
location: region:225259-225483:-1
so has part: feature:225259-225483:-1:exon
subclass of: SO_0000010

position:225259:-1
position: 225259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225483:-1
position: 225483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225259-225483:-1:exon

VA249_RS01065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009698932.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNTALAILMALSASTAFAATEAGTTSTAAASATGTTAVAVGAAAAVTVVAVAASDSDSTSTSTSTSTSTSVTK
SIO_010081: VA249_RS01065
subclass of: SO_0000673
so part of: VA249_RS01065
location: complement(225259..225483)
location: region:225259-225483:-1
so has part: feature:225259-225483:-1:exon

WP_221068527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225259-225483:-1:exon

VA249_RS01070
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01070
old locus tag: VYA_02000
so part of: sequence
location: 226323..226853
location: region:226323-226853:1
so has part: feature:226323-226853:1:exon
subclass of: SO_0000010

position:226323:1
position: 226323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226853:1
position: 226853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226323-226853:1:exon

VA249_RS01070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01070
old locus tag: VYA_02000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017817207.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane beta-barrel protein
translation: MINKRPWLGALSAISVGLCSFSASANFYSGALVSYSNAEYHHTSSQNTQSTVSEGNPFLLQAQAGYFFNDYLALEARYGTSVQRDSGLAVDSLASGFIKLNMPVAERIALYGLAGYSSVQIDKQGVGSLKEQGFSFGLGMHYALDKHNAVVFEFIDSASEDQVRLNALTIGFQHRF
SIO_010081: VA249_RS01070
subclass of: SO_0000673
so part of: VA249_RS01070
location: 226323..226853
location: region:226323-226853:1
so has part: feature:226323-226853:1:exon

WP_221068528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226323-226853:1:exon

VA249_RS01075
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01075
old locus tag: VYA_02010
so part of: sequence
location: 226914..229562
location: region:226914-229562:1
so has part: feature:226914-229562:1:exon
subclass of: SO_0000010

position:226914:1
position: 226914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229562:1
position: 229562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226914-229562:1:exon

VA249_RS01075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01075
old locus tag: VYA_02010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005489498.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SLBB domain-containing protein
translation: MLKGTFSIAAFALASMFAPFSYAQTPTPAQIQMFKSLPADQQQALASQYGVSLPSGASQPSSFENPQVVDARPATSETEESTRGPEDDAQAQTGLKRFGLDLFAGSPSTFAPISDVPVPADYTVGPGDEIVIQLFGKENTTNRLRVSREGVINFPSLGPVQVAGMTFSEVRDSLSQRVREQMIGVRSDISLGEMRTMQIFVMGDAYKPGAYTVSALTTISQAIYYSGGFSESGALRNVQLKRNGQVIRKLDMYDLLLRGDARNDVRLLPGDVVFIGAVGNTISIDGEVNRPAIYEIKSGETYKQAFQLAGGFTANAYRDQIEVKRYAAKGGRDLVTLNFTQSHDQQIKVKDGDTVSVPTKSEELTRFVQVEGDVRHSGFLEWKPGLRIADLFQSVDTAFKSTADVNYAVVVREINAQRDIEVFQLNLAKAILAPNSEDNLQLHSRDRVLVFNRLSNKGIDSLLEVDEKAKSFEQAQQQAQEQIQQEEQDLSAATSTVTGKEARMMWQGEEVTPEQIQDLKQNTRSSLLAPVLLKLQQQSRLGLAPQIAEVTGEVKYPGRYPITPRMKVSDLLEAAGGLTYGAFTINAELARSVINNIDERASIDIERIDLRKAIQGDVNNDVIIVGRDRLNVLQKPNVKLQSTVMLQGEVRFPGSYTVRQGETMSELLERAGGLTEFAHPMGAIFTREALRLQEQKLLNQYAADMRAETAKKTFRADSNLGSVISDPDKTLAFVEEASRSKALGRMVVQLNRILKHDRSADFMLEDGDFLFVPTFRNTVSVMGEVQVPITYLLDNKLEVDDYLNKAGGAKKQADEDRIFVVRADGSVYKPTSGYWFGNNNQELQAGDTIVVPIDTDYRDALSTWTAATQILYQTGVAINALK
SIO_010081: VA249_RS01075
subclass of: SO_0000673
so part of: VA249_RS01075
location: 226914..229562
location: region:226914-229562:1
so has part: feature:226914-229562:1:exon

WP_221068529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226914-229562:1:exon

VA249_RS01080
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01080
old locus tag: VYA_02020
so part of: sequence
location: 229654..230055
location: region:229654-230055:1
so has part: feature:229654-230055:1:exon
subclass of: SO_0000010

position:229654:1
position: 229654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230055:1
position: 230055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229654-230055:1:exon

VA249_RS01080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01080
old locus tag: VYA_02020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002535590.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: four helix bundle protein
translation: MRQLDFEKLEVWKRSCRLSCDVYKELESCKNFGFKDQLTRSALSIASNIAEGEERETVNESARFLYIAKGSAGEAITQLYIGIEAGFVEKQKALALISEAKEISAMLAALIKRRKGSVREPKPKYQSYKDPRS
SIO_010081: VA249_RS01080
subclass of: SO_0000673
so part of: VA249_RS01080
location: 229654..230055
location: region:229654-230055:1
so has part: feature:229654-230055:1:exon

WP_221068530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229654-230055:1:exon

VA249_RS01085
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01085
old locus tag: VYA_02030
so part of: sequence
location: 230208..231203
location: region:230208-231203:1
so has part: feature:230208-231203:1:exon
subclass of: SO_0000010

position:230208:1
position: 230208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231203:1
position: 231203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230208-231203:1:exon

VA249_RS01085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01085
old locus tag: VYA_02030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005462489.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Wzz/FepE/Etk N-terminal domain-containing protein
translation: MEPQKEHPQHYLPYPPHSQQPADDEIDLRELFGALWKGKWIIIATTFVFAVGAVLYALSLPNIYKSDALLAPAESSGGGGLSKMAGQLGGLAALAGVNLGAGESSQTDLAVQVMKSRQFVEAFIKKHDLLVPLMAAKDWDLANNKLILDEELYNPDTGEWLREAKGLRGSTPTAQEAFEVFSKEVLSVSQDKESGLYTVSVKNYSPYIAQQWVNWLIEDINKVMRERTIAETSQNLAYLNTQLQKTAVADMQSTFYKLIEEQTKSLMLAEVQEEFIFKVVDPAVIPELKDGPKRALICVLGTLLGGMLGVAIVLVRFAFRKEDTEDLESRT
SIO_010081: VA249_RS01085
subclass of: SO_0000673
so part of: VA249_RS01085
location: 230208..231203
location: region:230208-231203:1
so has part: feature:230208-231203:1:exon

WP_221068531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230208-231203:1:exon

VA249_RS01090
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01090
old locus tag: VYA_02040
so part of: sequence
location: 231360..232400
location: region:231360-232400:1
so has part: feature:231360-232400:1:exon
subclass of: SO_0000010

position:231360:1
position: 231360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232400:1
position: 232400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231360-232400:1:exon

VA249_RS01090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01090
old locus tag: VYA_02040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019282767.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Gfo/Idh/MocA family oxidoreductase
translation: MIKDRKLRIAVVGCGRISKNHFGSIEQLKSEYELVAVCDNDPKVLDEHVSHYGVSGYLSIDELLASESLDLVTLCTPSGMHASQAIKAAKAKVHVITEKPMATKWQDGLDMVRTCDEEGVRLFVVKQNRRNSTLQLLKRAVNDKRFGQIHMVHLNVFWTRPQEYYDRASWSGTWDMDGGAFMNQATHYVDLMHWLIGPVEKVHAMTSTHRDIDVEDTGVVNIKWRNGALGSMAVTMCTYPKNLEGSITILGEKGTVRIGGVAVNDIQEWTFEDERDYDKDIHSANYQTTSVYGFGHPPYFQNVADVLRGKAEPETDGREGLKSLELLISTYRSARDGKEIGLPLNL
SIO_010081: VA249_RS01090
subclass of: SO_0000673
so part of: VA249_RS01090
location: 231360..232400
location: region:231360-232400:1
so has part: feature:231360-232400:1:exon

WP_275946575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231360-232400:1:exon

VA249_RS01095
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: tviB
locus tag: VA249_RS01095
old locus tag: VYA_02050
so part of: sequence
location: 232417..233691
location: region:232417-233691:1
so has part: feature:232417-233691:1:exon
subclass of: SO_0000010

position:232417:1
position: 232417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233691:1
position: 233691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232417-233691:1:exon

VA249_RS01095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: tviB
locus tag: VA249_RS01095
old locus tag: VYA_02050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010317126.1
GO function: GO:0051287 - NAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO process: GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB
translation: MKLDSLNIGIVGLGYVGLPLAVEFGKKYPTLGLDINAARVQELETGKDSTLECSGEELASAKYLRYTHQLEDLKHCNFYIVTVPTPITEENTPDLTPLIKASEALSQVISKGDIVVFESTVYPGATEEVCIPIIEKLSGLTFNKDFYAGYSPERINPGDKVNRLTTITKITSGSTDAVADFVDAVYASIVTAGTHKASSIKVAEAAKVIENTQRDLNIAIINEFAKIFNRLDIDTEEVLKAAGTKWNFLPFKPGLVGGHCISVDPYYLTHKAQEVGYRPEVILAGRRINDGMGEYVATQLVKKLASKKIHIDEAKVLILGFTFKGDCPDVRNTKIINIVKELQDFNMSVDVYDSWASKEEVRHEYGIELIDELKEGHYDGIVLAVDHSETKAMGVEALRRLGKDSHVLYDVKHVLSVGEADIRL
SIO_010081: VA249_RS01095
subclass of: SO_0000673
so part of: VA249_RS01095
location: 232417..233691
location: region:232417-233691:1
so has part: feature:232417-233691:1:exon

WP_221068533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232417-233691:1:exon

VA249_RS01100
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01100
old locus tag: VYA_02060
so part of: sequence
location: 233738..234319
location: region:233738-234319:1
so has part: feature:233738-234319:1:exon
subclass of: SO_0000010

position:233738:1
position: 233738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234319:1
position: 234319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233738-234319:1:exon

VA249_RS01100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01100
old locus tag: VYA_02060
EC number: 2.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017074470.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyltransferase
translation: MSFFQHETAIVDDGANIGEGSRVWHWAHVCSGAQIGRGVSLGQNAFVGNKVTIGDQCKIQNNVSVYDNVHLEEGVFCGPSMVFTNVYNPRSLIERKDQYRDTIVKKGATLGANCTVVCGITIGEYAFIGAGTVVNKDVKPFALMVGVPAKQIGWMSQYGEQLDLPLEGHLTITCPRTQTVYQLDGSILTVVEE
SIO_010081: VA249_RS01100
subclass of: SO_0000673
so part of: VA249_RS01100
location: 233738..234319
location: region:233738-234319:1
so has part: feature:233738-234319:1:exon

WP_221068534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233738-234319:1:exon

VA249_RS01105
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01105
old locus tag: VYA_02070
so part of: sequence
location: 234328..235404
location: region:234328-235404:1
so has part: feature:234328-235404:1:exon
subclass of: SO_0000010

position:234328:1
position: 234328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235404:1
position: 235404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234328-235404:1:exon

VA249_RS01105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01105
old locus tag: VYA_02070
EC number: 2.6.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004742915.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DegT/DnrJ/EryC1/StrS family aminotransferase
translation: MQFIDLAAQYQHLKTKIDARIHKVLDHGHYIMGPEVFELEEQLAEYVGVKHAITCANGTDALTLAMMVLDIKEGDAVFCPTFTFFATAETIAFANATPVFVDSEESTFNICPVDLEKRIQQVIAEGKLVPKAIVSVDLFGLPANYVEIEAIAEKYNLKLIEDAAQGFGGSLNGKMAGAFGDIATTSFFPAKPLGCYGDGGAIFTNNDDYAELLRSLRIHGKGLDKYDNVRIGVNSRLDTIQAAILLEKLAAFPQELISRQKVADQYEAELKDRFVIPQVPEGYTSSWAQYTVCCENRELEMQKYQAQGIPTMVYYRTCMHQQTAFSGLNYKNGDFPVAEKLATAVFSLPMHGYMNYKL
SIO_010081: VA249_RS01105
subclass of: SO_0000673
so part of: VA249_RS01105
location: 234328..235404
location: region:234328-235404:1
so has part: feature:234328-235404:1:exon

WP_221068535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234328-235404:1:exon

VA249_RS01110
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01110
old locus tag: VYA_02080
so part of: sequence
location: 235467..236828
location: region:235467-236828:1
so has part: feature:235467-236828:1:exon
subclass of: SO_0000010

position:235467:1
position: 235467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236828:1
position: 236828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235467-236828:1:exon

VA249_RS01110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01110
old locus tag: VYA_02080
inference: COORDINATES: protein motif:HMM:NF024832.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oligosaccharide flippase family protein
translation: MLNRVKFKLPSGSFYKNVMVLARGTTIAQALPILISPILTRIYTPEDFGVLAIYVALMSMLVIVSTGRYELAIMLPKKNTESIQLLWLAIFINFIFSLVVYVLLIFGFQDFSRYLGLPLGYDFIIYFLPVSIFIIGVCQSINGLLNRNKKYREMSFTKILNNLGGGITQISLFNYSGGLLIGYIAGQFVSLCYLVFTLKNKKNEGLKTKIKLWLPDFRIMFKLAYEYRVFPKVNAISSLLNTSSVQLIPLLLTSFFSSITTGFYSLSQRILQMPMSLLGSSIALVYFQKANEIIDNKEQIKKLTLDVNKKLLLIGLFPILITLVFGDYLFSIVFGKDWIIAGVYAQYLAPWIYLVFISSPLSHLLTVLGKQKELLLFNAFLFVTRIGWLLTAYLLGFEPGQTIFVHACIGFVAWLSFVYYVMSLAEIKPKEVSAQLFPFASLLFLCSIMGIYI
SIO_010081: VA249_RS01110
subclass of: SO_0000673
so part of: VA249_RS01110
location: 235467..236828
location: region:235467-236828:1
so has part: feature:235467-236828:1:exon

WP_221068536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235467-236828:1:exon

VA249_RS01115
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01115
old locus tag: VYA_02090
so part of: sequence
location: 236838..238355
location: region:236838-238355:1
so has part: feature:236838-238355:1:exon
subclass of: SO_0000010

position:236838:1
position: 236838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238355:1
position: 238355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236838-238355:1:exon

VA249_RS01115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01115
old locus tag: VYA_02090
inference: COORDINATES: protein motif:HMM:NF012936.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: asparagine synthase C-terminal domain-containing protein
translation: MINVKLDLNFGFEWFKNSTVALKGTVYDRQGQELTIEDIKKDVENCDSLIRIMHYIETIRGMFSLIINHDNKLYLISDNIRTFPLFYTKVGNEWHVSDKVSNLVSLSNANISESSKQAFLSTGYTLGCQTIFDEIYQVQAAEVVELNCSGIAESAEYWNYRSVDILNDDFYNLQARGIELVEQAVKRVIKSLNGRQAVIPLSGGYDSRLILTLLKHFNYTNVICFTYGSPKSKELSVATSVAEKLGFTCHVIKYTKSFVNDNLNVNSLKEYMKFAFNGTSVPHLQDYLAVSYLQSKNLIDSDGVFIPGHSGDIFSGTHIIGNVKENTERAKVELGLKHKHFRLVEYTGALDFPYYDSDNLAYSNMEAWSWKERQSKFIVNSIRTYEYFGYEARIPLWDLDLANFFRNVPLKYKNRRNLNTYSIESNLYDSICHKLFHEYGVDNFVRPTDSLVTRVVRRIVTKFTNIDGVNNLDLIILNLSKNEKLCFKSSKFNGKVAEMQLLFLD
SIO_010081: VA249_RS01115
subclass of: SO_0000673
so part of: VA249_RS01115
location: 236838..238355
location: region:236838-238355:1
so has part: feature:236838-238355:1:exon

WP_221068537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236838-238355:1:exon

VA249_RS01120
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01120
old locus tag: VYA_02100
so part of: sequence
location: 239347..239649
location: region:239347-239649:1
so has part: feature:239347-239649:1:exon
subclass of: SO_0000010

position:239347:1
position: 239347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239649:1
position: 239649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239347-239649:1:exon

VA249_RS01120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01120
old locus tag: VYA_02100
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGKSGSGANNGLIASGFAHAGIFGVLIYTIVFAFLIKLIDFLGGKVFPVWFLLAAFIVPISSAVLNSDLLTTLSTHGFGVAIFMLYLIRKEKMENYLCSK
SIO_010081: VA249_RS01120
subclass of: SO_0000673
so part of: VA249_RS01120
location: 239347..239649
location: region:239347-239649:1
so has part: feature:239347-239649:1:exon

WP_221068538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239347-239649:1:exon

VA249_RS01125
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: wecB
locus tag: VA249_RS01125
old locus tag: VYA_02110
so part of: sequence
location: 239637..240731
location: region:239637-240731:1
so has part: feature:239637-240731:1:exon
subclass of: SO_0000010

position:239637:1
position: 239637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240731:1
position: 240731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239637-240731:1:exon

VA249_RS01125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: wecB
locus tag: VA249_RS01125
old locus tag: VYA_02110
EC number: 5.1.3.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017074475.1
GO function: GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
translation: MFKIMTVVGARPQFIKAAAVSKAIRKHSNLTEIMLHTGQHFDQNMSDVFFNQLNIPKPEIMLDINGTSHGAMTGRMVEGIEEAIFKYKPDAVLLYGDTNSTLAGAISASKLHIPVFHIESGLRSGNMKMPEEINRILTDQVSDTLYCPTDTAVRNLNLENIIQTRNCRVRLVGDVMQDASIIFKEYSLKPNDYDAKANFCLCTIHRAENTDDPDKLTQIFAALDKIHSEHLEVVMPLHPRTKSLLSRFKIETNITLIEPSSYFGMLWLLEHCDMVVTDSGGVQKEAYFFNKMCLTVRDQTEWTELVDIGVNSLTKATCNEIYNNFINLRAKNFGVQEELYGGGQASTMIVEDILNRLEELRSEG
SIO_010081: VA249_RS01125
subclass of: SO_0000673
so part of: VA249_RS01125
location: 239637..240731
location: region:239637-240731:1
so has part: feature:239637-240731:1:exon

WP_221068539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239637-240731:1:exon

VA249_RS01130
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01130
old locus tag: VYA_02120
so part of: sequence
location: 240721..241866
location: region:240721-241866:1
so has part: feature:240721-241866:1:exon
subclass of: SO_0000010

position:240721:1
position: 240721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241866:1
position: 241866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240721-241866:1:exon

VA249_RS01130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01130
old locus tag: VYA_02120
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF012744.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MKAKLLYLVPSLNFFAEGYRGRVMHALGICEGFASDKWDVTFVGGKGIKSFKSELPASVNFIEVEEPTGIFKYPIWWLRFIRVYLSLIKTNEYKCMMSRYVVSSFIPILLFSLFSKKETFKIVEVNSFAYHMLSKLPSLVNKLVARFEMILMNHYNLVYVVSDTMVTDPRNASCKSKIVCVPNGATTKKVNFVPTTINNTASARLVYFGTLMPYWDFEFLVNAVNELHSSIDMKIVFLGDGPKIEYLKQNIHRKELCVFHGRFGRNELGSLLNKEHDILLLPPKTKEDMLLSGGLSTKLFDYLSMRMPIVAPSDGEIENVLSHKVNSVLYSSSSTLDFSKKVIDISSNVEQRSIISDAAYSDFKNKYSWSARMKTIIGEIS
SIO_010081: VA249_RS01130
subclass of: SO_0000673
so part of: VA249_RS01130
location: 240721..241866
location: region:240721-241866:1
so has part: feature:240721-241866:1:exon

WP_221068540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240721-241866:1:exon

VA249_RS01135
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01135
old locus tag: VYA_02130
so part of: sequence
location: 241868..243007
location: region:241868-243007:1
so has part: feature:241868-243007:1:exon
subclass of: SO_0000010

position:241868:1
position: 241868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243007:1
position: 243007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241868-243007:1:exon

VA249_RS01135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01135
old locus tag: VYA_02130
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF016145.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide pyruvyl transferase family protein
translation: MSTRLSVGIITFHNASNYGAALQAFATYKACIELGADVEVIDYVTDYRANKYSALQRIIQPAKKFKFFSALKMLVASPGVISRNLSFSNFYKENIVISQRRFSTPDELKSFDFDYTTVIAGSDQIWSHHNNGSDFSYLLDFVGDDVNKVSYASSFGIADIPLNLENKYRESLNRINFLSTREETGVKLIKELTGKDAFLALDPVLLHDRNFWSQMARKPKRLLGNKFDLYYLNSNRYRSHKIFTNDFVEGVDKICIGSFKLGDVFDNNFKLRNNEGPLEFLYYIENARYIYTTSFHAVVFSLIFNKPFFVFLSGNEGRDSRIKQVLGEFDLLSHALLDSDCDLHSLECKPDFTNFNERWSSNRSDCLSFLENALKGDVS
SIO_010081: VA249_RS01135
subclass of: SO_0000673
so part of: VA249_RS01135
location: 241868..243007
location: region:241868-243007:1
so has part: feature:241868-243007:1:exon

WP_221068541.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241868-243007:1:exon

VA249_RS01140
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: murB
locus tag: VA249_RS01140
old locus tag: VYA_02140
so part of: sequence
location: 243004..244107
location: region:243004-244107:1
so has part: feature:243004-244107:1:exon
subclass of: SO_0000010

position:243004:1
position: 243004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244107:1
position: 244107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243004-244107:1:exon

VA249_RS01140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: murB
locus tag: VA249_RS01140
old locus tag: VYA_02140
EC number: 1.3.1.98
inference: COORDINATES: protein motif:HMM:TIGR00179.1
GO function: GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramate dehydrogenase
translation: MSGAVNKLERSENFDISSNLTMGIGGKVKSFIQINSVEELEIAHNNILKLESKYLVLGGGSNLVLSDNFYDGVVLFIKIKGIKEVCRKNGYAIIDVGAGEEWEDFVDFTLENCFWGVENLTLIPGTVGACPVQNVGAFGQEVKHIIEHVECYDTQTKELTIIQNSECGFSFRKSIFNSEQKGRYIITSVRFKLALEPNAKLSRSELAKLKTFSGTPQELQKEIRNTVRAYRTSGVNLPNNQNHGCSGTFFRTAVLDSYKDFFKVILCTGRNLGIRSAIMMILFCIKYRSSEGFRIPSKRLIQACELSNTKVGALFLLPTNPAVVVSELEHSPNSEDLVKIIDIVRGKVLSKTGVSLPIEPELIGFDM
SIO_010081: VA249_RS01140
subclass of: SO_0000673
so part of: VA249_RS01140
location: 243004..244107
location: region:243004-244107:1
so has part: feature:243004-244107:1:exon

WP_221068542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243004-244107:1:exon

VA249_RS01145
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01145
old locus tag: VYA_02150
so part of: sequence
location: 244178..245281
location: region:244178-245281:1
so has part: feature:244178-245281:1:exon
subclass of: SO_0000010

position:244178:1
position: 244178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245281:1
position: 245281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244178-245281:1:exon

VA249_RS01145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01145
old locus tag: VYA_02150
EC number: 2.3.-.-
inference: COORDINATES: protein motif:HMM:NF013884.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyltransferase
translation: MRNNSFFIGINGLRAIAILSVAILHFSTAFLDYNLTFDRSFIDSDSLLRQIHRAGMDGVYLFFGISGFLITHYLTKSHFSLKFSWEFIKKRVSRIYPPFIGSIFILMFVQLYFSDYSMSDLMKSAAVSTVFMHDLFFKSYSYINPVTWSLEVEVQFYIFASIFVPLFISNKKFLISFFIVVIAGWALLELSVRENYGSRFFSDYILYFFSGVLANVFYKDLEGWFVSSSIAFDIAFVIALVFFFYVDVKLLQSLTLFALILLSFKIKWLNELFASRIISYVSKVSYTYYLFHYAIFHMFMKLFSNAITNSGGFEISVTIGMLIFIPLSFFMIYPFYFLLERNHEKREGYFEYLGNLQLQMLGKKDAR
SIO_010081: VA249_RS01145
subclass of: SO_0000673
so part of: VA249_RS01145
location: 244178..245281
location: region:244178-245281:1
so has part: feature:244178-245281:1:exon

WP_221068543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244178-245281:1:exon

VA249_RS01150
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01150
old locus tag: VYA_02160
so part of: sequence
location: 245271..246032
location: region:245271-246032:1
so has part: feature:245271-246032:1:exon
subclass of: SO_0000010

position:245271:1
position: 245271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246032:1
position: 246032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245271-246032:1:exon

VA249_RS01150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01150
old locus tag: VYA_02160
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017063141.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
translation: MLDKKKVSIIMPTYNAGEFISHTIESVISQSYADWELLIVDDKSTDNTVEVVLSYIDNEPRIRLFSNEVNSGAGVSRNLGLDNSKGRYIAFLDSDDLWVKDKLKLQLEFMNESNAPISHTSFTFIDENGDDRKGIVSVSSLVNLESNLKKTEIGTSTAVIDRELVTHSFRFSAIRARQDLKLWIDLLSLGYISHGLSKELVKYRVRSGSVSSNKIKMLFVTFKVYLNIKAMPFHKRFYCYLAYVFNAIRKRQQ
SIO_010081: VA249_RS01150
subclass of: SO_0000673
so part of: VA249_RS01150
location: 245271..246032
location: region:245271-246032:1
so has part: feature:245271-246032:1:exon

WP_221068544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245271-246032:1:exon

VA249_RS01155
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01155
old locus tag: VYA_02170
so part of: sequence
location: 246029..246946
location: region:246029-246946:1
so has part: feature:246029-246946:1:exon
subclass of: SO_0000010

position:246029:1
position: 246029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246946:1
position: 246946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246029-246946:1:exon

VA249_RS01155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01155
old locus tag: VYA_02170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010433957.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent epimerase/dehydratase family protein
translation: MSEILVTGCTGFVGRNLSNLIGDARYVVRNSKVGYYKDTFSIEGLNTKTDWYGAFKGIRTVIHLAGLAHCKSVGADDFDMVNTQGTLHLAKESALNGVKRFVFVSSIGVNGLLSISKPFCYKTIPQPHNSYARSKLNAEIGLRKISEETGLEVVIVRPTLVYGPSAPGNFGTLTKLVHKVTFLPFGMASNRRDFIAVQNLADLLVTCANHPDAAGHTFLASDGETVSIKEFTNAIAEGLGKKVIQLPVPVSVMRLAGKLTGKSAMIEQLYGNLEVDSSNIKEVLDWTPPLTMKQAMATLRDSGVK
SIO_010081: VA249_RS01155
subclass of: SO_0000673
so part of: VA249_RS01155
location: 246029..246946
location: region:246029-246946:1
so has part: feature:246029-246946:1:exon

WP_221068545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246029-246946:1:exon

VA249_RS01160
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01160
old locus tag: VYA_02180
so part of: sequence
location: 246950..247498
location: region:246950-247498:1
so has part: feature:246950-247498:1:exon
subclass of: SO_0000010

position:246950:1
position: 246950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247498:1
position: 247498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246950-247498:1:exon

VA249_RS01160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01160
old locus tag: VYA_02180
EC number: 2.7.8.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010317076.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar transferase
translation: MIRLIDFLAAFFGLLFLWPVLLIVTIIGLFDTGSPIFVQERVGRNKKPFKLIKFRTMSVETKSVASHLASNASITKLGGFLRKTKIDELPQLINVVKGEMSLVGPRPNLFNQKELIAERDCMGVYDVLPGITGLAQVQNIDMSTPALLAKTDKQMIDTLTVKDYFKYIMMTVTGSGSGDAVK
SIO_010081: VA249_RS01160
subclass of: SO_0000673
so part of: VA249_RS01160
location: 246950..247498
location: region:246950-247498:1
so has part: feature:246950-247498:1:exon

WP_221068546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246950-247498:1:exon

VA249_RS01165
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01165
old locus tag: VYA_02190
so part of: sequence
location: 247714..249663
location: region:247714-249663:1
so has part: feature:247714-249663:1:exon
subclass of: SO_0000010

position:247714:1
position: 247714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249663:1
position: 249663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247714-249663:1:exon

VA249_RS01165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01165
old locus tag: VYA_02190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016787291.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside-diphosphate sugar epimerase/dehydratase
translation: MQRLQFLWQLSRTNKRIVSVLIDTVLIFLAFHLAILVRSGETNYFTYPAVWGIQVVVTLITVVVFARLGLYRAVLRYLTFQALFVVTAGAVVSATVVAALSFYMSDPFPRTVPIIYGAFLALFCGGPRVIVRSLVAQSYANNQNKEVLIYGAGSGGRQLAMALRSSGEYRVRAFVDGDPTLCNTMILGLPVFAIEDVMPVINKYDISQILLAVPSAKRSRRKLILDDLAKLPVEVLTVPDMTDIVSGKAKIDELKDVAIEDLLGRDPVAPQQVLLEANIKDKVVMVTGAGGSIGSELCRQIVEQSPTAIILFELSEFGLYQIDRELNLLKQQKGLSCDIIPLLGSVQRQHRLETIMASFKVQTVYHAAAYKHVPLVEYNVIEGVRNNVYGTYYTATAAIKAGVESFVLISTDKAVRPTNVMGTTKRMAELGLQALAEQENEKANGTRFCMVRFGNVLGSSGSVIPLFKKQIAAGGPVTVTHPDITRYFMTIPEAAQLVIQAGAMGKGGDVFVLDMGESVKITDLARNLIQLSGLEVKAETNPYGDIEIQFAGLRPGEKLYEELLIGDNVKQTAHERIMTAHEVHLSLSDYESLINELDLACHGMDHEKIRSLLLSAPTGFNPTDGIGDLVWKHNHIDEEVINIHQAVNE
SIO_010081: VA249_RS01165
subclass of: SO_0000673
so part of: VA249_RS01165
location: 247714..249663
location: region:247714-249663:1
so has part: feature:247714-249663:1:exon

WP_221068547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247714-249663:1:exon

VA249_RS01170
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01170
old locus tag: VYA_02200
so part of: sequence
location: complement(250137..251486)
location: region:250137-251486:-1
so has part: feature:250137-251486:-1:exon
subclass of: SO_0000010

position:250137:-1
position: 250137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251486:-1
position: 251486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250137-251486:-1:exon

VA249_RS01170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01170
old locus tag: VYA_02200
EC number: 3.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017817232.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBL fold metallo-hydrolase
translation: MTTTICDLASVIHHGGKHTVTGSCHELKLSLGSILIDCGLFQGKDIQFGGRDASLNIEFSIKQVKALVLTHAHIDHIGRLPWLLAAGFKGPIYCTKATAELVPLMLEDGLKLQLGLKYHQRQQVLNVIKKQLKPCHYQQWLPLGEQHYLRFQPAGHILGSAYVEFKLPNSEVIVFSGDLGPSNTPLLPDPKSPKQADYLFIESTYGNKQHDNVSTRTARLNQIIDHALKDGGVILIPAFSVGRTQELLFDIEQLIHQRDLHSSLPIILDSPLAKQVTKTYRRFKKLWSTEAKNKLNHQRHPLSFEQCITVDNHREHQALVNRLASTDEPAIVVAASGMCEGGRIVNYLEALLPDEKNDVLFAGYQAQGTLGQAIQQGDSEISIGEQRVEVNAQIHTMSGYSAHADQADLLRFITGIPAKPKAVHLIHGETNAKRELGELTERYGIKVVD
SIO_010081: VA249_RS01170
subclass of: SO_0000673
so part of: VA249_RS01170
location: complement(250137..251486)
location: region:250137-251486:-1
so has part: feature:250137-251486:-1:exon

WP_221068548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:250137-251486:-1:exon

VA249_RS01175
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01175
old locus tag: VYA_02210
so part of: sequence
location: 252361..253527
location: region:252361-253527:1
so has part: feature:252361-253527:1:exon
subclass of: SO_0000010

position:252361:1
position: 252361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253527:1
position: 253527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252361-253527:1:exon

VA249_RS01175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01175
old locus tag: VYA_02210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014230643.1
GO function: GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO process: GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotide sugar dehydrogenase
translation: MKIAVAGTGYVGLSNAMLLAQNHEVVAVDIIPEKVELLNNKQSPIVDAEIEYFLANKTLNFVATTDKASAYRDAEYVVIATPTDYDPTTNYFNTSSVEAVIKDVMTINPDAVMVIKSTVPVGYTARIKQEMNCENIIFSPEFLREGKALYDNLYPSRVIVGERSERAEMFAGLLVEGAIKEDIQVLFTDSTEAEAVKLFSNTYLAMRVAYFNELDSYAEAHGLDARQIIEGVGLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYQEVPNNIIGAIVEANRTRKDFVAESIIKRQPKVVGIYRLIMKAGSDNFRASSIQGIMKRIKAKGIEVVVYEPVLKEQEFFNSRVIQDLNEFKQTADVIVSNRMVEELADVAEKIYTRDLFGSD
SIO_010081: VA249_RS01175
subclass of: SO_0000673
so part of: VA249_RS01175
location: 252361..253527
location: region:252361-253527:1
so has part: feature:252361-253527:1:exon

WP_221068549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252361-253527:1:exon

VA249_RS01180
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01180
old locus tag: VYA_02220
so part of: sequence
location: 253596..254600
location: region:253596-254600:1
so has part: feature:253596-254600:1:exon
subclass of: SO_0000010

position:253596:1
position: 253596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254600:1
position: 254600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253596-254600:1:exon

VA249_RS01180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01180
old locus tag: VYA_02220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016785058.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent epimerase
translation: MKYLVTGAAGFIGSATAEKLNAAGHEVVGIDNLNDYYDVNLKHARLARIENPLFKFVNVDIADRDAVTRLFAAEKFERVIHLAAQGGVRYSLENPHAYADSNLVGHLNILEGCRHNQVQHLVYASSSSVYGLNAKVPFATSDTVDHPVSLYAATKKSNELMAHSYSHLYDIPTTGLRFFTVYGAWGRPDMAPFIFTKKILDGDIIDINNNGDMWRDFTHVDDIVEGVVRIADVIPQKNEAWTVETGTPASSSAPYAVYNIGHGSPINLMDFVKAIEDELGIEAKKNFREMQPGDVYQTYADTEDLFTATGYKPQVSVKEGVAEFVAWYKDFYGK
SIO_010081: VA249_RS01180
subclass of: SO_0000673
so part of: VA249_RS01180
location: 253596..254600
location: region:253596-254600:1
so has part: feature:253596-254600:1:exon

WP_221068550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:253596-254600:1:exon

VA249_RS01185
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01185
old locus tag: VYA_02230
so part of: sequence
location: 254665..254817
location: region:254665-254817:1
so has part: feature:254665-254817:1:exon
subclass of: SO_0000010

position:254665:1
position: 254665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254817:1
position: 254817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254665-254817:1:exon

VA249_RS01185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01185
old locus tag: VYA_02230
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFWITDYGLRITDYGLRITDYGLRITDYGLRITDYGLRITDYGLRITRNR
SIO_010081: VA249_RS01185
subclass of: SO_0000673
so part of: VA249_RS01185
location: 254665..254817
location: region:254665-254817:1
so has part: feature:254665-254817:1:exon

WP_221068551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254665-254817:1:exon

VA249_RS01190
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: tpiA
locus tag: VA249_RS01190
old locus tag: VYA_02240
so part of: sequence
location: complement(255190..255960)
location: region:255190-255960:-1
so has part: feature:255190-255960:-1:exon
subclass of: SO_0000010

position:255190:-1
position: 255190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255960:-1
position: 255960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255190-255960:-1:exon

VA249_RS01190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: tpiA
locus tag: VA249_RS01190
old locus tag: VYA_02240
EC number: 5.3.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011079322.1
GO function: GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: triose-phosphate isomerase
translation: MRRPVVMGNWKLNGSKAMVTELLAGINAELEGVEGVDVAVAPPALYIGLAECVIAEGDNKIILGAQNTDLNNSGAFTGDMSPEMLKDFGATHIIIGHSERREYHNESDEFIAKKFNFLKENGLTPVFCIGESEAQNEAGETEAVCARQINAVIDTYGVEALNGAIIAYEPIWAIGTGKAATAEDAQRIHASIRALIAAKDEAVAEQVIIQYGGSVKPENAEAYFSQPDIDGALVGGASLDAKSFVAIAKAAAAAKA
SIO_010081: VA249_RS01190
subclass of: SO_0000673
so part of: VA249_RS01190
location: complement(255190..255960)
location: region:255190-255960:-1
so has part: feature:255190-255960:-1:exon

WP_128811859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255190-255960:-1:exon

VA249_RS01195
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01195
old locus tag: VYA_02250
so part of: sequence
location: 256234..256581
location: region:256234-256581:1
so has part: feature:256234-256581:1:exon
subclass of: SO_0000010

position:256234:1
position: 256234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256581:1
position: 256581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256234-256581:1:exon

VA249_RS01195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01195
old locus tag: VYA_02250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008219643.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase
translation: MPNLVLEYSNSVDERVNVQGLLEDLHKVAIGTGLFDVASVKSRALRCHHWLVGDEGDSVDFIHLNFDLLSGRTPEQKRDLSRALMTVLQEQASHVRSLTVNVRDMDIDCFQKVVN
SIO_010081: VA249_RS01195
subclass of: SO_0000673
so part of: VA249_RS01195
location: 256234..256581
location: region:256234-256581:1
so has part: feature:256234-256581:1:exon

WP_221068552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256234-256581:1:exon

VA249_RS01200
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01200
old locus tag: VYA_02260
so part of: sequence
location: 257239..257661
location: region:257239-257661:1
so has part: feature:257239-257661:1:exon
subclass of: SO_0000010

position:257239:1
position: 257239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257661:1
position: 257661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257239-257661:1:exon

VA249_RS01200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01200
old locus tag: VYA_02260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005528524.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF805 domain-containing protein
translation: MSIKELLFSFQGRIGRKTYWAWNIVYYISILGFGVGINKLFSAFSYIILPVFLLILLIPDLAITTKRWHDRNKSIYWLALNIPLIIGRIATPMTNPDAQAASTPQMLIASVSLICGVWILVECGFLKGTAGQNHYGPEPE
SIO_010081: VA249_RS01200
subclass of: SO_0000673
so part of: VA249_RS01200
location: 257239..257661
location: region:257239-257661:1
so has part: feature:257239-257661:1:exon

WP_221068553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257239-257661:1:exon

VA249_RS01205
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01205
old locus tag: VYA_02270
so part of: sequence
location: complement(257883..258227)
location: region:257883-258227:-1
so has part: feature:257883-258227:-1:exon
subclass of: SO_0000010

position:257883:-1
position: 257883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258227:-1
position: 258227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257883-258227:-1:exon

VA249_RS01205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01205
old locus tag: VYA_02270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005428106.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3135 domain-containing protein
translation: MTAPHKPQVLPSFDDMVKMAKHDPEAFEQFRHEMAKEMIESASEEMQPRLWAQQSHIDRVINNCKNPNHTNVVLMNELQKQVVKFREALQGETAPAQKADVVSLKTFKDRDDFY
SIO_010081: VA249_RS01205
subclass of: SO_0000673
so part of: VA249_RS01205
location: complement(257883..258227)
location: region:257883-258227:-1
so has part: feature:257883-258227:-1:exon

WP_221068554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257883-258227:-1:exon

VA249_RS01210
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01210
old locus tag: VYA_02280
so part of: sequence
location: complement(258416..259042)
location: region:258416-259042:-1
so has part: feature:258416-259042:-1:exon
subclass of: SO_0000010

position:258416:-1
position: 258416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259042:-1
position: 259042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258416-259042:-1:exon

VA249_RS01210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01210
old locus tag: VYA_02280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005446749.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator
translation: MKTVDRILQIVKRDGSVTAKQLSSELNMTTMGARQHLQGLEDDGILSIHDVKVKVGRPTRHWSLTQKGHEQFADRHGELTIQFIEAVEHIFGKDGLDKVTSEREKLTLKHYQWHLAQCDSLEDKLNKLVSLREKEGYMAELDQDEQGLILIENHCPICKAATRCPSLCQSELNVFQSLLGNDTLIERTEHIINGQRRCVYRIQEPISD
SIO_010081: VA249_RS01210
subclass of: SO_0000673
so part of: VA249_RS01210
location: complement(258416..259042)
location: region:258416-259042:-1
so has part: feature:258416-259042:-1:exon

WP_221068555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258416-259042:-1:exon

VA249_RS01215
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: glpX
locus tag: VA249_RS01215
old locus tag: VYA_02290
so part of: sequence
location: complement(259216..260223)
location: region:259216-260223:-1
so has part: feature:259216-260223:-1:exon
subclass of: SO_0000010

position:259216:-1
position: 259216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260223:-1
position: 260223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259216-260223:-1:exon

VA249_RS01215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: glpX
locus tag: VA249_RS01215
old locus tag: VYA_02290
EC number: 3.1.3.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001887310.1
GO function: GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
GO process: GO:0006094 - gluconeogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class II fructose-bisphosphatase
translation: MKRDLAMAFSRVTEGAALAGYKWLGRGDKNAADGAAVEVMRTLLNKTDISGEIVIGEGEIDDAPMLFIGEQVGTGGDAVDIAVDPIEGTRMTAMGQSNALAVLAAGEKGSFLKAPDMYMEKLVVGPGAKGAIDLNKPLKENLENVAKALNKSLDTLVVITLAKPRHDDVIAEMQAMGVRVFAVPDGDVAASILTCMPDSEVDLMYCIGGAPEGVVSAAVIRALDGDMHGRLLPRHEVKGDTEENRIYGTAELKRCEEMGVQANVVLKMEDMARSDNVIFSATGITKGDLLEGITRQGNIATTETLLIRGRCRTIRRIKSTHYLERKDPEVRDIIL
SIO_010081: VA249_RS01215
subclass of: SO_0000673
so part of: VA249_RS01215
location: complement(259216..260223)
location: region:259216-260223:-1
so has part: feature:259216-260223:-1:exon

WP_221068556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259216-260223:-1:exon

VA249_RS01220
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: zapB
locus tag: VA249_RS01220
old locus tag: VYA_02300
so part of: sequence
location: 260569..260811
location: region:260569-260811:1
so has part: feature:260569-260811:1:exon
subclass of: SO_0000010

position:260569:1
position: 260569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260811:1
position: 260811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260569-260811:1:exon

VA249_RS01220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: zapB
locus tag: VA249_RS01220
old locus tag: VYA_02300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000007389.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO process: GO:0090529 - cell septum assembly [Evidence IEA]; GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein ZapB
translation: MSFEVLEKLEAKIQTAVDTITLLQMEVEELKEDKVKLEAEANELRSQREDLEQKSQQAQQEHAQWQERIRALLGKMDEVE
SIO_010081: VA249_RS01220
subclass of: SO_0000673
so part of: VA249_RS01220
location: 260569..260811
location: region:260569-260811:1
so has part: feature:260569-260811:1:exon

WP_211915513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260569-260811:1:exon

VA249_RS01225
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rraA
locus tag: VA249_RS01225
old locus tag: VYA_02310
so part of: sequence
location: complement(261450..261956)
location: region:261450-261956:-1
so has part: feature:261450-261956:-1:exon
subclass of: SO_0000010

position:261450:-1
position: 261450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261956:-1
position: 261956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261450-261956:-1:exon

VA249_RS01225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rraA
locus tag: VA249_RS01225
old locus tag: VYA_02310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005457192.1
GO function: GO:0008428 - ribonuclease inhibitor activity [Evidence IEA]
GO process: GO:0051252 - regulation of RNA metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease E activity regulator RraA
translation: MEYNTSALCDIYLDQVDVVEPMFSNFGGRASFAGQITTIKCFEDNALIRETLEQDGIGRVLLIDGGGSLRKALIDAEIAALAEENEWEGIIVYGCVREVDVLEDMNLGIQALASIPVGAASQGIGEHDVPVNFGSVSFLPEDYVYADSTGIILSPEPLNVDLELGEEE
SIO_010081: VA249_RS01225
subclass of: SO_0000673
so part of: VA249_RS01225
location: complement(261450..261956)
location: region:261450-261956:-1
so has part: feature:261450-261956:-1:exon

WP_128811845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261450-261956:-1:exon

VA249_RS01230
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01230
old locus tag: VYA_02320
so part of: sequence
location: complement(262033..262950)
location: region:262033-262950:-1
so has part: feature:262033-262950:-1:exon
subclass of: SO_0000010

position:262033:-1
position: 262033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262950:-1
position: 262950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262033-262950:-1:exon

VA249_RS01230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01230
old locus tag: VYA_02320
EC number: 2.5.1.74
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017061151.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0046428 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity [Evidence IEA]
GO process: GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 1,4-dihydroxy-2-naphthoate polyprenyltransferase
translation: MKQSLQIWLDAARPKTLPLALVSILTGSVLAYSTGQFSMTIAIMAFVTATLLQILSNLANDYGDAVKGTDNENRLGPQRAMQSGAVTAEQMKKAIIFNVVLTIIAGLILVFYSLSSFESIITFIGLGVLAILAAIAYTMGSKPYGYVGLGDLSVFLFFGLLGVSGTYFLHTGHVDAALFLPALGCGLLAVAVLNINNMRDIENDTECGKRTVAVRLGQRKAKQYHFILLAGALLAFAVYLLIQDKPVWISLPFLLSIYVVAHHGKAVWETKAPAQIAPMMPVIVKCSLVTNVLFATIVVAQTLIS
SIO_010081: VA249_RS01230
subclass of: SO_0000673
so part of: VA249_RS01230
location: complement(262033..262950)
location: region:262033-262950:-1
so has part: feature:262033-262950:-1:exon

WP_221068557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:262033-262950:-1:exon

VA249_RS01235
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: hslU
locus tag: VA249_RS01235
old locus tag: VYA_02330
so part of: sequence
location: complement(263241..264572)
location: region:263241-264572:-1
so has part: feature:263241-264572:-1:exon
subclass of: SO_0000010

position:263241:-1
position: 263241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264572:-1
position: 264572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263241-264572:-1:exon

VA249_RS01235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: hslU
locus tag: VA249_RS01235
old locus tag: VYA_02330
EC number: 3.4.25.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019830204.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HslU--HslV peptidase ATPase subunit
translation: MSEMTPREIVHELNRHIIGQDKAKRSVAIALRNRWRRMQLEESLRVEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVETIIRDLTDVAVKMTHQQAMEKVKFRAEEQAEERVLDALLPPARDAWGQTEQKEDTSNTRQVFRKKLREGQLDDKEIEIDVAAPQMGVEIMAPPGMEEMTNQLQGMFQNLAGDTKKKRKLKIKDAMKALAEEEAAKLVNHEELKESAIFNVENNGIVFIDEIDKICKRGESSGPDVSREGVQRDLLPLIEGSTVSTKHGMVKTDHILFVASGAFQVARPSDLIPELQGRLPIRVELEALTSNDFKRILTEPKASLTEQYIALMKTESVDVEFTEDGITQIAEAAWTVNETTENIGARRLHTVMERLMDEISYDATEKAGEKFVINAAYVKERLGDTIENEDLSRFIL
SIO_010081: VA249_RS01235
subclass of: SO_0000673
so part of: VA249_RS01235
location: complement(263241..264572)
location: region:263241-264572:-1
so has part: feature:263241-264572:-1:exon

WP_221068558.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:263241-264572:-1:exon

VA249_RS01240
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: hslV
locus tag: VA249_RS01240
old locus tag: VYA_02340
so part of: sequence
location: complement(264602..265153)
location: region:264602-265153:-1
so has part: feature:264602-265153:-1:exon
subclass of: SO_0000010

position:264602:-1
position: 264602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265153:-1
position: 265153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264602-265153:-1:exon

VA249_RS01240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: hslV
locus tag: VA249_RS01240
old locus tag: VYA_02340
EC number: 3.4.25.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009844179.1
GO function: GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]
GO process: GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent protease subunit HslV
translation: MTTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNQVLAGFAGGTADAFTLFERFESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGGAYAQAAATALLENTDLDAREIAEKALNIAGDICVFTNHNHTVEELESTVELPKPTA
SIO_010081: VA249_RS01240
subclass of: SO_0000673
so part of: VA249_RS01240
location: complement(264602..265153)
location: region:264602-265153:-1
so has part: feature:264602-265153:-1:exon

WP_038864894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264602-265153:-1:exon

VA249_RS01245
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01245
old locus tag: VYA_02350
so part of: sequence
location: complement(265319..265861)
location: region:265319-265861:-1
so has part: feature:265319-265861:-1:exon
subclass of: SO_0000010

position:265319:-1
position: 265319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265861:-1
position: 265861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265319-265861:-1:exon

VA249_RS01245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01245
old locus tag: VYA_02350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005496929.1
GO function: GO:0042834 - peptidoglycan binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SPOR domain-containing protein
translation: MANKDYVRRGRGAPKKSAKKQPSRKKPWRSGLLALLLVGGFGYGLYLLNSDPEPEQPVVQQQTSTSKPKPKKELPPPPEEKWEYVESLPNREVEVIAKEVEVSKIPYVMQCGAYKKQSQAEERKLAIAFQGISSNVIKKDGSSWYRVVLGPYKFKRDAEKDRHKLQRAKIEPCAIWKENF
SIO_010081: VA249_RS01245
subclass of: SO_0000673
so part of: VA249_RS01245
location: complement(265319..265861)
location: region:265319-265861:-1
so has part: feature:265319-265861:-1:exon

WP_221068559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265319-265861:-1:exon

VA249_RS01250
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: cytR
locus tag: VA249_RS01250
old locus tag: VYA_02360
so part of: sequence
location: complement(266002..267006)
location: region:266002-267006:-1
so has part: feature:266002-267006:-1:exon
subclass of: SO_0000010

position:266002:-1
position: 266002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267006:-1
position: 267006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266002-267006:-1:exon

VA249_RS01250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: cytR
locus tag: VA249_RS01250
old locus tag: VYA_02360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005429951.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding transcriptional regulator CytR
translation: MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRQRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTAAFEAVNYLTHLGHKRIAQVSGPETAVLCQFRQQGYQQALRRAGITQNAQYSVVTDFSFEGGAQAVRKLLELSEPPTAIFCHCDTMAIGALQEAKRLGWRVPQDLSVVGFDDIQFAQYCDPPLTTVSQPRYEIGRQAMLMMLELLKGHDVHSGSRLLDTKLVVRGSAAPPLR
SIO_010081: VA249_RS01250
subclass of: SO_0000673
so part of: VA249_RS01250
location: complement(266002..267006)
location: region:266002-267006:-1
so has part: feature:266002-267006:-1:exon

WP_221068560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266002-267006:-1:exon

VA249_RS01255
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: priA
locus tag: VA249_RS01255
old locus tag: VYA_02370
so part of: sequence
location: complement(267211..269412)
location: region:267211-269412:-1
so has part: feature:267211-269412:-1:exon
subclass of: SO_0000010

position:267211:-1
position: 267211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269412:-1
position: 269412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267211-269412:-1:exon

VA249_RS01255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: priA
locus tag: VA249_RS01255
old locus tag: VYA_02370
EC number: 3.6.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017630923.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: primosomal protein N'
translation: MRPSIARVALPVPLDKQFDYIIPGHLFPIIGGRVSVPFGRQTLVGIVTAMVNHSDFPKAQLKPIKAVLDTQPIWSEKLYSLLTWCSHFYQYPLGDTLHNAMPAALRKGKPADFATLQEWQITASGKDKLMQGLGRAVKQQRALQMLINGAIPHQEFVDQEIASTVLKSLEEKGWIESIEKKPTITKWGQQVECNVEKPKLNHEQALAIASVNSQTGFACYLLEGVTGSGKTEVYLNLIKPILEKGKQALVLVPEIGLTPQTINRFKRRFNVPVDVIHSGLNDTERLNAWLSARDKAAGIIIGTRSALLTPFADLGIIIVDEEHDASYKQQDSLRYHARDVAVMRAHKEQVPIVLGSATPALETLHNALSGKYHHLTLTKRAGSAVPTTNKVLDVKGQFLESGLSATLIAEMRKHLKAGNQVMLFLNRRGFSPALMCHECGWIAECKRCDAYYTFHQYSNEIRCHHCGSQQPIIHQCQGCGSTHLVTVGVGTEQLEQQLTQLFPEYKAIRIDRDSTRRKGSLEDALESIRKGEYQILIGTQMLAKGHHFPNVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVILQTHHPEHSLLQALLQKDYRHFAMTALEERKLAQLPPYSFLTLFKAEANQSELVEDFLRQVRFTLESHPLFDESCMVLGPTPSPLAKRAGKYRWQLLLQTQHRSLMQKLLSSAKPAIELLPNAKKVRWNLDIEPQDLS
SIO_010081: VA249_RS01255
subclass of: SO_0000673
so part of: VA249_RS01255
location: complement(267211..269412)
location: region:267211-269412:-1
so has part: feature:267211-269412:-1:exon

WP_221068561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:267211-269412:-1:exon

VA249_RS01260
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rpmE
locus tag: VA249_RS01260
old locus tag: VYA_02380
so part of: sequence
location: 269710..269931
location: region:269710-269931:1
so has part: feature:269710-269931:1:exon
subclass of: SO_0000010

position:269710:1
position: 269710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269931:1
position: 269931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269710-269931:1:exon

VA249_RS01260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rpmE
locus tag: VA249_RS01260
old locus tag: VYA_02380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005379546.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L31
translation: MKAGIHPEYKAVSATCSCGNSFEFNSTLGKESIHLDVCDKCHPFYTGKQRIVDTGGRVDRFNKRFGALSSGKK
SIO_010081: VA249_RS01260
subclass of: SO_0000673
so part of: VA249_RS01260
location: 269710..269931
location: region:269710-269931:1
so has part: feature:269710-269931:1:exon

WP_128811835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269710-269931:1:exon

VA249_RS01265
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rpsJ
locus tag: VA249_RS01265
old locus tag: VYA_02390
so part of: sequence
location: 270409..270720
location: region:270409-270720:1
so has part: feature:270409-270720:1:exon
subclass of: SO_0000010

position:270409:1
position: 270409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270720:1
position: 270720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270409-270720:1:exon

VA249_RS01265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rpsJ
locus tag: VA249_RS01265
old locus tag: VYA_02390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S10
translation: MQNQRIRIRLKAFDYKLIDASTAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKKARDQYEIRTHKRLIDIVEPTDKTVDALMRLDLAAGVDVQISLG
SIO_010081: VA249_RS01265
subclass of: SO_0000673
so part of: VA249_RS01265
location: 270409..270720
location: region:270409-270720:1
so has part: feature:270409-270720:1:exon

WP_004410492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270409-270720:1:exon

VA249_RS01270
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rplC
locus tag: VA249_RS01270
old locus tag: VYA_02400
so part of: sequence
location: 270735..271364
location: region:270735-271364:1
so has part: feature:270735-271364:1:exon
subclass of: SO_0000010

position:270735:1
position: 270735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271364:1
position: 271364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270735-271364:1:exon

VA249_RS01270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rplC
locus tag: VA249_RS01270
old locus tag: VYA_02400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L3
translation: MIGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLENGEEFEVGAELTVELFNETKKVDVTGTSKGKGFQGAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVDAERNLLLIKGAVPGATGGNVIVKPAIKA
SIO_010081: VA249_RS01270
subclass of: SO_0000673
so part of: VA249_RS01270
location: 270735..271364
location: region:270735-271364:1
so has part: feature:270735-271364:1:exon

WP_211915507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270735-271364:1:exon

VA249_RS01275
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rplD
locus tag: VA249_RS01275
old locus tag: VYA_02410
so part of: sequence
location: 271382..271984
location: region:271382-271984:1
so has part: feature:271382-271984:1:exon
subclass of: SO_0000010

position:271382:1
position: 271382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271984:1
position: 271984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271382-271984:1:exon

VA249_RS01275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rplD
locus tag: VA249_RS01275
old locus tag: VYA_02410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L4
translation: MELMVKGADALTVSETTFGREFNEALVHQVVVAYAAGARQGTRAQKTRSEVSGGGAKPWRQKGTGRARAGTIRSPIWRTGGVTFAAKPQDHSQKVNKKMYRGAMKSILSELVRQERLIVVDNFSVEAPKTKELVAKLKELELTDALIVTSEVDENLFLAARNLYKVDARDVAGIDPVSLIAFDKVVMTAAAVKQVEEMLA
SIO_010081: VA249_RS01275
subclass of: SO_0000673
so part of: VA249_RS01275
location: 271382..271984
location: region:271382-271984:1
so has part: feature:271382-271984:1:exon

WP_211915506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271382-271984:1:exon

VA249_RS01280
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rplW
locus tag: VA249_RS01280
old locus tag: VYA_02420
so part of: sequence
location: 271981..272283
location: region:271981-272283:1
so has part: feature:271981-272283:1:exon
subclass of: SO_0000010

position:271981:1
position: 271981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272283:1
position: 272283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271981-272283:1:exon

VA249_RS01280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rplW
locus tag: VA249_RS01280
old locus tag: VYA_02420
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312210.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L23
translation: MITEERILKVLRAPHISEKATMAAEKANTIVFKVAKDATKKEIKAAVEKLFEVEVKSVNTLITKGKTKRQGLRQGRRSDVKKAYVTLKEGQDLDFVGGAE
SIO_010081: VA249_RS01280
subclass of: SO_0000673
so part of: VA249_RS01280
location: 271981..272283
location: region:271981-272283:1
so has part: feature:271981-272283:1:exon

WP_004398471.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271981-272283:1:exon

VA249_RS01285
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rplB
locus tag: VA249_RS01285
old locus tag: VYA_02430
so part of: sequence
location: 272299..273123
location: region:272299-273123:1
so has part: feature:272299-273123:1:exon
subclass of: SO_0000010

position:272299:1
position: 272299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273123:1
position: 273123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272299-273123:1:exon

VA249_RS01285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rplB
locus tag: VA249_RS01285
old locus tag: VYA_02430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005417230.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L2
translation: MAIVKCKPTSPGRRHVVKVVNADLHKGKPYAPLLEKNSKNGGRNNNGRITVRHIGGGHKHHYRVIDFKRTKDGIPAKVERLEYDPNRSANIALVLYKDGERRYILAPKGLVAGDVVQSGPDAAIKTGNTLPMRNIPVGSTVHNVELKPGKGGQLARSAGAYAQIVARDGAYVTIRLRSGEMRKVLSEGRATIGEVGNSEHMLRELGKAGASRWRGVRPTVRGVVMNPVDHPHGGGEGRTSGGRHPVSPWGMPTKGFKTRKNKRTDKYIVRRRNK
SIO_010081: VA249_RS01285
subclass of: SO_0000673
so part of: VA249_RS01285
location: 272299..273123
location: region:272299-273123:1
so has part: feature:272299-273123:1:exon

WP_128811830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:272299-273123:1:exon

VA249_RS01290
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rpsS
locus tag: VA249_RS01290
old locus tag: VYA_02440
so part of: sequence
location: 273145..273423
location: region:273145-273423:1
so has part: feature:273145-273423:1:exon
subclass of: SO_0000010

position:273145:1
position: 273145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273423:1
position: 273423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273145-273423:1:exon

VA249_RS01290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rpsS
locus tag: VA249_RS01290
old locus tag: VYA_02440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S19
translation: MPRSLKKGPFIDLHLLKKVEKAVESGDKKPLKTWSRRSMIIPTMIGLTIAVHNGRQHVPVFVTEEMIGHKLGEFAPTRTYRGHAADKKAKKR
SIO_010081: VA249_RS01290
subclass of: SO_0000673
so part of: VA249_RS01290
location: 273145..273423
location: region:273145-273423:1
so has part: feature:273145-273423:1:exon

WP_011078827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273145-273423:1:exon

VA249_RS01295
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rplV
locus tag: VA249_RS01295
old locus tag: VYA_02450
so part of: sequence
location: 273434..273766
location: region:273434-273766:1
so has part: feature:273434-273766:1:exon
subclass of: SO_0000010

position:273434:1
position: 273434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273766:1
position: 273766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273434-273766:1:exon

VA249_RS01295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rplV
locus tag: VA249_RS01295
old locus tag: VYA_02450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012549155.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L22
translation: MEAIAKHNFARISPQKARLVADLIRGKSVDQALEILTFSNKKAAVLVKKVLESAIANAEHNEGADIDDLNVAKIFVDEGPTMKRIMPRAKGRADRILKRSSHITVVVADR
SIO_010081: VA249_RS01295
subclass of: SO_0000673
so part of: VA249_RS01295
location: 273434..273766
location: region:273434-273766:1
so has part: feature:273434-273766:1:exon

WP_005528535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273434-273766:1:exon

VA249_RS01300
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rpsC
locus tag: VA249_RS01300
old locus tag: VYA_02460
so part of: sequence
location: 273785..274483
location: region:273785-274483:1
so has part: feature:273785-274483:1:exon
subclass of: SO_0000010

position:273785:1
position: 273785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274483:1
position: 274483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273785-274483:1:exon

VA249_RS01300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rpsC
locus tag: VA249_RS01300
old locus tag: VYA_02460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000529946.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S3
translation: MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQFLTKELQKASLSRIVIERPAKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDAQLVGDSIASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRADIDYATSSAHTQYGVIGIKTWIFKGEILGGMPAANAVEPKADKPKKQRKGRK
SIO_010081: VA249_RS01300
subclass of: SO_0000673
so part of: VA249_RS01300
location: 273785..274483
location: region:273785-274483:1
so has part: feature:273785-274483:1:exon

WP_099079985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273785-274483:1:exon

VA249_RS01305
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rplP
locus tag: VA249_RS01305
old locus tag: VYA_02470
so part of: sequence
location: 274495..274905
location: region:274495-274905:1
so has part: feature:274495-274905:1:exon
subclass of: SO_0000010

position:274495:1
position: 274495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274905:1
position: 274905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274495-274905:1:exon

VA249_RS01305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rplP
locus tag: VA249_RS01305
old locus tag: VYA_02470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L16
translation: MLQPKRTKFRKVQTGRNRGLAKGTDVSFGEFGLKAVGRGRLTARQIEAARRAMTRHVKRQGKIWIRVFPDKPITEKPLEVRQGKGKGNVEYWVAQIQPGKVMYEMGGVPEELAREAFRLAARKLPFKTTFVIKQVM
SIO_010081: VA249_RS01305
subclass of: SO_0000673
so part of: VA249_RS01305
location: 274495..274905
location: region:274495-274905:1
so has part: feature:274495-274905:1:exon

WP_099079984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274495-274905:1:exon

VA249_RS01310
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rpmC
locus tag: VA249_RS01310
old locus tag: VYA_02480
so part of: sequence
location: 274905..275096
location: region:274905-275096:1
so has part: feature:274905-275096:1:exon
subclass of: SO_0000010

position:275096:1
position: 275096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274905-275096:1:exon

VA249_RS01310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rpmC
locus tag: VA249_RS01310
old locus tag: VYA_02480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000647192.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L29
translation: MKAQDLREKSVEELNAELLNLLREQFNLRMQAATGQLQQTHTLKAVRRDIARVKTVLTEKAGA
SIO_010081: VA249_RS01310
subclass of: SO_0000673
so part of: VA249_RS01310
location: 274905..275096
location: region:274905-275096:1
so has part: feature:274905-275096:1:exon

WP_004410456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274905-275096:1:exon

VA249_RS01315
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rpsQ
locus tag: VA249_RS01315
old locus tag: VYA_02490
so part of: sequence
location: 275096..275350
location: region:275096-275350:1
so has part: feature:275096-275350:1:exon
subclass of: SO_0000010

position:275350:1
position: 275350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275096-275350:1:exon

VA249_RS01315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rpsQ
locus tag: VA249_RS01315
old locus tag: VYA_02490
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312203.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S17
translation: MSEVKRTQQGRVVSDKMDKSIVVAIERFVKHPIYGKFVKRTTKVHAHDENNECGLGDKVEIAECRPLSKTKSWTLVKVVEKAKM
SIO_010081: VA249_RS01315
subclass of: SO_0000673
so part of: VA249_RS01315
location: 275096..275350
location: region:275096-275350:1
so has part: feature:275096-275350:1:exon

WP_211915505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275096-275350:1:exon

VA249_RS01320
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rplN
locus tag: VA249_RS01320
old locus tag: VYA_02500
so part of: sequence
location: 275514..275885
location: region:275514-275885:1
so has part: feature:275514-275885:1:exon
subclass of: SO_0000010

position:275514:1
position: 275514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275885:1
position: 275885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275514-275885:1:exon

VA249_RS01320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rplN
locus tag: VA249_RS01320
old locus tag: VYA_02500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L14
translation: MIQMQSMLDAADNSGARSVMCIKVLGGSHRRYAHIGDVIKVTVKEAIPRGKVKKGDVLKAVVVRTRKGVRRPDGSVIRFDRNACVLLNNTTEQPIGTRIFGPVTRELRGNKFMKIVSLAPEVL
SIO_010081: VA249_RS01320
subclass of: SO_0000673
so part of: VA249_RS01320
location: 275514..275885
location: region:275514-275885:1
so has part: feature:275514-275885:1:exon

WP_128811826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275514-275885:1:exon

VA249_RS01325
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rplX
locus tag: VA249_RS01325
old locus tag: VYA_02510
so part of: sequence
location: 275899..276216
location: region:275899-276216:1
so has part: feature:275899-276216:1:exon
subclass of: SO_0000010

position:275899:1
position: 275899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276216:1
position: 276216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275899-276216:1:exon

VA249_RS01325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rplX
locus tag: VA249_RS01325
old locus tag: VYA_02510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000729178.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L24
translation: MAAKIRRNDEVIVLAGKDKGKKGKVTKVLATGKVIVEGINLVKKHQKPVPALGQQGGIVEQEAAIDASNVAIFNAATGKADRIGFRIEDGKKVRFFKSNGETVSN
SIO_010081: VA249_RS01325
subclass of: SO_0000673
so part of: VA249_RS01325
location: 275899..276216
location: region:275899-276216:1
so has part: feature:275899-276216:1:exon

WP_096994896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275899-276216:1:exon

VA249_RS01330
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rplE
locus tag: VA249_RS01330
old locus tag: VYA_02520
so part of: sequence
location: 276240..276779
location: region:276240-276779:1
so has part: feature:276240-276779:1:exon
subclass of: SO_0000010

position:276240:1
position: 276240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276779:1
position: 276779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276240-276779:1:exon

VA249_RS01330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rplE
locus tag: VA249_RS01330
old locus tag: VYA_02520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L5
translation: MAKLHDYYKSSVVAELTKQFSYTSVMQVPRIEKITLNMGVGEAINDKKLLENAAADMATISGQKPLITKARKSVAGFKIREGYPIGCKVTLRGERMWDFLERLINIALPRVRDFRGVSAKSFDGRGNYSMGVREQIIFPEIDFDKVDRVRGLDITITTSAGTDEEGRALLAAFNFPFRK
SIO_010081: VA249_RS01330
subclass of: SO_0000673
so part of: VA249_RS01330
location: 276240..276779
location: region:276240-276779:1
so has part: feature:276240-276779:1:exon

WP_004745887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276240-276779:1:exon

VA249_RS01335
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rpsN
locus tag: VA249_RS01335
old locus tag: VYA_02530
so part of: sequence
location: 276797..277102
location: region:276797-277102:1
so has part: feature:276797-277102:1:exon
subclass of: SO_0000010

position:276797:1
position: 276797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277102:1
position: 277102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276797-277102:1:exon

VA249_RS01335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rpsN
locus tag: VA249_RS01335
old locus tag: VYA_02530
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312199.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S14
translation: MAKQSMKAREAKRAKLVAKFAEKRAALKAIISDVNASEEDRWNAVLSLQSLPRDSSASRQRNRCNQTGRPHGYLRKFGLSRIKVREACMKGEIPGLRKASW
SIO_010081: VA249_RS01335
subclass of: SO_0000673
so part of: VA249_RS01335
location: 276797..277102
location: region:276797-277102:1
so has part: feature:276797-277102:1:exon

WP_211915504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276797-277102:1:exon

VA249_RS01340
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rpsH
locus tag: VA249_RS01340
old locus tag: VYA_02540
so part of: sequence
location: 277132..277524
location: region:277132-277524:1
so has part: feature:277132-277524:1:exon
subclass of: SO_0000010

position:277132:1
position: 277132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277524:1
position: 277524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277132-277524:1:exon

VA249_RS01340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rpsH
locus tag: VA249_RS01340
old locus tag: VYA_02540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S8
translation: MSMQDPISDMLTRVRNGQAANKVAVKMPSSKLKVAIAALLKAEGYIVDFAVEGEAKPELEVTLKYFQAKPVIEQLKRVSRPGLRVYKKKDQLPSVMGGLGIAIVSTSKGLMSDRAARKAGLGGEIIAYVA
SIO_010081: VA249_RS01340
subclass of: SO_0000673
so part of: VA249_RS01340
location: 277132..277524
location: region:277132-277524:1
so has part: feature:277132-277524:1:exon

WP_128811822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277132-277524:1:exon

VA249_RS01345
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rplF
locus tag: VA249_RS01345
old locus tag: VYA_02550
so part of: sequence
location: 277538..278071
location: region:277538-278071:1
so has part: feature:277538-278071:1:exon
subclass of: SO_0000010

position:277538:1
position: 277538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278071:1
position: 278071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277538-278071:1:exon

VA249_RS01345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rplF
locus tag: VA249_RS01345
old locus tag: VYA_02550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L6
translation: MSRVAKAPVAIPAGVEVKLNGQEITVKGAKGELTRVLNDAVVIAQEDNNLTFGPKEGVVNAWAQAGTARALVNNMVVGVTEGFTKKLTLKGVGYRAAIKGNAVGLTLGFSHPVEHELPAGIKAECPSQTEIVITGCDKQLVGQVAADIRSYRQPEPYKGKGVRYADENVRTKEAKKK
SIO_010081: VA249_RS01345
subclass of: SO_0000673
so part of: VA249_RS01345
location: 277538..278071
location: region:277538-278071:1
so has part: feature:277538-278071:1:exon

WP_211915503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277538-278071:1:exon

VA249_RS01350
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rplR
locus tag: VA249_RS01350
old locus tag: VYA_02560
so part of: sequence
location: 278081..278434
location: region:278081-278434:1
so has part: feature:278081-278434:1:exon
subclass of: SO_0000010

position:278081:1
position: 278081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278434:1
position: 278434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278081-278434:1:exon

VA249_RS01350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rplR
locus tag: VA249_RS01350
old locus tag: VYA_02560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L18
translation: MDKKASRIRRATRARRKIAELGATRLVVHRTPRHVYAQVIAANGSEVIAAASTVEKAIREQVKYTGNIDAAKAVGKAVAERALEKGVTAVAFDRSGFQYHGRVAALAESAREAGLKF
SIO_010081: VA249_RS01350
subclass of: SO_0000673
so part of: VA249_RS01350
location: 278081..278434
location: region:278081-278434:1
so has part: feature:278081-278434:1:exon

WP_021451677.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278081-278434:1:exon

VA249_RS01355
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rpsE
locus tag: VA249_RS01355
old locus tag: VYA_02570
so part of: sequence
location: 278449..278952
location: region:278449-278952:1
so has part: feature:278449-278952:1:exon
subclass of: SO_0000010

position:278449:1
position: 278449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278952:1
position: 278952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278449-278952:1:exon

VA249_RS01355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rpsE
locus tag: VA249_RS01355
old locus tag: VYA_02570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004736754.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S5
translation: MAKEQQVQANDLQEKLIAVNRVSKTVKGGRIMSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKARRNMTTIALNEGTLHHPVKGRHSGSKVYMQPAAEGTGVIAGGAMRAVLEVAGVHNVLSKAYGSTNPINIVRATIDALGSVKSPEMVAAKRGLTVEAISE
SIO_010081: VA249_RS01355
subclass of: SO_0000673
so part of: VA249_RS01355
location: 278449..278952
location: region:278449-278952:1
so has part: feature:278449-278952:1:exon

WP_021708925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278449-278952:1:exon

VA249_RS01360
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rpmD
locus tag: VA249_RS01360
old locus tag: VYA_02580
so part of: sequence
location: 278960..279136
location: region:278960-279136:1
so has part: feature:278960-279136:1:exon
subclass of: SO_0000010

position:278960:1
position: 278960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279136:1
position: 279136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278960-279136:1:exon

VA249_RS01360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rpmD
locus tag: VA249_RS01360
old locus tag: VYA_02580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L30
translation: MATIKVTQTKSSIGRLPKHKATLRGLGLRKINHTVELEDTPCVRGMINKVYYMVKVEE
SIO_010081: VA249_RS01360
subclass of: SO_0000673
so part of: VA249_RS01360
location: 278960..279136
location: region:278960-279136:1
so has part: feature:278960-279136:1:exon

WP_000201159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278960-279136:1:exon

VA249_RS01365
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rplO
locus tag: VA249_RS01365
old locus tag: VYA_02590
so part of: sequence
location: 279142..279576
location: region:279142-279576:1
so has part: feature:279142-279576:1:exon
subclass of: SO_0000010

position:279142:1
position: 279142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279576:1
position: 279576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279142-279576:1:exon

VA249_RS01365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rplO
locus tag: VA249_RS01365
old locus tag: VYA_02590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017026376.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L15
translation: MRLNTLAPAAGSKHAPKRLGRGIGSGLGKTGGRGHKGQKSRSGGKVRPGFEGGQMPLKQRLPKFGFTSRKSLVSAEVRLGELAKVSGDVVDLNSLKAANIITKNIEFVKVVLSGEIDKAVTVKGLRVTKGAKAAIEAAGGKIEA
SIO_010081: VA249_RS01365
subclass of: SO_0000673
so part of: VA249_RS01365
location: 279142..279576
location: region:279142-279576:1
so has part: feature:279142-279576:1:exon

WP_128811818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279142-279576:1:exon

VA249_RS01370
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: secY
locus tag: VA249_RS01370
old locus tag: VYA_02600
so part of: sequence
location: 279597..280931
location: region:279597-280931:1
so has part: feature:279597-280931:1:exon
subclass of: SO_0000010

position:279597:1
position: 279597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280931:1
position: 280931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279597-280931:1:exon

VA249_RS01370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: secY
locus tag: VA249_RS01370
old locus tag: VYA_02600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecY
translation: MAKKPGQDFRSAQSGLSELKSRLLFVICALLVFRAGSFVPIPGIDAAVLADLFEQQKGTIVEMFNMFSGGALERASILALGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISQYTRYGTLVLATFQAIGIATGLPSMVDNLVVINQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGLPSAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFAAQSSHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSAFGWLTDVSLALSPGQPLYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLAGALYITFICLIPEFMMVAWNVRFYFGGTSLLIVVVVIMDFMAQVQTHLMSQQYDSVLKKANLKGYGR
SIO_010081: VA249_RS01370
subclass of: SO_0000673
so part of: VA249_RS01370
location: 279597..280931
location: region:279597-280931:1
so has part: feature:279597-280931:1:exon

WP_211915502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279597-280931:1:exon

VA249_RS01375
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rpmJ
locus tag: VA249_RS01375
so part of: sequence
location: 280970..281086
location: region:280970-281086:1
so has part: feature:280970-281086:1:exon
subclass of: SO_0000010

position:280970:1
position: 280970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281086:1
position: 281086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280970-281086:1:exon

VA249_RS01375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rpmJ
locus tag: VA249_RS01375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L36
translation: MKVRASVKKICRNCKVIKRNGVVRVICSSEPKHKQRQG
SIO_010081: VA249_RS01375
subclass of: SO_0000673
so part of: VA249_RS01375
location: 280970..281086
location: region:280970-281086:1
so has part: feature:280970-281086:1:exon

WP_042478686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280970-281086:1:exon

VA249_RS01380
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rpsM
locus tag: VA249_RS01380
old locus tag: VYA_02610
so part of: sequence
location: 281236..281592
location: region:281236-281592:1
so has part: feature:281236-281592:1:exon
subclass of: SO_0000010

position:281236:1
position: 281236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281592:1
position: 281592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281236-281592:1:exon

VA249_RS01380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rpsM
locus tag: VA249_RS01380
old locus tag: VYA_02610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S13
translation: MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAEVGIAEDVKISELTEEQIDQLRDGVAKYTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPIKK
SIO_010081: VA249_RS01380
subclass of: SO_0000673
so part of: VA249_RS01380
location: 281236..281592
location: region:281236-281592:1
so has part: feature:281236-281592:1:exon

WP_005450559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281236-281592:1:exon

VA249_RS01385
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rpsK
locus tag: VA249_RS01385
old locus tag: VYA_02620
so part of: sequence
location: 281611..282000
location: region:281611-282000:1
so has part: feature:281611-282000:1:exon
subclass of: SO_0000010

position:281611:1
position: 281611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282000:1
position: 282000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281611-282000:1:exon

VA249_RS01385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rpsK
locus tag: VA249_RS01385
old locus tag: VYA_02620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S11
translation: MAKQPTRTRKRVRKQVADGVAHIHASFNNTIVTITDRQGNALAWATAGGSGFRGSRKSTPFAAQVAAERCAEMAKEYGLKNLEVMVKGPGPGRESTVRALNAAGFRITNIVDATPIPHNGCRPPKKRRV
SIO_010081: VA249_RS01385
subclass of: SO_0000673
so part of: VA249_RS01385
location: 281611..282000
location: region:281611-282000:1
so has part: feature:281611-282000:1:exon

WP_128811815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281611-282000:1:exon

VA249_RS01390
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rpsD
locus tag: VA249_RS01390
old locus tag: VYA_02630
so part of: sequence
location: 282028..282648
location: region:282028-282648:1
so has part: feature:282028-282648:1:exon
subclass of: SO_0000010

position:282028:1
position: 282028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282648:1
position: 282648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282028-282648:1:exon

VA249_RS01390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rpsD
locus tag: VA249_RS01390
old locus tag: VYA_02630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1
GO component: GO:0015935 - small ribosomal subunit [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S4
translation: MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEYGVQLREKQKVRRMYGVLEKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLVSHKAILVNGKVVNVPSFKVAANDVVSIREKAKQQSRIKAALEVAEQREKPTWIEVDGGKMEGTFKRMPERSDLSADINEQLIVELYSK
SIO_010081: VA249_RS01390
subclass of: SO_0000673
so part of: VA249_RS01390
location: 282028..282648
location: region:282028-282648:1
so has part: feature:282028-282648:1:exon

WP_014230671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282028-282648:1:exon

VA249_RS01395
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rpoA
locus tag: VA249_RS01395
old locus tag: VYA_02640
so part of: sequence
location: 282672..283664
location: region:282672-283664:1
so has part: feature:282672-283664:1:exon
subclass of: SO_0000010

position:282672:1
position: 282672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283664:1
position: 283664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282672-283664:1:exon

VA249_RS01395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rpoA
locus tag: VA249_RS01395
old locus tag: VYA_02640
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit alpha
translation: MQGSVTEFLKPRLVDIEQISSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEIEGVLHEYSTKEGVQEDILEILLNLKGLAVRVAEGKDEVFITLNKSGSGPVVAGDITHDGDVEIANPEHVICHLTDDNAEIAMRIKVERGRGYVPASARIHTEEDERPIGRLLVDATYSPVDKIAYAVEAARVEQRTDLDKLVIDMETNGTLEPEEAIRRAATILAEQLDAFVDLRDVRVPEEKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASIAED
SIO_010081: VA249_RS01395
subclass of: SO_0000673
so part of: VA249_RS01395
location: 282672..283664
location: region:282672-283664:1
so has part: feature:282672-283664:1:exon

WP_010445384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282672-283664:1:exon

VA249_RS01400
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rplQ
locus tag: VA249_RS01400
old locus tag: VYA_02650
so part of: sequence
location: 283691..284071
location: region:283691-284071:1
so has part: feature:283691-284071:1:exon
subclass of: SO_0000010

position:283691:1
position: 283691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284071:1
position: 284071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283691-284071:1:exon

VA249_RS01400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rplQ
locus tag: VA249_RS01400
old locus tag: VYA_02650
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229143.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L17
translation: MRHRKSGRQLNRNSSHRKAMFSNMASSLVRHEVIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEVVAKLFNELGPRFAARQGGYTRILKAGFRAGDKAPMAYIELVDRPAAEEAAE
SIO_010081: VA249_RS01400
subclass of: SO_0000673
so part of: VA249_RS01400
location: 283691..284071
location: region:283691-284071:1
so has part: feature:283691-284071:1:exon

WP_005383141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283691-284071:1:exon

VA249_RS01405
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01405
old locus tag: VYA_02660
so part of: sequence
location: complement(284334..284813)
location: region:284334-284813:-1
so has part: feature:284334-284813:-1:exon
subclass of: SO_0000010

position:284334:-1
position: 284334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284813:-1
position: 284813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284334-284813:-1:exon

VA249_RS01405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01405
old locus tag: VYA_02660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005392373.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2780 domain-containing protein
translation: MRNTLISLTLLSIGIGNAHAFLDKVTENESANGLMDMVSQGLNSESSPITELLTSQLPVSTEQAAGGASALLALAQSHLSETNSSELNSLIPGLSSLGGAQDMLGGIENFSAVQSTFDKLGLNPSMISQFAPVILSYLEGQGASDGLMSSLTGLWDTSK
SIO_010081: VA249_RS01405
subclass of: SO_0000673
so part of: VA249_RS01405
location: complement(284334..284813)
location: region:284334-284813:-1
so has part: feature:284334-284813:-1:exon

WP_221069774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284334-284813:-1:exon

VA249_RS01410
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01410
old locus tag: VYA_02670
so part of: sequence
location: complement(284928..285548)
location: region:284928-285548:-1
so has part: feature:284928-285548:-1:exon
subclass of: SO_0000010

position:284928:-1
position: 284928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285548:-1
position: 285548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284928-285548:-1:exon

VA249_RS01410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01410
old locus tag: VYA_02670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019282418.1
GO function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FKBP-type peptidyl-prolyl cis-trans isomerase
translation: MSEIKFETAEQKASYGIGLQMGQQLAGSGLEGLSVDAIAAGIATALTGDMPSIEIDEINKALQELHTRAEAARQEAAKAAAADGEVFLKDNALRPEVNVLESGLQYEIITEGTGEIPTSDKSVRVHYHGELTDGTVFDSSVSRGQPAEFPVTGVIKGWVEALQLMPVGSKWKLYIPQDLAYGERGAGAAIPPFAALVFEVELLDIL
SIO_010081: VA249_RS01410
subclass of: SO_0000673
so part of: VA249_RS01410
location: complement(284928..285548)
location: region:284928-285548:-1
so has part: feature:284928-285548:-1:exon

WP_211915499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284928-285548:-1:exon

VA249_RS01415
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01415
old locus tag: VYA_02680
so part of: sequence
location: 285781..286374
location: region:285781-286374:1
so has part: feature:285781-286374:1:exon
subclass of: SO_0000010

position:285781:1
position: 285781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286374:1
position: 286374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285781-286374:1:exon

VA249_RS01415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01415
old locus tag: VYA_02680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020196522.1
GO function: GO:0042834 - peptidoglycan binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysM-like peptidoglycan-binding domain-containing protein
translation: MNRRRKKKQQVDHVGLMKQKLAAIDWKQPFDKEKWQKNLSPIAQFWQGLPKLHQRALMVLVPVVLLLLVVPAPKEMSSTSVTPVETQRVTIQLNTQSLSDQSSAQVSQPQSESWKEYQIKNGDTLAQVFRNNQLSMADLNALVAIEGGDKPLSHIKQGQLIRFKLSDDGKLDMLQLEKNGNSVMFFRLSDGSFGRNK
SIO_010081: VA249_RS01415
subclass of: SO_0000673
so part of: VA249_RS01415
location: 285781..286374
location: region:285781-286374:1
so has part: feature:285781-286374:1:exon

WP_221068562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285781-286374:1:exon

VA249_RS01420
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01420
old locus tag: VYA_02690
so part of: sequence
location: complement(286459..286929)
location: region:286459-286929:-1
so has part: feature:286459-286929:-1:exon
subclass of: SO_0000010

position:286459:-1
position: 286459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286929:-1
position: 286929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286459-286929:-1:exon

VA249_RS01420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01420
old locus tag: VYA_02690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020196524.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MINWTALPFSQLTTTQLYEMLRLRVDVFVVEQTCPYPELDGKDVLEGVYHLLGYQDDELVASARLLPAGTTYDNVSIGRVVTKQSARGSGLGHELLEQALHHCQRLWADQTIDIGAQEHLMAFYASHGFEAISESYLEDGIPHVDMRRGIDMSRSQ
SIO_010081: VA249_RS01420
subclass of: SO_0000673
so part of: VA249_RS01420
location: complement(286459..286929)
location: region:286459-286929:-1
so has part: feature:286459-286929:-1:exon

WP_128811807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:286459-286929:-1:exon

VA249_RS01425
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: dbpA
locus tag: VA249_RS01425
old locus tag: VYA_02700
so part of: sequence
location: 287076..288455
location: region:287076-288455:1
so has part: feature:287076-288455:1:exon
subclass of: SO_0000010

position:287076:1
position: 287076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288455:1
position: 288455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287076-288455:1:exon

VA249_RS01425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: dbpA
locus tag: VA249_RS01425
old locus tag: VYA_02700
EC number: 3.6.4.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017190035.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003724 - RNA helicase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent RNA helicase DbpA
translation: MSKQTFDQVGLNPALLETLESLNYTHMTPIQALSLPAILNQRDVIGQGKTGSGKTAAFGLGVLSNLNVKRFRVQSLVLCPTRELADQVAKEIRTLGRGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLEKGRINLEELNTLVLDEADRMLEMGFQDALDAVIDAAPKQRQTLLFSATFPEKIEQIAQRIMQSPEMIKVESTHDTSSIAQYFYKVDGSEARDEALANLLLTHQPESAVVFCNTKKEVQNVADELHHKGFSVIDIHGDLEQRERDQALVQFANKSVSILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGLAFSFFGEKDGLRVARIEEYLDMDVMPATLPAKSNQQPYQSKMVTIQIDGGKKQKVRPGDILGCLTGKDGIPGSQVGKIHLFPMRAYVAVDKAAAKKALQTISNGKMKGRQFRARILK
SIO_010081: VA249_RS01425
subclass of: SO_0000673
so part of: VA249_RS01425
location: 287076..288455
location: region:287076-288455:1
so has part: feature:287076-288455:1:exon

WP_128811805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287076-288455:1:exon

VA249_RS01430
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01430
old locus tag: VYA_02710
so part of: sequence
location: complement(288550..289131)
location: region:288550-289131:-1
so has part: feature:288550-289131:-1:exon
subclass of: SO_0000010

position:288550:-1
position: 288550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289131:-1
position: 289131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288550-289131:-1:exon

VA249_RS01430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01430
old locus tag: VYA_02710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009843280.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Crp/Fnr family transcriptional regulator
translation: MHADLYSDLINHGFLESEANQLIEHGQQLELPTRHILNHQGEFSSHIYFVLEGLCHASYLTDKGKEFSKEFYWEKDWVIGFESLIKNGPAPYLLETLTPCNLYCLPIHVLHRWRQEKHPIYIKLLEAQLMHKENKERFMLLYSPEERYQLFCQHYPDLEQRITDNQIAAYLGITPISLCRIKSRLKNGLNSVS
SIO_010081: VA249_RS01430
subclass of: SO_0000673
so part of: VA249_RS01430
location: complement(288550..289131)
location: region:288550-289131:-1
so has part: feature:288550-289131:-1:exon

WP_221068563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:288550-289131:-1:exon

VA249_RS01435
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: cpdB
locus tag: VA249_RS01435
old locus tag: VYA_02720
so part of: sequence
location: complement(289228..291189)
location: region:289228-291189:-1
so has part: feature:289228-291189:-1:exon
subclass of: SO_0000010

position:289228:-1
position: 289228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291189:-1
position: 291189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289228-291189:-1:exon

VA249_RS01435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: cpdB
locus tag: VA249_RS01435
old locus tag: VYA_02720
EC number: 3.1.4.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005489602.1
GO component: GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0008663 - 2',3'-cyclic-nucleotide 2'-phosphodiesterase activity [Evidence IEA]
GO process: GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2',3'-cyclic-nucleotide 2'-phosphodiesterase
translation: MKIAVNPVSVAVLTGMLTLAGPAMADTIKLRIIETTDIHTNVMDYDYYKDQPSKQIGLSRAATLVKQAREEVENSVLVDNGDLIQGSPMGDYMAAKGIKAGETHPVYKAMNQLGYDVGNIGNHEFNYGLDFLKKSIDGANFPYISANVFDKETGEHYFKPYLIKTHTFKDTDGQDHEINVGYIGFVPPQIMVWDKNNLEGKVFAKDITETAKALIPQMKKEGADVIVAIPHSGVSTDPYKLGAENSVYYLTKVEGIDAIAFGHSHAVFPGKGFDNLQGVDNEKGTINGVTAVMPGRWGSHVGVMDLLLEEKDGKWQVTDGQADARPIFDNVNKKSLAEADKGIVKALEDDHKGTREFVNQPIGQANDVMYSFLALVQDDPTIQIVNLAQKDYVERFIQGDPDLADIPVLSAAAPFKVGGRKDDPSGFTEVESGQLTFRNAADLYLYPNTLVAMKVKGKEVHEWLECSAGQFNHIDVNSTKPQSLINWDSFRTYNFDVIDGVHYQIDVTQPPKYDADCKVINPESQRIVNLTFNGKPIDPKQDFIIATNNYRAYSNTFPGTGPDFIAFDSPDENRSVVAAYISRISEEKGEVTPSADNNWSFAPIKSDNKLDVRFETSPSDKAAQFIKEKGQYPMKRVATDDIGFAIYQIELNK
SIO_010081: VA249_RS01435
subclass of: SO_0000673
so part of: VA249_RS01435
location: complement(289228..291189)
location: region:289228-291189:-1
so has part: feature:289228-291189:-1:exon

WP_221068564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:289228-291189:-1:exon

VA249_RS01440
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: cobA
locus tag: VA249_RS01440
old locus tag: VYA_02730
so part of: sequence
location: 291484..292356
location: region:291484-292356:1
so has part: feature:291484-292356:1:exon
subclass of: SO_0000010

position:291484:1
position: 291484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292356:1
position: 292356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291484-292356:1:exon

VA249_RS01440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: cobA
locus tag: VA249_RS01440
old locus tag: VYA_02730
EC number: 2.1.1.107
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017633443.1
GO function: GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO process: GO:0019354 - siroheme biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uroporphyrinogen-III C-methyltransferase
translation: MAVDNSVTTLPRQKPRLVASNQASDAPRFRRQSLKPGEVALVGAGPGDPELLTIKALNCLQQADVVLYDYLVSDEIMALIPSDTILVCVGKRAGHHSVPQEKTNQLLVDFAKQGYRVVRIKGGDPFVFGRGGEELEVLADSGIRFQVVPGITAAAGATAYAGIPLTHRDYAQSALFVTGHLKEDCDDMDWSTLARGNQTLVIYMGLMKSQYIQQQLIQYGRASTTPIAIIERGTQIQQKVFSGTLSQLSELSKQAQAPSLIVVGEVVRLSQKLDWFLPDTESKQSALVNS
SIO_010081: VA249_RS01440
subclass of: SO_0000673
so part of: VA249_RS01440
location: 291484..292356
location: region:291484-292356:1
so has part: feature:291484-292356:1:exon

WP_221068565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291484-292356:1:exon

VA249_RS01445
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: cysD
locus tag: VA249_RS01445
old locus tag: VYA_02740
so part of: sequence
location: 292496..293404
location: region:292496-293404:1
so has part: feature:292496-293404:1:exon
subclass of: SO_0000010

position:292496:1
position: 292496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293404:1
position: 293404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292496-293404:1:exon

VA249_RS01445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: cysD
locus tag: VA249_RS01445
old locus tag: VYA_02740
EC number: 2.7.7.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004738750.1
GO function: GO:0004781 - sulfate adenylyltransferase (ATP) activity [Evidence IEA]
GO process: GO:0019419 - sulfate reduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfate adenylyltransferase subunit CysD
translation: MDQQRLTHLQQLEAESIHIIREVAAEFDNPVMMYSIGKDSSVMLHLARKAFYPGKIPFPLLHVDTDWKFREMIEFRDRTAEKYGFELLVHKNPEGLAMGCSPFVHGSSKHTDIMKTQGLKQALNKYGFDAAFGGARRDEEKSRAKERVYSFRDKNHTWDPKNQRPELWKTYNGQVNKGESIRVFPLSNWTELDIWQYIYLENIEIVPLYLADKRPVVERDGMLIMVDDDRMKLEPGEVIEQKSVRFRTLGCYPLTGAIESEANTLTGIIEEMLVATSSERQGRAIDHDQSGSMELKKRQGYF
SIO_010081: VA249_RS01445
subclass of: SO_0000673
so part of: VA249_RS01445
location: 292496..293404
location: region:292496-293404:1
so has part: feature:292496-293404:1:exon

WP_128811799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292496-293404:1:exon

VA249_RS01450
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: cysN
locus tag: VA249_RS01450
old locus tag: VYA_02750
so part of: sequence
location: 293423..294853
location: region:293423-294853:1
so has part: feature:293423-294853:1:exon
subclass of: SO_0000010

position:293423:1
position: 293423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294853:1
position: 294853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293423-294853:1:exon

VA249_RS01450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: cysN
locus tag: VA249_RS01450
old locus tag: VYA_02750
EC number: 2.7.7.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005528550.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
GO process: GO:0006790 - sulfur compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfate adenylyltransferase subunit CysN
translation: MNSAVEAQLAELGIEGYLTQHQYKSLLRFLTCGSVDDGKSTLIGRLLHDSKQIYEDQLAAVHSDSQRVGTTGEKPDLALLVDGLQAEREQGITIDVAYRYFSTQKRKFIIADTPGHEQYTRNMATGASTCDLAVILVDARKGVLDQTRRHSFISNLLGLKHFIVAINKMDLVDYSQQRFEDIRDEYLQFSENLAGETDIQIIPLSALEGDNVVEKGQNLSWFEGPSLLELLETVDVDQEKGQGDFRFPVQYVNRPNLDFRGFSGTVSSGSVKVGDAIKALPSGKTSTVARIVTFDGDVQEAQAGLAVTLTLNDEIDISRGDLLVLENAQVESTNHLLADVVWMTEQPLQPGRDYDIKIAGKKTVGHVEAIRHQYDINNLSTHGAAELPLNGIGLCEWSLTESVALDNYQACADTGGFIIIDRLTNVTVGAGMVKESLAAVERGLTDVSAFELELNALVRKHFPHWEAKDLNQLLKK
SIO_010081: VA249_RS01450
subclass of: SO_0000673
so part of: VA249_RS01450
location: 293423..294853
location: region:293423-294853:1
so has part: feature:293423-294853:1:exon

WP_221068566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293423-294853:1:exon

VA249_RS01455
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01455
old locus tag: VYA_02760
so part of: sequence
location: 295025..296749
location: region:295025-296749:1
so has part: feature:295025-296749:1:exon
subclass of: SO_0000010

position:295025:1
position: 295025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296749:1
position: 296749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295025-296749:1:exon

VA249_RS01455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01455
old locus tag: VYA_02760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004410374.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SLC13 family permease
translation: MWEQGFVLAILLGIITCLLVTKLKPSYVFAGAAFIAFMAGLIELNTIATNFTNASLLTLVLLILASSALEKTLLISWVSRSISEGNLGSVIAKLGFSTALLSSFTNNTAVVVSLIGAIKRNQQHAPSKLLIPLSYAAIFGGTLTLIGTSTNLIINSFVEDAGLPSLTFFTPTMIGLAVLVGGILILVPLSYLLPNYDDQSQEELPYFLEARVEPGSPLVGRTVSENNLRALRKLFLAEVIRDGVTEPSVGPDFILKAKDRLLFCGDVESVATLQEISGLTLFGHQHLNGQNFLEVVVSSSASFCHRTLKESRFRDRFDAVVVAIRRGHERLEGGLGNITLAAGDTLILVPGKRFEAERRMHRKEFVVVHDLDSSARLDANKSALVLVGFASVIGCALLDIFPLIKGLLAYIIALLAFGIVQISELRRRFPIDIVVIVGSALSIAQLMLSSGLSLKMGDMFIEAFNGWGVFGALIATYIMTLVLTELVTNNAAAALAFPIGYSMAVGYGVDPMPFIMAVLFGASASFISPYGYQTNLLVYSVGNYKLTDYVRIGVPISIVYSVLVLTLIPVFFPF
SIO_010081: VA249_RS01455
subclass of: SO_0000673
so part of: VA249_RS01455
location: 295025..296749
location: region:295025-296749:1
so has part: feature:295025-296749:1:exon

WP_128811795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295025-296749:1:exon

VA249_RS01460
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: cysC
locus tag: VA249_RS01460
old locus tag: VYA_02770
so part of: sequence
location: 296774..297391
location: region:296774-297391:1
so has part: feature:296774-297391:1:exon
subclass of: SO_0000010

position:296774:1
position: 296774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297391:1
position: 297391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296774-297391:1:exon

VA249_RS01460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: cysC
locus tag: VA249_RS01460
old locus tag: VYA_02770
EC number: 2.7.1.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005430514.1
GO function: GO:0004020 - adenylylsulfate kinase activity [Evidence IEA]
GO process: GO:0006790 - sulfur compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenylyl-sulfate kinase
translation: MTAETPVKDENIVWHQHSVDKQFRAGLKQQKPAVLWFTGLSGAGKSTVAGALENRLADLGYHTYLLDGDNVRHGLCSDLGFSEQDRRENIRRIGELAKLMADAGLIVLSAFISPHREERQLVRDLLPQDEFIEVYVNASLEVCEKRDPKGLYKKARAGEIANFTGIDSEYQAPVNPEIDLPAGEKNVEELVALCLIELKQRGVIR
SIO_010081: VA249_RS01460
subclass of: SO_0000673
so part of: VA249_RS01460
location: 296774..297391
location: region:296774-297391:1
so has part: feature:296774-297391:1:exon

WP_128811793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296774-297391:1:exon

VA249_RS01465
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01465
old locus tag: VYA_02780
so part of: sequence
location: complement(297482..298387)
location: region:297482-298387:-1
so has part: feature:297482-298387:-1:exon
subclass of: SO_0000010

position:297482:-1
position: 297482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298387:-1
position: 298387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297482-298387:-1:exon

VA249_RS01465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01465
old locus tag: VYA_02780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020196530.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR03899 family protein
translation: MAEATKPPVIIEHEANTQKKSHHEKKASYIKDSASRVQSIAQIHGLDALLQSDPPAKSALERAQLREERRQEQRQKNLEHILKLAHSSCRDETAGEPDQDWLYRFFDMAQDIHNSSMQKLWAQVMKREVTNPGSTSMKALKALKDMSPKEAQTLQRAASLACSFGGDNSRKLLIGYKAHGGIFSFGKRDMTSNLNMGSFQLPYSSLLVLIELGLLHSTELESGEIGIETPLMLTYQGKNLSLQVNTKGVRLLYYRFTPTGNELCKLLGNKPNSQYYDQILALLNQKFMVHSEAKTTVNHTV
SIO_010081: VA249_RS01465
subclass of: SO_0000673
so part of: VA249_RS01465
location: complement(297482..298387)
location: region:297482-298387:-1
so has part: feature:297482-298387:-1:exon

WP_128811791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297482-298387:-1:exon

VA249_RS01470
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01470
old locus tag: VYA_02790
so part of: sequence
location: complement(298824..299318)
location: region:298824-299318:-1
so has part: feature:298824-299318:-1:exon
subclass of: SO_0000010

position:298824:-1
position: 298824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299318:-1
position: 299318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298824-299318:-1:exon

VA249_RS01470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01470
old locus tag: VYA_02790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020196531.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3299 domain-containing protein
translation: MFKKILCRVLLLLSFATPVLANEEPLTLDWIDLVPEAERNMFDSMGMPETDHSGNAAQQSKVGSVRPELNGSTVKIPGFVIPLEGDANTITEFLLVPYFGACIHVPPPPPNQIIYVKFPKGAPIQELWDVVYVIGRLKTDTMNHELAETGYLIDGTAIEAYDDM
SIO_010081: VA249_RS01470
subclass of: SO_0000673
so part of: VA249_RS01470
location: complement(298824..299318)
location: region:298824-299318:-1
so has part: feature:298824-299318:-1:exon

WP_128811789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298824-299318:-1:exon

VA249_RS01475
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01475
old locus tag: VYA_02800
so part of: sequence
location: complement(299321..300580)
location: region:299321-300580:-1
so has part: feature:299321-300580:-1:exon
subclass of: SO_0000010

position:299321:-1
position: 299321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300580:-1
position: 300580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299321-300580:-1:exon

VA249_RS01475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01475
old locus tag: VYA_02800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017820287.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MSAVVKLAWKSLMNRKATAILTIMTVAISVVLLLGVERIRTQAKDSFANTISGTDLIVGGRSGQVNLLLYSVFRIGNATNNIDWKSYQEFANHRAVDWAIPISLGDSHKGFRVMGTNHSYFEHYKYGSKQSLTLSQGKEFNGLFETVLGSDVAKQLGYEIGSEIIIAHGISDVGFSRHDNLPFKVVGILAPTGTPVDKTVHVSLEAIEAIHVGWESGARLGPTLNAKTLAARDFQPKQITAMLVGLKSRIQTFALQRQINTYPKEPLSAIMPGVALHELWGMMSVAEQALMAVSGFVVVAGLLGMLSSLLTSLQERRREMAILRAMGARPRHVFSLLISEASLLTLAGILVGVAGLYAILALLQPLIQQHYGIHLSLTSLSSYEWMLLSFVQCAGIIIGFIPAFRAYRQSLSDGMTIRI
SIO_010081: VA249_RS01475
subclass of: SO_0000673
so part of: VA249_RS01475
location: complement(299321..300580)
location: region:299321-300580:-1
so has part: feature:299321-300580:-1:exon

WP_221068567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299321-300580:-1:exon

VA249_RS01480
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01480
old locus tag: VYA_02810
so part of: sequence
location: complement(300577..301299)
location: region:300577-301299:-1
so has part: feature:300577-301299:-1:exon
subclass of: SO_0000010

position:300577:-1
position: 300577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301299:-1
position: 301299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300577-301299:-1:exon

VA249_RS01480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01480
old locus tag: VYA_02810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020196532.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MTENTSNVVELKNAQFVWPGSESATINIPQLHIAQGEHVFIKGPSGCGKSTLLALLTGINTLTSGSISVLNTDMASLKASQRDKFRADHIGYIFQQFNLLPYLNVIENVLIPCQFSRVRRNRVASNAASLEKQATTLLERLHLPKALHNKPVSELSIGQQQRVAAARALIGQPELVIADEPTSALDHDNRKAFIELLMEQAKLANATLVFVSHDPTLESLFDRTLNLPEINQAQTLGAAS
SIO_010081: VA249_RS01480
subclass of: SO_0000673
so part of: VA249_RS01480
location: complement(300577..301299)
location: region:300577-301299:-1
so has part: feature:300577-301299:-1:exon

WP_221068568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300577-301299:-1:exon

VA249_RS01485
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01485
old locus tag: VYA_02820
so part of: sequence
location: complement(301383..302114)
location: region:301383-302114:-1
so has part: feature:301383-302114:-1:exon
subclass of: SO_0000010

position:301383:-1
position: 301383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302114:-1
position: 302114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301383-302114:-1:exon

VA249_RS01485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01485
old locus tag: VYA_02820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005430523.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2796 domain-containing protein
translation: MPTKHALALVIGLSLAATANAEEYRQHEAHVHGHVEFNIAQDGKDLLIEITSPGADIVGFEHAPENAQQEQALKQAISTLKDADQLFAINRQAKCVIEDVHVSHTLGQDSHAGHDHNEHDHDDHKGHDHDKHDHDDHKGHDHDEHDHGDQKAHDHNKHDHDDHKGHDHDEHNHDDHEHHEHGGHGEFTVEYRYHCDSVSDLNRIDTTWFKQFPATEAISANLFTDTTQSATRLNKNNTKIDIK
SIO_010081: VA249_RS01485
subclass of: SO_0000673
so part of: VA249_RS01485
location: complement(301383..302114)
location: region:301383-302114:-1
so has part: feature:301383-302114:-1:exon

WP_221068569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:301383-302114:-1:exon

VA249_RS01490
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01490
so part of: sequence
location: complement(302209..302508)
location: region:302209-302508:-1
so has part: feature:302209-302508:-1:exon
subclass of: SO_0000010

position:302209:-1
position: 302209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302508:-1
position: 302508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302209-302508:-1:exon

VA249_RS01490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005430545.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2607 family protein
translation: MPHSWQATIHHWRRTFIVFSVALLIAWNFATLTHQLDLVPEHHSQHHCQLFFSAHHGVIHAFPDVMAITFIPVAIIATVEKYTHHMSVRYLARAPPILT
SIO_010081: VA249_RS01490
subclass of: SO_0000673
so part of: VA249_RS01490
location: complement(302209..302508)
location: region:302209-302508:-1
so has part: feature:302209-302508:-1:exon

WP_221068570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302209-302508:-1:exon

VA249_RS01495
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01495
old locus tag: VYA_02840
so part of: sequence
location: complement(302759..303310)
location: region:302759-303310:-1
so has part: feature:302759-303310:-1:exon
subclass of: SO_0000010

position:302759:-1
position: 302759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303310:-1
position: 303310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302759-303310:-1:exon

VA249_RS01495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01495
old locus tag: VYA_02840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005528563.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YtfJ family protein
translation: MKTKTLLSIFLAVAPGFAFANNLTLGKTVPTAKVDAYGEIVLQGEGVAYQPWATDQMLGKVRVIHAIAGRSSSKAMNAPLMTALTEAKFPEDAYQTTTIINQDDSIWGTGSFVKSSAQESKQEFPWSSMVLDESGIIASSWALQEESSAIVVQDKTGKILFVKEGALSQNEINQVLGLIKQNI
SIO_010081: VA249_RS01495
subclass of: SO_0000673
so part of: VA249_RS01495
location: complement(302759..303310)
location: region:302759-303310:-1
so has part: feature:302759-303310:-1:exon

WP_221068571.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302759-303310:-1:exon

VA249_RS01500
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01500
old locus tag: VYA_02850
so part of: sequence
location: 303524..303724
location: region:303524-303724:1
so has part: feature:303524-303724:1:exon
subclass of: SO_0000010

position:303524:1
position: 303524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303724:1
position: 303724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303524-303724:1:exon

VA249_RS01500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01500
old locus tag: VYA_02850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005450516.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1107 domain-containing protein
translation: MLREFAVYRPRQVARFVKTLFKGQFTIAGVGEFRFDNGKVLLPDVKNPKQLSVFREVNQAILSLPV
SIO_010081: VA249_RS01500
subclass of: SO_0000673
so part of: VA249_RS01500
location: 303524..303724
location: region:303524-303724:1
so has part: feature:303524-303724:1:exon

WP_211915482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303524-303724:1:exon

VA249_RS01505
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: msrA
locus tag: VA249_RS01505
old locus tag: VYA_02860
so part of: sequence
location: complement(303801..304439)
location: region:303801-304439:-1
so has part: feature:303801-304439:-1:exon
subclass of: SO_0000010

position:303801:-1
position: 303801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304439:-1
position: 304439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303801-304439:-1:exon

VA249_RS01505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: msrA
locus tag: VA249_RS01505
old locus tag: VYA_02860
EC number: 1.8.4.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013855952.1
GO function: GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO process: GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide-methionine (S)-S-oxide reductase MsrA
translation: MLNKQTMISIEDALPGRETAMHIDDVHFVNQASLSAQPQAHQSQILFGMGCFWGAERLFWQLDGVVSTSVGYAGGYTPNPTYEEVCSGKTGHTEVVRVAFDERVISLTQLLTVFWEKHDPTQGMRQGNDLGTQYRSAIYTYSQEQQDIAALSKARYQKALQEDLQTAITTEIKPAGPYYFAETYHQQYLAKNPNGYCGIGGTGVCFPPNLQD
SIO_010081: VA249_RS01505
subclass of: SO_0000673
so part of: VA249_RS01505
location: complement(303801..304439)
location: region:303801-304439:-1
so has part: feature:303801-304439:-1:exon

WP_221068572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303801-304439:-1:exon

VA249_RS01510
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01510
old locus tag: VYA_02870
so part of: sequence
location: 304607..306319
location: region:304607-306319:1
so has part: feature:304607-306319:1:exon
subclass of: SO_0000010

position:304607:1
position: 304607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306319:1
position: 306319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304607-306319:1:exon

VA249_RS01510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01510
old locus tag: VYA_02870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020196536.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: autotransporter assembly complex family protein
translation: MIRKAIPIIASLIVFSQSAYANVSLKVKGIDGALEDNVSAYLSSIPEEDYSTSLRFQARLDQSITEALNALGYYHAKISYSIPKDNDELIVNVNPGEPVRIKVMDVVISGEAKEDEEFIRLLEKSPLKVGKVLNQGEYDTLKSSIRNLALQRGYFNGDYTLSRLEVIPELNQANVRLHYESGIRYHFGSVEITGSQIWEDRVASLRPFKIGQPYLVSEVGEYNQNLSNTDWFSSVFVEPDLTKLDDGRDLPIKVSLAPAAKNQIETGIGYSTDTGVRGTLKWKKPWVSARGHSFDTALSLSKPEQTITAGYKIPLDDVLHEYYQLQFGLKHLDNRDTESLESNLAVERHWLTDGGWHKTLYVRHLYENFSQGLQDDGVQFVLPGASFSRTRTRGGNMPMWGDKQSVTVEYGDPALLSETRVLRLLGRTSWIRGIGENHRGLFRLEGGANITDELEKLSPSLRFFAGGDNNIRGYGYESISPKDASGALTGAKYILTSTLEYQYRVYGNWWGAAFYDIGDAFNKTPEWKSGAGVGIRWASPVGPVSFDFAWGLDAEPEPEFRIHFSLGPEL
SIO_010081: VA249_RS01510
subclass of: SO_0000673
so part of: VA249_RS01510
location: 304607..306319
location: region:304607-306319:1
so has part: feature:304607-306319:1:exon

WP_221068573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304607-306319:1:exon

VA249_RS01515
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01515
old locus tag: VYA_02880
so part of: sequence
location: 306319..310083
location: region:306319-310083:1
so has part: feature:306319-310083:1:exon
subclass of: SO_0000010

position:310083:1
position: 310083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306319-310083:1:exon

VA249_RS01515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01515
old locus tag: VYA_02880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017817247.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translocation/assembly module TamB domain-containing protein
translation: MIKMMLKWSKWFSLGLLSLLLLVTIFIATVLFTHPGLKLALWGAEKALPQLKVESIQGSLFPRFELKGVSFVDESLNIDANVERLELAINFRCLTDPKVCVDELALEGVNFQMPELPPSDAPVEETPPLRSVSTPVPIFINNVSFNDIKLNILGNHIDWQAFSTALSMQGDRLVIAPTALKTINVALAPSEDTPKADTASKPKAEPEPKDIVLPEVWIPLTVEAKRLDIHDFKLAGDTPIVVHHLGLEAKAGGDQVEVKTLELDMPEVEGQLSTQVTLSADYPIQAQIDALIKQADVKGQKLSLSASGSVGDLSIEATLSDLVKAKIDGQVQPLKSELPFDIHLKEVAAQWPLSGKSDYQVVVPNLTAKGSLNGYAVNLETKASGKDMPDVDVTLNGKGTLEQIDLDRLVVKTLGGELSGKVMANWAAPINWQADLNLKNIQPGLQWQEAEGDISGSLSTSGSLTEQGGWQVNLPKLDIDGILRGYPLNIEGQLEASDKNGKGEDLQLNTQGLALSHGPNKLRAKGKIDKQIMMDVEVNFPDFSKSVPDLSGKMNGAVALRGSLKQPDINVDLALNQLDWQQQAKVESITLKGDVMPLPAPKADVSLIATNIAYDDVVIDRADLELSGDEKLHQLTLDVVSDIVSSSLEIEGTFKQKPEMIWDGALRRLTLSTPQGPWTLQKSTSVKVNIDKQIADVQAHCWLQANSKVCLTENISVGKSGEAKLAITNFDFDQIQQFLPQETKLQGSLNANAFAKWAPNIKPEVTLDVELPKGHVEQALEQPIKVGWDSVNLQAKLAEDKLDAKWLLDVTDNGDLSGQVELNDVSSDSPTIDGKVLLSTFNLDFLAPLIGEYSLFKASMNTDLTLSGDVMHPKVNGQFLIDQMKLQGEVTPIDINSGKVAINFTGHQANLDAGIMTPDGKLEINGDADWRDLENWNTKARVFAKELKVDMPPMVRIKVEPDMTIDVTPKLAKVTGNINLPWGRIFIDELPPSAVGVSRDTVILNQDMQPVDGEPALPFNVETDINIKIGDEFQLSAFGLKGELQGNLNVTQKDKGPFIVGEVNIVDGSYRSFGQDLVIEEGKIMMNGPADQPYVSIKAIRNPDNTQDDVTAGVRVTGPASDPTVEIFSDPAMPQANALSYLLRGQDIDAESGGNAMTTTLIGLSLAKSGKVVGEIGEAFGVQDLQLDTAGSGDDSQVTVSGYILPGLQVKYGVGIFSSLGEFTVRYRLMKDLYVEAVSGVDSAVDLLYQFEFD
SIO_010081: VA249_RS01515
subclass of: SO_0000673
so part of: VA249_RS01515
location: 306319..310083
location: region:306319-310083:1
so has part: feature:306319-310083:1:exon

WP_221069777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:306319-310083:1:exon

VA249_RS01520
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01520
old locus tag: VYA_02890
so part of: sequence
location: 310112..310459
location: region:310112-310459:1
so has part: feature:310112-310459:1:exon
subclass of: SO_0000010

position:310112:1
position: 310112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310459:1
position: 310459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310112-310459:1:exon

VA249_RS01520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01520
old locus tag: VYA_02890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009843298.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: gamma-glutamylcyclotransferase
translation: MQHLVFVYGTLRSGESNHHYLSTAQFLGHHQTEPQFALYDLGPYPALSVGQKSIQGEVYLIDEETLIELDKLEDVPVEYHRETIVTPFGQAWIYLYQDAEQLSDEIASGDWCQRV
SIO_010081: VA249_RS01520
subclass of: SO_0000673
so part of: VA249_RS01520
location: 310112..310459
location: region:310112-310459:1
so has part: feature:310112-310459:1:exon

WP_211915479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310112-310459:1:exon

VA249_RS01525
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: ppa
locus tag: VA249_RS01525
old locus tag: VYA_02900
so part of: sequence
location: complement(310558..311088)
location: region:310558-311088:-1
so has part: feature:310558-311088:-1:exon
subclass of: SO_0000010

position:310558:-1
position: 310558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311088:-1
position: 311088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310558-311088:-1:exon

VA249_RS01525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: ppa
locus tag: VA249_RS01525
old locus tag: VYA_02900
EC number: 3.6.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005454643.1
GO function: GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]
GO process: GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inorganic diphosphatase
translation: MSLNNVPAGKSLPEDIYVVIEIPANADPIKYEVDKDTGAVFVDRFMSAPMFYPCNYGYVNDTLSLDGDPVDVLVPTPYPLMPGSVIRCRPVGVLKMTDESGEDAKVFAVPHSKISKEYEHIQDVGDIPELLKAQITQFFERYKELEAGKWVKVDGWADVEAAKAEIVESYERAQSK
SIO_010081: VA249_RS01525
subclass of: SO_0000673
so part of: VA249_RS01525
location: complement(310558..311088)
location: region:310558-311088:-1
so has part: feature:310558-311088:-1:exon

WP_221068574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310558-311088:-1:exon

VA249_RS01530
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: fbp
locus tag: VA249_RS01530
old locus tag: VYA_02910
so part of: sequence
location: complement(311213..312226)
location: region:311213-312226:-1
so has part: feature:311213-312226:-1:exon
subclass of: SO_0000010

position:311213:-1
position: 311213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312226:-1
position: 312226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311213-312226:-1:exon

VA249_RS01530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: fbp
locus tag: VA249_RS01530
old locus tag: VYA_02910
EC number: 3.1.3.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020335825.1
GO function: GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class 1 fructose-bisphosphatase
translation: MSGMRTLGEFIVEKQADFPHASGDLSSLLASIRLAAKIVNREINAAGLGDITGAVGTENIQGEAQQKLDVYANEKFKAALEARDQVCGVASEEEDEAVAFNRELNQNAKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVSPIGSPATEEDFLQPGNKQVAAGYVIYGSSTMLVYTTGNGVNGFTYDPSIGSFCLSHENMMIPEDGKIYSINEGNYVRFPVGVKKYIKYCQENVPEDGRPYTSRYIGSLVADFHRNLLKGGIYLYPSTLSHPQGKLRLLYECNPMAFLIEQAGGLASDGVNRIMDLEPTELHQRVPFFVGSKNMVNKVESFLELHRDE
SIO_010081: VA249_RS01530
subclass of: SO_0000673
so part of: VA249_RS01530
location: complement(311213..312226)
location: region:311213-312226:-1
so has part: feature:311213-312226:-1:exon

WP_221068575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:311213-312226:-1:exon

VA249_RS01535
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: mpl
locus tag: VA249_RS01535
old locus tag: VYA_02920
so part of: sequence
location: 312538..313896
location: region:312538-313896:1
so has part: feature:312538-313896:1:exon
subclass of: SO_0000010

position:312538:1
position: 312538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313896:1
position: 313896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312538-313896:1:exon

VA249_RS01535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: mpl
locus tag: VA249_RS01535
old locus tag: VYA_02920
EC number: 6.3.2.45
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017820280.1
GO function: GO:0016881 - acid-amino acid ligase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
translation: MHIHILGICGTFMGGAAILARQLGHKVTGSDANVYPPMSTLLESQGIEIIEGFDPSQLDPQPDLVVIGNAMSRGNPCVEHVLNTNMRYTSGPQWLQEFLLHDRWVLAVSGTHGKTTTSSMLAWILEDCGYQPGFLVGGVLGNFGLSARLGESMFFVVEADEYDSAFFDKRSKFVHYHPRTLIMNNLEFDHADIFDDLEAIKRQFHHLVRTVPGNGLILAPKQDQALQDVIERGCWTEKQYSGENGDWQAHKLVLDGSKFEVSLLGEKVGVVDWDLVGDHNVDNALMAIAAARHVGVAPELACQALGRFINTKRRLELKGEEKGVTVYDDFAHHPTAIELTLGGLRNKVGKKRILAVLEPRSATMKRGVHKDTLAASLHDADEVFLFQPDSIEWSVNDIAEQCQQPAFVDADMDSFVKKIVERAQPGDQILVMSNGGFGGIHGKLLEQLKQQA
SIO_010081: VA249_RS01535
subclass of: SO_0000673
so part of: VA249_RS01535
location: 312538..313896
location: region:312538-313896:1
so has part: feature:312538-313896:1:exon

WP_221068576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312538-313896:1:exon

VA249_RS01540
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01540
old locus tag: VYA_02930
so part of: sequence
location: 313906..314538
location: region:313906-314538:1
so has part: feature:313906-314538:1:exon
subclass of: SO_0000010

position:313906:1
position: 313906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314538:1
position: 314538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313906-314538:1:exon

VA249_RS01540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01540
old locus tag: VYA_02930
EC number: 2.5.1.129
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014230700.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flavin prenyltransferase UbiX
translation: MQQNQQRNKAITLALTGASGAPYGLRLLECLVAADYHVYVLISSAARVVMATEHGLKLPSGPEAAQKALVEHLNCNSDNVTVCGKDDWFSPVASGSAAPKQMVVCPCSAGSVAAIAHGMSDNLIERAADVVMKERGQLLLVVRETPFSTLHLENMHKLSQMGVTIMPAAPGFYHQPKSIEDLVDFMVARILDHLGIEQGLVPRWGYDQRS
SIO_010081: VA249_RS01540
subclass of: SO_0000673
so part of: VA249_RS01540
location: 313906..314538
location: region:313906-314538:1
so has part: feature:313906-314538:1:exon

WP_221068577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313906-314538:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 1074311
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00059
inference: COORDINATES: profile:INFERNAL:1.1.4
note: TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: thiamine pyrophosphate
so part of: sequence
location: 314576..314724
location: region:314576-314724:1
so has part: feature:314576-314724:1:region

position:314576:1
position: 314576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314724:1
position: 314724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314576-314724:1:region

VA249_RS01545
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: thiB
locus tag: VA249_RS01545
old locus tag: VYA_02940
so part of: sequence
location: 314794..315786
location: region:314794-315786:1
so has part: feature:314794-315786:1:exon
subclass of: SO_0000010

position:314794:1
position: 314794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315786:1
position: 315786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314794-315786:1:exon

VA249_RS01545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: thiB
locus tag: VA249_RS01545
old locus tag: VYA_02940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005485357.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0048502 - ABC-type thiamine transporter activity [Evidence IEA]; GO:0030975 - thiamine binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO process: GO:0030974 - thiamine pyrophosphate transmembrane transport [Evidence IEA]; GO:0015888 - thiamine transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine ABC transporter substrate binding subunit
translation: MKATLSLITLTALTSTSALAAENTLTIYTYDSFAADWGPGPKVEQAFEAKCGCDVNFVALDDGVSILNRLRLEGSRTKADIVLGLDNNLVAEAKKTGLLVEHNVDTSNTTLPNGWNDKTFVPYDYGYFAFVYNKEKLTNPPKSMKELVEERDDIKVIYQDPRTSTPGQGLMLWMKSIYGDEATQAWKQLASKTVTVTKGWSEAYSMFLNGESDLVLSYTTSPAYHLIAENDAKYASANFSEGHYMQVEVAAKVKGTMNPELADEFMSFILSDEFQSAMPTGNWMYPVTDVELPTGFETLSVPSKPLSFSADEVANHRRSWIREWQSALTF
SIO_010081: VA249_RS01545
subclass of: SO_0000673
so part of: VA249_RS01545
location: 314794..315786
location: region:314794-315786:1
so has part: feature:314794-315786:1:exon

WP_221068578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314794-315786:1:exon

VA249_RS01550
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: thiP
locus tag: VA249_RS01550
old locus tag: VYA_02950
so part of: sequence
location: 315788..317374
location: region:315788-317374:1
so has part: feature:315788-317374:1:exon
subclass of: SO_0000010

position:315788:1
position: 315788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317374:1
position: 317374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315788-317374:1:exon

VA249_RS01550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: thiP
locus tag: VA249_RS01550
old locus tag: VYA_02950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017449021.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0015888 - thiamine transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine/thiamine pyrophosphate ABC transporter permease ThiP
translation: MNSVPKIGLGVAMLIAAFVISALGALIVQAPSLNVSMIWEDPYYQHVTKFSFYQAFLSTVLSVGFAIPVAHSLSRREFYGKSMLLKLFASTLVLPVLVGVFGLLAIYGNSGAIANWLHSVDSELPFSIYGLNGILLAHVFFNMPYAARLLLQTLESIPSEQHKLCAHLGMSHWDKFRWVEWPRLRQQIPHVCGLVFMLCFTSFATVMALGGGPKSTTIELAIYQAIKFDFDLQTGALLALWQMLLCGLLAIGVQKLTKPVSISVGSTSVQQYLTRDHGWSKAWDSFWIIGAFLLVIPPLLMVFISGVNEQVWHVLRDERFWSALFNSLKVAVFASLLAVAAGVSILLTSRRWRLQNKNIRADQIELIGTIILVTPGLVISTGLFLLLRSFTDVFSLAFLIVILVNALMALPYVIKTLSQPMLHIEQQYQYVCASLGMRGWQRFKVVEWQALRKPFAHAFAVSFMFAIGDLSAIALFGGQEFRTLPLYLFQLLGSYQMDAAAVVSVTLLLLSVGCFTVIEKVLKAKGKA
SIO_010081: VA249_RS01550
subclass of: SO_0000673
so part of: VA249_RS01550
location: 315788..317374
location: region:315788-317374:1
so has part: feature:315788-317374:1:exon

WP_221068579.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:315788-317374:1:exon

VA249_RS01555
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: thiQ
locus tag: VA249_RS01555
old locus tag: VYA_02960
so part of: sequence
location: 317374..318078
location: region:317374-318078:1
so has part: feature:317374-318078:1:exon
subclass of: SO_0000010

position:318078:1
position: 318078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317374-318078:1:exon

VA249_RS01555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: thiQ
locus tag: VA249_RS01555
old locus tag: VYA_02960
EC number: 7.6.2.15
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012126906.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO function: GO:0048502 - ABC-type thiamine transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0030974 - thiamine pyrophosphate transmembrane transport [Evidence IEA]; GO:0015888 - thiamine transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine ABC transporter ATP-binding protein
translation: MLVLDDVLYTYQRERFRFELEIKRGQIVSLMGPSGAGKSTLLALVAGFIKPDQGNILVNGESVLGKAPFLRPFSMLFQEHNLFAHLSVRENIGLGLHPGLKLTIDQKLLVEQAAEQVGVAEYLDRLPEHLSGGQRQRVALARCFVQPHPMWLLDEPFSALDPVLREEMLALVKQLAAERSITVLMVTHHLSDARAIASHFAFVADGQVEAVGDIAELTEQHGSERLSAFVRAAG
SIO_010081: VA249_RS01555
subclass of: SO_0000673
so part of: VA249_RS01555
location: 317374..318078
location: region:317374-318078:1
so has part: feature:317374-318078:1:exon

WP_128812340.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317374-318078:1:exon

VA249_RS01560
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01560
old locus tag: VYA_02970
so part of: sequence
location: complement(318280..318717)
location: region:318280-318717:-1
so has part: feature:318280-318717:-1:exon
subclass of: SO_0000010

position:318280:-1
position: 318280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318717:-1
position: 318717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318280-318717:-1:exon

VA249_RS01560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01560
old locus tag: VYA_02970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011078755.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: universal stress protein
translation: MYKQILVPVDLNDQGFCDRAVKLAVWQAKQANAEVHLLTVVPGIHMSMVATYFPKDAAMKMKQDVKQQLKAFANDNIDDEVIYKVHVAEGKPYTTILDYAERLGADLIIMPSHKRSKINKVMLGSVASKVVEHSPINVMVVKPQS
SIO_010081: VA249_RS01560
subclass of: SO_0000673
so part of: VA249_RS01560
location: complement(318280..318717)
location: region:318280-318717:-1
so has part: feature:318280-318717:-1:exon

WP_128811760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318280-318717:-1:exon

VA249_RS01565
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01565
old locus tag: VYA_02980
so part of: sequence
location: complement(318762..321341)
location: region:318762-321341:-1
so has part: feature:318762-321341:-1:exon
subclass of: SO_0000010

position:318762:-1
position: 318762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321341:-1
position: 321341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318762-321341:-1:exon

VA249_RS01565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01565
old locus tag: VYA_02980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004740829.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRAP transporter permease
translation: MSTNNTPSQDVQEMVAQSDTGARRPVGLQGRILWFVPLCWSLFQLWYASPLPFIFNFGVLNDTEARAIHLTFATFLAFTAYPAMKNSPRDHIPLIDWILALAGSFAAAYIYIFYTELAGRSGAPTTVDIVVSVTGMALLLEATRRALGPPLMVVAAVFLLYTFAGPHMPDVIAHKGASLNKAMSHLWLTTEGVFGVALGVSTSFVFLFVLFGAMLERAGAGAYFIKVAFSLLGHMKGGPAKAAVVASGLSGLVSGSSIANVVTTGTFTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFLMVEYVGISYVEVIKAALLPALISYIALIYIVHLEACKAGMTGLPRRHNPTLVQSLLSFTGTILGLCVISALVYYGVGWTKDVFGAAATPIVTIALLIAYVGLVKISANHVKDGAIEIDAELTEVPDPGPTIKSGLHYLLPIVVLVWCLTVERFSPGLSAFWATVFMIFILLTQRPLIALLSKQGDLVEQTKDGFVDLAESLVSGARNMIGIGVATAAAGTVVGVVTLTGIGLVMTDFVEFISGGSLILMLVFTAVISLILGMGLPTTANYIVVSTLMAPVIVTLGAAHGLIIPLIAVHLFVFYFGILADDTPPVGLAAFAAAAIAKSDPIRTGIQGFTYDIRTAILPFMFVFNTQLLMMGIDSWWHLALTVISSIIAMLIFSAATQGWWFTKNKWWETILLLVLTFSFLRPGYWWDMLYPAKVLSPGVEIAQITEGLNVGESIELRVAGENLEGNYVEKTVRLPFEDSATSAEDRIASMGLMLIENDGKMIVDMVEFGSPAESSGIDFDWEIKSVIQNAERPMKEWVFVPSLLILLVLAMNQKRRARNEQLSA
SIO_010081: VA249_RS01565
subclass of: SO_0000673
so part of: VA249_RS01565
location: complement(318762..321341)
location: region:318762-321341:-1
so has part: feature:318762-321341:-1:exon

WP_221068580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318762-321341:-1:exon

VA249_RS01570
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01570
old locus tag: VYA_02990
so part of: sequence
location: complement(321649..322617)
location: region:321649-322617:-1
so has part: feature:321649-322617:-1:exon
subclass of: SO_0000010

position:321649:-1
position: 321649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322617:-1
position: 322617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321649-322617:-1:exon

VA249_RS01570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01570
old locus tag: VYA_02990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010434410.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TAXI family TRAP transporter solute-binding subunit
translation: MAFNKLLKVGAIAAAVMGAGAVNAQEFITIGTGSVTGVYYPTGGAICKLVNKGRKDHNVRCSVESTGGSIYNVNTIRAGELDFGIVQSDWQYHGYNGTSKFAEQGPYNKLRAMFSLHTEPFNIIARADSGIENVQDLKGKRVNIGNPGSGDRATMGVVMDAMGWTNDSFKLASELKGSERSQALCDNKIDAFIYMVGHPNGSIKEATTSCDAKLVSATGPEIDKIVADNPYYAFSTVPAGMYRGTDGDINSFGVAATMVTTSDVSDEVAYNVAKAVFENFSTFKRLHPAFANLKKEDMVKAGLSIPLHPGAEKYYKEVGLLK
SIO_010081: VA249_RS01570
subclass of: SO_0000673
so part of: VA249_RS01570
location: complement(321649..322617)
location: region:321649-322617:-1
so has part: feature:321649-322617:-1:exon

WP_221068581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321649-322617:-1:exon

VA249_RS01575
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: argR
locus tag: VA249_RS01575
old locus tag: VYA_03000
so part of: sequence
location: complement(323032..323502)
location: region:323032-323502:-1
so has part: feature:323032-323502:-1:exon
subclass of: SO_0000010

position:323032:-1
position: 323032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323502:-1
position: 323502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323032-323502:-1:exon

VA249_RS01575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: argR
locus tag: VA249_RS01575
old locus tag: VYA_03000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011078752.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator ArgR
translation: MRNSEKQDNLVRAFKALLKEESFGSQGEIVDALKQQGFESINQSKVSRMLTKFGAVRTRNAKMEMVYCLPAELGVPTVSSSLRELVLDIDHNAALVVIHTGPGAAQLIARLLDSLGKSEGILGVVAGDDTIFITPTKTVTTEQLFQSVCELFEYAG
SIO_010081: VA249_RS01575
subclass of: SO_0000673
so part of: VA249_RS01575
location: complement(323032..323502)
location: region:323032-323502:-1
so has part: feature:323032-323502:-1:exon

WP_128812339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323032-323502:-1:exon

VA249_RS01580
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: mdh
locus tag: VA249_RS01580
old locus tag: VYA_03010
so part of: sequence
location: 323836..324771
location: region:323836-324771:1
so has part: feature:323836-324771:1:exon
subclass of: SO_0000010

position:323836:1
position: 323836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324771:1
position: 324771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323836-324771:1:exon

VA249_RS01580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: mdh
locus tag: VA249_RS01580
old locus tag: VYA_03010
EC number: 1.1.1.37
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012126909.1
GO function: GO:0030060 - L-malate dehydrogenase activity [Evidence IEA]
GO process: GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: malate dehydrogenase
translation: MKVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTPVSIQGYAGEDPTPALEGADVVLISAGVARKPGMDRADLFNVNAGIVKSLAEKIAVVCPTACVGIITNPVNTTVPIAAEVLKKAGVYDKRKLFGVTTLDVIRSETFVAELKDKDPGDVRVPVIGGHSGVTILPLLSQVEGVEFTAEEVEALTKRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLALVRALQGEEGVVECAYVEGDGEHATYFAQPVKLGKDGVEEVLSYGALSDYEKSALDGMLETLNGDINIGVEFAK
SIO_010081: VA249_RS01580
subclass of: SO_0000673
so part of: VA249_RS01580
location: 323836..324771
location: region:323836-324771:1
so has part: feature:323836-324771:1:exon

WP_221068582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323836-324771:1:exon

VA249_RS01585
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01585
old locus tag: VYA_03020
so part of: sequence
location: 324973..325164
location: region:324973-325164:1
so has part: feature:324973-325164:1:exon
subclass of: SO_0000010

position:324973:1
position: 324973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325164:1
position: 325164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324973-325164:1:exon

VA249_RS01585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01585
old locus tag: VYA_03020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010445455.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEANQIRKGMVVECQQGVGTIIVVDREAETVLLSKQGSEEQLAVSFDEIEDNPQLHGNCDRYY
SIO_010081: VA249_RS01585
subclass of: SO_0000673
so part of: VA249_RS01585
location: 324973..325164
location: region:324973-325164:1
so has part: feature:324973-325164:1:exon

WP_221069778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324973-325164:1:exon

VA249_RS01590
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: ispB
locus tag: VA249_RS01590
old locus tag: VYA_03030
so part of: sequence
location: complement(325284..326255)
location: region:325284-326255:-1
so has part: feature:325284-326255:-1:exon
subclass of: SO_0000010

position:325284:-1
position: 325284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326255:-1
position: 326255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325284-326255:-1:exon

VA249_RS01590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: ispB
locus tag: VA249_RS01590
old locus tag: VYA_03030
EC number: 2.5.1.90
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017817251.1
GO process: GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: octaprenyl diphosphate synthase
translation: MDFKTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAILSARALGYQGSGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMMTELGSMKILKLMSEAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFESATQIGAILNEAPEEVEVALQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHAMRNTTPENALMIREAIEKANGMDRLEEILAVMKDAGSLEYTTQRALDEADKAIAELTILPESDYKQALVTLAHMAVKRTS
SIO_010081: VA249_RS01590
subclass of: SO_0000673
so part of: VA249_RS01590
location: complement(325284..326255)
location: region:325284-326255:-1
so has part: feature:325284-326255:-1:exon

WP_221068583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325284-326255:-1:exon

VA249_RS01595
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rplU
locus tag: VA249_RS01595
old locus tag: VYA_03040
so part of: sequence
location: 326524..326835
location: region:326524-326835:1
so has part: feature:326524-326835:1:exon
subclass of: SO_0000010

position:326524:1
position: 326524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326835:1
position: 326835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326524-326835:1:exon

VA249_RS01595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rplU
locus tag: VA249_RS01595
old locus tag: VYA_03040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L21
translation: MYAVFQSGGKQHRVSEGQTLRLEKLDVETGATVEFDKVLLVANGEDIKVGAPLVEGGKVVAEVVQHGRGDKVKIVKFRRRKHSRKQQGHRQWFTEVKITGINA
SIO_010081: VA249_RS01595
subclass of: SO_0000673
so part of: VA249_RS01595
location: 326524..326835
location: region:326524-326835:1
so has part: feature:326524-326835:1:exon

WP_000271393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326524-326835:1:exon

VA249_RS01600
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rpmA
locus tag: VA249_RS01600
old locus tag: VYA_03050
so part of: sequence
location: 326856..327113
location: region:326856-327113:1
so has part: feature:326856-327113:1:exon
subclass of: SO_0000010

position:326856:1
position: 326856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327113:1
position: 327113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326856-327113:1:exon

VA249_RS01600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rpmA
locus tag: VA249_RS01600
old locus tag: VYA_03050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L27
translation: MAHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGNNVGIGKDHTLFALTEGKVKFEVKGPKNRKFVSIEAE
SIO_010081: VA249_RS01600
subclass of: SO_0000673
so part of: VA249_RS01600
location: 326856..327113
location: region:326856-327113:1
so has part: feature:326856-327113:1:exon

WP_005383095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326856-327113:1:exon

VA249_RS01605
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: cgtA
locus tag: VA249_RS01605
old locus tag: VYA_03060
so part of: sequence
location: 327325..328500
location: region:327325-328500:1
so has part: feature:327325-328500:1:exon
subclass of: SO_0000010

position:327325:1
position: 327325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328500:1
position: 328500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327325-328500:1:exon

VA249_RS01605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: cgtA
locus tag: VA249_RS01605
old locus tag: VYA_03060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009847831.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Obg family GTPase CgtA
translation: MKFVDEAVVKVQAGDGGSGVVSFWREKFITKGGPDGGDGGDGGDVYIQADENLNTLIDYRFQRFYEAERGENGRGGNCTGKRGKDITMRVPVGTRAVDIHTNEIVAEVAEHGKKVMVAKGGWHGLGNTRFKSSVNRAPRQRTLGTKGEIREIRLELLLLADVGMLGLPNAGKSTFIRAVSAAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADGAGLGIRFLKHLERCRVLLHMIDIMPIDQSDPVQNALTIIDELEQYSEKLANKPRWLVFNKTDLMPEEEANEQIQAILDALGWEDEYFKISAINRAGTKELCYKLAEFMENLPREEEEVAEEDKVNFMWDDYHKDAMAGKDVITEDDEDDWDDWDDEEDDGHVVYVRD
SIO_010081: VA249_RS01605
subclass of: SO_0000673
so part of: VA249_RS01605
location: 327325..328500
location: region:327325-328500:1
so has part: feature:327325-328500:1:exon

WP_128811753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327325-328500:1:exon

VA249_RS01610
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01610
old locus tag: VYA_03070
so part of: sequence
location: complement(328622..330058)
location: region:328622-330058:-1
so has part: feature:328622-330058:-1:exon
subclass of: SO_0000010

position:328622:-1
position: 328622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330058:-1
position: 330058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328622-330058:-1:exon

VA249_RS01610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01610
old locus tag: VYA_03070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017428762.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1182 family transposase
translation: MLQEPTPQQYELEMVTMEQLVPKDHLVRKIDNAIDFEFIRDEVAHLYCKDNGRPPVDPVRLFKIILLGYIFGIKSERQLVKEIEVNVAYRWFLRMSLTEKVIHASTLSQNRIRRFNGTDVFERIFINIVEQAISKGLVAGQELFTDSTHLKANANKNKHTNKVTAVRASAYLDMLDEDVTLDREIAGKKPLKARGSESKTKNTKTSTTDPESGFMTRDNKPQGFFYLDHRTVDGQHGIILDTYTTAGNINDSQPYVQRLDYTLATFQLNPIAVGLDAGYFTAPVAESLERRGILGVFGYRRPSRTKNTFKKKHFTYDAQRDSYQCPNGQELLYKTTSRDAYREYHSDPKECAFCPMRNDCTQSKNMKKVIARHIYSDAVERANQMRLSSYGKKTYRRRSETVERSFADAKQHHGHRYARFRGLANVQMQCWLAAAAQNIKKIALVMSYLRKMGLNMAEIRQILASVCLCNEWKLLRTI
SIO_010081: VA249_RS01610
subclass of: SO_0000673
so part of: VA249_RS01610
location: complement(328622..330058)
location: region:328622-330058:-1
so has part: feature:328622-330058:-1:exon

WP_221067583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328622-330058:-1:exon

VA249_RS01615
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01615
old locus tag: VYA_03080
so part of: sequence
location: 330243..331043
location: region:330243-331043:1
so has part: feature:330243-331043:1:exon
subclass of: SO_0000010

position:330243:1
position: 330243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331043:1
position: 331043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330243-331043:1:exon

VA249_RS01615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01615
old locus tag: VYA_03080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020335835.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: threonine/serine exporter family protein
translation: MTMEVMSSEELARINQRTISRLVAQAGQMLLAHGAESTLVSDIMRRIGLACEVNEVEVALSANALVVTTVMGDHCITTTRSCADRGINMRVITQIQRICIMMERGLLDVKMAQKKLNTISPERYNRWLVVSMIGLSCAAFSHLAGGDLGVFAMTFLASAGGMIVRQEIGHRHFNPLLNFAVTAFVTTLISAQAVIFEIGNLPTVAMASSVLMLVPGFPLINSVADMLKGHINMGIARFTMASLLTLATCLGIVAAMEVTGIWGWMS
SIO_010081: VA249_RS01615
subclass of: SO_0000673
so part of: VA249_RS01615
location: 330243..331043
location: region:330243-331043:1
so has part: feature:330243-331043:1:exon

WP_221068584.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330243-331043:1:exon

VA249_RS01620
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01620
old locus tag: VYA_03090
so part of: sequence
location: 331043..331516
location: region:331043-331516:1
so has part: feature:331043-331516:1:exon
subclass of: SO_0000010

position:331516:1
position: 331516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331043-331516:1:exon

VA249_RS01620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01620
old locus tag: VYA_03090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009698851.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: threonine/serine exporter family protein
translation: MSAFDLALGLLNDMFFAAIPAVGFAMVFNVPQNALKYCAMGGAIGHGSRYLMMHFGLSIEWATFFAATLVGMIGVLWSRRFLAHPKVFTVAALIPMVPGVFAYKAMIAMVEINHLGYSPELIATCMENFLKAMFIIAGLAVGLAVPGLLFYRRRPIV
SIO_010081: VA249_RS01620
subclass of: SO_0000673
so part of: VA249_RS01620
location: 331043..331516
location: region:331043-331516:1
so has part: feature:331043-331516:1:exon

WP_164837222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:331043-331516:1:exon

VA249_RS01625
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: folA
locus tag: VA249_RS01625
old locus tag: VYA_03100
so part of: sequence
location: 331526..332005
location: region:331526-332005:1
so has part: feature:331526-332005:1:exon
subclass of: SO_0000010

position:331526:1
position: 331526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332005:1
position: 332005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331526-332005:1:exon

VA249_RS01625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: folA
locus tag: VA249_RS01625
old locus tag: VYA_03100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010445610.1
GO function: GO:0004146 - dihydrofolate reductase activity [Evidence IEA]
GO process: GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type 3 dihydrofolate reductase
translation: MIISMIAAMADNRIIGKDNQMPWHLPADFAWFKRSTMGKPVVMGRKTYDSIGRPLPGRLNIVISRDASLSIEGVTTVTSIEQALEAAGSVEEVMIIGGGAIYAACLPMANKLYVTHIEAEVEGDTQFPRWSNDFKETYSEAYQADEKNAYNMRFTILEK
SIO_010081: VA249_RS01625
subclass of: SO_0000673
so part of: VA249_RS01625
location: 331526..332005
location: region:331526-332005:1
so has part: feature:331526-332005:1:exon

WP_221068585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:331526-332005:1:exon

VA249_RS01630
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: apaH
locus tag: VA249_RS01630
old locus tag: VYA_03110
pseudo: true
so part of: sequence
location: complement(332075..332880)
location: region:332075-332880:-1
so has part: feature:332075-332880:-1:exon
subclass of: SO_0000010

position:332075:-1
position: 332075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332880:-1
position: 332880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332075-332880:-1:exon

VA249_RS01630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: apaH
locus tag: VA249_RS01630
old locus tag: VYA_03110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005430432.1
GO function: GO:0008803 - bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity [Evidence IEA]
GO process: GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH
SIO_010081: VA249_RS01630
subclass of: SO_0000673
so part of: VA249_RS01630
location: complement(332075..332880)
location: region:332075-332880:-1
so has part: feature:332075-332880:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:332075-332880:-1:exon

VA249_RS01635
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: apaG
locus tag: VA249_RS01635
old locus tag: VYA_03120
so part of: sequence
location: complement(332893..333273)
location: region:332893-333273:-1
so has part: feature:332893-333273:-1:exon
subclass of: SO_0000010

position:332893:-1
position: 332893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333273:-1
position: 333273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332893-333273:-1:exon

VA249_RS01635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: apaG
locus tag: VA249_RS01635
old locus tag: VYA_03120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005528600.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Co2+/Mg2+ efflux protein ApaG
translation: MDVIQPCIKIQVHTKYIEEQSNPELQRFIFAYVITIKNLSQQTVQLISRRWLITDANGKQMTVEGDGVVGQQPFISSNDEYTYNSGTAIETPVGVMQGHYVMLDEKGQEFITEIEPFRLAVPNVLN
SIO_010081: VA249_RS01635
subclass of: SO_0000673
so part of: VA249_RS01635
location: complement(332893..333273)
location: region:332893-333273:-1
so has part: feature:332893-333273:-1:exon

WP_128811748.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:332893-333273:-1:exon

VA249_RS01640
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rsmA
locus tag: VA249_RS01640
old locus tag: VYA_03130
so part of: sequence
location: complement(333383..334192)
location: region:333383-334192:-1
so has part: feature:333383-334192:-1:exon
subclass of: SO_0000010

position:333383:-1
position: 333383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334192:-1
position: 334192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333383-334192:-1:exon

VA249_RS01640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rsmA
locus tag: VA249_RS01640
old locus tag: VYA_03130
EC number: 2.1.1.182
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005379669.1
GO function: GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
translation: MRNDVHLGHKARKRFGQNFLNDPYIIDGIVSAINPRPGQNLVEIGPGLGAITEPVGREVDKFTVIELDRDLAERLRNHPELADKLTIHEGDAMRFDFNQLVKPNNKLRIFGNLPYNISTPLMFHLFEFHKDVQDMHFMLQKEVVNRLAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAFVPPPKVDSAVVRLVPYEVLPHPAKDLRLLDRVCREGFNQRRKTVRNCYKSLLSVEVLEELGINPSMRPENLTLQQFVAMANWLADNPQH
SIO_010081: VA249_RS01640
subclass of: SO_0000673
so part of: VA249_RS01640
location: complement(333383..334192)
location: region:333383-334192:-1
so has part: feature:333383-334192:-1:exon

WP_211915466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333383-334192:-1:exon

VA249_RS01645
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: pdxA
locus tag: VA249_RS01645
old locus tag: VYA_03140
so part of: sequence
location: complement(334189..335187)
location: region:334189-335187:-1
so has part: feature:334189-335187:-1:exon
subclass of: SO_0000010

position:334189:-1
position: 334189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335187:-1
position: 335187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334189-335187:-1:exon

VA249_RS01645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: pdxA
locus tag: VA249_RS01645
old locus tag: VYA_03140
EC number: 1.1.1.262
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005430439.1
GO function: GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]
GO process: GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA
translation: MTTNPIRRIVVTAGEPAGIGPDLVLALSKEDWAHQIVVCADKNMLMTRANLLGIDVQLTDYNPKEAPKAQKAGTLIVDHIEMAENVVAGQLNEANGHYVLKTLERAALGCMNDEFDAIVTGPVHKGVINRSGVAFSGHTEFFAEKSNTPLVVMMLATEGLRVALVTTHIPLAYVSKAVTQERLEKIIDILNNDLVEKFAISKPNIYVCGLNPHAGEDGCLGREEIETITPTLEKIRQEKGINLIGPLPADTIFNEKYLNDADAVLGMYHDQVLPVLKYKGFGRSVNITLGLPFIRTSVDHGTALELAGTGQADTGSFRTALTHAIELVEKKQ
SIO_010081: VA249_RS01645
subclass of: SO_0000673
so part of: VA249_RS01645
location: complement(334189..335187)
location: region:334189-335187:-1
so has part: feature:334189-335187:-1:exon

WP_211916518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334189-335187:-1:exon

VA249_RS01650
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: surA
locus tag: VA249_RS01650
old locus tag: VYA_03150
so part of: sequence
location: complement(335177..336460)
location: region:335177-336460:-1
so has part: feature:335177-336460:-1:exon
subclass of: SO_0000010

position:335177:-1
position: 335177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336460:-1
position: 336460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335177-336460:-1:exon

VA249_RS01650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: surA
locus tag: VA249_RS01650
old locus tag: VYA_03150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020193958.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0042277 - peptide binding [Evidence IEA]; GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO process: GO:0043165 - Gram-negative-bacterium-type cell outer membrane assembly [Evidence IEA]; GO:0060274 - maintenance of stationary phase [Evidence IEA]; GO:0006457 - protein folding [Evidence IEA]; GO:0050821 - protein stabilization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidylprolyl isomerase SurA
translation: MKIWKSIIFTTLLSCGAVAAPVELDKVAVIVNDGVILQSDINTAMKTLQANARQSGQNIPSASVLKDQVVEKLIIDTLQGQEAERIGVRIDDNRLNQAIAEIARNNNQTVEQLSASVQTEGLSYSEFREQIRKELAASEARNALVRRRINILPAEVDSLAEQLSQQTNATVQYKIGHIQLRFNDDKDKSEVETEANELVKKLKDGANFSEMAYTYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIEDVKGLETVAVTEVNARHILIKPTVILSDDGAKKELNEFVRRIKAGEATFAELATQYSQDPGSAAQDGELGYQTPDLYVPEFKHQVETLPVGSISEPFKTVHGWHIVEVLDRRQVDRTDSAMKNKAYRILFNRKFNEEAGAWMQELRASAFVEIVDDNDDN
SIO_010081: VA249_RS01650
subclass of: SO_0000673
so part of: VA249_RS01650
location: complement(335177..336460)
location: region:335177-336460:-1
so has part: feature:335177-336460:-1:exon

WP_221068586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:335177-336460:-1:exon

VA249_RS01655
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: lptD
locus tag: VA249_RS01655
old locus tag: VYA_03160
so part of: sequence
location: complement(336522..338891)
location: region:336522-338891:-1
so has part: feature:336522-338891:-1:exon
subclass of: SO_0000010

position:336522:-1
position: 336522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338891:-1
position: 338891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336522-338891:-1:exon

VA249_RS01655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: lptD
locus tag: VA249_RS01655
old locus tag: VYA_03160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006742729.1
GO component: GO:0019867 - outer membrane [Evidence IEA]
GO process: GO:0043165 - Gram-negative-bacterium-type cell outer membrane assembly [Evidence IEA]; GO:0015920 - lipopolysaccharide transport [Evidence IEA]; GO:0010033 - response to organic substance [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPS assembly protein LptD
translation: MQHFSRTFLAASISTALLVPTTQAEVNIQDSVQEMPTTDQCLVTASGEEDALNAPVVVQADSLQAINGDKAQYSGNVEVTQGPKKITADSVTLHQQDNVVVAEGNVTFNDGQVKARSDRVTNDINQDTFSLENTDYQFLCQQGRGTAAYIARTGQSVYELEDGSITSCPQGDNSWRLVASGIDVDQDEETATLHHPRFEILDVPVFYVPYLTMPIGDTRKTGFLFPSLSYGSSDGLEVEVPFYWNIAPEYDMTLTTLYMQQRGTKLDADFRYLTDGWGQGEIKTEYMNSDKKYQDESRWGYQFKHDGIINKHWVVKADYSRVSDIDYFRDLSSDLGNREDGQLIQEGQVKYRSDFWDASLTVRDFQILLPDENKPYRLLPQFDLNYYTPLWGDYVNFDVKSQISRFEVEDTDRPNATRVHIEPGLTIPLSNTWATWTTEARVLSTYYSQDISDLTDAKLKSQLDENVSRVIPEFRSHAQLYLERDTTFIEGYTQTLEPQIQYLYIPEEDQSNIYDYDTTQLQTDYYGLFRSRRYSGLDFIAAANQLSYGASTRFFDEDYKERLNISFGQIYYINKDTKFNKKSQDNASDSSATNYSSWAIETDFNYNDYLFYHGGIQYDVDLGEMQLANSTLEYQYEGGFIQGNYRYVTLDYITNTVQNNDDARTDWSRVTRKGISQAGIVTAYEFNPRWSASGQYYYDLNESNTLEWLASLRYQSDCWYIGFTYSNQLLGWEGDVIGSEDASPEYENNISVNFGIQGFATSERAATAAKELDGSDNAIKYGRPFYLNN
SIO_010081: VA249_RS01655
subclass of: SO_0000673
so part of: VA249_RS01655
location: complement(336522..338891)
location: region:336522-338891:-1
so has part: feature:336522-338891:-1:exon

WP_221068587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336522-338891:-1:exon

VA249_RS01660
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: djlA
locus tag: VA249_RS01660
old locus tag: VYA_03170
so part of: sequence
location: 339162..340013
location: region:339162-340013:1
so has part: feature:339162-340013:1:exon
subclass of: SO_0000010

position:339162:1
position: 339162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340013:1
position: 340013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339162-340013:1:exon

VA249_RS01660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: djlA
locus tag: VA249_RS01660
old locus tag: VYA_03170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017073057.1
GO function: GO:0051087 - chaperone binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: co-chaperone DjlA
translation: MQIFGKILGAFFGLLLGGPFGLLLGLFIGHQFDKARRLSQAGFSTGGFGKGPSQAQRQEEFFKAAFAVMGHVAKAKGQVTKEEIQLASAMMERMNLHGEQRRAAQDAFREGKESDFPLDDVLMRVKISSSGRFDLLQFFLELQISAAFADGAVHPSERNVLHKIARGLGFSSEQLERRLHMQEAAFRFQSQGGFHGQQGQYQSSDWQQASQADKLADAYEILDVSSDADSKTVKRAYRKLMNEHHPDKLMAKGLPPEMMNVAKEKSQEIQNAYDLIKKVKGFK
SIO_010081: VA249_RS01660
subclass of: SO_0000673
so part of: VA249_RS01660
location: 339162..340013
location: region:339162-340013:1
so has part: feature:339162-340013:1:exon

WP_128811744.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339162-340013:1:exon

VA249_RS01665
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01665
old locus tag: VYA_03180
so part of: sequence
location: complement(340189..340971)
location: region:340189-340971:-1
so has part: feature:340189-340971:-1:exon
subclass of: SO_0000010

position:340189:-1
position: 340189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340971:-1
position: 340971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340189-340971:-1:exon

VA249_RS01665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01665
old locus tag: VYA_03180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013572465.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF547 domain-containing protein
translation: MKRLLLLLCALVSFSTFSAPKSDLWPYWKQSNEANQNQISHQEWQQLLDTYLVEQGENALFRYNKVSSTDKATLKQYIQRLAKLDPLQYKQAEQYAYWVNLYNAITVKLILDNYPVESITKLGGLFSFGPWGEDVVVINGKSLTLNDIEHRILRPIWNDPRTHYAVNCASLGCPNLQTQAFTADNTQALLDNAAKTFINSKKGVSVQGNTAQLSSIYEWFANDFGGEKQLFNHISEYAPQYKNFSGKVTYEYDWSLNQVQ
SIO_010081: VA249_RS01665
subclass of: SO_0000673
so part of: VA249_RS01665
location: complement(340189..340971)
location: region:340189-340971:-1
so has part: feature:340189-340971:-1:exon

WP_221068588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340189-340971:-1:exon

VA249_RS01670
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: leuD
locus tag: VA249_RS01670
old locus tag: VYA_03190
so part of: sequence
location: complement(341104..341706)
location: region:341104-341706:-1
so has part: feature:341104-341706:-1:exon
subclass of: SO_0000010

position:341104:-1
position: 341104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341706:-1
position: 341706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341104-341706:-1:exon

VA249_RS01670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: leuD
locus tag: VA249_RS01670
old locus tag: VYA_03190
EC number: 4.2.1.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012126923.1
GO component: GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO function: GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO process: GO:0009098 - leucine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-isopropylmalate dehydratase small subunit
translation: MSGFKQHTGLVVPLDAANVDTDAIIPKQFLQKVSRLGFGKHLFHDWRFLDDAGEQPNPEFVMNAPRYKGASILLARENFGCGSSREHAPWALADYGIKAMIAPSFADIFYGNSINNQMVPVRLTEQEVDEIFQFVEAHEGAEVEVDLEANVVRANGKEYGFEIDSFRRHCLLNGLDNIGLTLQHEDKIAEYEANIPSFLS
SIO_010081: VA249_RS01670
subclass of: SO_0000673
so part of: VA249_RS01670
location: complement(341104..341706)
location: region:341104-341706:-1
so has part: feature:341104-341706:-1:exon

WP_221068589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:341104-341706:-1:exon

VA249_RS01675
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: leuC
locus tag: VA249_RS01675
old locus tag: VYA_03200
so part of: sequence
location: complement(341719..343137)
location: region:341719-343137:-1
so has part: feature:341719-343137:-1:exon
subclass of: SO_0000010

position:341719:-1
position: 341719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343137:-1
position: 343137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341719-343137:-1:exon

VA249_RS01675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: leuC
locus tag: VA249_RS01675
old locus tag: VYA_03200
EC number: 4.2.1.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005450463.1
GO component: GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO function: GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO process: GO:0009098 - leucine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-isopropylmalate dehydratase large subunit
translation: MAKTLYEKVYDAHVAVAAEGENPILYIDRHLVHEVTSPQAFDGLREKGRQVRQVSKTFATMDHNVSTTTKDINASGEMARIQMETLSKNCEEFGVTLYDINHKYQGIVHVMGPELGITLPGMTIVCGDSHTATHGAFGSLAFGIGTSEVEHVLATQTLKQARAKTMKIEVKGKVAPGITAKDIVLAIIGETTAAGGTGYVVEFCGEAITDLSMEGRMTVCNMAIELGAKAGLIAPDETTFEYIKGRKFSPQGADFDAAVEYWKTLKTDDAAQFDAVVTLNAADIKPQVTWGTNPGQVIAVDQPIPAPESFSDPVEKASAEKALAYMGLESGKSLSDYNVDKVFVGSCTNSRIEDMRAAADVAKGRKVAAHVQALIVPGSEQVKAQAEAEGLDVIFKEAGFEWRLPGCSMCLAMNNDRLGPHERCASTSNRNFEGRQGRDGRTHLVSPAMAAAAAIAGHFVDIRELAFFDKQD
SIO_010081: VA249_RS01675
subclass of: SO_0000673
so part of: VA249_RS01675
location: complement(341719..343137)
location: region:341719-343137:-1
so has part: feature:341719-343137:-1:exon

WP_221068590.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:341719-343137:-1:exon

VA249_RS01680
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: leuB
locus tag: VA249_RS01680
old locus tag: VYA_03210
so part of: sequence
location: complement(343161..344252)
location: region:343161-344252:-1
so has part: feature:343161-344252:-1:exon
subclass of: SO_0000010

position:343161:-1
position: 343161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344252:-1
position: 344252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343161-344252:-1:exon

VA249_RS01680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: leuB
locus tag: VA249_RS01680
old locus tag: VYA_03210
EC number: 1.1.1.85
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012126925.1
GO function: GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]
GO process: GO:0009098 - leucine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-isopropylmalate dehydrogenase
translation: MTDKSYKIAVLPGDGIGPEVMAQAHKVLDAIEKKHGIAFERDEHDVGGIAIDNHGCPLPESTVKACEESDAVLFGSVGGPKWEHLPANDQPERGALLPLRKHFQLFCNLRPAQIHAGLEAFSPLRADISGRGFDIVVVRELTGGIYFGQPKGREGEGSTEKAFDTEVYHRFEIERIAKIAFESARLRRKKVCSIDKANVLQSSILWREVVEQIAKDYPDVELSHMYIDNATMQLIKDPAQFDVMLCSNIFGDIISDECAMITGSMGMLPSASLNESKFGLYEPAGGSAPDIAGKNIANPVAQILSAALMLRYSLGEEAAALDIENAVSKALSAGELTGDLAGDNLALSTSEMGDKIAEYILNS
SIO_010081: VA249_RS01680
subclass of: SO_0000673
so part of: VA249_RS01680
location: complement(343161..344252)
location: region:343161-344252:-1
so has part: feature:343161-344252:-1:exon

WP_221068591.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:343161-344252:-1:exon

VA249_RS01685
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: leuA
locus tag: VA249_RS01685
old locus tag: VYA_03220
so part of: sequence
location: complement(344340..345887)
location: region:344340-345887:-1
so has part: feature:344340-345887:-1:exon
subclass of: SO_0000010

position:344340:-1
position: 344340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345887:-1
position: 345887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344340-345887:-1:exon

VA249_RS01685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: leuA
locus tag: VA249_RS01685
old locus tag: VYA_03220
EC number: 2.3.3.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005528614.1
GO function: GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
GO process: GO:0019752 - carboxylic acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-isopropylmalate synthase
translation: MNDQVIIFDTTLRDGEQALSASLTVKEKLQIAYALERLGVDVIEAGFPVSSPGDFESVQTIAKHIKNSRVCALSRAVAKDIDAAAQALKVADAFRIHTFISTSTVHVQDKLRRSYDDVVEMAVKAVRHARNYTDDVEFSCEDAGRTPIDNLCRMVEAAIDAGASTINIPDTVGYTVPSEFGGIIQTLFNRVPNIDKAIISVHCHDDLGMSVANSIAAVQAGARQVEGTINGIGERAGNCSLEEIAMILKTRQEFMGVHTGLKHDEIHRTSKLVSQLCNMPIQSNKAIVGANAFSHSSGIHQDGMLKNKNTYEIMTPESIGLKNQALNLTSRSGRAAVKSHMDAMGYKDEEYNLDALYEDFLKLADRKGQVFDYDLEALMHFSNLREEDDFYKLNYLSVQSGSVMATTSVKMQCGDVEKSEAAVGNGPVDALYQCIYRVTGYEIVLDKFDLTAKGEGEDGLGQADIIANYKGRKYHGTGVSTDIVEASGQALLHVINSIHRADTIEEMKQKKIATV
SIO_010081: VA249_RS01685
subclass of: SO_0000673
so part of: VA249_RS01685
location: complement(344340..345887)
location: region:344340-345887:-1
so has part: feature:344340-345887:-1:exon

WP_221068592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:344340-345887:-1:exon

VA249_RS01690
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01690
old locus tag: VYA_03230
so part of: sequence
location: 346397..347188
location: region:346397-347188:1
so has part: feature:346397-347188:1:exon
subclass of: SO_0000010

position:346397:1
position: 346397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347188:1
position: 347188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346397-347188:1:exon

VA249_RS01690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01690
old locus tag: VYA_03230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020193963.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SH3 domain-containing protein
translation: MVLAKQFGRFVLSLSLVSLPGCQLLQLVNKDETPSSVMMSDHEQSIRVINEQMAQYLSEDGRESFLNQMLVALESDNRDRFKGKDPETYSWWNILVQPNQWKEAEIKQATVKGVDTSYHFEFMDVPYRAKTTLHLLAHPDTNSLRVGELSKDEDFNAIAKVEGEPWLLVEQDGMVKGYIHQEYARSNVLDHDILSTKPNELLARSENARQITSKSELFGRYTCRDLVYELTKDERVTTASLRACRKQRKIWYIDVPETNTKPL
SIO_010081: VA249_RS01690
subclass of: SO_0000673
so part of: VA249_RS01690
location: 346397..347188
location: region:346397-347188:1
so has part: feature:346397-347188:1:exon

WP_221068593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346397-347188:1:exon

VA249_RS01695
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01695
old locus tag: VYA_03240
so part of: sequence
location: 347327..347881
location: region:347327-347881:1
so has part: feature:347327-347881:1:exon
subclass of: SO_0000010

position:347327:1
position: 347327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347881:1
position: 347881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347327-347881:1:exon

VA249_RS01695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01695
old locus tag: VYA_03240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014230728.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphatase PAP2 family protein
translation: MRTIETIALPIATIAKFDVAFSHICLRHRFSLPVANVSKGISHSGDGHLYLVIGLLAWLLDKQHGQWFLWVGLVAFAMELPIYWVLKNSVKRRRPKELSEHLPAFITPSDRYSLPSGHTAAGFVMASVIHHFYPELGAFAFLWASLIGLSRILLGVHFFTDIIVGAVLGSLCASFAIDIVGVSG
SIO_010081: VA249_RS01695
subclass of: SO_0000673
so part of: VA249_RS01695
location: 347327..347881
location: region:347327-347881:1
so has part: feature:347327-347881:1:exon

WP_128811737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:347327-347881:1:exon

VA249_RS01700
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01700
old locus tag: VYA_03250
so part of: sequence
location: 347878..348924
location: region:347878-348924:1
so has part: feature:347878-348924:1:exon
subclass of: SO_0000010

position:347878:1
position: 347878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348924:1
position: 348924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347878-348924:1:exon

VA249_RS01700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01700
old locus tag: VYA_03250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009698845.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family protein
translation: MKILYGVQGTGNGHIARARAMGEAFKMHNVQVDFLFSGRAPEKYFSMEAFGDYQTRRGFTFETKKGSVSYTKTALSNNLMQFFKEVTQLDLSSYDLVINDFEPVSAWAARKQKKPCIGISHQNAFRYSVPLKGANWIDKSVIEYFAPAQHHIGLHWYHYDQPILPPIIHTSSEVSDKGDFVLVYLPFEAIEDITDLLFHFNQQPFICYHPDVMESSQVENIELQPLSHGRFQHHLHRCRGVIANGGFELPSEALSLGKKLLLKPLAGQFEQQSNVATLEQLGLATSMDSLDISSVRQWLRDSHVESVTYPDVAKAIAHWVVEGDWNTQAKLADKLWQQVDFPSYVSHL
SIO_010081: VA249_RS01700
subclass of: SO_0000673
so part of: VA249_RS01700
location: 347878..348924
location: region:347878-348924:1
so has part: feature:347878-348924:1:exon

WP_221068594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:347878-348924:1:exon

VA249_RS01705
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: calR
locus tag: VA249_RS01705
old locus tag: VYA_03260
so part of: sequence
location: 349409..350368
location: region:349409-350368:1
so has part: feature:349409-350368:1:exon
subclass of: SO_0000010

position:349409:1
position: 349409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350368:1
position: 350368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349409-350368:1:exon

VA249_RS01705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: calR
locus tag: VA249_RS01705
old locus tag: VYA_03260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005459522.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator CalR
translation: MLEKKDAMSAIASYRMESTLRGVDLNLLTVFDAVMQEQNITRAAHNLGMSQPAVSNAVARLKVMFNDELFMRQGRGIQPTQRARQLFGPVRQALQLIRNELPSSVFQPESSTRLFKLAICSPCDMRFAPRIMANINEQAPSVQLHLDAEFDRLLSERMRYQEIDFVIDYARFDDQGFSSTEIFKDELVVIASKTHPRIQGGVSAEQLINEKHAKLSRVHGQRSFSEQAYREFDCQAAYEGSSLSNLLYVVSQSELVTIAPRWMAENAVNSSQLQILDLPFENKEISGYLSWHESSEKDKGHIWLRDQLMITCGEVVALK
SIO_010081: VA249_RS01705
subclass of: SO_0000673
so part of: VA249_RS01705
location: 349409..350368
location: region:349409-350368:1
so has part: feature:349409-350368:1:exon

WP_221068595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349409-350368:1:exon

VA249_RS01710
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01710
old locus tag: VYA_03270
so part of: sequence
location: 350667..352475
location: region:350667-352475:1
so has part: feature:350667-352475:1:exon
subclass of: SO_0000010

position:350667:1
position: 350667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352475:1
position: 352475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350667-352475:1:exon

VA249_RS01710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01710
old locus tag: VYA_03270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017633471.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: long-chain fatty acid--CoA ligase
translation: MAKLDFHIVKRIREQIAKGSTRVALKHKVGDTWQGITWEQFGQQVDALSLALLAQGLGVQDKIGIFSNNMPQWTIADFAALQLRGVTVPIYPTNTAAQSAYIIDNADVKVLFVGEQPQFDAAVSIFDQCRQLELIVAMSDEIELGEYSFAISWNDFMAKGDESRHVELETRLEQAQEDDLLTLIYTSGTTGQPKGVMLDYANISAQLEGHDQRLSLTEDDVSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIFSAIHEKVSRAPFHRKIMFTWAVNMGAKMAACHQEKREPSLALRKSYALADKIVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDQCFDPSSIGMAMPGAQVKIGENNEILVRGPMVMRGYYKMPEETEKTFDEHGFLKTGDAGYIDENGNLFITDRIKELMKTSNGKYIAPQVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIAYHDRVELIKHHQIVEMLEKRVNDLQKELAKFEQVKKFKLLPKAFSMDDGELTPTQKLRRKVINDKYQDEIEEMYNEKSDKK
SIO_010081: VA249_RS01710
subclass of: SO_0000673
so part of: VA249_RS01710
location: 350667..352475
location: region:350667-352475:1
so has part: feature:350667-352475:1:exon

WP_221068596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350667-352475:1:exon

VA249_RS01715
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01715
old locus tag: VYA_03280
so part of: sequence
location: 352921..354645
location: region:352921-354645:1
so has part: feature:352921-354645:1:exon
subclass of: SO_0000010

position:352921:1
position: 352921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354645:1
position: 354645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352921-354645:1:exon

VA249_RS01715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01715
old locus tag: VYA_03280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020193967.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetolactate synthase 3 large subunit
translation: MTAMLSGAEMVVQSLIEENVEQIFGYPGGSVLDIYDALHAKTDQIKHVLVRHEQAATHMADGYARATGKPGVVLVCSGPGATNTITGIATAYMDSIPMIVISGNVPNNLIGNDAFQECDIVGVSRPVVKHSFLVKKAEDIPETIKKAFYISTTGRPGPVVIDLPKDILNPQIKLPYEYPESILMRSYKPTTSGHKGQIKKALKALVEAKKPVLYIGGGAVISGAHEYIQVLSDQLNLPVVSTLMGLGAFPGTHKHSLGMLGMHGTYEANMAMHEADLIFGIGVRFDDRTTNNLEKYCPNAKIMHIDIDPSSISKNVKVDLPIVGSAEKVLEHMVGLLNDQGLANDRAALDSWWDAIQVWRDRQCLSYEKSEERIKPQQVIETLHKLTNGDAYVASDVGQHQMFAALYYPFNKPRRWINSGGLGTMGFGLPAGMGVKFAMPEEEVVVVTGDGSIQMNIQELSTAMQYDIPVKIINLNNRFLGMVKQWQDIIYQGRHSNSYMSSVPDFAAIAEAYGHVGIRIETPDQLEAGLQKALDMKDRLVFVDINVDETEHVYPMQIKGEGMDKMWLSKTERT
SIO_010081: VA249_RS01715
subclass of: SO_0000673
so part of: VA249_RS01715
location: 352921..354645
location: region:352921-354645:1
so has part: feature:352921-354645:1:exon

WP_221068597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352921-354645:1:exon

VA249_RS01720
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: ilvN
locus tag: VA249_RS01720
old locus tag: VYA_03290
so part of: sequence
location: 354647..355141
location: region:354647-355141:1
so has part: feature:354647-355141:1:exon
subclass of: SO_0000010

position:354647:1
position: 354647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355141:1
position: 355141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354647-355141:1:exon

VA249_RS01720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: ilvN
locus tag: VA249_RS01720
old locus tag: VYA_03290
EC number: 2.2.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005379697.1
GO function: GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
GO process: GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetolactate synthase small subunit
translation: MRHIISLLLENQPGALSRVVGLFSQRGYNIESLTVSPTDDETLSRLNITTTSDEMQLEQIQKQLNKLIDVLKVQEVTEFDHIERELMMVKVKASGFARAEVKRTADIFRGQIVDVTSAQYTVQLAGTSEKLDAFIQAISEVTDVVEVARSGVVGIARGERALKP
SIO_010081: VA249_RS01720
subclass of: SO_0000673
so part of: VA249_RS01720
location: 354647..355141
location: region:354647-355141:1
so has part: feature:354647-355141:1:exon

WP_128811733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354647-355141:1:exon

VA249_RS01725
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01725
old locus tag: VYA_03300
so part of: sequence
location: 355380..357266
location: region:355380-357266:1
so has part: feature:355380-357266:1:exon
subclass of: SO_0000010

position:355380:1
position: 355380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357266:1
position: 357266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355380-357266:1:exon

VA249_RS01725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01725
old locus tag: VYA_03300
EC number: 2.7.7.65
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005528628.1
GO function: GO:0009975 - cyclase activity [Evidence IEA]
GO process: GO:0009966 - regulation of signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diguanylate cyclase
translation: MKIRKLIGSLLATTLVLSALISVYYYQKYQALLVNNIESTAKEALHQLSYSEREYSNIKDQMVSISDLLAHSQSLYDYVREPSDTHRLILQKVWRSVAVNQKWYTQIRFLDSAGKEKIKIKYDFSSGIALATPISKLEDKSPRAYFQDATALANGKIGSSGIELERESGEIVYPYRPSVRLVTPVAIDERRVGYLVLNVDIEYLSARLNYSPVRDFNIELINQQGFYVASVHQDKLYGNIIPDRSRFNLGLIHPKVWQKLGSNKMGYEYDGKRLVVFNTINFVPGESLYLVVDLADTQLSERAHDEIENLVQEASLMLSFVLVFALPITALVWHYRRFSVESKLARAALDGMTAVMISDPSHRIIMVNQEFENMMGYASGRVRGWNAHQLIFLPVDIENILAIWNKLSVEQVWEGEVRCRTKLNHVFTAIMRIQAIMAKPGKVSYYITSLVDISERKQLEEKLRNLSEKDSLTGLWNRRKFEEQLLFHANVIERYPDMQSTCLALIDIDHFKKVNDQLGHDEGDKVIRQVGETLLNGVRNTDIVARVGGEEFAVIMPHTTMNEAKIVLNRLRIAVELSNELPVTISVGYSDLTADRTHSYKCADIALYDSKNAGRNRISVCHSFDDTA
SIO_010081: VA249_RS01725
subclass of: SO_0000673
so part of: VA249_RS01725
location: 355380..357266
location: region:355380-357266:1
so has part: feature:355380-357266:1:exon

WP_221068598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355380-357266:1:exon

VA249_RS01730
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01730
old locus tag: VYA_03310
so part of: sequence
location: complement(357347..358018)
location: region:357347-358018:-1
so has part: feature:357347-358018:-1:exon
subclass of: SO_0000010

position:357347:-1
position: 357347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358018:-1
position: 358018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357347-358018:-1:exon

VA249_RS01730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01730
old locus tag: VYA_03310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017073072.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MRQLVSSPTLTDKVSKMICQDILTGELQPGQKLVVADLKEKYNVGASPIREALALLSWSKYVILEPQKGCWVAPVCKKELNDLYESLRVISSVLLKKAILAGDENWELEVLTSYHKLSRLHFNETFCWKEWEDKHHQFHASLLEGADSKNMFEFFTDLINQIKRYRFYAMQTLNSTQDDLFNIQEHEMIMKLVLAKNSEEASELLDKHLLNTMQRIENILEIA
SIO_010081: VA249_RS01730
subclass of: SO_0000673
so part of: VA249_RS01730
location: complement(357347..358018)
location: region:357347-358018:-1
so has part: feature:357347-358018:-1:exon

WP_128811732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357347-358018:-1:exon

VA249_RS01735
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: pykF
locus tag: VA249_RS01735
old locus tag: VYA_03320
so part of: sequence
location: complement(358170..359582)
location: region:358170-359582:-1
so has part: feature:358170-359582:-1:exon
subclass of: SO_0000010

position:358170:-1
position: 358170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359582:-1
position: 359582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358170-359582:-1:exon

VA249_RS01735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: pykF
locus tag: VA249_RS01735
old locus tag: VYA_03320
EC number: 2.7.1.40
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008989806.1
GO function: GO:0004743 - pyruvate kinase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyruvate kinase PykF
translation: MKKTKIVCTIGPKTESVEKLTELVNAGMNVMRLNFSHGDYAEHGTRIANFREVMKNTGKQLAILLDTKGPEIRTIKLEGGNDVDLVAGQEFTFTTDISVVGNKDKVAVTYAGFANDLNAGNTILVDDGLIEMEVISTTETEVKCKVLNNGALGENKGVNLPGVSVNLPALSEKDKNDLKFGCEQGVDFVAASFIRKASDVQEIREVLAANGGENIHIISKIENQEGVDNFDEILELSDGIMVARGDLGVEIPAEEVIFAQKMMIEKCNRARKMVITATQMLDSMINNPRPTRAEAGDVANAVMDGTDAVMLSGETAKGKYPVEAVTIMAQIAKRTDSVLKAELGSRLDSPRLRITEAVCKGAVDTAEKLAAPLIVVATEGGKSARSVRKYFPTANILALTTNTKTAAQLVLTKGVTPVVVDSIENTDAFYVAGKELALESGLGNKGDIVVMVSGALVASGTTNTASVHVL
SIO_010081: VA249_RS01735
subclass of: SO_0000673
so part of: VA249_RS01735
location: complement(358170..359582)
location: region:358170-359582:-1
so has part: feature:358170-359582:-1:exon

WP_221068599.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358170-359582:-1:exon

VA249_RS01740
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01740
old locus tag: VYA_03330
so part of: sequence
location: 360015..360776
location: region:360015-360776:1
so has part: feature:360015-360776:1:exon
subclass of: SO_0000010

position:360015:1
position: 360015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360776:1
position: 360776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360015-360776:1:exon

VA249_RS01740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01740
old locus tag: VYA_03330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014230735.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DeoR family transcriptional regulator
translation: MSKRNTQLRRHAISNLVNELGEVSVDELAQKFETSEVTIRKDLASLEKNGQLLRRYGGAIAIPTEVIHEEMSPVVSTRKLKLAKSAAALIRDHNRIVIDSGSTTAALIQQLNDKRGLVVMTNSLHVANALNELESEPTLLMTGGTWDTHSESFQGKVAESVLRAYDFDQLFIGADGVDLERGTTTFNELVGLSKVMAEVSREVIVMIESEKVGRKIPNLELAWQQIDVLITDADLQPEHKEQIEEYGVRVICA
SIO_010081: VA249_RS01740
subclass of: SO_0000673
so part of: VA249_RS01740
location: 360015..360776
location: region:360015-360776:1
so has part: feature:360015-360776:1:exon

WP_221068600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360015-360776:1:exon

VA249_RS01745
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: glmS
locus tag: VA249_RS01745
old locus tag: VYA_03340
so part of: sequence
location: 360959..362791
location: region:360959-362791:1
so has part: feature:360959-362791:1:exon
subclass of: SO_0000010

position:360959:1
position: 360959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362791:1
position: 362791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360959-362791:1:exon

VA249_RS01745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: glmS
locus tag: VA249_RS01745
old locus tag: VYA_03340
EC number: 2.6.1.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019830207.1
GO function: GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO process: GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine--fructose-6-phosphate transaminase (isomerizing)
translation: MCGIVGAVAQRDVAEILVEGLRRLEYRGYDSAGVAIVDGDANLTRIRRLGKVQELADAVEQAKVIGGTGIAHTRWATHGEPSEVNAHPHMSGDIAVVHNGIIENHESLRTLLQSRGYVFESQTDTEVIAHLVEWELRTSETLLEALQKTAKQLEGAYGTVVMDRKDPSRIVVARSGSPIVIGFGVGENFLASDQLALLNVTRRFMYLEEGDVAEITRREVAVFDATGERVEREIAESNAEHDAGDKGQYRHFMQKEIYEQPTALINTMEGRITADSVVTEAIGVNAAEILSKVEHVQIVACGTSYNAGMTARYWFEDIAGVSCDVEIASEFRYRKFVTRPNSLLITLSQSGETADTLAALRLAKEKGYMAAMTICNVAGSSLVRESDFAFMTRAGVEIGVASTKAFTTQLSALLMLVTALGKQQNRISKEKEKEIVEALHALPKQINAALSFEKEIEELATDFADKHHTLFLGRGEFYPIAMEASLKLKEISYIHAEAYAAGELKHGPLALIDADMPVVVVAPSNDLLEKLKSNVEEVRARGGLLYVFADEDAGFEADETMKIIKMPHVSEITAAIYYTIPMQLLSYYVALIKGTDVDQPRNLAKAVTVE
SIO_010081: VA249_RS01745
subclass of: SO_0000673
so part of: VA249_RS01745
location: 360959..362791
location: region:360959-362791:1
so has part: feature:360959-362791:1:exon

WP_221068601.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360959-362791:1:exon

VA249_RS01750
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01750
old locus tag: VYA_03350
so part of: sequence
location: 363069..363353
location: region:363069-363353:1
so has part: feature:363069-363353:1:exon
subclass of: SO_0000010

position:363069:1
position: 363069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363353:1
position: 363353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363069-363353:1:exon

VA249_RS01750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01750
old locus tag: VYA_03350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010445681.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-fructose-6-phosphate amidotransferase
translation: MAYKHYIRELLGLAVIISVVFGVLGILLDIFALTAWYEHQNSIANTFFHESFYFVAFLIPPFFLWRIINRPTLVSATQEYKARALELERAVSTH
SIO_010081: VA249_RS01750
subclass of: SO_0000673
so part of: VA249_RS01750
location: 363069..363353
location: region:363069-363353:1
so has part: feature:363069-363353:1:exon

WP_221068602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363069-363353:1:exon

VA249_RS01755
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01755
old locus tag: VYA_03360
so part of: sequence
location: complement(364102..364647)
location: region:364102-364647:-1
so has part: feature:364102-364647:-1:exon
subclass of: SO_0000010

position:364102:-1
position: 364102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364647:-1
position: 364647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364102-364647:-1:exon

VA249_RS01755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01755
old locus tag: VYA_03360
inference: COORDINATES: protein motif:HMM:NF024242.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MILHKHKLVSSNSSSRLIANYIEATNKIKRIKLDNDELILKSLSFYITDAINKNKDLALSDGIQRKNKQTSIKNKVESLVNSDIKNKWNVGNISSSLFMSKSKLYRLLKLDNTCLSSFVLDIRLKNAKNLLLSTDLTISEIAISSGFNSSSYFCKRFKENFYCSPSDFRTISKKIRTKQTL
SIO_010081: VA249_RS01755
subclass of: SO_0000673
so part of: VA249_RS01755
location: complement(364102..364647)
location: region:364102-364647:-1
so has part: feature:364102-364647:-1:exon

WP_221068603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364102-364647:-1:exon

VA249_RS01760
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01760
old locus tag: VYA_03370
so part of: sequence
location: complement(364823..365584)
location: region:364823-365584:-1
so has part: feature:364823-365584:-1:exon
subclass of: SO_0000010

position:364823:-1
position: 364823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365584:-1
position: 365584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364823-365584:-1:exon

VA249_RS01760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01760
old locus tag: VYA_03370
inference: COORDINATES: protein motif:HMM:NF012772.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EAL domain-containing protein
translation: MYNFVNRRDGVIVTKGQQSAVIEFLFQPICNLSESTTQFYEILSRVTSQTGETYNSQDFFENIGDDFIKELCLNQIISSKLLKIESTVSINITLSCLSDRRFVEEILSFNSRNIALEINELNCYSSSNDINSNISLLQENGIMIWLDDYHENNECANLSLGKIQWDMIKIDKRFLHYNGDDLMAIQALSYVLMPFTKQGLIFEGIETATHSSLVKSTGAFGQGFFYSIPQKWHGEILRGKYEHNIKKNIINSI
SIO_010081: VA249_RS01760
subclass of: SO_0000673
so part of: VA249_RS01760
location: complement(364823..365584)
location: region:364823-365584:-1
so has part: feature:364823-365584:-1:exon

WP_221068604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364823-365584:-1:exon

VA249_RS01765
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01765
old locus tag: VYA_03380
so part of: sequence
location: 367105..367740
location: region:367105-367740:1
so has part: feature:367105-367740:1:exon
subclass of: SO_0000010

position:367105:1
position: 367105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367740:1
position: 367740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367105-367740:1:exon

VA249_RS01765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01765
old locus tag: VYA_03380
inference: COORDINATES: protein motif:HMM:NF026010.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSCVRRFKFTEKKLSSLSNNKVEQVVRFYDTEMDGLIAIQRPSGVLSYAVYKKPKGAKSPVTVLMGKVGTVSLSHAREQAQEHISTILKGDNPNLMMRERNQNGLTLQKALDEYCELRKDRVNANTLLQYQNAIQNYSPMLLKKKIKDITFEEVSDVHKKISNGQCSWIQSNGKRYRMKKPSPSQANLWGGPCAPLSIMRWITGEGQIDGS
SIO_010081: VA249_RS01765
subclass of: SO_0000673
so part of: VA249_RS01765
location: 367105..367740
location: region:367105-367740:1
so has part: feature:367105-367740:1:exon

WP_221068605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367105-367740:1:exon

VA249_RS01770
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01770
old locus tag: VYA_03390
so part of: sequence
location: 367680..368513
location: region:367680-368513:1
so has part: feature:367680-368513:1:exon
subclass of: SO_0000010

position:367680:1
position: 367680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368513:1
position: 368513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367680-368513:1:exon

VA249_RS01770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01770
old locus tag: VYA_03390
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MRAIINYAMDNWRGADRRQLITENPMRALSVNRLWNKEYPKSTRIHESQLERFFDTLEEFRTRSVRSQTEIAISYALEVALFTGLRATEVISLTKRQVDFKEGVFYLPKTKNGDPLVLPLTPHVESILFARYQSVPENCDFLFPSANYRQHIRESRKTIINLKRLSASDGQEALSLNFHDMRRTFASLAETCNVGKYMIKRLMNHRSGGGGCDVTGDYMHFSHKDILKKSIEIERYILKQGRQLSDNESDNLNDELRRVLDELDDEAKRSWLALMNK
SIO_010081: VA249_RS01770
subclass of: SO_0000673
so part of: VA249_RS01770
location: 367680..368513
location: region:367680-368513:1
so has part: feature:367680-368513:1:exon

WP_221068606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367680-368513:1:exon

VA249_RS01775
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01775
old locus tag: VYA_03410
so part of: sequence
location: complement(369645..370136)
location: region:369645-370136:-1
so has part: feature:369645-370136:-1:exon
subclass of: SO_0000010

position:369645:-1
position: 369645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370136:-1
position: 370136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369645-370136:-1:exon

VA249_RS01775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01775
old locus tag: VYA_03410
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKLTLLFTTLAFSTAIQASELWYTVMGGCPVPHYDDAESPSYESWLCDRPNGIFSKLSLDYNSQGRLEIQYHSGSKMCQDFEKHKTYLVNGTPVRHTLYCRPPFDGGGLGMIYMDYAVPTTKKGREFVANEMRKGGSIKYGDYYFRVDFFKRYYDKASMQAL
SIO_010081: VA249_RS01775
subclass of: SO_0000673
so part of: VA249_RS01775
location: complement(369645..370136)
location: region:369645-370136:-1
so has part: feature:369645-370136:-1:exon

WP_221068607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:369645-370136:-1:exon

VA249_RS01780
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01780
old locus tag: VYA_03420
so part of: sequence
location: complement(370182..370538)
location: region:370182-370538:-1
so has part: feature:370182-370538:-1:exon
subclass of: SO_0000010

position:370182:-1
position: 370182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370538:-1
position: 370538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370182-370538:-1:exon

VA249_RS01780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01780
old locus tag: VYA_03420
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYKRALLAAAFLPFIAQASLPNMICKHDQSGTVNWGAIARFTGSSEVKLEVSVNRGTAVIMDQDKFLFSQPYVCHFEKIGESIHQCNDIILTFGGRTLTVYTFFNGNSAINTTTCEKV
SIO_010081: VA249_RS01780
subclass of: SO_0000673
so part of: VA249_RS01780
location: complement(370182..370538)
location: region:370182-370538:-1
so has part: feature:370182-370538:-1:exon

WP_221068608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:370182-370538:-1:exon

VA249_RS01785
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01785
old locus tag: VYA_03430
so part of: sequence
location: 371368..372777
location: region:371368-372777:1
so has part: feature:371368-372777:1:exon
subclass of: SO_0000010

position:371368:1
position: 371368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372777:1
position: 372777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371368-372777:1:exon

VA249_RS01785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01785
old locus tag: VYA_03430
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MGCKRCFKFTEKRLSELSDYLSKTKVRIYDTEVSGLVVIQQPSGSLTYAVYKKPKGANRPVTVLIGKVGAILLSQVREQAQEHIVAMLKGENPNRLARERNQSGLTLEKALAEYGELKKKDGVDSSTFKQYQRDIHNYSPLILKKTIKDITFEDIIEIHKKITNGQCSWIQPDGKCYSMRKPSPSQADAWGRAMRAVINYAMNNWRGADRRQLILENPVRVLSVNRLWNKVSGKESRVHDNQLERFFDTLNVFRSQSERSAVEIAITYALELALFTGLRLMEIFTLTKGQVDFDEGKLYLPNTKNSHPLALPLTPHVALILRLRFDAVPDDCDFLFPSAKHDKHICNPRKTIANLKCLSAINGQEPLNLDFHDMRRTFASLAEACNVGKYMIKRLMNHRSGGGGDVTGDYMHFSHQDLLKKSTEIERYILKKGGLLCEKDSESLNKDLRRIFDELDDDAKRNWLALMAK
SIO_010081: VA249_RS01785
subclass of: SO_0000673
so part of: VA249_RS01785
location: 371368..372777
location: region:371368-372777:1
so has part: feature:371368-372777:1:exon

WP_221068609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371368-372777:1:exon

VA249_RS01790
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01790
old locus tag: VYA_03440
so part of: sequence
location: complement(372839..372991)
location: region:372839-372991:-1
so has part: feature:372839-372991:-1:exon
subclass of: SO_0000010

position:372839:-1
position: 372839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372991:-1
position: 372991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372839-372991:-1:exon

VA249_RS01790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01790
old locus tag: VYA_03440
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSIEPLRLLAKRNGYTILIIDEETGAVQRWFPAKDYTEEDALEEYRAKYL
SIO_010081: VA249_RS01790
subclass of: SO_0000673
so part of: VA249_RS01790
location: complement(372839..372991)
location: region:372839-372991:-1
so has part: feature:372839-372991:-1:exon

WP_221068610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:372839-372991:-1:exon

VA249_RS01795
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01795
old locus tag: VYA_03450
so part of: sequence
location: 374411..375424
location: region:374411-375424:1
so has part: feature:374411-375424:1:exon
subclass of: SO_0000010

position:374411:1
position: 374411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375424:1
position: 375424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374411-375424:1:exon

VA249_RS01795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01795
old locus tag: VYA_03450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014231390.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: integrase domain-containing protein
translation: MRRRQYIGHLPKGPRNFTKPNFNLASKDMVKALINASYEQQSGKNSNTHRARRPAIKQFITFIKDTTSIKRLNDIEKQHVYRFGEFLKNCADEELMSPVTARDYLSHVNRALAQARGDEACVVNATKDLDFNPKPGIATVDKSVSDALHEKVLAQVSPEVGFVMQLQRALGIRFREGALFDASRVLKEIRKGLVPMLNLGTKGGQPRALPEITDEKYQLLLRVEQFQKSVGHISLIPPKQSFKAFQTEAWRQTKQADENYLSHGERKYWACETYFQEMGVRCPVQAGVAHGKAHYKYIANVLDISEAEAKKRDHATRLRISKLLGHHRVTITNAYLG
SIO_010081: VA249_RS01795
subclass of: SO_0000673
so part of: VA249_RS01795
location: 374411..375424
location: region:374411-375424:1
so has part: feature:374411-375424:1:exon

WP_221068611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374411-375424:1:exon

VA249_RS01800
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01800
old locus tag: VYA_03460
so part of: sequence
location: 375434..375733
location: region:375434-375733:1
so has part: feature:375434-375733:1:exon
subclass of: SO_0000010

position:375434:1
position: 375434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375733:1
position: 375733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375434-375733:1:exon

VA249_RS01800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01800
old locus tag: VYA_03460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017243613.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNAHTKKQVLTIMAPYHKRGIPYRKKQVKRLLMILDDIFKHEPYVAEQLERVGRRQISGYWERTKHESAQVRKEKFAILKLFFEMANLKGGVPRPKLWE
SIO_010081: VA249_RS01800
subclass of: SO_0000673
so part of: VA249_RS01800
location: 375434..375733
location: region:375434-375733:1
so has part: feature:375434-375733:1:exon

WP_221068612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:375434-375733:1:exon

VA249_RS01805
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01805
old locus tag: VYA_03470
so part of: sequence
location: 375905..376105
location: region:375905-376105:1
so has part: feature:375905-376105:1:exon
subclass of: SO_0000010

position:375905:1
position: 375905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376105:1
position: 376105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375905-376105:1:exon

VA249_RS01805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01805
old locus tag: VYA_03470
inference: COORDINATES: protein motif:HMM:NF024139.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MCPALSILDSQLYLTRKEVAKLLKVSPGTLANWATDGKGPQFVRLEGKVCYPVDELKVYLNQNGLM
SIO_010081: VA249_RS01805
subclass of: SO_0000673
so part of: VA249_RS01805
location: 375905..376105
location: region:375905-376105:1
so has part: feature:375905-376105:1:exon

WP_221068613.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:375905-376105:1:exon

VA249_RS01810
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01810
old locus tag: VYA_t00110
so part of: sequence
location: complement(376309..376384)
location: region:376309-376384:-1
so has part: feature:376309-376384:-1:exon
subclass of: SO_0000663

position:376309:-1
position: 376309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376384:-1
position: 376384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376309-376384:-1:exon

VA249_RS01810
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1074311
locus tag: VA249_RS01810
old locus tag: VYA_t00110
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(376349..376351),aa:Ile,seq:cat)
SIO_010081: VA249_RS01810
subclass of: SO_0000673
so part of: VA249_RS01810
location: complement(376309..376384)
location: region:376309-376384:-1
so has part: feature:376309-376384:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:376309-376384:-1:exon

VA249_RS01815
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rpoD
locus tag: VA249_RS01815
old locus tag: VYA_03480
so part of: sequence
location: complement(376529..378397)
location: region:376529-378397:-1
so has part: feature:376529-378397:-1:exon
subclass of: SO_0000010

position:376529:-1
position: 376529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378397:-1
position: 378397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376529-378397:-1:exon

VA249_RS01815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rpoD
locus tag: VA249_RS01815
old locus tag: VYA_03480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017062924.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor RpoD
translation: MDQNPQSQLKSLVIKGKEQGYLTYAEVNDHLPAEIVDSEQVEDIIQMINDMGIKVVETAPDADDLALNDDTNITDEDAAEAAAAALSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIAKRIEEGINQVQSSVAEYPGTIPYILEQFDKVQAEELRLTDLISGFVDPDAEDTAAPTATHIGSELSETDLEDEDEEDVEDDDEDSDDDSESETEEDVGIDPELALEKFNQLRSTYQNLQLAINEHGYESPKATVANELMLDVFKEFRLTPKQFDHLVNELRTAMDRVRTQERLIMKAAVEYGKMPKKSFIALFTGNESNDAWLDEVLASDKPYAEKIKRSEEEIRRSIMKLKMIEEETSLTVQSIKDISRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPLPEELAERMQMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATATSLKMATKDVLAGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSETLRSFLDE
SIO_010081: VA249_RS01815
subclass of: SO_0000673
so part of: VA249_RS01815
location: complement(376529..378397)
location: region:376529-378397:-1
so has part: feature:376529-378397:-1:exon

WP_211915445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376529-378397:-1:exon

VA249_RS01820
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: dnaG
locus tag: VA249_RS01820
old locus tag: VYA_03490
so part of: sequence
location: complement(378497..380257)
location: region:378497-380257:-1
so has part: feature:378497-380257:-1:exon
subclass of: SO_0000010

position:378497:-1
position: 378497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380257:-1
position: 380257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378497-380257:-1:exon

VA249_RS01820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: dnaG
locus tag: VA249_RS01820
old locus tag: VYA_03490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010434609.1
GO function: GO:0003896 - DNA primase activity [Evidence IEA]
GO process: GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA primase
translation: MAGHIPRSFIDDLLARLDIVDIIDARVKLKKKGKNYGACCPFHNEKTPSFSVSQEKQFYHCFGCGVHGNAIDFVMEFERLDFVEAIEELASYLGLDVPREQRSGGGQSQSGPQASSSEKRSLYDLMGSIGQFYRNQLKQPASKVAIEYLKNRGLSGEIVQKFGIGYVADEWDLVRKNFGQQKDNQDMLVTGGMLIENEKGNRYDRFRGRIMFPIRDRRGRVIGFGGRVLGDGTPKYLNSPETPIFHKGKELYGLYEVLQAYREPPRILVVEGYMDVVALAQYGVDYSVASLGTSTTGDHIQMLFRQTNTVVCCYDGDRAGKEAAWRALENALQYLKTGNTLKFLFLPDGEDPDSYVRKYGKAALEQQIEHATPLSSYLFDNLIELHQINLGNHEGKSALRAYASALIDKIPDPYFQELLEKLLDERTGFDNNLRQARRKNTDTRPQPHKEIKRTPMREVIALLIQNPSYAQMVPDLSSVKELSIPGLSLFVDVLDKCQSHPHINTGQLLEHWRNSQNETLLSRLASWDIPLDEDNQEEVFFDSLDKIIAQCVERQIENLQAKARSVGLSTEEKRELQDLIMRDLKA
SIO_010081: VA249_RS01820
subclass of: SO_0000673
so part of: VA249_RS01820
location: complement(378497..380257)
location: region:378497-380257:-1
so has part: feature:378497-380257:-1:exon

WP_221068614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378497-380257:-1:exon

VA249_RS01825
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01825
old locus tag: VYA_03500
so part of: sequence
location: complement(380405..380848)
location: region:380405-380848:-1
so has part: feature:380405-380848:-1:exon
subclass of: SO_0000010

position:380405:-1
position: 380405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380848:-1
position: 380848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380405-380848:-1:exon

VA249_RS01825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01825
old locus tag: VYA_03500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005389489.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GatB/YqeY domain-containing protein
translation: MALIDQLKEEQKLAMKAKDKLRLGTIRLALSAIKQREVDEQITLSDDDIIAVLTKMVKQRRDSVTQYEAAGRQDLADVEQAEITVLEDFMPQPLTDEEVASLIEKAIVESGAAGMQDMGKVMGVLKPQIQGRTDMGKVSGLVRAKLA
SIO_010081: VA249_RS01825
subclass of: SO_0000673
so part of: VA249_RS01825
location: complement(380405..380848)
location: region:380405-380848:-1
so has part: feature:380405-380848:-1:exon

WP_211915443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380405-380848:-1:exon

VA249_RS01830
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rpsU
locus tag: VA249_RS01830
old locus tag: VYA_03510
so part of: sequence
location: complement(380877..381092)
location: region:380877-381092:-1
so has part: feature:380877-381092:-1:exon
subclass of: SO_0000010

position:380877:-1
position: 380877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381092:-1
position: 381092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380877-381092:-1:exon

VA249_RS01830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rpsU
locus tag: VA249_RS01830
old locus tag: VYA_03510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011235429.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S21
translation: MPVVKVRENEPFDVALRRFKRSCEKAGILSEVRRREHYEKPTTVRKRAKAAAQKRHAKKLARENARRVRLY
SIO_010081: VA249_RS01830
subclass of: SO_0000673
so part of: VA249_RS01830
location: complement(380877..381092)
location: region:380877-381092:-1
so has part: feature:380877-381092:-1:exon

WP_001145625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380877-381092:-1:exon

VA249_RS01835
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: tsaD
locus tag: VA249_RS01835
old locus tag: VYA_03520
so part of: sequence
location: 381323..382339
location: region:381323-382339:1
so has part: feature:381323-382339:1:exon
subclass of: SO_0000010

position:381323:1
position: 381323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382339:1
position: 382339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381323-382339:1:exon

VA249_RS01835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: tsaD
locus tag: VA249_RS01835
old locus tag: VYA_03520
EC number: 2.3.1.234
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005528787.1
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
translation: MRIIGIETSCDETGIAIYDDEKGLLSHQLYSQIKLHADYGGVVPELASRDHVKKTIPLIKEALKEANLTPKDIDGVAYTAGPGLVGALLVGATIGRSIAYAWGVPAVPVHHMEGHLLAPMLEDNPPPFPFVAVLVSGGHSMMVEVKGIGEYKILGESIDDAAGEAFDKTAKLMGLDYPGGPLLSKLAEKGTPGRFKFPRPMTNVPGLDMSFSGLKTFTANTIAANGDDEQTRADIAYAFEDAVCATLAIKCKRALEQTGMKRIVIAGGVSANRRLRAELEKLAKKVGGEVYYPRTEFCTDNGAMIAYAGMQRLKNGEVSDMAVEARPRWPIDQLKPIA
SIO_010081: VA249_RS01835
subclass of: SO_0000673
so part of: VA249_RS01835
location: 381323..382339
location: region:381323-382339:1
so has part: feature:381323-382339:1:exon

WP_221069780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381323-382339:1:exon

VA249_RS01840
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01840
old locus tag: VYA_03530
so part of: sequence
location: 382459..383277
location: region:382459-383277:1
so has part: feature:382459-383277:1:exon
subclass of: SO_0000010

position:382459:1
position: 382459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383277:1
position: 383277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382459-383277:1:exon

VA249_RS01840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01840
old locus tag: VYA_03530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020193983.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MNKFEIEGQSLAYLDKGKGPVLLFGHSYLWDSQMWAPQIEVLSQSYRCIVPDLWAHGESDNAPRSMRSLVDYAQHMLALMDHLEIEQFSIVGLSVGGMWGAELTSQAPQRVKSLVLMDTFIGLEPEVAHKKYFTMLDTIAELQSVPTSIVEAVTPLFFANNAEQINPELVASFKQSLESLHGERAVEVARMGRMVFGRRDVIEDSEMFTLPTLIAVGREDKPRPVFESYLMSDCITGSKLVEIPQAGHISSLEQSEFVNQMLMDFLNSVHAQ
SIO_010081: VA249_RS01840
subclass of: SO_0000673
so part of: VA249_RS01840
location: 382459..383277
location: region:382459-383277:1
so has part: feature:382459-383277:1:exon

WP_221068615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382459-383277:1:exon

VA249_RS01845
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: plsY
locus tag: VA249_RS01845
old locus tag: VYA_03540
so part of: sequence
location: complement(383310..383921)
location: region:383310-383921:-1
so has part: feature:383310-383921:-1:exon
subclass of: SO_0000010

position:383310:-1
position: 383310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383921:-1
position: 383921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383310-383921:-1:exon

VA249_RS01845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: plsY
locus tag: VA249_RS01845
old locus tag: VYA_03540
EC number: 2.3.1.15
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005497033.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO process: GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol-3-phosphate 1-O-acyltransferase PlsY
translation: MDALALIMTMAAYLLGSISSAVLICRLLKLPDPRDVGSHNPGATNVLRIGGKGAAASVLLCDMLKGTIPVWGGYFLGIDPIILGVIAIAACLGHMYPIFFHFKGGKGVATALGAIAPIGLDLTGLVMITWLLVAVLFRYSSLAALVTVLVTPFYAWMFKPQYTLPVAMLCCLIVFKHHQNIRRLLSGEEPKIGEKKLAEKNSA
SIO_010081: VA249_RS01845
subclass of: SO_0000673
so part of: VA249_RS01845
location: complement(383310..383921)
location: region:383310-383921:-1
so has part: feature:383310-383921:-1:exon

WP_128811710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:383310-383921:-1:exon

VA249_RS01850
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: folB
locus tag: VA249_RS01850
old locus tag: VYA_03550
so part of: sequence
location: 384188..384547
location: region:384188-384547:1
so has part: feature:384188-384547:1:exon
subclass of: SO_0000010

position:384188:1
position: 384188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384547:1
position: 384547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384188-384547:1:exon

VA249_RS01850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: folB
locus tag: VA249_RS01850
old locus tag: VYA_03550
EC number: 4.1.2.25
EC number: 5.1.99.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008222534.1
GO function: GO:0004150 - dihydroneopterin aldolase activity [Evidence IEA]
GO process: GO:0006760 - folic acid-containing compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase
translation: MALDKVFIEQLEVITTIGVYDWEQQIKQKLVLDIEMAHDNKPAGKSDDVQDALDYSQVSDAVLNHIENGRFLLVERVAEEVAELIMQRFSVPWVKIRLAKPGAVPQARAVGVVIERGQA
SIO_010081: VA249_RS01850
subclass of: SO_0000673
so part of: VA249_RS01850
location: 384188..384547
location: region:384188-384547:1
so has part: feature:384188-384547:1:exon

WP_221068616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:384188-384547:1:exon

VA249_RS01855
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: folK
locus tag: VA249_RS01855
old locus tag: VYA_03560
so part of: sequence
location: 384544..385026
location: region:384544-385026:1
so has part: feature:384544-385026:1:exon
subclass of: SO_0000010

position:384544:1
position: 384544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385026:1
position: 385026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384544-385026:1:exon

VA249_RS01855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: folK
locus tag: VA249_RS01855
old locus tag: VYA_03560
EC number: 2.7.6.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005387457.1
GO function: GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
GO process: GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
translation: MIKAYIGVGTNIDRERHAKIAYQELQQLGSDLCVSPIYECEPIGFSSSCFYNFVIGFSTHLSLDDLSERLREIEYKWGREEDAQKYQDRTLDLDIVLFGECISQQKPELPRSDIYKYPFVTKPLYDLEPHLVIPGDGRTIAEVWLAMQPVDSLKPVSFSF
SIO_010081: VA249_RS01855
subclass of: SO_0000673
so part of: VA249_RS01855
location: 384544..385026
location: region:384544-385026:1
so has part: feature:384544-385026:1:exon

WP_221068617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:384544-385026:1:exon

VA249_RS01860
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01860
old locus tag: VYA_03570
so part of: sequence
location: 385042..385845
location: region:385042-385845:1
so has part: feature:385042-385845:1:exon
subclass of: SO_0000010

position:385042:1
position: 385042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385845:1
position: 385845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385042-385845:1:exon

VA249_RS01860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01860
old locus tag: VYA_03570
EC number: 3.6.1.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004749097.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO process: GO:0016311 - dephosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: undecaprenyl-diphosphate phosphatase
translation: MSYFEAFILALIQGLTEFLPISSSAHLILPSAIFGWEDQGLAFDVAVHVGTLMAVVIYFRQEVITLFRALFGSIFKGERSKESKLAWMIVIATIPACVFGLLMKDIIEVYLRSAYVIATTTIIFGLLLWWVDKNAKLIADEYQTGWKKALFIGIAQALAMIPGTSRSGATITAALYLGFTREAAARFSFLMSIPIITLAGGYLGMKLVTSGEPVHVGFLLTGIVTSFISAYICIHFFLKMISRMGMTPFVIYRLILGFGLFAILLSA
SIO_010081: VA249_RS01860
subclass of: SO_0000673
so part of: VA249_RS01860
location: 385042..385845
location: region:385042-385845:1
so has part: feature:385042-385845:1:exon

WP_211915440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385042-385845:1:exon

VA249_RS01865
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01865
old locus tag: VYA_03580
so part of: sequence
location: complement(385931..387172)
location: region:385931-387172:-1
so has part: feature:385931-387172:-1:exon
subclass of: SO_0000010

position:385931:-1
position: 385931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387172:-1
position: 387172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385931-387172:-1:exon

VA249_RS01865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01865
old locus tag: VYA_03580
EC number: 2.7.7.72
EC number: 3.1.3.-
EC number: 3.1.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012126958.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004810 - CCA tRNA nucleotidyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0001680 - tRNA 3'-terminal CCA addition [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multifunctional CCA addition/repair protein
translation: MQVYLVGGAVRDHLLGIRSYDQDWVVVGSTPEIMLSQGYTAVGKDFPVFLHPKTKEEHALARTERKSGAGYTGFECFFDQSVTLEDDLIRRDLTINAMAMDNEGKLYDPYGGQKDLQAKVLRHVSAAFIEDPLRVLRVARFAAKLAHLDFRVAEETMQLMRDMVQNGELSTLTPERVWQEWHKSLSTSRPDVFLSVLKECGALAIVLPEIDALFGVPQPEKWHPEIDTGIHSLMVAEQAAKLSDSLPVRFAAQVHDLGKGVTPESEWPSHKMHCHTGLKLIKRLCDRVRVPNEFRDLALMVCEQHSNIHRAEELKPQTVIKILNKFDVWRKPERLQDILICCQADHAGRKGLEDQPYPQADLFMRAYQAAASVDVQAIIKDGFKGPAIRDEQEKRRIEAVCIARNKPDANTNK
SIO_010081: VA249_RS01865
subclass of: SO_0000673
so part of: VA249_RS01865
location: complement(385931..387172)
location: region:385931-387172:-1
so has part: feature:385931-387172:-1:exon

WP_221068618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385931-387172:-1:exon

VA249_RS01870
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01870
old locus tag: VYA_03590
so part of: sequence
location: 387309..388973
location: region:387309-388973:1
so has part: feature:387309-388973:1:exon
subclass of: SO_0000010

position:387309:1
position: 387309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388973:1
position: 388973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387309-388973:1:exon

VA249_RS01870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01870
old locus tag: VYA_03590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009843353.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ExeA family protein
translation: MYKDFFGFVELPFSIVPNSRYLYLSQRHKEAITHLQAGLGDGGGFAMLTGEVGTGKTTVAKAMLANLNENTKAGLILNPTFSSRDLLEAICDEFRVAYPQDATLKQLNQAIHGYLLDNHKLGWQTLLVIDEAQHLAADVLEQLRLLTNLETDTRKLLKVLLVGQPELQRLLQTTQLRQLAQRITGRYHLLPLDEKETADYIAFRLHTAGGDQQLFDRSSTKLIAKYSHGIPRLINLICDKSLNLSYYKGNLTVDKQTVTQACEEVMQFQAEIYQQDKPNQTFEWPVWGSAAIGVLAALGIGWGVTQQLTFKPTLSAQSLNSAQTELQASLPSVNEHSMSEPLFYDQLANEQLTNEQRDLLLEQNQSSLAINELYQLWGYRASVRDNLCLSEPQSTMRCQRKMATWPQLVQQNRPVVLELNYQGRVGYVILFAIGDGKVEVLNGSERLRLPISWLKPLWQGNILELWQAPLKETLRLDMEGPAVAVLDQLLAQAVNEPAIGTEKFDAALRERVELFQRWQGIRVDGIAGQRTLELLQQGVQPDAPELKEITEEQA
SIO_010081: VA249_RS01870
subclass of: SO_0000673
so part of: VA249_RS01870
location: 387309..388973
location: region:387309-388973:1
so has part: feature:387309-388973:1:exon

WP_221068619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:387309-388973:1:exon

VA249_RS01875
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01875
old locus tag: VYA_03600
so part of: sequence
location: 388973..389719
location: region:388973-389719:1
so has part: feature:388973-389719:1:exon
subclass of: SO_0000010

position:389719:1
position: 389719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388973-389719:1:exon

VA249_RS01875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01875
old locus tag: VYA_03600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005450409.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: general secretion pathway protein GspB
translation: MSVIKHVGLFLLPVTITAVGAAWYLELFALETPTAVVENNATQKIELNKANNVNNALSAIKPIFEVLSYPEATQLVQLSREWPTVDSPLDMDSFAGETYTSNESVQDEIEQFASDGQVKKASPTMQSQDDLGLSLDELDLSSLSPDLALKVENALTNSAQTPERQLTKMDDLERDAQEWHGRLPALNLQTHMYSSDVKRRWVKINNTEYYQGDVVDGQITLKEIQPQAVIVEFQGQQIRIPALYEWKG
SIO_010081: VA249_RS01875
subclass of: SO_0000673
so part of: VA249_RS01875
location: 388973..389719
location: region:388973-389719:1
so has part: feature:388973-389719:1:exon

WP_221068620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:388973-389719:1:exon

VA249_RS01880
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01880
old locus tag: VYA_03610
so part of: sequence
location: complement(389818..390429)
location: region:389818-390429:-1
so has part: feature:389818-390429:-1:exon
subclass of: SO_0000010

position:389818:-1
position: 389818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390429:-1
position: 390429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389818-390429:-1:exon

VA249_RS01880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01880
old locus tag: VYA_03610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005528771.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR04211 family SH3 domain-containing protein
translation: MKKLFITVLFTLLAAPAALAADRYISDDLFTFMHSGPNNTYRIIGSVNAGSKVQLLQTNKDTGYTQVRDARGRTGWVQNKFVTKQESMAIRLPRIEKELTEVKAQLANARQNSDTEKAGLVTSLETRNQQISDLEKKYSEISEQLTSVETENRELRAKLDTQKDDMLLKYFTYGGGVAGLGLLFGLLLPHVVPRRKKSPAGWA
SIO_010081: VA249_RS01880
subclass of: SO_0000673
so part of: VA249_RS01880
location: complement(389818..390429)
location: region:389818-390429:-1
so has part: feature:389818-390429:-1:exon

WP_128811706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:389818-390429:-1:exon

VA249_RS01885
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01885
old locus tag: VYA_03620
so part of: sequence
location: complement(390625..391884)
location: region:390625-391884:-1
so has part: feature:390625-391884:-1:exon
subclass of: SO_0000010

position:390625:-1
position: 390625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391884:-1
position: 391884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390625-391884:-1:exon

VA249_RS01885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01885
old locus tag: VYA_03620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004415583.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inorganic phosphate transporter
translation: MDILANYGTVLIIVAAIFGFMMAIGIGANDVANAMGTSVGSKALTVKQAIIIAMIFEFAGAYLAGGEVTDTIRKGVIETSLFASQPDVLVYGMMSALLAAGTWLLLASYMGWPVSTTHSIIGAIIGFACVSVGTEAVDWSSVQGIVGSWIITPVISGFFAYVIFVSAQRLIFDTENPLFNAKRFVPVYMFITTMVIALVTIKKGLKHVGLHLTNGEAWVWASVVSAAVMIGGYFYIQKKFANREEDRGFAGVEGIFSVLMVITACAMAFAHGSNDVANAIGPLSAVVSTVEHMGEVTAKSTIAWWILPLGGFGIVVGLATLGHKVMATVGTGITELTPSRGFAAQLATACTVVLASGTGLPISTTQTLVGAVLGVGFARGIAALNLGVVRNIVASWIVTLPAGALLAVVFFYGIQAAFS
SIO_010081: VA249_RS01885
subclass of: SO_0000673
so part of: VA249_RS01885
location: complement(390625..391884)
location: region:390625-391884:-1
so has part: feature:390625-391884:-1:exon

WP_128811705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390625-391884:-1:exon

VA249_RS01890
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01890
old locus tag: VYA_03630
so part of: sequence
location: complement(392015..392695)
location: region:392015-392695:-1
so has part: feature:392015-392695:-1:exon
subclass of: SO_0000010

position:392015:-1
position: 392015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392695:-1
position: 392695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392015-392695:-1:exon

VA249_RS01890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01890
old locus tag: VYA_03630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008222549.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR00153 family protein
translation: MPVNTIMGLFAKSPIKPLQRHVVCVNECCSHLVKFFEVSSKGDWEKASEIRAQISHLEKEADVLKREIRLKLPRGLFMPVDRTDMLELLTQQDKLANLAKDIAGRVYGRQLVIPEALQPNFLAYVQRCLDAANQAQKVINELDELLETGFKGREVTLVAEMIHQLDAIEDDTDAMQIELRQQLMAIESDMNPIDVMFLYKILEWVGGIADQAQRVGARLEVMLSRS
SIO_010081: VA249_RS01890
subclass of: SO_0000673
so part of: VA249_RS01890
location: complement(392015..392695)
location: region:392015-392695:-1
so has part: feature:392015-392695:-1:exon

WP_164837221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392015-392695:-1:exon

VA249_RS01895
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01895
old locus tag: VYA_03640
so part of: sequence
location: 392902..394434
location: region:392902-394434:1
so has part: feature:392902-394434:1:exon
subclass of: SO_0000010

position:392902:1
position: 392902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394434:1
position: 394434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392902-394434:1:exon

VA249_RS01895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01895
old locus tag: VYA_03640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017084750.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inorganic triphosphatase
translation: METEIELKFFVSPEFSETLKNKISETKVLQHSCRDLGNTYFDTADNWLRKHDIGLRIRRFDDVFVQTVKTAGRVVAGLHQRPEYNAEHINNDPELTLHPSDIWPAGKDIATLQSELTPLFSTNFTREQWLIGMADGSQIEVAFDQGAVIAQGEDGEERQTPICEVELELKSGQTDALFTLARSLCESGGMRLGNMSKAAKGYRLATGYAGDEVKPLALVDSTKHDTVEYCLINSLEHALAHWHYHEQIYTERDCVEALREIVNAIRFIRQTFTIFGSIVPRRASAILRQEMKWLEEELEWLDEHAHLEELLDDKGNVLRKLDARKFLVSELTQQLEELPSREQVLELLSSARYTGLLLDLSRWILTRGWQPFLDDKAREKITSNIQPFSVMQLDRTWAELMEAFPAERQLSAQEYIDQRYRLLRNLYTGIGFASLYDAEERNSFRLPWADLVHGIDDLLMLNHLLPMVGMLEDEEQEQLERWLTRQERSILHAMDQTRAIGVEVEPYWQE
SIO_010081: VA249_RS01895
subclass of: SO_0000673
so part of: VA249_RS01895
location: 392902..394434
location: region:392902-394434:1
so has part: feature:392902-394434:1:exon

WP_128811703.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392902-394434:1:exon

VA249_RS01900
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01900
old locus tag: VYA_03650
so part of: sequence
location: complement(394469..395242)
location: region:394469-395242:-1
so has part: feature:394469-395242:-1:exon
subclass of: SO_0000010

position:394469:-1
position: 394469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395242:-1
position: 395242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394469-395242:-1:exon

VA249_RS01900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01900
old locus tag: VYA_03650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009843360.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: potassium channel family protein
translation: MESNHIKDSTKPMGLLSLILSFMALFVISGLLFFPLKHETRQVLIGLDFIICSIFILQLTIDLIRATDRTAYIKQHWIDFVASIPMIEPLRYARLFHILRVILVLRSSRFLLFQLRQNRRETTLASILLLMVVLITLGSSAMLFIEGNNPESNIQTGSDALWWAFVTISTVGYGDHYPVTAAGKVLAVLIIICGVGIFGMISGLITSLLTAPTRQQDHRSKNKEKLLEQVLARQGQILERLQNIENELNHQKKDTKK
SIO_010081: VA249_RS01900
subclass of: SO_0000673
so part of: VA249_RS01900
location: complement(394469..395242)
location: region:394469-395242:-1
so has part: feature:394469-395242:-1:exon

WP_221068621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394469-395242:-1:exon

VA249_RS01905
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01905
old locus tag: VYA_03660
so part of: sequence
location: 395317..396573
location: region:395317-396573:1
so has part: feature:395317-396573:1:exon
subclass of: SO_0000010

position:395317:1
position: 395317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396573:1
position: 396573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395317-396573:1:exon

VA249_RS01905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01905
old locus tag: VYA_03660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019826853.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MEKLTFKPWERVISDIKLIPKMVMLMVFSTVLIVAKQLWDANTFHDSLLAATHNEQIAQQHYEAYLTQVAWQTAILIIVFVVLLLAAARVMLRQTQYLSEAIKLMASKNLSVPFDMDCKDEYGDVARELEITRRQLHDVIQLQITASDELATLTEVMTMSMSETKDSAQDEFNEIDQLATAMSEMSSTVQTVAEHAQTASSLTEKASKQAVTGQLFLQKTMSKMSELSTDISSSANAVNQVEERVEAIGSVVGTIQGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQQATIEIQEMITQLQNSAESAVELMEKSVVEAAEGVELVSNAGTELDGIVGQVTQINDMNFQIATASGQQSSVAEEMSQNLTNVRELVEGSVVVMTELLETAEMMQNNAGELDKKINSFQV
SIO_010081: VA249_RS01905
subclass of: SO_0000673
so part of: VA249_RS01905
location: 395317..396573
location: region:395317-396573:1
so has part: feature:395317-396573:1:exon

WP_221068622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395317-396573:1:exon

VA249_RS01910
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: glnE
locus tag: VA249_RS01910
old locus tag: VYA_03670
so part of: sequence
location: 396676..399519
location: region:396676-399519:1
so has part: feature:396676-399519:1:exon
subclass of: SO_0000010

position:396676:1
position: 396676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399519:1
position: 399519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396676-399519:1:exon

VA249_RS01910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: glnE
locus tag: VA249_RS01910
old locus tag: VYA_03670
EC number: 2.7.7.42
EC number: 2.7.7.89
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005455447.1
GO function: GO:0008882 - [glutamate-ammonia-ligase] adenylyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
translation: MQLPSSLISVADSAVQHAENAGYFQHWPTEVAEQFHFVSGLSKFITEAIHRDEKLAQDLPTMLIENSRSSTYRERLAALLAECQDEMSGHRVLRQFRNREMVYIAWKDFTHAWTLEASLRHLSQLAEAMIFETYQWQYKICCNEWGTPTNAAGEAQPMLIIGMGKLGGGELNFSSDIDLIFTYPENGETQGARRSIANAQFFTRLGQRIIKALDQQTFDGFCYRVDMRLRPFGESGPLVMSYAALEDYYQEQGRDWERYAMIKARVMGCEMYPQYQELRQMLRPFVFRRYIDFSAIQSLRRMKSMISSEVRRRGLSNNIKLGAGGIREIEFIAQVFQLIRGGREPSLRGRGLLETLNAIGELGLLAKHEVTNLEQAYKYLRQLENLLQAMADKQTQTLPDCDEDRLKLATAMRFESWEALVIQTQQHMSNVHNVFETLIGDDDDDEAEAVPRHFHELWDMAAKSDVLEHVLQNDIDADNPAQLAKTIMQFKTDLAKKTLGPRGRDVLTKLMPKVFNAVFAHPDAQFGLPRVLHLLHNICTRTTYLELLDEHPAALVQLVRLCTASPMISEQLSRYPILLDELIDPQHLYNPIPLESYRTELRDFLARIPEDDMEQQMEALRQFKQICILRIAAADIAGVLPVMKVSDHLTYLAEAVVEAVINQAWLQVSEKYGEPTHVKDREGKGFAVIGYGKVGGWELGYNSDLDIVFMHDCPVSVYTDGKKEIDGRQFYLRLAQRIIHIFSTRTASGILYEVDTRLRPSGASGLLVSPTDAFDDYQHQDAWTWEHQALVRARMIYGDEPLAIAFHNTRHDVLCKARDQGALKKEVVDMREKMRGHLGGKKSGRFMLKQDQGGITDIEFLAQYLVLNYSHSKPKLIRWCDNVRIFETLIAQGVMEEDQAMQLTRAYTSMRDEIHRRNLLNLDADVAEDKFVAEREWVKHAWNQWFS
SIO_010081: VA249_RS01910
subclass of: SO_0000673
so part of: VA249_RS01910
location: 396676..399519
location: region:396676-399519:1
so has part: feature:396676-399519:1:exon

WP_221068623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:396676-399519:1:exon

VA249_RS01915
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: hldE
locus tag: VA249_RS01915
old locus tag: VYA_03680
so part of: sequence
location: 399586..401016
location: region:399586-401016:1
so has part: feature:399586-401016:1:exon
subclass of: SO_0000010

position:399586:1
position: 399586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401016:1
position: 401016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399586-401016:1:exon

VA249_RS01915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: hldE
locus tag: VA249_RS01915
old locus tag: VYA_03680
EC number: 2.7.1.167
EC number: 2.7.7.70
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016789747.1
GO function: GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]; GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE
translation: MKPILPDYSSAGVLIIGDVMLDRYWYGPTGRISPEAPVPVVKVENNEERPGGAANVAMNIASLGGHAHIVGLTGMDEPAKVLTETLTSLKVKCDFVALPEYPTITKLRVMSRGQQLIRLDFEDKFENTDPEPVIARMETALSSVKAVILSDYAKGTLEHVQAYIQKARAANVPVFIDPKGADFERYRGATLLTPNMKEFEDVVGKVKSEQELVEKALALVEEFDFEALLVTRSENGMTLIRRGQEPFHLPTQAKEVYDVTGAGDTVISVLASSVAAGKSFEEACALANAAAGVVVGKLGTSTLSEIELAEAVHGSQDTDYGVITEQALIEAVKKARAKGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNTDESVKRLKGPGRPVNPTDRRMAVLAGLGAVDWVVPFSEDTPQRLISEVLPSMLVKGGDYKPEDIAGGKEVIAAGGEVRVLNFEDGCSTSEIINAIKGGKG
SIO_010081: VA249_RS01915
subclass of: SO_0000673
so part of: VA249_RS01915
location: 399586..401016
location: region:399586-401016:1
so has part: feature:399586-401016:1:exon

WP_221068624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399586-401016:1:exon

VA249_RS01920
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: tolC
locus tag: VA249_RS01920
old locus tag: VYA_03690
so part of: sequence
location: complement(401196..402518)
location: region:401196-402518:-1
so has part: feature:401196-402518:-1:exon
subclass of: SO_0000010

position:401196:-1
position: 401196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402518:-1
position: 402518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401196-402518:-1:exon

VA249_RS01920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: tolC
locus tag: VA249_RS01920
old locus tag: VYA_03690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014230771.1
GO function: GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane channel protein TolC
translation: MKKLLPLFISAALGSMSTSAWADSLAEIYDLAKQNDPQLLSVAAQRDKAFEAITSSRSALLPQINLTAGYNLTRGDTDPDAGGSISNDKNVLSAGVGFSQELYNRASWITLDTAEKSARQADASYAATQQGLILRVAQAYFEVLRAQDNLVFVRAEKAAVGRQLEQTKQRFEVGLSAITDVHDAQAQYDGVLADEILAQNSLINSYESLREITGQEHKNLNVLDTARFSASRSSSSADVLVDEAKTTNLSLLSARISQDIARDNISLASSGHLPTLSLDGGYNYSDQAESINDNTTDGFNIGVNLAVPLYTGGNITSQTKQAEFAYVAASEDLEKEYRSVVKDVRAQNNNINASIGALKAYEQSVVSARSALEATEAGFDVGTRTIVDVLDSTRRLYDANKNLSNARYDYILSVLQLRQAVGTLSEQDILDVNAGLKPAS
SIO_010081: VA249_RS01920
subclass of: SO_0000673
so part of: VA249_RS01920
location: complement(401196..402518)
location: region:401196-402518:-1
so has part: feature:401196-402518:-1:exon

WP_221068625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401196-402518:-1:exon

VA249_RS01925
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: nudF
locus tag: VA249_RS01925
old locus tag: VYA_03700
so part of: sequence
location: 402749..403399
location: region:402749-403399:1
so has part: feature:402749-403399:1:exon
subclass of: SO_0000010

position:402749:1
position: 402749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403399:1
position: 403399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402749-403399:1:exon

VA249_RS01925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: nudF
locus tag: VA249_RS01925
old locus tag: VYA_03700
EC number: 3.6.1.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005379881.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ADP-ribose diphosphatase
translation: MQQCDKQQNQFTSQDVEIISKETVFKGFFKMVKYRFKHRLFAGGWSGIVEREMFERGHAAAMLPYDPITDQVVIIEQIRVGALEHQHPWQLEIVAGMIDRDETAEEVIRREAVEEAGIEVQRMASVTSYYPSSGGCSEKLDVFVGEVDASKAYGIHGLDYEDEDIRVHVISRETAYQWVKDGKFENGASIIALQWLQLNHQALTSQWGHPEQAESK
SIO_010081: VA249_RS01925
subclass of: SO_0000673
so part of: VA249_RS01925
location: 402749..403399
location: region:402749-403399:1
so has part: feature:402749-403399:1:exon

WP_221068626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402749-403399:1:exon

VA249_RS01930
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01930
old locus tag: VYA_03710
so part of: sequence
location: 403399..403842
location: region:403399-403842:1
so has part: feature:403399-403842:1:exon
subclass of: SO_0000010

position:403842:1
position: 403842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403399-403842:1:exon

VA249_RS01930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01930
old locus tag: VYA_03710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005395930.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1249 family protein
translation: MVQAAVKQRYHVDLAGLMRTYETNYAKLNALLPVSAEVGDVRCYQAANMIYQLTVNEITKYTTVVEICQSDDTPVFPLPTMSVRLYHDARVAEVCSSGAFSRIKAKYDYPNDQLMQKDEKHQLNTFLGEWLTFCLRSGISRTPLAFN
SIO_010081: VA249_RS01930
subclass of: SO_0000673
so part of: VA249_RS01930
location: 403399..403842
location: region:403399-403842:1
so has part: feature:403399-403842:1:exon

WP_128811697.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403399-403842:1:exon

VA249_RS01935
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: cpdA
locus tag: VA249_RS01935
old locus tag: VYA_03720
so part of: sequence
location: 403906..404712
location: region:403906-404712:1
so has part: feature:403906-404712:1:exon
subclass of: SO_0000010

position:403906:1
position: 403906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404712:1
position: 404712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403906-404712:1:exon

VA249_RS01935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: cpdA
locus tag: VA249_RS01935
old locus tag: VYA_03720
EC number: 3.1.4.53
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005528755.1
GO function: GO:0004115 - 3',5'-cyclic-AMP phosphodiesterase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3',5'-cyclic-AMP phosphodiesterase
translation: MQSSSDSIKLLQITDTHLFAADEGSLLSVRTADSFYAVVQEILKRQVQFEYIFATGDISQDHSAESYQRFADGIAPLGKDCFWLPGNHDYKPNMSSVLPSSQIQTVEHLYLGDHWQVILLDSQVVGVPHGRLSDQQLSLLEEKLAENANRHTLVLLHHHPLLVGSAWLDQHTLKDADAFWQVVDRFDNVKGIVCGHVHQDMNVVHHGIRVMATPSTCVQFKPNSDDFGLDTLSPGWREIELHQSGDITTQVNRLSEGQFQPDFTSNGY
SIO_010081: VA249_RS01935
subclass of: SO_0000673
so part of: VA249_RS01935
location: 403906..404712
location: region:403906-404712:1
so has part: feature:403906-404712:1:exon

WP_221068627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403906-404712:1:exon

VA249_RS01940
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: yqiA
locus tag: VA249_RS01940
old locus tag: VYA_03730
so part of: sequence
location: 404767..405351
location: region:404767-405351:1
so has part: feature:404767-405351:1:exon
subclass of: SO_0000010

position:404767:1
position: 404767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405351:1
position: 405351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404767-405351:1:exon

VA249_RS01940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: yqiA
locus tag: VA249_RS01940
old locus tag: VYA_03730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005431720.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: esterase YqiA
translation: MSKPSLLLYIHGFNSSPLSMKANVMKAYCEQHRPDIKVIVPQLPCFPQLAAQCLLDIIEQYKNDFNIGLVGSSLGGYMSTWLNAQFGFRAVVVNPAVKPYELLVDYLGEQTNPYTHETYTLEACHIDELKALDVQSIASPQSFWLLQQTEDEVLDYRQAVDKFAQAKQTVENGGDHSFIGFERYPAQIIEFLKL
SIO_010081: VA249_RS01940
subclass of: SO_0000673
so part of: VA249_RS01940
location: 404767..405351
location: region:404767-405351:1
so has part: feature:404767-405351:1:exon

WP_128811695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404767-405351:1:exon

VA249_RS01945
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: parE
locus tag: VA249_RS01945
old locus tag: VYA_03740
so part of: sequence
location: 405601..407481
location: region:405601-407481:1
so has part: feature:405601-407481:1:exon
subclass of: SO_0000010

position:405601:1
position: 405601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407481:1
position: 407481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405601-407481:1:exon

VA249_RS01945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: parE
locus tag: VA249_RS01945
old locus tag: VYA_03740
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010445819.1
GO component: GO:0009340 - DNA topoisomerase IV complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase IV subunit B
translation: MTEQYNAGAIEVLNGLEPVRRRPGMYTDTARPNHLGQEVIDNSVDEALAGHASKVQVILHADQSLEVIDDGRGMPVDIHPEEKVSGVELILCKLHAGGKFSNKNYQFSGGLHGVGISVVNALSKRVEVTVRRDGQVYDIAFEHGEKVEDLTVTGTCGRRNRGTSVHFWPDAKYFDSANFSVTRLVNNLRAKAVLCPGLEITFTDKVNGKDYQWLYEDGLKDYLAEGVKGYPVMPEEPFTGEFSAETEAANWAVIWQPEGGEMITESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRNLLPRGVKLTGDDVFDRCSYVLSVKIQDPQFAGQTKERLSSRQTAAFVSGVVKDAFSLWLNEKPQLAEQLAEVCIANAHRRMRASKKVVRKKVASGPALPGKLTDCSVQDLNRTEIFFVEGDSAGGSAKQARDREFQAVMPLRGKILNTWEVSADQVLASQEVHDISVALGIDPDNDNLDGLRYGKVCILADADSDGLHIATLLCALFTRHFRALVEAGHIYVAMPPLYRIDCGKEVFYALDDDEKEGILERLSKKKAKINVQRFKGLGEMNPLQLRETTMDPNTRRLVQLTIDDSEATMEMMDMLLGKKRADDRRSWLQSNGDMAEV
SIO_010081: VA249_RS01945
subclass of: SO_0000673
so part of: VA249_RS01945
location: 405601..407481
location: region:405601-407481:1
so has part: feature:405601-407481:1:exon

WP_128811694.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405601-407481:1:exon

VA249_RS01950
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: parC
locus tag: VA249_RS01950
old locus tag: VYA_03750
so part of: sequence
location: 407485..409773
location: region:407485-409773:1
so has part: feature:407485-409773:1:exon
subclass of: SO_0000010

position:407485:1
position: 407485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409773:1
position: 409773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407485-409773:1:exon

VA249_RS01950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: parC
locus tag: VA249_RS01950
old locus tag: VYA_03750
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005528747.1
GO component: GO:0009340 - DNA topoisomerase IV complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase IV subunit A
translation: MSTEITYDGVEQLPMRKFTEDAYLNYSMYVIMDRALPYIGDGLKPVQRRIIYAMSELGLSASAKYKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTEAKLSKFAEVLLGELGQGTVEWQPNFDGTMKEPQMLPARLPHILLNGVTGIAVGMATDIPPHNVREVAEATIHLIDNPKADLSDVMQFVKGPDYPTEAEITSPKAEIEKIYRNGRGSIKMRAVWHKEGSDIVITSLPHQVSGAKLLEQIANQMRAKKLPMVDDLRDESDHENPTRIVVVPKSNRVDCDLLMNHLFASTDLERSYRVNLNMIGLDNRPQVKGLVQILSEWIEFRRTTVRRRLQYRLDKVMARLHILEGLLIAYLNLDEVIEIIRTEDDPKAVLMARFGITDIQADAILDTKLRHLAKLEEMKIRGEQDELEKEREKLEQLLGSERRLNTLLKKEIKADAEKYGDDRRSPMVERAEAKALTERDLVPSEPITVVLSEKGWIRHAKGHDVDAEGLNYKSGDNYLAHARGKSNQQAVFFGSDGRSYSLESHSLPSARSQGEPITGRLNITAGSSIRQVIMGEEDQLWLVGSDAGYGFVCKGSELLSKNRSGKALVTLPANSEVMTPKTIADLDSDEILAITNQGRMLLFPIKDLPQLAKGKGNKIINIPAAKAKEREEVLSHLMSLPQGASLTLYAGKRKLGLKPSDLDNFRGERGRRGSLLPRGLQRVTRIDVEMGVSTDASEQPSDSE
SIO_010081: VA249_RS01950
subclass of: SO_0000673
so part of: VA249_RS01950
location: 407485..409773
location: region:407485-409773:1
so has part: feature:407485-409773:1:exon

WP_221068628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:407485-409773:1:exon

VA249_RS01955
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: degS
locus tag: VA249_RS01955
old locus tag: VYA_03760
so part of: sequence
location: complement(409823..410890)
location: region:409823-410890:-1
so has part: feature:409823-410890:-1:exon
subclass of: SO_0000010

position:409823:-1
position: 409823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410890:-1
position: 410890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409823-410890:-1:exon

VA249_RS01955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: degS
locus tag: VA249_RS01955
old locus tag: VYA_03760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005528745.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0045152 - antisigma factor binding [Evidence IEA]; GO:0008236 - serine-type peptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane-stress sensor serine endopeptidase DegS
translation: MLSFLLRSVFLGLATAIIVLLAVPSLRSNVIPAALVDPQPSDIASLEVSFNQAVRKAAPAVVNIYSRKYVEHDRSKLSTQGLGSGVIVSEKGYIITNYHVVAQADQIVVALQDGRAAAAQLVGTDKRTDIAILRVDGTNLPVIPLNTTYTPQVGDVVLAIGNPYNLGQTTTFGIISATGRSSISDGRQAFIQTDAAINEGNSGGALVNTQGELVGINTASFQQATDLETYGISFAIPYPLANKIMQKIIADGRVIRGYIGIDGQDINAVTARLLGNQHIGGIVVLGIDPNGPASLAGFQKQDIIISINGTKVQGRQSVMDIVTDLRPGTTVDVGIIRQGKEMTLKVTIAEDKQEA
SIO_010081: VA249_RS01955
subclass of: SO_0000673
so part of: VA249_RS01955
location: complement(409823..410890)
location: region:409823-410890:-1
so has part: feature:409823-410890:-1:exon

WP_128811692.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409823-410890:-1:exon

VA249_RS01960
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01960
old locus tag: VYA_03770
so part of: sequence
location: complement(411009..412376)
location: region:411009-412376:-1
so has part: feature:411009-412376:-1:exon
subclass of: SO_0000010

position:411009:-1
position: 411009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412376:-1
position: 412376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411009-412376:-1:exon

VA249_RS01960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01960
old locus tag: VYA_03770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000749332.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DegQ family serine endoprotease
translation: MKKPLLALTVLSLSLSSIITPITVSAALPLSVDGQQLPSLAPMLEKVTPAVVSIAVEGKQVQTSRIPEQFQFFFGPEFPTEQTRERPFRGLGSGVIIDAQKGQIVTNYHVIKGADEIRVRLYDGREYDAELVGGDEMSDIALLKLEKAKDLTQIKVADSDKLRVGDFTVAIGNPFGLGQTVTSGIVSALGRSGLNVENFENFIQTDAAINSGNSGGALVNLNGELIGINTAILGPNGGNVGIGFAIPSNMMKNLTDQILEFGEVKRGMLGVQGGEVTSELAEALGYESSKGAFVSQVVPGGAADKAGLKAGDVIISVNGKTIETFSELRAKVATLGAGKEISLGVIRDGKNKSFKVTLGEASTVKAKAETLHEGLKGAELSNTAPGDAIQGVKVTSVTENSPAAQYQLEQGDIIIGVNRKRVKNLAELRSIAENHKGVLALNIQRGDQTIYLIVR
SIO_010081: VA249_RS01960
subclass of: SO_0000673
so part of: VA249_RS01960
location: complement(411009..412376)
location: region:411009-412376:-1
so has part: feature:411009-412376:-1:exon

WP_221068629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:411009-412376:-1:exon

VA249_RS01965
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: zapG
locus tag: VA249_RS01965
old locus tag: VYA_03780
so part of: sequence
location: complement(412573..413016)
location: region:412573-413016:-1
so has part: feature:412573-413016:-1:exon
subclass of: SO_0000010

position:412573:-1
position: 412573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413016:-1
position: 413016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412573-413016:-1:exon

VA249_RS01965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: zapG
locus tag: VA249_RS01965
old locus tag: VYA_03780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010434684.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Z-ring associated protein ZapG
translation: MPWIYAVAGLLVGTIVGVVVSRLTTPGYKKQKSVQKELESAKFELEQQRQDLVDHFAQTAEMLDTLGKDYTKLYQHMAKTSSELLPNLPEQDNPFDKKTAMSSEQIEEDQADANEQPKDYANGATGLLKDQEKEIINAPDVVTAKAS
SIO_010081: VA249_RS01965
subclass of: SO_0000673
so part of: VA249_RS01965
location: complement(412573..413016)
location: region:412573-413016:-1
so has part: feature:412573-413016:-1:exon

WP_128811690.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412573-413016:-1:exon

VA249_RS01970
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: zapE
locus tag: VA249_RS01970
old locus tag: VYA_03790
so part of: sequence
location: 413215..414318
location: region:413215-414318:1
so has part: feature:413215-414318:1:exon
subclass of: SO_0000010

position:413215:1
position: 413215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414318:1
position: 414318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413215-414318:1:exon

VA249_RS01970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: zapE
locus tag: VA249_RS01970
old locus tag: VYA_03790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012603203.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0051301 - cell division [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein ZapE
translation: MTPLKRYQRDIAEHGFQPDEAQHAAVTALDKLYYAIAEFQTAPIPQLSTWQKLLGKKAELPEPPKGLYFWGGVGRGKTYLMDAFYDALPTEKKMRVHFHRFMYRVHDELKRLGEVENPLSKVADQFKKEADIVCFDEFFVSDITDAMILATLLQEMFKRQMILVATSNIEPENLYRNGLQRARFLPAIALIQQRCDILNVDSGVDYRLRTLEQAEIYHYPLDEQAAINLNRYYQQLIGERKVASNVIEINHRDIAVMEASDGVLHATFEQLCQTPRSQNDYIEISRIYHTVLLGGVKQMDGKMDDAARRFIALVDEFYERNVKLIISAEVAMPLLYSDGLLEFEFKRCLSRLTEMQSHDYLTKEHLA
SIO_010081: VA249_RS01970
subclass of: SO_0000673
so part of: VA249_RS01970
location: 413215..414318
location: region:413215-414318:1
so has part: feature:413215-414318:1:exon

WP_211915425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:413215-414318:1:exon

VA249_RS01975
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rplM
locus tag: VA249_RS01975
old locus tag: VYA_03800
so part of: sequence
location: 414571..414999
location: region:414571-414999:1
so has part: feature:414571-414999:1:exon
subclass of: SO_0000010

position:414571:1
position: 414571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414999:1
position: 414999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414571-414999:1:exon

VA249_RS01975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rplM
locus tag: VA249_RS01975
old locus tag: VYA_03800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L13
translation: MKTFVAKPETVKRDWYVVDAEGKTLGRLASEIASRLRGKHKAEYTPHVDTGDYIIVINAEKVAVTGNKAKNKVYYRHSEFPGGLKSITFEKLIDRKPEMALELAVKGMLPRGPLGRAMYRKLKVYAGAEHNHVAQQPQVLDI
SIO_010081: VA249_RS01975
subclass of: SO_0000673
so part of: VA249_RS01975
location: 414571..414999
location: region:414571-414999:1
so has part: feature:414571-414999:1:exon

WP_005372872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414571-414999:1:exon

VA249_RS01980
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rpsI
locus tag: VA249_RS01980
old locus tag: VYA_03810
so part of: sequence
location: 415015..415407
location: region:415015-415407:1
so has part: feature:415015-415407:1:exon
subclass of: SO_0000010

position:415015:1
position: 415015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415407:1
position: 415407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415015-415407:1:exon

VA249_RS01980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rpsI
locus tag: VA249_RS01980
old locus tag: VYA_03810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S9
translation: MAENQYYGTGRRKSSAARVFIKPGSGNIVINKRSLDEYFGRPTSRMVVKQPLELVELTEKLDLYVTVKGGGISGQAGAIRHGITRALMEYDESLRPTLRAAGYVTRDARCVERKKVGLRKARRRPQFSKR
SIO_010081: VA249_RS01980
subclass of: SO_0000673
so part of: VA249_RS01980
location: 415015..415407
location: region:415015-415407:1
so has part: feature:415015-415407:1:exon

WP_005436094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415015-415407:1:exon

VA249_RS01985
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: petA
locus tag: VA249_RS01985
old locus tag: VYA_03820
so part of: sequence
location: 415954..416544
location: region:415954-416544:1
so has part: feature:415954-416544:1:exon
subclass of: SO_0000010

position:415954:1
position: 415954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416544:1
position: 416544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415954-416544:1:exon

VA249_RS01985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: petA
locus tag: VA249_RS01985
old locus tag: VYA_03820
EC number: 7.1.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000063597.1
GO component: GO:0045275 - respiratory chain complex III [Evidence IEA]
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0008121 - ubiquinol-cytochrome-c reductase activity [Evidence IEA]
GO process: GO:0009060 - aerobic respiration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ubiquinol-cytochrome c reductase iron-sulfur subunit
translation: MSNAPLNNGRRRFLTATTAVVGGLGAAAVAVPFIKSWNPSAKAKAAGAPVEVDISKIEAGQMVRVEWQGKPVWVVRRTQEVVDNLKNIDGQLRDPKSEMEQQPVYAQNEYRSIKPEFFVAVGFCTHLGCSPTYLPDTFAEQVQGVKSGFFCPCHGSKFDMAGRVFQGVPAPLNLVVPKHMYLSDTKLMIGVDEGDA
SIO_010081: VA249_RS01985
subclass of: SO_0000673
so part of: VA249_RS01985
location: 415954..416544
location: region:415954-416544:1
so has part: feature:415954-416544:1:exon

WP_211915424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415954-416544:1:exon

VA249_RS01990
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01990
old locus tag: VYA_03830
so part of: sequence
location: 416544..417809
location: region:416544-417809:1
so has part: feature:416544-417809:1:exon
subclass of: SO_0000010

position:417809:1
position: 417809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416544-417809:1:exon

VA249_RS01990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01990
old locus tag: VYA_03830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001148351.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome bc complex cytochrome b subunit
translation: MQALLDWVEKRLPAMNAYKKHLSEYPMPKNFNFWYLFGSLAMLVLVNQILTGIWLTMNYVPSGDGAFASIEYIMRDVEYGWLLRYMHSTGASAFFVVVYLHMFRGLIYGSYQKPRELLWIFGMLIFLVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTLWIRGDYIISGATLNRFFALHVIALPIVLLLLVVLHVLALHEVGSNNPDGIETKLPKGSMGDDYETQFKFHDYYTKKYDIIDSIPFHPYGTVKDLVGVAGFLFFFCYVLFFNPEMGGYFLEPPNFEAANPLKTPEHIAPVWYFTPFYAILRAVPDKLLGVILMGASIAVLFVLPWLDRCKVRSYRYRSKIHLLNIVQFTIAFIALGILGALPATPLYTILSQIFSLCYFMFFVLLFFYSKNEATKPLPERVTFK
SIO_010081: VA249_RS01990
subclass of: SO_0000673
so part of: VA249_RS01990
location: 416544..417809
location: region:416544-417809:1
so has part: feature:416544-417809:1:exon

WP_128811686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416544-417809:1:exon

VA249_RS01995
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS01995
old locus tag: VYA_03840
so part of: sequence
location: 417806..418543
location: region:417806-418543:1
so has part: feature:417806-418543:1:exon
subclass of: SO_0000010

position:417806:1
position: 417806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418543:1
position: 418543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417806-418543:1:exon

VA249_RS01995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS01995
old locus tag: VYA_03840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017190074.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c1
translation: MKKWIVILFAMLPSLAMAAGANVPLDKANVDLTDKASLQNGAKLFMNYCFACHSTQYQRYERVATDLEIPIDLMKENLIFDPEAKVGDLMVNAMPAKQAGDWFGAPPPDLTLVARVRGADWLYTYLRAFYVDPSRPFGVNNLVFPSVGMPHVLEELQGIPMPVYGTKVVDGEEVQVVIGTETNGTGELSAGEYDKAVGDLVNFLVYSGDPVQLERHALGWWVMGFLVLLTIVVVLLKKEYWRDVH
SIO_010081: VA249_RS01995
subclass of: SO_0000673
so part of: VA249_RS01995
location: 417806..418543
location: region:417806-418543:1
so has part: feature:417806-418543:1:exon

WP_211915422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:417806-418543:1:exon

VA249_RS02000
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: sspA
locus tag: VA249_RS02000
old locus tag: VYA_03850
so part of: sequence
location: 418640..419275
location: region:418640-419275:1
so has part: feature:418640-419275:1:exon
subclass of: SO_0000010

position:418640:1
position: 418640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419275:1
position: 419275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418640-419275:1:exon

VA249_RS02000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: sspA
locus tag: VA249_RS02000
old locus tag: VYA_03850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006877359.1
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006749 - glutathione metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stringent starvation protein SspA
translation: MAVAANKRSVMTLFSSASDLYSHQVRIVLAEKGVSVEVELVDEANLPAELVELNPYKSVPTLVDRELALYDSKIIMEYLDERFPHPPLMPVYPVARGNSRLMMYRIERNWYSLAEKVVKGNAEESEKARTKLRNDLLTLAPIFAEYEYFMSEEFSLIDCYLAPLLWRLPQLGIDLVGPGSKEIKVYMNRVFERDSFLASLTEAEREMRLVR
SIO_010081: VA249_RS02000
subclass of: SO_0000673
so part of: VA249_RS02000
location: 418640..419275
location: region:418640-419275:1
so has part: feature:418640-419275:1:exon

WP_005436105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:418640-419275:1:exon

VA249_RS02005
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: sspB
locus tag: VA249_RS02005
old locus tag: VYA_03860
so part of: sequence
location: 419295..419774
location: region:419295-419774:1
so has part: feature:419295-419774:1:exon
subclass of: SO_0000010

position:419295:1
position: 419295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419774:1
position: 419774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419295-419774:1:exon

VA249_RS02005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: sspB
locus tag: VA249_RS02005
old locus tag: VYA_03860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005447768.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ClpXP protease specificity-enhancing factor
translation: MDIAKMTARRPYMLRAFYEWLVDNDLTPHLVVDATLPGVRVPVEFIQDGQIILNIAPRAVGQLELGNDAITFHARFSGRPHSVIVPMYAVQAIYARENGAGTMFEPEEAYTHIEEEGIVEEEQSPSFTTVSGGSDTDESESEEEEAPRPKGRPSLRVIK
SIO_010081: VA249_RS02005
subclass of: SO_0000673
so part of: VA249_RS02005
location: 419295..419774
location: region:419295-419774:1
so has part: feature:419295-419774:1:exon

WP_211915421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419295-419774:1:exon

VA249_RS02010
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02010
old locus tag: VYA_03870
so part of: sequence
location: complement(419837..420439)
location: region:419837-420439:-1
so has part: feature:419837-420439:-1:exon
subclass of: SO_0000010

position:419837:-1
position: 419837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420439:-1
position: 420439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419837-420439:-1:exon

VA249_RS02010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02010
old locus tag: VYA_03870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017449189.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BON domain-containing protein
translation: MIRSLVILCAALSMSGCAGLFIAGAATTANIVTDTRTTKEIWQDNNIEFEIAAIGNKAPFKGKTRIVASSYNGTVVLMGQAPTDELINEFERRARDIEGVKNIHNQIKQKEPLSVTQISNDSWITTKVKSALLTDSELNGVKVKVITEDSDVFLFGYVTPKQSERATEIARNISGVKQVIKGFQYGEATEVNAAEKEALE
SIO_010081: VA249_RS02010
subclass of: SO_0000673
so part of: VA249_RS02010
location: complement(419837..420439)
location: region:419837-420439:-1
so has part: feature:419837-420439:-1:exon

WP_221068630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419837-420439:-1:exon

VA249_RS02015
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02015
old locus tag: VYA_03880
so part of: sequence
location: complement(420462..421052)
location: region:420462-421052:-1
so has part: feature:420462-421052:-1:exon
subclass of: SO_0000010

position:420462:-1
position: 420462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421052:-1
position: 421052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420462-421052:-1:exon

VA249_RS02015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02015
old locus tag: VYA_03880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000887295.1
GO function: GO:0097367 - carbohydrate derivative binding [Evidence IEA]; GO:0008968 - D-sedoheptulose 7-phosphate isomerase activity [Evidence IEA]
GO process: GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoheptose isomerase
translation: MLDSIKDSFTESIQIQIAAAEALPDAITHAAQAMVSSLLNGNKILCCGNGGSASNSQQFVSCLLNRFETERPSLPAMALTADNTTLTAVANDYHYQEIFSKQVRAFGQPGDILLAISTSGNSKNVLKAMEAAVTRDMTIIALTGKDGGEMAGLLGEHDVEIRIPSHRTARIHEVHMVTLHCLCDLIDQVLFPAHEE
SIO_010081: VA249_RS02015
subclass of: SO_0000673
so part of: VA249_RS02015
location: complement(420462..421052)
location: region:420462-421052:-1
so has part: feature:420462-421052:-1:exon

WP_128811682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:420462-421052:-1:exon

VA249_RS02020
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02020
old locus tag: VYA_03890
so part of: sequence
location: complement(421056..421421)
location: region:421056-421421:-1
so has part: feature:421056-421421:-1:exon
subclass of: SO_0000010

position:421056:-1
position: 421056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421421:-1
position: 421421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421056-421421:-1:exon

VA249_RS02020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02020
old locus tag: VYA_03890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006072695.1
GO function: GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YraN family protein
translation: MLFSKRHIGNQYEALAKQYLQRQGLRFLQQNYLTKVGEIDLIFQQGETIVFVEVKYRKNDHYGSAAEMVTYAKMRKLVKTAHIWLRQKQYNAQNLDYRFDVIAIHNEGRDINWIQNAISEG
SIO_010081: VA249_RS02020
subclass of: SO_0000673
so part of: VA249_RS02020
location: complement(421056..421421)
location: region:421056-421421:-1
so has part: feature:421056-421421:-1:exon

WP_221068631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:421056-421421:-1:exon

VA249_RS02025
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02025
old locus tag: VYA_03900
so part of: sequence
location: complement(421411..423222)
location: region:421411-423222:-1
so has part: feature:421411-423222:-1:exon
subclass of: SO_0000010

position:421411:-1
position: 421411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423222:-1
position: 423222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421411-423222:-1:exon

VA249_RS02025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02025
old locus tag: VYA_03900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020194001.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: penicillin-binding protein activator
translation: MMNHKRLSVPRLLTPVALAITLAACSSGPRQPNSVDITLEPTQSAQSYMIQADSTEGSLQNDWLIMATKAAIQANEWDQAELLIKRLARQQLTEVQQAEWQLARATIQQKQGNYSQLLKLLNFQPWWKLPSEQWKDYYSLRAEAYQSLNQPFEANRQLVSESQYASSAEQREISSRIWMNFARYSEYELTALQTDPSEEVLDGWLQLAIYSKTLANNIPQLKTTLERWLSENPSHPAAIYTPSEIQSILSLDIVKPNATALLLPLSGKFAPQAQLIRDGFIFAMMNDATRDPSATLTVIDTHAYSADEIKQRLINENIDFVVGPLQKENVELLQSTLDGSETGVAIPALALNIPEDVQPGTNMCYLALSPEQEVAQAAKYLFSQGYRYPLILAPTGSYGQRVVKAFDEEWDKYSSNKVATSYFGDKRQLQKNINDVFGLQESQQRIAQMQSLMRIPLETQPRSRRDVDAVYIVARSSELTLIKPFIEVAINPDAKPPKLFSNSRSNTGGTTYEDLSGVTYSDIPLLINADPTIASEMNELWSEQSNMEKRLEALGMDAYKLIGELPQMKAVPGYSTSGQTGVLSIDNNCVVQRELSWAERGAL
SIO_010081: VA249_RS02025
subclass of: SO_0000673
so part of: VA249_RS02025
location: complement(421411..423222)
location: region:421411-423222:-1
so has part: feature:421411-423222:-1:exon

WP_221068632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:421411-423222:-1:exon

VA249_RS02030
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rsmI
locus tag: VA249_RS02030
old locus tag: VYA_03910
so part of: sequence
location: 423291..424154
location: region:423291-424154:1
so has part: feature:423291-424154:1:exon
subclass of: SO_0000010

position:423291:1
position: 423291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424154:1
position: 424154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423291-424154:1:exon

VA249_RS02030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rsmI
locus tag: VA249_RS02030
old locus tag: VYA_03910
EC number: 2.1.1.198
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014205758.1
GO function: GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
translation: MTDKNKLPNEGPTLYIVPTPIGNLADITQRAIEVLSTVDMIAAEDTRHTGKLLSHFNIQTKTFALHDHNEQQKAQVLVEKLLSGQSIALVSDAGTPLISDPGYHLVTKCRQAGVRVVPLPGACAVITALSASGLPSDRFSFEGFLPPKSKGRKDKFLEIASVERTCIFYESPHRILDSLQDMLDVLGSEREVVLARELTKTFETIQGMPLGELIEWVKSDDNQQRGEMVLLIHGHRESSDESLPDEATRTLGILTKELPLKKAAALAAEIYNVKKNALYKWGLENLG
SIO_010081: VA249_RS02030
subclass of: SO_0000673
so part of: VA249_RS02030
location: 423291..424154
location: region:423291-424154:1
so has part: feature:423291-424154:1:exon

WP_211915418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423291-424154:1:exon

VA249_RS02035
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rnpB
locus tag: VA249_RS02035
so part of: sequence
location: 424436..424882
location: region:424436-424882:1
so has part: feature:424436-424882:1:exon
subclass of: SO_0000011

position:424436:1
position: 424436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424882:1
position: 424882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424436-424882:1:exon

VA249_RS02035
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1074311
nc RNA class: RNase_P_RNA
gene: rnpB
locus tag: VA249_RS02035
product: RNase P RNA component class A
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00010
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: VA249_RS02035
subclass of: SO_0000673
so part of: VA249_RS02035
location: 424436..424882
location: region:424436-424882:1
so has part: feature:424436-424882:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:424436-424882:1:exon

VA249_RS02040
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rsmH
locus tag: VA249_RS02040
old locus tag: VYA_03930
so part of: sequence
location: 425060..426010
location: region:425060-426010:1
so has part: feature:425060-426010:1:exon
subclass of: SO_0000010

position:425060:1
position: 425060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426010:1
position: 426010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425060-426010:1:exon

VA249_RS02040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rsmH
locus tag: VA249_RS02040
old locus tag: VYA_03930
EC number: 2.1.1.199
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000127227.1
GO function: GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
translation: MTETFQHISVLLNESIDGLAIKPDGIYIDGTFGRGGHSRTILSKLGENGRLYSIDRDPQAIAEANKINDPRFTIIHGPFSGMAQYAHDYDLVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDMRMDPTSGIPVSQWLMEADLDDITWVIREFGEDKHARRIAKAIVAYRENEENEPMVRTGQLARLISEAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALKGAASILAPEGRLSVISFHSLEDRMVKRFIRKESKGPEVPHGIPMTEAQIQALGSANMKPVGKAIKPTKQEIELNPRSRSSVLRIAEKL
SIO_010081: VA249_RS02040
subclass of: SO_0000673
so part of: VA249_RS02040
location: 425060..426010
location: region:425060-426010:1
so has part: feature:425060-426010:1:exon

WP_221068633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425060-426010:1:exon

VA249_RS02045
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: ftsL
locus tag: VA249_RS02045
old locus tag: VYA_03940
so part of: sequence
location: 426016..426333
location: region:426016-426333:1
so has part: feature:426016-426333:1:exon
subclass of: SO_0000010

position:426016:1
position: 426016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426333:1
position: 426333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426016-426333:1:exon

VA249_RS02045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: ftsL
locus tag: VA249_RS02045
old locus tag: VYA_03940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005428577.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein FtsL
translation: MTKPTPNLAKLIAIDLLTVGRWSLALMLLIFASAMGVVFATHHARQAITEKDLTLVERERLDSEWRNLMLEETALAEHSRVQDLAKKDLEMKRPDGDKEVVITLK
SIO_010081: VA249_RS02045
subclass of: SO_0000673
so part of: VA249_RS02045
location: 426016..426333
location: region:426016-426333:1
so has part: feature:426016-426333:1:exon

WP_128811677.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426016-426333:1:exon

VA249_RS02050
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02050
old locus tag: VYA_03950
so part of: sequence
location: 426330..428126
location: region:426330-428126:1
so has part: feature:426330-428126:1:exon
subclass of: SO_0000010

position:426330:1
position: 426330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428126:1
position: 428126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426330-428126:1:exon

VA249_RS02050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02050
old locus tag: VYA_03950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016799162.1
GO function: GO:0008658 - penicillin binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: penicillin-binding transpeptidase domain-containing protein
translation: MIGKRAKSKQGKPRTKLATKEKVAAAKSQTPPPETDPVEPESFLIRWRFQLLLFFVFCAFALLVGRVAYIQIIEPDNLIKQGDLRSVRVKAIPSARGIISDRNGEPLAVSVPVEAVWADPKTIFKEEALARTQSWYALADVLGLNRQELIDKIKRNENRRFIYLQRQVSPAMANYIRELKLPGVGLKSESRRYYPAGEVSAHLVGVTGIDGHGLEGVERSYDKWLTGEAGKKTIRKDRYGRVVENIALEEKQEGKPLQLTIDQRLQAIAYRAIKQAVADHRATSGSAVMLDVKTGAVLAMVNAPSYNPNNRSDWQSYKMRNRIITDSMEPGSTIKPFVILAALENGVADKDTVVDTGNGILQLGGSRVRDVSKVGKASLTQILKKSSNIGVTKLAMQMPVEALLGLYNSVGLGELSGLNLIGEVTGIFPTRTRWSPIERATISFGYGLSITPIQLVHAYATLGNLGKYEPVHMIESNDMDMSRQVVSKEHARQVLDMLETVTQKGGSARKAAVPGYRVGAKTGTSRKATAGGYSDEYITYTAGLAPVSDPRIALVVIVNEPQGDDYYGGSVASPVFSEIMKGALQILNIAPDENKFQQ
SIO_010081: VA249_RS02050
subclass of: SO_0000673
so part of: VA249_RS02050
location: 426330..428126
location: region:426330-428126:1
so has part: feature:426330-428126:1:exon

WP_221068634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426330-428126:1:exon

VA249_RS02055
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: murE
locus tag: VA249_RS02055
old locus tag: VYA_03960
so part of: sequence
location: 428199..429680
location: region:428199-429680:1
so has part: feature:428199-429680:1:exon
subclass of: SO_0000010

position:428199:1
position: 428199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429680:1
position: 429680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428199-429680:1:exon

VA249_RS02055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: murE
locus tag: VA249_RS02055
old locus tag: VYA_03960
EC number: 6.3.2.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_043877370.1
GO function: GO:0016881 - acid-amino acid ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
translation: MTKAISMDTLLSTWVDCPSLSSIRVSELELDSRRVQSGTTFVALIGHVVDGRKFIPAAIQQGANAVIAQACGEHSHGAIDIIEDVPVVYIEALDKCLSAMASKLYSYPEMALIGVTGTNGKTTITQLIAQWMDLVGSSAAVMGTTGNGFLANLKEAANTTGNAVEIQKTLASLAEQNAKYTALEVSSHGLIQGRVKALSFAAGVFTNLSRDHLDYHGTMEEYANAKRMLFTAHQCEQAIINVDDAVGAAWAKQLPNALAVSLKPNSEFEQAVFANHIAYAESGISIEFDGKFGDGTLCAPLIGEFNAANLMLALTTLLSLGFDKQTLLATAAKLQPVLGRMELFQTVGKAKVVVDYAHTPDALEKALQALRVHCQGELWAILGCGGDRDAGKRPMMANIAERLGDKVVLTDDNPRSEDPAQIMKDMLAGLSNPAQAIVQHDRFKALSYALENAASQDIILLAGKGHEDYQILNSGTIHYSDRESAMQLLGLSS
SIO_010081: VA249_RS02055
subclass of: SO_0000673
so part of: VA249_RS02055
location: 428199..429680
location: region:428199-429680:1
so has part: feature:428199-429680:1:exon

WP_221068635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428199-429680:1:exon

VA249_RS02060
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: murF
locus tag: VA249_RS02060
old locus tag: VYA_03970
so part of: sequence
location: 429677..431041
location: region:429677-431041:1
so has part: feature:429677-431041:1:exon
subclass of: SO_0000010

position:429677:1
position: 429677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431041:1
position: 431041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429677-431041:1:exon

VA249_RS02060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: murF
locus tag: VA249_RS02060
old locus tag: VYA_03970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010646527.1
GO function: GO:0047480 - UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
translation: MISITLSEIANITTGELIGNDMSIESVSTDTRAIEQGALFVALVGERFDAHDFCQQAIESGAGALLVQKTLDVNVPQVLVADTKVALGKLAAWIHQSCQTSTVAITGSCGKTTVKEMVASILQRKGRVLFTAGNFNNDIGVPLTLLRSQQDDDYAVIELGANHIGEIAYTTQLVKPDIAMVNNVAAAHLEGFGSIDGVKQAKGEIYQGLPVGGKAIVNLDSNGGTLWESVLADKEVITFSSHNTEADFYASNIVMNSAGEASFNLHIAASSQEIELSLGIIGQHNVANAIAASIIALQFGATLEDVRLGLKHLNKVKGRVEVDELNDKIKLIDDSYNASVPAMKAAVDLLGAFQGERWLILGNMAELGQESLALHRQVGEHAAPQKFEHVLTYGTDAKVISELCDGIHFETHPEMIDYIKQHLDLSAPENHTLLVKGANGARMFEVAAALKEYY
SIO_010081: VA249_RS02060
subclass of: SO_0000673
so part of: VA249_RS02060
location: 429677..431041
location: region:429677-431041:1
so has part: feature:429677-431041:1:exon

WP_221068636.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429677-431041:1:exon

VA249_RS02065
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: mraY
locus tag: VA249_RS02065
old locus tag: VYA_03980
so part of: sequence
location: 431041..432123
location: region:431041-432123:1
so has part: feature:431041-432123:1:exon
subclass of: SO_0000010

position:432123:1
position: 432123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431041-432123:1:exon

VA249_RS02065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: mraY
locus tag: VA249_RS02065
old locus tag: VYA_03980
EC number: 2.7.8.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011149501.1
GO function: GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospho-N-acetylmuramoyl-pentapeptide- transferase
translation: MIIWLADLLQPYLSFFRLFEYLSFRAILSVLTALGLSLWMGPIMIKRLQMLQIGQVVRNEGPESHFSKRGTPTMGGIMILAAITITILLWSDLSNPYVWAVLTVLLGYGAVGFVDDYRKVVRKNTDGLIARWKYFWQSLIAFVVAFALYAYGKDTAATQLVVPFFKDIMPQLGLMYIILTYFVIVGTSNAVNLTDGLDGLAIMPTVLVAAGFAVIAWATGNVNFSEYLHIPYLPHASELVVVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGALGTIAVLVRQELVLVIMGGVFVMETLSVILQVGSYKLRGQRIFRMAPIHHHYELKGWPEPRVIVRFWIISMVLVLVGLATLKVR
SIO_010081: VA249_RS02065
subclass of: SO_0000673
so part of: VA249_RS02065
location: 431041..432123
location: region:431041-432123:1
so has part: feature:431041-432123:1:exon

WP_128811673.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:431041-432123:1:exon

VA249_RS02070
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: murD
locus tag: VA249_RS02070
old locus tag: VYA_03990
so part of: sequence
location: 432162..433475
location: region:432162-433475:1
so has part: feature:432162-433475:1:exon
subclass of: SO_0000010

position:432162:1
position: 432162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433475:1
position: 433475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432162-433475:1:exon

VA249_RS02070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: murD
locus tag: VA249_RS02070
old locus tag: VYA_03990
EC number: 6.3.2.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011149502.1
GO function: GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
translation: MERWQNIRKVVVVGLGITGLSVVKHLTKNQPQLTVKVIDTRANPPGAEHLPAQVELYSGGWNIEWLADAELVVTNPGIALATPEIQTVLAKGTPVVGDIELFAWAVQKPVVAITGSNGKSTVTDLTGVMAKAAGLTVGVGGNIGVPALDLLEKDADLYVLELSSFQLETTSSLKLKAAAFLNLSEDHMDRYEGMNDYRASKLRIFDNAELAVVNRDDQETFPDVEMPLVTFGSDELAFGLESDGHRTWLVDDGQRVIASDELKLVGKHNLANALVVLALLKAADVDYHKALNALKTYTGLTHRCQAVADNRGVKWVNDSKATNIASTMAALSGLESKGKLYLLVGGVGKGADFTPLRPILATLNLQLCCFGADGDQFMPLHESAIRFDTMEDVIQQISSQLKTGDMVMLSPACASFDQFDNFMARGDAFAALAEKYA
SIO_010081: VA249_RS02070
subclass of: SO_0000673
so part of: VA249_RS02070
location: 432162..433475
location: region:432162-433475:1
so has part: feature:432162-433475:1:exon

WP_221068637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:432162-433475:1:exon

VA249_RS02075
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: ftsW
locus tag: VA249_RS02075
old locus tag: VYA_04000
so part of: sequence
location: 433494..434690
location: region:433494-434690:1
so has part: feature:433494-434690:1:exon
subclass of: SO_0000010

position:433494:1
position: 433494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434690:1
position: 434690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433494-434690:1:exon

VA249_RS02075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: ftsW
locus tag: VA249_RS02075
old locus tag: VYA_04000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012126986.1
GO process: GO:0051301 - cell division [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein FtsW
translation: MGLGNVKRSIGTWLKHPAPEALFDRQLVWIALGLMLTGLVMVTSASFPISSRLTDQPFHFMFRHATFLVLALGASAVILQVPLQHWFKKSHYLLWLSFGLLIIVLVAGKSVNGASRWIPLGLFNLQPAEVAKLSLFVFMSGYLVRKQDEVRQTFFGGFMKPIMVFAALAVLLLGQPDLGTVVVMLVTLFGMLFIAGAKLTQFLALMIAGIAAVVGLIFIEPYRIRRVTSFMDPWEDPFGSGYQLTQSLMAFGRGEWFGQGLGNSIQKLEYLPEAHTDFVFAVLAEELGFVGVVLVLMLIFSLVLKAIYIGKRAFEEGELFGGYLSFGIGIWFAFQTLVNVGAAAGIVPTKGLTLPLISYGGSSLIIMSVAVSILLRIDHECRVKRGEKESEQQVNEEK
SIO_010081: VA249_RS02075
subclass of: SO_0000673
so part of: VA249_RS02075
location: 433494..434690
location: region:433494-434690:1
so has part: feature:433494-434690:1:exon

WP_221068638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433494-434690:1:exon

VA249_RS02080
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: murG
locus tag: VA249_RS02080
old locus tag: VYA_04010
so part of: sequence
location: 434677..435744
location: region:434677-435744:1
so has part: feature:434677-435744:1:exon
subclass of: SO_0000010

position:434677:1
position: 434677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435744:1
position: 435744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434677-435744:1:exon

VA249_RS02080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: murG
locus tag: VA249_RS02080
old locus tag: VYA_04010
EC number: 2.4.1.227
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020194008.1
GO function: GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
translation: MKKNKRLMVMAGGTGGHVFPGLAVAKQLQEQGWEIRWLGTADRMEADLVPKHGIEIDFIKVKGLRGQGVKRLLAAPFQIINAIKQARAHMKRWQPDAVLGMGGYVSGPGGIAAWMSGIPVVLHEQNAVAGLTNQWLSKIAKKVFQAFPGAFPHAEVVGNPVREDVTQLVSPTERMQERQGPIRILVMGGSQGARILNQTLPEVMAKLGEDYCIRHQAGKGAAEEVSAAYQANSVVNAEVTEFIDDVAEAYSWADLLVCRSGALTVSEVSAAGVGAIFVPFMHKDRQQALNADHLVDCGAAKMIEQPDLTVESLTQQIQRLDRRALLTMAEQARGAAKLNADRVVAQAIVALTEKR
SIO_010081: VA249_RS02080
subclass of: SO_0000673
so part of: VA249_RS02080
location: 434677..435744
location: region:434677-435744:1
so has part: feature:434677-435744:1:exon

WP_221068639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:434677-435744:1:exon

VA249_RS02085
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: murC
locus tag: VA249_RS02085
old locus tag: VYA_04020
so part of: sequence
location: 435767..437227
location: region:435767-437227:1
so has part: feature:435767-437227:1:exon
subclass of: SO_0000010

position:435767:1
position: 435767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437227:1
position: 437227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435767-437227:1:exon

VA249_RS02085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: murC
locus tag: VA249_RS02085
old locus tag: VYA_04020
EC number: 6.3.2.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005387395.1
GO function: GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramate--L-alanine ligase
translation: MTIQHTQDLAQIRAMVPEMRRVKSIHFIGIGGAGMSGIAEVLLNEGYQITGSDLSENPVTERLVSKGATVFIGHQASNVEKASVVVVSTAINEENPEVMAARELRIPIVRRAEMLAELMRFRHGIAVAGTHGKTTTTALVTQIYSEAGLDPTFVNGGLVKSAGTNARLGSSRILIAEADESDASFLHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPVIRELIPRISRQVITYGFSEDADVRIENYHQQGQQGKFTVVREGRANLDITLNIPGRHNALNASAAIAVATEDDINDDAILKAMAGTQGTGRRFDHLGEFDTGNGQAMLVDDYGHHPTEVGVTISAARSGWQDKRLVMIFQPHRYSRTRDLYDDFANVLEQVDVLIMLDVYAAGEKPIAGADGRALCRTIRSRGKIDPIFVPEIEQLPSVLANVIQDGDLILTQGAGDVGKVAKQLAALELNVNKMLEQ
SIO_010081: VA249_RS02085
subclass of: SO_0000673
so part of: VA249_RS02085
location: 435767..437227
location: region:435767-437227:1
so has part: feature:435767-437227:1:exon

WP_164837220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:435767-437227:1:exon

VA249_RS02090
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02090
old locus tag: VYA_04030
so part of: sequence
location: 437414..438199
location: region:437414-438199:1
so has part: feature:437414-438199:1:exon
subclass of: SO_0000010

position:437414:1
position: 437414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438199:1
position: 438199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437414-438199:1:exon

VA249_RS02090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02090
old locus tag: VYA_04030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005436132.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein FtsQ/DivIB
translation: MLNVALNEERPKSDHNRGRQEKLLGAVFFVIVVTLISSVLYSAISWMWDDQRLPLSKIVLQGKLEYVTADDVQSAFGNIDHIGTFMSQDIDVLQQSVEALPWVAHAAIRKQWPDTVKVFLTEHHPEAIWNGIELLDGNGFVFEGDVGLLKEEKVKLYGPKETGPEVLQTYRELRPKFQKLGLAISSLVLNERRAWQIILDNGIRLELGKESLDERIERFILLYNKLGSDTQRISYIDLRYDTGAAVGWFPEHELEQESTDD
SIO_010081: VA249_RS02090
subclass of: SO_0000673
so part of: VA249_RS02090
location: 437414..438199
location: region:437414-438199:1
so has part: feature:437414-438199:1:exon

WP_128812334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437414-438199:1:exon

VA249_RS02095
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: ftsA
locus tag: VA249_RS02095
old locus tag: VYA_04040
so part of: sequence
location: 438192..439460
location: region:438192-439460:1
so has part: feature:438192-439460:1:exon
subclass of: SO_0000010

position:438192:1
position: 438192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439460:1
position: 439460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438192-439460:1:exon

VA249_RS02095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: ftsA
locus tag: VA249_RS02095
old locus tag: VYA_04040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000167613.1
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0051301 - cell division [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein FtsA
translation: MTKVADDNIIVGLDIGTATVSALVGEILPDGQINIIGSGSSPSRGMDKGGVNDLESVVKSVQRAIDQAELMAECQISRVFISLSGKHIASRIEKGMGTISDEEVSQEDMDRAIHTAKSIKIGDEQRILHVIPQEFTIDYQEGIKNPLGLSGVRMEVSVHLISCHNDMARNIIKAVERCGLKVEQLVFSGLAASNAVITEDERELGVCVVDIGAGTMDVSIWTGGALRHTEVFSYAGNAVTSDIAFAFGTPVSDAEEIKVKYGCALSELVSKDDTVNVPSVGGRPSRSLQRQTLSEVIEPRYSELMGLVNQTIDSVQAKLREEGIKHHLAAGVVLTGGAAQIEGVVECAERVFRNQVRVGKPLEVSGLTDYVKEPYHSTAVGLLHYARDMQSSDDSDYNEPKRSSSSVTGFIGKLRNWIKNEF
SIO_010081: VA249_RS02095
subclass of: SO_0000673
so part of: VA249_RS02095
location: 438192..439460
location: region:438192-439460:1
so has part: feature:438192-439460:1:exon

WP_128811668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438192-439460:1:exon

VA249_RS02100
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: ftsZ
locus tag: VA249_RS02100
old locus tag: VYA_04050
so part of: sequence
location: 439491..440726
location: region:439491-440726:1
so has part: feature:439491-440726:1:exon
subclass of: SO_0000010

position:439491:1
position: 439491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440726:1
position: 440726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439491-440726:1:exon

VA249_RS02100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: ftsZ
locus tag: VA249_RS02100
old locus tag: VYA_04050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010434749.1
GO function: GO:0003924 - GTPase activity [Evidence IEA]
GO process: GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein FtsZ
translation: MFEPMMEMSDDAVIKVVGVGGGGGNAVEHMVRESIEGVEFISVNTDAQALRKTSVGNVIQIGGDITKGLGAGANPQVGREAALEDRDRIKDSLTGADMVFIAAGMGGGTGTGAAPVIAEVAKELGILTVAVVTKPFSFEGKKRLAFAEQGIDELSKHVDSLITIPNEKLLKVLGRGVTLLEAFASANDVLKNAVQGIAELITRPGMINVDFADVRTVMSEMGHAMMGSGIAKGEDRAEEAAEMAISSPLLEDIDLAGARGVLVNITAGLDMRLDEFETVGNTVKAFASDNATVVIGTSLDPDMTDEIRVTVVATGIGNEKKPDITLVAGGKAKVAPTAAPQVQQQTIAPQAEEKPAQTLQSTPMQEKAQVTPQSTNTVSSSVPASQTSAAPKQEKESGYLDIPAFLRRQAD
SIO_010081: VA249_RS02100
subclass of: SO_0000673
so part of: VA249_RS02100
location: 439491..440726
location: region:439491-440726:1
so has part: feature:439491-440726:1:exon

WP_221068640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439491-440726:1:exon

VA249_RS02105
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: lpxC
locus tag: VA249_RS02105
old locus tag: VYA_04060
so part of: sequence
location: 440828..441745
location: region:440828-441745:1
so has part: feature:440828-441745:1:exon
subclass of: SO_0000010

position:440828:1
position: 440828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441745:1
position: 441745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440828-441745:1:exon

VA249_RS02105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: lpxC
locus tag: VA249_RS02105
old locus tag: VYA_04060
EC number: 3.5.1.108
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012551094.1
GO function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity [Evidence IEA]
GO process: GO:0009245 - lipid A biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-3-O-acyl-N-acetylglucosamine deacetylase
translation: MIRQRTLKEIVKTTGVGLHSGRKVTLTLRPAAANTGIIYRRTDVNPPVDFPADPASVRDTMLCTALVNDQGIRISTVEHLNAALAGMGIDNIVVEVDAPEIPIMDGSASPFVYLLQQAGIETQNAPKRFIRIKKPVRFEDGDKWAEFVPFNGFRMDFEIDFNHPAIESDEQRLMFDFSSQGFVREISRARTFGFMRDIEYLQSQNLVLGGSFDNAIVLDDYRILNEEGLRFENEFVTHKVLDAIGDLYMCGHAIIGEFRAYKSGHGLNNQLLRAVLADQEAWEWTTFEEEVGSPVAFAEPNMVLA
SIO_010081: VA249_RS02105
subclass of: SO_0000673
so part of: VA249_RS02105
location: 440828..441745
location: region:440828-441745:1
so has part: feature:440828-441745:1:exon

WP_128811666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440828-441745:1:exon

VA249_RS02110
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02110
old locus tag: VYA_04070
so part of: sequence
location: complement(441862..442320)
location: region:441862-442320:-1
so has part: feature:441862-442320:-1:exon
subclass of: SO_0000010

position:441862:-1
position: 441862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442320:-1
position: 442320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441862-442320:-1:exon

VA249_RS02110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02110
old locus tag: VYA_04070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005528694.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DciA family protein
translation: MRDHRPTSTDDLIAESQFKQIQEHAGDILQLNQALQDILPKGTADHCRVANIRNGHLLIDVASASLKMKIDYDRLMILNKLRTQGYAKLMSVEVRINPSLYRNRFEHDDRPKRPPLTEAAANSLMIIADMAPPKIQERLKRLADMAEKKSEL
SIO_010081: VA249_RS02110
subclass of: SO_0000673
so part of: VA249_RS02110
location: complement(441862..442320)
location: region:441862-442320:-1
so has part: feature:441862-442320:-1:exon

WP_221068641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441862-442320:-1:exon

VA249_RS02115
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: secA
locus tag: VA249_RS02115
old locus tag: VYA_04080
so part of: sequence
location: 442740..445469
location: region:442740-445469:1
so has part: feature:442740-445469:1:exon
subclass of: SO_0000010

position:442740:1
position: 442740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445469:1
position: 445469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442740-445469:1:exon

VA249_RS02115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: secA
locus tag: VA249_RS02115
old locus tag: VYA_04080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005480838.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecA
translation: MITKLLTKVIGSRNDRTLRRLRKIVKEINNYEPTFEALSDEELKAKTVEFRERLEQGETLDKLLPEAFATVREASKRVYGMRHFDVQLIGGMVLNAGQIAEMRTGEGKTLTATLPAYLNALPGKGVHVVTVNDYLATRDAETNRPLFEFLGMTVGINVPNMPPQAKKEAYQADILYGTNNEFGFDYLRDNMAFRNEDRVQRERFFAVVDEVDSILIDEARTPLIISGPAEDSSELYTRINLLIPHLQKQDKEDSEEYRGDGHYTVDEKSKQVYLTETGQEFVEELMVKNGLMEEGDTLYSPTNISLLHHVNAALRAHVLFERNVDYIVNDDGEVVIVDEHTGRTMPGRRWSEGLHQAVEAKEGVKIQNENQTLASITFQNYFRLYEKLSGMTGTADTEAFEFQSIYGLETVVIPTNKPMIRNDMPDVVYRTEAEKFAAIIEDIKERVEKGQPSLVGTVSIEKSELLSNALKKAKVKHNVLNAKFHEKEAEIVAEAGKPGAVTIATNMAGRGTDIVLGGSWQAKVETLENPTKEQIQEIKAEWKQVHDQVLEAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDSLLRIFTSDRMASLIQSGMEEGEAIESKMLSRSIEKAQRKVEGRNFDIRKQLLEYDDVANDQRKVVYELRDELMNVDDISEMIEQNREDVITAIIDEYIPPQSLEDMWDVEGLQERLKADFDLDAPVKQWLEEDDKLYEEALREKIINLAVEVYKAKEEVVGAQVLRNFEKSVMLQTLDTLWKEHLAAMDHLRQGIHLRGYAQKNPKQEYKRESFELFEGLLEALKTDVITVLSRVRVQQQEEVERMEEQRRAQAEEAARRAQAQHAAAQNPLTEGEEPEEANHQPMVRDERKVGRNEPCPCGSGKKYKQCHGKID
SIO_010081: VA249_RS02115
subclass of: SO_0000673
so part of: VA249_RS02115
location: 442740..445469
location: region:442740-445469:1
so has part: feature:442740-445469:1:exon

WP_211915408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442740-445469:1:exon

VA249_RS02120
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: mutT
locus tag: VA249_RS02120
old locus tag: VYA_04090
so part of: sequence
location: 445543..445941
location: region:445543-445941:1
so has part: feature:445543-445941:1:exon
subclass of: SO_0000010

position:445543:1
position: 445543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445941:1
position: 445941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445543-445941:1:exon

VA249_RS02120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: mutT
locus tag: VA249_RS02120
old locus tag: VYA_04090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008222857.1
GO function: GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 8-oxo-dGTP diphosphatase MutT
translation: MKRIHIVAAIIFNQDKSQIFITKRPDDKHKGGFWEFPGGKVENGESAEQAMIRELEEEIGIQVTEQTLFEHLEYDYPEKSLKFDFMLVSQFDRQPYGREGQEGRWVDVGALLDYVFPEANVPILERVVKEFS
SIO_010081: VA249_RS02120
subclass of: SO_0000673
so part of: VA249_RS02120
location: 445543..445941
location: region:445543-445941:1
so has part: feature:445543-445941:1:exon

WP_221068642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:445543-445941:1:exon

VA249_RS02125
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: dapB
locus tag: VA249_RS02125
old locus tag: VYA_04100
so part of: sequence
location: 446054..446863
location: region:446054-446863:1
so has part: feature:446054-446863:1:exon
subclass of: SO_0000010

position:446054:1
position: 446054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446863:1
position: 446863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446054-446863:1:exon

VA249_RS02125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: dapB
locus tag: VA249_RS02125
old locus tag: VYA_04100
EC number: 1.17.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017421307.1
GO function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxy-tetrahydrodipicolinate reductase
translation: MVRIAIAGAAGRMGRNLVKASHLHSEASVTAGSERPESSLVGVDIGELCGDGKFDVFLTDDLAKVIDNFDVVIDFTAPVSTLANLELCKQHGKSIVIGTTGFSEEEREQIDDAAKQVPIVMAPNYSVGVNLVFKLLEKAAKVMGEYCDIEIIEAHHRHKVDAPSGTAIGMGEAIAGAMGNKLNDVAVYAREGITGERTKDEIGFATIRAGDIVGEHTAMFADIGERVEITHKATDRMTFANGAVKAAVWLNSKPSGFYTMTDVLGLNEL
SIO_010081: VA249_RS02125
subclass of: SO_0000673
so part of: VA249_RS02125
location: 446054..446863
location: region:446054-446863:1
so has part: feature:446054-446863:1:exon

WP_221068643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:446054-446863:1:exon

VA249_RS02130
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: carA
locus tag: VA249_RS02130
old locus tag: VYA_04110
so part of: sequence
location: 447345..448484
location: region:447345-448484:1
so has part: feature:447345-448484:1:exon
subclass of: SO_0000010

position:447345:1
position: 447345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448484:1
position: 448484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447345-448484:1:exon

VA249_RS02130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: carA
locus tag: VA249_RS02130
old locus tag: VYA_04110
EC number: 6.3.5.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004744942.1
GO component: GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO function: GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO process: GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
translation: MGKLALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTGTNSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRILREKGAQNGCIVAGNNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGSWTLEGGLPEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDGVFLSNGPGDPEPCTYAIEATKVFLEKDLPIFGICLGHQILALASGAQTVKMKFGHHGANHPVKDLERNVVMITSQNHGFAADEATLPENLRATHVSLFDGSLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIKKHSA
SIO_010081: VA249_RS02130
subclass of: SO_0000673
so part of: VA249_RS02130
location: 447345..448484
location: region:447345-448484:1
so has part: feature:447345-448484:1:exon

WP_077261904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447345-448484:1:exon

VA249_RS02135
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: carB
locus tag: VA249_RS02135
old locus tag: VYA_04120
so part of: sequence
location: 448501..451734
location: region:448501-451734:1
so has part: feature:448501-451734:1:exon
subclass of: SO_0000010

position:448501:1
position: 448501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451734:1
position: 451734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448501-451734:1:exon

VA249_RS02135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: carB
locus tag: VA249_RS02135
old locus tag: VYA_04120
EC number: 6.3.5.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011078652.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbamoyl-phosphate synthase large subunit
translation: MPKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMADATYIEPIQWEVVRNIIAKEKPDAVLPTMGGQTALNCALDLEKHGVLEEFGVEMIGATADAIDKAEDRSRFDKAMKSIGLECPRADTAKTMEEAYGVLDMVGFPCIIRPSFTMGGTGGGIAYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCAIENFDPMGIHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMNPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELMNDITGGATPASFEPTIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGFDEMVDLDAPDALTKIRHELKEAGAERIWYIADAFRAGMSVDGVFNLTQIDRWFLVQIEDIVKLEQELKAKGFAGLNKDELIKLKRKGFADARLSKILGVAESEIRRLRDQYDIHPVYKRVDTCAAEFSSDTAYMYSSYDEECEANPSDKDKIMILGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLAIARVEKPKGVIVQYGGQTPLKLARALEAAGVPIIGTSPDAIDRAEDRERFQVAVDRLGLLQPQNATVTTMEQAVEKSREIGFPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDIDAICDGERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRGLMNTQFAVKDNEVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMAGQSLEAQGFTKEIIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGTTFAEAYAKAELGCGNVYPEGGRALLSVREGDKQRVVDLASKLTKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNNEYTYIVNTASGRQAIEDSKVLRRGALAEKVNYTTTLNAAFATCMAHTADAKSSVTSVQELHAKVKASLEA
SIO_010081: VA249_RS02135
subclass of: SO_0000673
so part of: VA249_RS02135
location: 448501..451734
location: region:448501-451734:1
so has part: feature:448501-451734:1:exon

WP_221068644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448501-451734:1:exon

VA249_RS02140
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02140
old locus tag: VYA_04130
so part of: sequence
location: 451935..452714
location: region:451935-452714:1
so has part: feature:451935-452714:1:exon
subclass of: SO_0000010

position:451935:1
position: 451935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452714:1
position: 452714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451935-452714:1:exon

VA249_RS02140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02140
old locus tag: VYA_04130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010646540.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TSUP family transporter
translation: MEITFEILIALFFVASAAGFIDAMAGGGGLLTLPALLAAGLSPTQALATNKLQSSFGSFSASLYFVRNGIVSLKEMRLAIACTFIGSAIGAEAVQFIDAGILTSLIPVLLIAISLYFLLAPSSKATNDEPKISEAMFALCVGGGVGFYDGFFGPGTGSIFALCFVVLGQFSLVDATARTKILNFTSNIAALLFFILAGLPVWEIGLTMAVGGFIGAQLGAKVVVTKGQKWIRPLVITMSMLMAAKLLWQQHQQWLLSWF
SIO_010081: VA249_RS02140
subclass of: SO_0000673
so part of: VA249_RS02140
location: 451935..452714
location: region:451935-452714:1
so has part: feature:451935-452714:1:exon

WP_221068645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:451935-452714:1:exon

VA249_RS02145
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02145
old locus tag: VYA_04140
so part of: sequence
location: complement(452650..453510)
location: region:452650-453510:-1
so has part: feature:452650-453510:-1:exon
subclass of: SO_0000010

position:452650:-1
position: 452650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453510:-1
position: 453510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452650-453510:-1:exon

VA249_RS02145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02145
old locus tag: VYA_04140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014230815.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MLLESIETLLVLSKEKTMSHTGSQLYISQSAVSKRIANLEKKLGKKLIEPHGRHIKLTSDAIALIRTIEPTFNELRGQIYDQQELEDTSLIKLDCSETLVAGYLSLIMETRLVQDPYIRISTNHTPRIVENVKSGRATLGFCAGYLPPHHGLMSFHLADEPFSIISKHALDSLPTAILTNDLSNPANTYQQAVLSKHNIQPLMEMDSYTAAAQLALGGMAPALIPKSIIKTLKIAPQYCYEFEELSSLIRPISICLRHNAYRNNRIKTMIEAIADVVAKEVLPPST
SIO_010081: VA249_RS02145
subclass of: SO_0000673
so part of: VA249_RS02145
location: complement(452650..453510)
location: region:452650-453510:-1
so has part: feature:452650-453510:-1:exon

WP_221068646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:452650-453510:-1:exon

VA249_RS02150
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02150
old locus tag: VYA_04150
so part of: sequence
location: complement(453640..454260)
location: region:453640-454260:-1
so has part: feature:453640-454260:-1:exon
subclass of: SO_0000010

position:453640:-1
position: 453640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454260:-1
position: 454260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453640-454260:-1:exon

VA249_RS02150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02150
old locus tag: VYA_04150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000381506.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRIC cation channel family protein
translation: MDSMLLYMIDLFGTAVFAVSGVLLAGRLKMDPFGVIVLGCVTAIGGGTIRDMALGATPVFWITDTTYLWVIFITCLLTMILVRRPKRLSWWVLPVCDAIGLAVFVGIGVEKALAYNASGMVAVIMGVITGCGGGIIRDVLAREVPMVLRSEVYATACIIGGIFHTTALTMGYDHSAALLAGVISTLVIRLGAIRWHLSLPTFAINR
SIO_010081: VA249_RS02150
subclass of: SO_0000673
so part of: VA249_RS02150
location: complement(453640..454260)
location: region:453640-454260:-1
so has part: feature:453640-454260:-1:exon

WP_128811657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453640-454260:-1:exon

VA249_RS02155
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: btuF
locus tag: VA249_RS02155
old locus tag: VYA_04160
so part of: sequence
location: complement(454337..455161)
location: region:454337-455161:-1
so has part: feature:454337-455161:-1:exon
subclass of: SO_0000010

position:454337:-1
position: 454337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455161:-1
position: 455161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454337-455161:-1:exon

VA249_RS02155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: btuF
locus tag: VA249_RS02155
old locus tag: VYA_04160
EC number: 7.6.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009707723.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: vitamin B12 ABC transporter substrate-binding protein BtuF
translation: MKNLCFALPLIFSAVSFANEPVQRVISLAPHATEIAYAAGLGDKLIAVSEMSDYPEQAKDLEKVSNYQGIKLERIIALQPDLVIAWPAGNPAKELDKLKQFGIPIYYSTTGSLEDIAKNIEQLSLYSEKPEVGQKAAASFRAQLEALKEKYNTEDKVSYFYQLSEKPIITVAGKNWPSEVFTFCGGNNIFAKGNAPYPQVSIEQVITRQPEVLFTSRHAMSHDGMWVTWKDEIPALKNSHTWTLNSDWINRPTPRTLNAITEVCEHFESVRQKR
SIO_010081: VA249_RS02155
subclass of: SO_0000673
so part of: VA249_RS02155
location: complement(454337..455161)
location: region:454337-455161:-1
so has part: feature:454337-455161:-1:exon

WP_221068647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:454337-455161:-1:exon

VA249_RS02160
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02160
old locus tag: VYA_04170
so part of: sequence
location: complement(455161..456114)
location: region:455161-456114:-1
so has part: feature:455161-456114:-1:exon
subclass of: SO_0000010

position:456114:-1
position: 456114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455161-456114:-1:exon

VA249_RS02160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02160
old locus tag: VYA_04170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020194017.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cobalamin biosynthesis family protein
translation: MEETFQQFYANGALLVMWGALLFHLLIPIPHSAHPVTLWHKFAEQLASKVNNNHSYSQSILSGGLALLLMLVPCLILLLAMKPLVWQAPLFELALLLIALDWRNNESLAKQLVTAMSKENKAQCRALLKPYLNRDTESLSLLGIGKAGAETIIMGYGRNVVCVLFWYGLTGGIGALMYRLTAELARAWSPSRRQYSPFGKPVIKLTAALEIIPLRLFAMFIGVGKNVSSIFTSMIQQAKSWPLPGPAWLLCSIGSKLQLSLGGPALYQGLRAERAKLGGRIAPSAIHLAQIQTLIVWRIFAWIIIQSLILGFIYQGL
SIO_010081: VA249_RS02160
subclass of: SO_0000673
so part of: VA249_RS02160
location: complement(455161..456114)
location: region:455161-456114:-1
so has part: feature:455161-456114:-1:exon

WP_221068648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455161-456114:-1:exon

VA249_RS02165
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: mtnN
locus tag: VA249_RS02165
old locus tag: VYA_04180
so part of: sequence
location: complement(456129..456824)
location: region:456129-456824:-1
so has part: feature:456129-456824:-1:exon
subclass of: SO_0000010

position:456129:-1
position: 456129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456824:-1
position: 456824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456129-456824:-1:exon

VA249_RS02165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: mtnN
locus tag: VA249_RS02165
old locus tag: VYA_04180
EC number: 3.2.2.16
EC number: 3.2.2.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011149517.1
GO function: GO:0008782 - adenosylhomocysteine nucleosidase activity [Evidence IEA]; GO:0008930 - methylthioadenosine nucleosidase activity [Evidence IEA]
GO process: GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
translation: MKVGIIGAMEQEVTILKEAMTNCQTVNKAGCTFFSGQINNVDVVLLQSGIGKVAAAVGTTILLDEYQPDVVINTGSAGGFDSSLNLGDVVISTEVRHHDADVTAFGYEIGQMAGQPAAFKADEKLMDLAEKALAQMENTHAVRGLICTGDAFVCTAERQEFICKHFPSVIAVEMEASAIAQTCHQFNTPFVVVRAISDVADKESPMSFEEFLPLAAKSSSEMVFKMLELTK
SIO_010081: VA249_RS02165
subclass of: SO_0000673
so part of: VA249_RS02165
location: complement(456129..456824)
location: region:456129-456824:-1
so has part: feature:456129-456824:-1:exon

WP_221068651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:456129-456824:-1:exon

VA249_RS02170
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02170
old locus tag: VYA_04190
so part of: sequence
location: complement(456890..457318)
location: region:456890-457318:-1
so has part: feature:456890-457318:-1:exon
subclass of: SO_0000010

position:456890:-1
position: 456890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457318:-1
position: 457318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456890-457318:-1:exon

VA249_RS02170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02170
old locus tag: VYA_04190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012127004.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1499 domain-containing protein
translation: MKKAALLSITLLGLTACSQGITTMTDRSLSPCGDKPNCVSTQDSREEHNLTPFTLNDSVTIEAIEQVALKLPGAKTAVKDDNYLRIECTSKIMRFVDDLELKIEGDKLIVRSESRVGYSDFGVNRKRADQLRSLLTNAELIK
SIO_010081: VA249_RS02170
subclass of: SO_0000673
so part of: VA249_RS02170
location: complement(456890..457318)
location: region:456890-457318:-1
so has part: feature:456890-457318:-1:exon

WP_221068652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:456890-457318:-1:exon

VA249_RS02175
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02175
old locus tag: VYA_04200
so part of: sequence
location: complement(457409..458821)
location: region:457409-458821:-1
so has part: feature:457409-458821:-1:exon
subclass of: SO_0000010

position:457409:-1
position: 457409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458821:-1
position: 458821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457409-458821:-1:exon

VA249_RS02175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02175
old locus tag: VYA_04200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004415502.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MSQNVYQFIDVQRVDPAKKPIKIRKIEFVEIYEPFTRQQATAQADRCLDCGNPYCEWKCPVHNYIPQWLKLANEGRILEAAELSHQTNSLPEVCGRVCPQDRLCEGSCTLNDDFGAVTIGNIEKYITDKAFEMGWKPDMSKVEWTDKKVAIIGAGPAGLAAADVLIRNGVKPVVFDRYPEIGGLLTFGIPSFKLEKGVMENRRRIFSEMGIEFRMNVEVGKDVQMQELLDEYDAIFLGVGTYKYMRAGLENETAPGVYDALPFLISNTYKVMNLEHNQPFIDMAKQRVVVLGGGDTAMDCVRTSIRQGASNVVCAYRRDEANMPGSRREVKNAKEEGVKFMFNLQPLGIEVDALGHVSGVKVVKTALGEPDDAGRRRPEPVEGSEHVLPADVVIMAFGFQPHKMEWLTPFDVDLDQWGRIKAPAKQEFQFQTSNEKIFAGGDAVRGSDLVVTAIDEGRKAADGILDYLEV
SIO_010081: VA249_RS02175
subclass of: SO_0000673
so part of: VA249_RS02175
location: complement(457409..458821)
location: region:457409-458821:-1
so has part: feature:457409-458821:-1:exon

WP_221068654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:457409-458821:-1:exon

VA249_RS02180
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: gltB
locus tag: VA249_RS02180
old locus tag: VYA_04210
so part of: sequence
location: complement(458842..463305)
location: region:458842-463305:-1
so has part: feature:458842-463305:-1:exon
subclass of: SO_0000010

position:458842:-1
position: 458842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463305:-1
position: 463305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458842-463305:-1:exon

VA249_RS02180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: gltB
locus tag: VA249_RS02180
old locus tag: VYA_04210
EC number: 1.4.1.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001240200.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO process: GO:0006537 - glutamate biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate synthase large subunit
translation: MALYDPSLEKDNCGFGLIAHMEGEQSHKLVRTAISALDRMTHRGGIAADGKTGDGCGLLLQKPDSYLRLIAEENGYNLGKQYAIGMIFFSQDPVKAQISKDIINKELAQETLTVAGWREVPTNSEVLGPIAADSLPNIQQVFISAPAGWRERDIERRLYIARRRIEKQITEDPDFYICSLSTQVLVYKGLCMPADLPRFYLDLADLRMESAICLFHQRFSTNTQPRWPLAQPFRYLAHNGEINTIEGNRQWARARAYKFSSPLLPDLQTAAPFVNETGSDSSSLDNMLDLFLSGGMDIFRAMRMLVPPAWQNHPDMDPDLRAFYDFNSKHMEPWDGPAGIVLSDGRYAACNLDRNGLRPARYVITKDKFITLASEVGIWDYAPDEVAEKGRVGPGELLVVDTRKGKLWQSSEIDNDLKSRHPYREWMENNVRKLTPFSQLPEDQVGERSFDEDLLKTYQKQFAMSNEEVDQVLRVLGDMGQEAVGSMGDDTPMAVLSSKERLITDYFRQKFAQVTNPPIDPLREKHVMSLATSIGQEMNVFCETDGHAYRVTFDSPVLLYSDMQQLLELGDDHYRNTILDINYDPQQKDLKQAIDDLCDQAEQVVREGTVLVVLSDRALVKGKLPIPAAMAVGAVQTRLIDANLRCDANIVVETATARDPHQFAVLLGFGATAVYPYLAYEALGKLIDDKALEKDYRDVMQNYQHGINKGLYKIMSKMGISTIASYRCSQLFEAVGLSQKLVDLCFKGVTTRIEGASFEDFQQDLYNLSRKAWAKRKAIEHGGLLKYVHNGEYHAYNPDVVSTLQTAVKSGKSSDYHSFAKQVNQRPISMLRDLMALKKSGSPLPLEQIEPNTELFKRFDSAAMSIGALSPEAHEALAMAMNRLGGHSNSGEGGEDPRRFGTERNSRIKQIASGRFGVTPHYLTNADVLQIKVAQGAKPGEGGQLPGHKVTAEIAKLRYSVQGVTLISPPPHHDIYSIEDLAQLIFDLKQVNPNALVSVKLVSEPGVGTIATGVAKAYADLITISGYDGGTAASPLTSVKYAGSPWELGLAETQQALVANGLRHKIRLQVDGGLKTGLDVVKAAILGAESFGFGTAPMVAMGCKFLRICHLNNCATGVATQDETLRKEYFKGLPEMVMNYFIGLADEVRGLLAELGVEKLTDLIGRTDLLETVDGLTAKQTKLDLSNILEAPVSPEGLPLYWTQPNKPFDKAELNNKIIEDALQAVEKRQSASFFYNVINTDRSVGARLSGEIAQRYGNQGLAATPIKLYLDGTAGQSFGVWNAGGVELYLTGDANDYVGKGMAGGKVVIKPHQGTTFKCNEATIIGNTCLYGATGGKLFAAGKAGERFGVRNSGTIAVIEGAGDNACEYMTGGIVAILGATGVNFGAGMTGGFAYVLDENQDFQGRVNHESVEAISLSDLYIHQEHLRGLIAEHLEETGSSHAEDILANFDEWIPKFYLVKPQAADLRTLLGHQSRSAAELRVQAQ
SIO_010081: VA249_RS02180
subclass of: SO_0000673
so part of: VA249_RS02180
location: complement(458842..463305)
location: region:458842-463305:-1
so has part: feature:458842-463305:-1:exon

WP_221068656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458842-463305:-1:exon

VA249_RS02185
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02185
old locus tag: VYA_04220
so part of: sequence
location: complement(463758..465227)
location: region:463758-465227:-1
so has part: feature:463758-465227:-1:exon
subclass of: SO_0000010

position:463758:-1
position: 463758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465227:-1
position: 465227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463758-465227:-1:exon

VA249_RS02185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02185
old locus tag: VYA_04220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000513717.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate synthase subunit beta
translation: MGKPTGFLEHGRELPQKIDPAERIKNNKEFVLNKEFGDKINTQASRCMDCGVPFCHNGCPIGNIIPEFNDAVYRDSWEEAWNILSSTNNFPEFTGRVCPAPCESACVLGINQDPITICNIEKTIVETAYREGYAKPKTPRSRTGKTVAIIGSGPAGLAAAEQLNSAGHTVTVFERDEKVGGLLRFGIPDFKLGMDVIDRKINLMAEAGIEFKVNQHVGVDVNAQQLRQEFDVVLLTGGSTVPRDLPVPGRELKGVHFAMEFLGQNNRRANDMDLKGEELHAAGKHVVVIGGGDTGSDCVGTSNRHGAASITQVEIMPIPPEKRPANMPWPQYPMILRTSTSHEEGVDRHWNILTKEFIGNDKGEVTGLRLADIVWQDAKPGERPSFKEVEGSERVIPCDMAFLAMGFLHPEPTGVLAQLDVALDDRGNVATQGFATNQEGVFAAGDMRTGQSLVVRCINEGRECARAIDDYLMGSTNLEAKADSLMLSA
SIO_010081: VA249_RS02185
subclass of: SO_0000673
so part of: VA249_RS02185
location: complement(463758..465227)
location: region:463758-465227:-1
so has part: feature:463758-465227:-1:exon

WP_221068657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:463758-465227:-1:exon

VA249_RS02190
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: gltB
locus tag: VA249_RS02190
old locus tag: VYA_04230
so part of: sequence
location: complement(465227..469777)
location: region:465227-469777:-1
so has part: feature:465227-469777:-1:exon
subclass of: SO_0000010

position:469777:-1
position: 469777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465227-469777:-1:exon

VA249_RS02190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: gltB
locus tag: VA249_RS02190
old locus tag: VYA_04230
EC number: 1.4.1.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010445914.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO process: GO:0006537 - glutamate biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate synthase large subunit
translation: MVDREQNSQGLYTPELEHDACGIGFVAHLKNRKSHEVVTQALDMLARMEHRGGQGCDPCSGDGAGILLQKPHEFLLEEAVKLGIKLPSFEKYGVGVVLFPKDEYKREQCRDILERNAQRLDLEVIGYRVLPTDNSMIGADPLSTEPQFEHVFISGGPGITPEELERKLYVLRNYTVRVCLESVSNIGDDFYINSMSYKTLVYKGQLTTEQVPQYFLDLQNPTMVTALALVHSRFSTNTFPKWRLAQPFRYIAHNGEINTVRGNLNWMKAREAILESDLFTQAEIDMLLPICQEGSSDSSNFDMALELLVLSGRSLPHALMMMIPEAWQENKNMDPKRRAFYQYHANIMEPWDGPASVCFTDGVQVGATLDRNGLRPSRYTVTKDNFLVMASESGVVDIEPENVEFRGRLQPGRIFVADLEQGRIISDEEVKDTIATAQPYEKWVEENLLSLKKLPDASNQFSQPSPERLLHRQQAFGVSTEEVNEIIVPMANDAKEPLSAMGADWPLAVLSHQSQHLSNYFKQLFAQVTNPPIDPIRERMVMSLNTYLGKDQNLLTETPLHCQKVELESPVLANSELEKLRAIDNEHLQAKTLDIVFQANEDEGKLERALKRICQYAEDAVIDGYSIILLTDRAVNSNHAAIPAMLAVGAVHHHLIRKGLRAKCDIVVETGDARETHHFATLLGYGANAVNPYLVIETIIELQRTKKLDPEANPRDLFNNYRKAINGGLLKIFSKMGISTLQSYHGAQIFEALGIHKSVVDKYFTGTVSRIQGLTLDDIAKEVLIRHRIGYPQREIPIQMLDVGGVYQWKQRGEKHLFNPETISLLQESTRNKNYEQFKQYATAVDKQGDNAVTLRSQLEFIKNPAGSISIDEVEPIESIVKRFATGAMSFGSISYEAHSTLAVAMNRLGAKSNSGEGGEDPMRFERKENGDWERSAIKQVASGRFGVTSYYLTNAEELQIKMAQGAKPGEGGQLPGDKVDDWIGATRHSTPGVGLISPPPHHDIYSIEDLAQLIYDLKNANRAGRVNVKLVSEAGVGTIASGVAKAKADVVLIAGFDGGTGASPMSSIRHTGLPWELGLAETHQTLLKNGLRNRIVVQADGQMKTPRDLAVATLLGAEEWGVATAALVVEGCIMMRKCHKNTCPVGIATQNKTLRERFDGRVEDVVTFFQYMAQGLREIMAELGFRTIDEMVGQGQKLKVRQDVSHWKYKNLDLSPVLHVEQAREADGVFNQTQQNHNLEDVLDRKLIQAAIPALEKGEAVNAEFPIVNTDRSAGTMLSNEISKVYKDAGLPQPMNVKFKGSAGQSFGAFLAKGVKFEVEGDANDYWGKGLSGGTLVLYPDAKSSIVAEDNIVVGNVCFYGATSGESFIRGMAGERFCVRNSGAKVVVEGVGDHGCEYMTGGAAIILGSTGRNFAAGMSGGVAYVWDKSGDFESKLNSELVDLDPIEQEDRDLLLDMLTKHVQFTGSEVAQSFLDNFEASLASMVKVMPRDYKAVLQKRKAEAQSQGNETQAEAV
SIO_010081: VA249_RS02190
subclass of: SO_0000673
so part of: VA249_RS02190
location: complement(465227..469777)
location: region:465227-469777:-1
so has part: feature:465227-469777:-1:exon

WP_221068658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465227-469777:-1:exon

VA249_RS02195
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02195
old locus tag: VYA_04240
so part of: sequence
location: 470330..471274
location: region:470330-471274:1
so has part: feature:470330-471274:1:exon
subclass of: SO_0000010

position:470330:1
position: 470330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471274:1
position: 471274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470330-471274:1:exon

VA249_RS02195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02195
old locus tag: VYA_04240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009702700.1
GO function: GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR01212 family radical SAM protein
translation: MQLHELVNTLGQDLQRRYGEKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADEEVQIQSIHDQLKDRAGEIHRAKKYLAYFQAYTSTYAEVQVLKNMYEEALKAADIVGLCVGTRPDCVPDAVLDLLSGYVNQGYEIWLELGLQTANNNTLKRINRGHDFECYAEITKRARALGIKVCTHLIVGLPKETRDDNVDTLRKVLEVGTDGIKLHGLHIVEGSTMAKAWRAGKLEAPELEEYVAIASELIRMTPKEVVYHRVSSAARRPTLLSPLWCENRWLAMTEIGRALDREGAQGSLNGDAFLYTKPELKSE
SIO_010081: VA249_RS02195
subclass of: SO_0000673
so part of: VA249_RS02195
location: 470330..471274
location: region:470330-471274:1
so has part: feature:470330-471274:1:exon

WP_211915397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:470330-471274:1:exon

VA249_RS02200
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: arcB
locus tag: VA249_RS02200
old locus tag: VYA_04250
so part of: sequence
location: 471585..473945
location: region:471585-473945:1
so has part: feature:471585-473945:1:exon
subclass of: SO_0000010

position:471585:1
position: 471585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473945:1
position: 473945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471585-473945:1:exon

VA249_RS02200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: arcB
locus tag: VA249_RS02200
old locus tag: VYA_04250
EC number: 2.7.13.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005425383.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aerobic respiration two-component sensor histidine kinase ArcB
translation: MKPMKNLAQYYVDLLVKLGIVRFSILLALALVALAVVVQVGITLALQGSVGDIDLVRSVFFGLLITPWAVYFLSVVVDQLEESRQRLTKLVSKLKDMRSRDQELNFQLQQNIEKLNQEIEERIKAEEGREEAMQDLENEVFQRERTQVELAERTALLRSFIDASPDLIYYRNADGVFSGCNRAMEELTGKKEHQLVGLSPWDVYSKEVAEHIVDTDQKVFDDNQAITYEQWLDYPDGRKHYFELRKVPFYSKDGRHLGLVGFGRDITERKRHEESLEKASRDKTTFISTISHELRTPLNGIVGLSRMLLDSQLTEEQRKHMQTINVSAITLGNIFNDIIDMDKFDRRKLELLPAPLNFEDFVAEIESISALMAEQKGLRFDLERLSALPQVIEVDATRLRQVIWNLVSNAMKFTKEGGVVMTVSAEVDEDYATIIMEVEDTGIGIPEEELDKIFAMYYQVKSGKDNLHAVGTGIGLAVSQQLINMMDGEITVASEEGFGSTFTVSIHIPVVEQQAPAIDVKRESVHLNIFMVEDIELNVTVAKSLLESLGHSVTVAMTGKEALVNFVPEEYDLVLLDIQLPDMTGFDVANYYREHYDTLPPLVALTANVVKERREYLDNGMDDVISKPLAVQAIQTVIDKFLLQNDESKPMVTSISDEVEESVVVSSPMINTHLLDLDMLESYVDIVGVKPVYDSINMFEKMMPDYIDVLDSNMMAKDQEGIVSEAHKIKGAAGSIGLKHIQSVAQKAQSPDMPAWWENISDWVEEIKNEYQNDIQVLKSWLEQRK
SIO_010081: VA249_RS02200
subclass of: SO_0000673
so part of: VA249_RS02200
location: 471585..473945
location: region:471585-473945:1
so has part: feature:471585-473945:1:exon

WP_221068659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:471585-473945:1:exon

VA249_RS02205
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02205
old locus tag: VYA_04260
so part of: sequence
location: 473947..474396
location: region:473947-474396:1
so has part: feature:473947-474396:1:exon
subclass of: SO_0000010

position:473947:1
position: 473947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474396:1
position: 474396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473947-474396:1:exon

VA249_RS02205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02205
old locus tag: VYA_04260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010445922.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKFASVALAIALLGGCSTTPQVAWHEDSQTTINKVNVELKSNLWVNLMPTIGEVQEQNVHGALYLQANSELPANLTVDTLIIKQGDSEWEIDGDLLELRTHTENQWEVAFVWQIEADMEKRVDLALLLDDAGNKGWLVEKGIKIDKVY
SIO_010081: VA249_RS02205
subclass of: SO_0000673
so part of: VA249_RS02205
location: 473947..474396
location: region:473947-474396:1
so has part: feature:473947-474396:1:exon

WP_221068660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:473947-474396:1:exon

VA249_RS02210
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: arcA
locus tag: VA249_RS02210
old locus tag: VYA_04270
so part of: sequence
location: complement(474466..475182)
location: region:474466-475182:-1
so has part: feature:474466-475182:-1:exon
subclass of: SO_0000010

position:474466:-1
position: 474466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475182:-1
position: 475182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474466-475182:-1:exon

VA249_RS02210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: arcA
locus tag: VA249_RS02210
old locus tag: VYA_04270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005599232.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: two-component system response regulator ArcA
translation: MQTPQILIVEDEQVTRNTLKSIFEAEGYAVFEASDGEEMHRVLSENTINLVIMDINLPGKNGLLLARELREQANIALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRSMSTNAVQEEKRSVEKYVFNGWVLDINSRSLVSPAGESYKLPRSEFRALLHFCENPGKIQTRADLLKKMTGRELKPHDRTVDVTIRRIRKHFESVSGTPEIIATIHGEGYRFCGDLED
SIO_010081: VA249_RS02210
subclass of: SO_0000673
so part of: VA249_RS02210
location: complement(474466..475182)
location: region:474466-475182:-1
so has part: feature:474466-475182:-1:exon

WP_211915394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474466-475182:-1:exon

VA249_RS02215
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02215
old locus tag: VYA_04280
so part of: sequence
location: 475544..475951
location: region:475544-475951:1
so has part: feature:475544-475951:1:exon
subclass of: SO_0000010

position:475544:1
position: 475544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475951:1
position: 475951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475544-475951:1:exon

VA249_RS02215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02215
old locus tag: VYA_04280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005447853.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3293 domain-containing protein
translation: MIEKSNMKIDASLWHAYSDPFFHFYRKWNEVNYAVITAWNPYSNLRSKEENCINNHKLEEQLYHVDYVPVLVGDKFFEWSEESYATAVSVEMAVQLANHFQQNAIYYVMNNELYLIVCADPKVMHELGDIRPRLL
SIO_010081: VA249_RS02215
subclass of: SO_0000673
so part of: VA249_RS02215
location: 475544..475951
location: region:475544-475951:1
so has part: feature:475544-475951:1:exon

WP_221068661.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:475544-475951:1:exon

VA249_RS02220
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02220
old locus tag: VYA_04290
so part of: sequence
location: 476005..476487
location: region:476005-476487:1
so has part: feature:476005-476487:1:exon
subclass of: SO_0000010

position:476005:1
position: 476005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476487:1
position: 476487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476005-476487:1:exon

VA249_RS02220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02220
old locus tag: VYA_04290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010646559.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase
translation: MRDITPDICDQYEEQVTQLSLPLQNYGQRAAFFGEIVTVRCYHDNSMVREILSEDGTGKVLIVDGHGSCQRALLGDQLAILAIENGWEGIIVYGAVRDVAQMSQMDIGIQALGTCPFKTEKRGMGEVNVTLTMHNQIVQPKHYVYADWNGVLISKDELSF
SIO_010081: VA249_RS02220
subclass of: SO_0000673
so part of: VA249_RS02220
location: 476005..476487
location: region:476005-476487:1
so has part: feature:476005-476487:1:exon

WP_128811645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476005-476487:1:exon

VA249_RS02225
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02225
old locus tag: VYA_04300
so part of: sequence
location: complement(476484..476954)
location: region:476484-476954:-1
so has part: feature:476484-476954:-1:exon
subclass of: SO_0000010

position:476484:-1
position: 476484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476954:-1
position: 476954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476484-476954:-1:exon

VA249_RS02225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02225
old locus tag: VYA_04300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005528648.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease regulator
translation: MKRWIFLLLFVVPAISVATELPPLPGKTAPSPHKLFISSENYQTDSFDVWNIDGGYAYELFDSVDLYVGARVNNSPTQNQSGFLSGISYHFNDRVTVKSTVRSYKGEALEGLREEDRSLAAEVSSRVKITDNLDLHATLDYQDWQQGFEVGLGFRF
SIO_010081: VA249_RS02225
subclass of: SO_0000673
so part of: VA249_RS02225
location: complement(476484..476954)
location: region:476484-476954:-1
so has part: feature:476484-476954:-1:exon

WP_221068662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476484-476954:-1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 1074311
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00506
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Thr leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 477383..477502
location: region:477383-477502:1
so has part: feature:477383-477502:1:region

position:477383:1
position: 477383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477502:1
position: 477502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477383-477502:1:region

VA249_RS02230
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: thrA
locus tag: VA249_RS02230
old locus tag: VYA_04310
so part of: sequence
location: 477556..480015
location: region:477556-480015:1
so has part: feature:477556-480015:1:exon
subclass of: SO_0000010

position:477556:1
position: 477556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480015:1
position: 480015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477556-480015:1:exon

VA249_RS02230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: thrA
locus tag: VA249_RS02230
old locus tag: VYA_04310
EC number: 1.1.1.3
EC number: 2.7.2.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001264657.1
GO function: GO:0004072 - aspartate kinase activity [Evidence IEA]; GO:0004412 - homoserine dehydrogenase activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
GO process: GO:0008652 - amino acid biosynthetic process [Evidence IEA]; GO:0009067 - aspartate family amino acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional aspartate kinase/homoserine dehydrogenase I
translation: MRVLKFGGSSLADADRFLRAADIIANNAQQEEVAVVLSAPGKTTNKLVAVIEGALRNGEAELQINELEASFKALFADIQAVLPNIDGAAFDNQVKTSLSQLRQFVHGINLLGMCPNNVNARIISKGERVSIQLMKAVLEAKGQPAHLIDPVEYLYAKGDHLEAMVDVEVSTQNFRQNPLPQGHVNIMPGFTAGNAKGELVTLGRNGSDYSAAVLAACLRADCCEIWTDVDGVYNCDPRLVEDARLLKSLSYQEAMELSYFGASVLHPKTIAPIAQFHIPCLIKNSFNPQGAGTLIGQDTGEDNLAIKGITTLNDLTMVNVSGPGMKGMVGMASRVFGAMSSAGVSIVLITQSSSEYSISFCIEADDKAKAQQVLADAFELELKDGLLEPVEFIDNVSIVTLVGDGMRTSRGVASRFFSSLAEVNVNIVAIAQGSSERAISAVIPEDKISEAIKACHENLFNSKHFLDVFVVGIGGVGGELVDQIERQQAKLAEKGIVIRVCGLANSKGLLLDSEGLPLEHWRDRISAATEEFSLARLISLVQRNHIINPVLVDCTSSEDIANQYADFLAAGFHVVTPNKKANTASMAYYHQLRDVARSSRRKLMYETTVGAGLPVIENLQNLISAGDELERFSGILSGSLSYIFGKLDEGMSLSEATNIAKRNGFTEPDPRDDLSGMDVARKLLILAREAGMSLELEDVVVDQALPPGFDDSGSVEEFMERLPEADAYFKELSAKAAEDGKVLRYVGEIVEGKCTVSIAAVDENDPMFKIKDGENALAFYSRYYQPIPLVLRGYGAGTEVTAAGVFSDVMRTLGWKLGV
SIO_010081: VA249_RS02230
subclass of: SO_0000673
so part of: VA249_RS02230
location: 477556..480015
location: region:477556-480015:1
so has part: feature:477556-480015:1:exon

WP_221068663.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477556-480015:1:exon

VA249_RS02235
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: thrB
locus tag: VA249_RS02235
old locus tag: VYA_04320
so part of: sequence
location: 480036..480992
location: region:480036-480992:1
so has part: feature:480036-480992:1:exon
subclass of: SO_0000010

position:480036:1
position: 480036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480992:1
position: 480992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480036-480992:1:exon

VA249_RS02235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: thrB
locus tag: VA249_RS02235
old locus tag: VYA_04320
EC number: 2.7.1.39
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009848413.1
GO function: GO:0004413 - homoserine kinase activity [Evidence IEA]
GO process: GO:0009088 - threonine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: homoserine kinase
translation: MDVVVYAPASIGNVSVGFDVLGAAVSPVDGTLLGDRVLVKSGVESFTLKTAGDFVEKLPTEPKENIVYDCWVVFARELDKKGVELKPLEMTLEKNMPIGSGLGSSACSIVAALDALNRFHGQPLNETELLALMGEMEGKISGGIHYDNVAPCYLGGVQLMLEELGIISQEVPCFDDWYWVMAYPGIKVSTAEAREILPSQYRRQDIIAHGRHLAGFIHACHSGQPELAAKMIKDVIAEPYREKLLPGFANARQYAASAGALATGISGSGPTLFSICKEKDVAERVARWLEQNYVQNEEGFVHVCRLDKQGSKVTGSEL
SIO_010081: VA249_RS02235
subclass of: SO_0000673
so part of: VA249_RS02235
location: 480036..480992
location: region:480036-480992:1
so has part: feature:480036-480992:1:exon

WP_221069782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:480036-480992:1:exon

VA249_RS02240
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: thrC
locus tag: VA249_RS02240
old locus tag: VYA_04330
so part of: sequence
location: 480989..482269
location: region:480989-482269:1
so has part: feature:480989-482269:1:exon
subclass of: SO_0000010

position:480989:1
position: 480989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482269:1
position: 482269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480989-482269:1:exon

VA249_RS02240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: thrC
locus tag: VA249_RS02240
old locus tag: VYA_04330
EC number: 4.2.3.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009702444.1
GO function: GO:0004795 - threonine synthase activity [Evidence IEA]
GO process: GO:0009088 - threonine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: threonine synthase
translation: MKLYNIKENDEQVSFGQAVRQGLGRNQGLFFPSELPKFEDIDVLLAEDFVSRSTKILSALIGDELAEEQVNALVDAAFQFPAPINQVKDGVYALELFHGPTLAFKDFGGRFMAQSLAAVSDGGKITILTATSGDTGAAVAHAFYGMEDINVVILYPKGKISPLQEKLFCTLGKNIHTVAIDGDFDACQALVKQAFDDSALREEIGLNSANSINISRLMAQICYYFEAAAQMSKQERENLVVSVPSGNFGNLTAGLLAKALGLPIKRFIAATNANDTVPRYLETGQWAPKPTVATTSNAMDVSQPNNWPRIEELCRVKEWGLETLGKGAVSDEQSAQSVKDLYALGYLCEPHGAIAYRVLEEQLQDGETGLFLCTAHPAKFKEVVDDILQSDIDLPAPLAKHAVMELLSEDLNADFDALKQVLRRVQ
SIO_010081: VA249_RS02240
subclass of: SO_0000673
so part of: VA249_RS02240
location: 480989..482269
location: region:480989-482269:1
so has part: feature:480989-482269:1:exon

WP_221068664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:480989-482269:1:exon

VA249_RS02245
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: grcA
locus tag: VA249_RS02245
old locus tag: VYA_04340
so part of: sequence
location: complement(482392..482769)
location: region:482392-482769:-1
so has part: feature:482392-482769:-1:exon
subclass of: SO_0000010

position:482392:-1
position: 482392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482769:-1
position: 482769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482392-482769:-1:exon

VA249_RS02245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: grcA
locus tag: VA249_RS02245
old locus tag: VYA_04340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020330525.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: autonomous glycyl radical cofactor GrcA
translation: MIQGIQITKAANDELLNSIWLLDSEKNEARCVAAASTYEADQVIAISDLGEYESREVAIETAPRIEGGQHLNVNVLKRETLEDAVAHPENYPQLTIRVSGYAVRFNSLTAEQQRDVIARTFTESL
SIO_010081: VA249_RS02245
subclass of: SO_0000673
so part of: VA249_RS02245
location: complement(482392..482769)
location: region:482392-482769:-1
so has part: feature:482392-482769:-1:exon

WP_128811641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482392-482769:-1:exon

VA249_RS02250
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: nfo
locus tag: VA249_RS02250
old locus tag: VYA_04350
so part of: sequence
location: 483096..483986
location: region:483096-483986:1
so has part: feature:483096-483986:1:exon
subclass of: SO_0000010

position:483096:1
position: 483096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483986:1
position: 483986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483096-483986:1:exon

VA249_RS02250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: nfo
locus tag: VA249_RS02250
old locus tag: VYA_04350
EC number: 3.1.21.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017190099.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: deoxyribonuclease IV
translation: MTNIKNRLGNKFIGAHVSAAGGVDQAPLRAREIGANAFALFTKNQRQWVAKPLEEKTIRAFKANCKMLGFSAEHILPHDSYLINLGAPEEEKLNKSRAAFIDEMERCNQLGLTLLNFHPGSHLKKISEQECLATIAESINLAHRAVPNVIAVIENTAGQGTNLGWKFEHLAEIIDQVEDKERVGVCLDTCHTFTAGYDLRTKEDCEHTFAEFDRIVGMHYLRAMHLNDSKVEFASKVDRHHSLGKGEIGWSCFEYIAKDPRFDGIPLILETIDPDIWQQEISALRQYHLDEMVGES
SIO_010081: VA249_RS02250
subclass of: SO_0000673
so part of: VA249_RS02250
location: 483096..483986
location: region:483096-483986:1
so has part: feature:483096-483986:1:exon

WP_221068666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:483096-483986:1:exon

VA249_RS02255
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: ung
locus tag: VA249_RS02255
old locus tag: VYA_04360
so part of: sequence
location: 484317..484997
location: region:484317-484997:1
so has part: feature:484317-484997:1:exon
subclass of: SO_0000010

position:484317:1
position: 484317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484997:1
position: 484997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484317-484997:1:exon

VA249_RS02255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: ung
locus tag: VA249_RS02255
old locus tag: VYA_04360
EC number: 3.2.2.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020335913.1
GO function: GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO process: GO:0006284 - base-excision repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uracil-DNA glycosylase
translation: MNQLPTWHDVIGEEKQQSYLIDTLKFVEAERASGKAIFPPEEDVFNAFRFTEFGDVKVVILGQDPYHGPNQAHGLCFSVLPGIKTPPSLVNMYKELAQDIDGFQIPQHGFLQRWAEQGVLLLNTVLTVEQGKAHSHSKTGWETFTDRVIEAINQHQHGVVFLLWGAHAQKKGRFIDRSKHHVLEAPHPSPLSAHRGFFGCQHFSQTNQILEQQGLEPINWHLPVAV
SIO_010081: VA249_RS02255
subclass of: SO_0000673
so part of: VA249_RS02255
location: 484317..484997
location: region:484317-484997:1
so has part: feature:484317-484997:1:exon

WP_221068668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:484317-484997:1:exon

VA249_RS02260
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02260
old locus tag: VYA_04370
so part of: sequence
location: 485139..485690
location: region:485139-485690:1
so has part: feature:485139-485690:1:exon
subclass of: SO_0000010

position:485139:1
position: 485139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485690:1
position: 485690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485139-485690:1:exon

VA249_RS02260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02260
old locus tag: VYA_04370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012127021.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hemerythrin domain-containing protein
translation: MMIERIRREHGYMVRLLAILRHKLNEIKQEHAINYSLVSEIVDYLSNHSEKVHHPKEDILYHYFLEHYGQQKTIENLELEHKELAEKTKQFALVVEMILQDAVVPQEMFTQQLEDFITTQKQHLDLEERQILPLIEELFTSEDWLNVESQWQESEDDPVFGDTIADRYKQLAERVRQSNVEFV
SIO_010081: VA249_RS02260
subclass of: SO_0000673
so part of: VA249_RS02260
location: 485139..485690
location: region:485139-485690:1
so has part: feature:485139-485690:1:exon

WP_221068670.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485139-485690:1:exon

VA249_RS02265
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02265
old locus tag: VYA_04380
so part of: sequence
location: complement(485916..486101)
location: region:485916-486101:-1
so has part: feature:485916-486101:-1:exon
subclass of: SO_0000010

position:485916:-1
position: 485916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486101:-1
position: 486101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485916-486101:-1:exon

VA249_RS02265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02265
old locus tag: VYA_04380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005447876.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3545 family protein
translation: MEGFQLDDVFDLDTTSATRSRNKRMKRKWREIEEMNDRRNLLRELRELDVCNDITLEDIKL
SIO_010081: VA249_RS02265
subclass of: SO_0000673
so part of: VA249_RS02265
location: complement(485916..486101)
location: region:485916-486101:-1
so has part: feature:485916-486101:-1:exon

WP_211915388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485916-486101:-1:exon

VA249_RS02270
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02270
old locus tag: VYA_04390
so part of: sequence
location: 486820..488256
location: region:486820-488256:1
so has part: feature:486820-488256:1:exon
subclass of: SO_0000010

position:486820:1
position: 486820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488256:1
position: 488256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486820-488256:1:exon

VA249_RS02270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02270
old locus tag: VYA_04390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005447878.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:alanine symporter family protein
translation: MTDLINLMNDLLWGSILVYLLVGVGIYFTVRLGFIQFRHFGHMFSVLKNSRKADKAGISSFQALCTSLAARVGTGNMAGVAVALTAGGPGAIFWMWLIAMLGMATSFAESTLAQLYKTKDDDGNYRGGPAYYMEKGLGMRWMGVLFSVFLIIAFGLVFNAVQANSIANAMSNAFGWDDLYVGIAVVALSAVVIFGGIKRIAKVAELVVPVMALAYLALALFVMFANLDKLPAVLMLIFKSAFGLQEAAAGGLGYAIAQAMINGIKRGLFSNEAGMGSAPNAAASATPYPPHPASQGYVQMLGVFMDTIVICSATVAIILMSGEYVGQATEVTGIELTQRALSSQVGEWGSIFVAVAIFFFAFTSIIANYSYAETNLIFLEHNHKAGLGLFRVVVLGMVMFGALASLPVVWSLADVSMGLMAIVNLVAILLLSGIVIKLAKDYNRQLREGKVPTFDVNDFPELKSQLEDGIWHNTKKED
SIO_010081: VA249_RS02270
subclass of: SO_0000673
so part of: VA249_RS02270
location: 486820..488256
location: region:486820-488256:1
so has part: feature:486820-488256:1:exon

WP_128811635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:486820-488256:1:exon

VA249_RS02275
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02275
old locus tag: VYA_04400
so part of: sequence
location: 488443..489669
location: region:488443-489669:1
so has part: feature:488443-489669:1:exon
subclass of: SO_0000010

position:488443:1
position: 488443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489669:1
position: 489669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488443-489669:1:exon

VA249_RS02275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02275
old locus tag: VYA_04400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017088853.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MEHFYHLVATSRSIEIGDIELGDPPGSSDFTVSKPMHFDGVNLLFTSNGEPEFYANAFIMSRRIVEGVKDTEPTSYALLRFFRYLGKNNLNWNDENEELERYPIYLFRNYLDKQIAKGNMRRSVGASTLSVIRRFYVFCYRHGYVEKLPFEVHGHNKYGQMLTDITIKSPKQETELTPMNDLDIRHIRDNWHRAGISGEFRLLVATVINSGLRAIEVADIKPRHFKVPKGFKGKTYTDIKIGPSHGCYTKYSKNRTISMPVWLMEQVTQYCESERYKERKRLYFFNTGDEDAPVFITKEGNRFKEEGQRSNSIDTLWGRLRNAIKENSNPHFDHDFHDTRATYAANKLDLLLNIPDLSTTQALKLLKDELGHKDLSVTMRYLTHWEGNPTKNQVPELMMALLEEEHII
SIO_010081: VA249_RS02275
subclass of: SO_0000673
so part of: VA249_RS02275
location: 488443..489669
location: region:488443-489669:1
so has part: feature:488443-489669:1:exon

WP_176703889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:488443-489669:1:exon

VA249_RS02280
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02280
old locus tag: VYA_04410
so part of: sequence
location: 489666..491411
location: region:489666-491411:1
so has part: feature:489666-491411:1:exon
subclass of: SO_0000010

position:489666:1
position: 489666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491411:1
position: 491411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489666-491411:1:exon

VA249_RS02280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02280
old locus tag: VYA_04410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017088854.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTENFDSDKPDNVRTYRSIPTDEMQSDNPLSKIHQWKYIWVSGNGGNRTCDFKGWLKYSTKEHVSLLISKFEQSGWAEASKVRNFQHIDNILKHNFTSQSQKRKSKVEFSPESCVNYIQAVWLSQRTTGVGLHGKPIKAKTLGWLASNYNSILKKFGFGDIPKATRNLDTASASLDSNNYTKKELKRIARALLSDRKLLYKEYLDKTISEYKREIAFNRLICNAVFLYVYYTAVGQAEALNTFVVEDSWSIDKAGGNRISVKGLKTRGYKEESRTFAPRAVSKTFFEEHFELSKLNAVDLGLDKHYLFTRRNGNQPTPMNLNTYIASLMTRSVLLQTMKAANPDFSLTCERLKSSIKQYAEEKLGRQGAMESNRNTSESTWNNSDYSKNSKALAHRELAFGTATLFALGSNPTGGVTAAIATTKAQHCEVLSSEEVDALRASSSEPVDAIANGGVCKGEDVPQKREFQKSNLETGLLDDDDVKNTACGYVIKCFMCRNFAVVDEVHDIWRLLSFEFRLNEAVAAHKSLDHFIKNFSEVKSAIRDIKKRFKKRNLKAAEKYLERQGCHPLWDEDSIQDIFKG
SIO_010081: VA249_RS02280
subclass of: SO_0000673
so part of: VA249_RS02280
location: 489666..491411
location: region:489666-491411:1
so has part: feature:489666-491411:1:exon

WP_176703888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489666-491411:1:exon

VA249_RS02285
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02285
old locus tag: VYA_04420
so part of: sequence
location: 491414..493576
location: region:491414-493576:1
so has part: feature:491414-493576:1:exon
subclass of: SO_0000010

position:491414:1
position: 491414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493576:1
position: 493576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491414-493576:1:exon

VA249_RS02285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02285
old locus tag: VYA_04420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017088855.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MYSISHDHALFKKYALPIDEAYPMPTARTVVSVKRDGSPASYFEDDAWDFNDLFNTKNEKKSNYTLTFQAQKHNPKLLLEFKQRMYWLIWGGKDTLLSMEGKTFRKIEQVKDIQVHVDLLLRVFANTANNAFSYISNDIVFSQIKESLRGWSEKSCATRLNALSVLVQVNLHFPERARFHIPYQEGETARKVSKKYAAHGKGHFPTVIPVIYEQYLSRLIQDVESAYRDFLGGRDLESEVEAEYRSLQTEHDIEQEIETLYQELIVDIEVEEKAKNSGIFPQEVLDDYRDKAKDEVESIYRSKAHRGVIDAYKKDNVLLDVKAYAQLKGVTEKQAIDAFRMIEGACFGACSAFTGMRISELTQIEGDSYKEVDIDGVKLCTMRSWTDKLDKLSREDAWACAPICEKALLILTVLNDKYRSVSGDIHLSPRFSLKGEGKGWTGDTIHRQLKDAQLHTKNLRQIFYDYSLHIDIRYLPEEMDEIFNLLNPIVHEKLSPIKENERGELYWRFNTHSLRRTFAHFVVGHGLVSLASLKHQFKHIHLAMTAIYASHSEVLTLLGIQNPAKIKEKIQEQEIESHAEYLKDMIEHPEEQSGGFMKFMSGEPMVVGDARFNQLVEDTKGANKSTGFGTCFSGELCSMGHLFEPSKCVGRDCENLNVNKVEAENWVIRRERCIEKIEKMKEMGMFNRSSLATQLSDIRTAEKVMADHNIQFEKYRVEAL
SIO_010081: VA249_RS02285
subclass of: SO_0000673
so part of: VA249_RS02285
location: 491414..493576
location: region:491414-493576:1
so has part: feature:491414-493576:1:exon

WP_176703887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:491414-493576:1:exon

VA249_RS02290
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02290
old locus tag: VYA_04430
so part of: sequence
location: 493576..493983
location: region:493576-493983:1
so has part: feature:493576-493983:1:exon
subclass of: SO_0000010

position:493983:1
position: 493983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493576-493983:1:exon

VA249_RS02290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02290
old locus tag: VYA_04430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017074769.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATVATKLENAFKALLKEGKKISPYAVERRAGVSNGSLKNHIVLLEKVLAEKEKYATDPTNVGVVKARANKAKAKVSKDKYQEVLDKNEKLRAENEQFKGELKVMADKVAQMTWELHRYKTKTRKDSTNVHNLKA
SIO_010081: VA249_RS02290
subclass of: SO_0000673
so part of: VA249_RS02290
location: 493576..493983
location: region:493576-493983:1
so has part: feature:493576-493983:1:exon

WP_176703886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:493576-493983:1:exon

VA249_RS02295
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02295
old locus tag: VYA_04440
so part of: sequence
location: complement(494141..494989)
location: region:494141-494989:-1
so has part: feature:494141-494989:-1:exon
subclass of: SO_0000010

position:494141:-1
position: 494141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494989:-1
position: 494989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494141-494989:-1:exon

VA249_RS02295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02295
old locus tag: VYA_04440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004741153.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GMA family class A beta-lactamase GMA-1
translation: MKKSILLSSCLFISFLSTASTLNDSLYSIEQRTLGRIGVSVLDSTDQQWHYKGNERFPMMSTFKTLACAKMLQDSDRDILDISTMAPVKSDELIAWSPITKNMVGSSITIENACEATMKTSDNTAANIVLKHIGGPQGVTAFLRLIGDKVTQLDRFEPELNQAKADDLRDTTTPNAMNKTLYHILFEDVLAQNSKKQLKEWMQGNTVSDSLLRSVLPKGWSIADRSGAGANGSRGITAAIWTDEREPLIISIYLTQTNLSMPERNQVINEIGKAIFEEYAVK
SIO_010081: VA249_RS02295
subclass of: SO_0000673
so part of: VA249_RS02295
location: complement(494141..494989)
location: region:494141-494989:-1
so has part: feature:494141-494989:-1:exon

WP_012774820.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494141-494989:-1:exon

VA249_RS02300
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: yaaA
locus tag: VA249_RS02300
old locus tag: VYA_04450
so part of: sequence
location: 495545..496321
location: region:495545-496321:1
so has part: feature:495545-496321:1:exon
subclass of: SO_0000010

position:495545:1
position: 495545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496321:1
position: 496321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495545-496321:1:exon

VA249_RS02300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: yaaA
locus tag: VA249_RS02300
old locus tag: VYA_04450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012603257.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peroxide stress protein YaaA
translation: MLIVVSPAKTLDYESPLAVEKFTQPELVRYSKELIEVCRQLTPADVASLMKVSDKIADLNVGRFQEWSETFTTDNARQAILAFKGDVYTGLDAETLSEADFDYAQDHLRMLSGLYGLLKPLDLMQPYRLEMGTKLANEKGSNLYQFWGNVITDKLNEAIDAQGDNVLINLASNEYFKAVKPKNLDAQVITPIFKDCKNGQYKVISFYAKKARGMMARYIIENRIESVADLTKFDVAGYYFVEEESTPTELVFKREEQN
SIO_010081: VA249_RS02300
subclass of: SO_0000673
so part of: VA249_RS02300
location: 495545..496321
location: region:495545-496321:1
so has part: feature:495545-496321:1:exon

WP_221068673.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:495545-496321:1:exon

VA249_RS02305
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: srmB
locus tag: VA249_RS02305
old locus tag: VYA_04460
so part of: sequence
location: complement(496436..497659)
location: region:496436-497659:-1
so has part: feature:496436-497659:-1:exon
subclass of: SO_0000010

position:496436:-1
position: 496436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497659:-1
position: 497659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496436-497659:-1:exon

VA249_RS02305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: srmB
locus tag: VA249_RS02305
old locus tag: VYA_04460
EC number: 3.6.4.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014230842.1
GO function: GO:0003724 - RNA helicase activity [Evidence IEA]
GO process: GO:0000027 - ribosomal large subunit assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent RNA helicase SrmB
translation: MIRTFAELDLDPNLLDAIEEMGYERPTKIQAEAIPQALDGRDILASAPTGTGKTAAFVLPALQYLQDFPRRKPGPARILILTPTRELAMQIADQARALAKNTKLNIFTITGGVQYQEHADILATTQDIVVATPGRLREYIDAERFDCRAIEWLVLDEADRMLDMGFAPAVDRLSAECRWRKQTLLFSATLEGKGVEGFTADLLNEPAEIDAKSSLRERKKIAQWYHRADNAEHKLELLKHIITQQAERTIVFLKTRERLGELRAQLESAQIPCSWIQGEMPQDRRNNAIARFRDGTVNVLLATDVAARGIDLPDVSHVINYDMPRTADVYLHRIGRTARAGKKGNAISIVEAHDQPMLDRVARYVKEDIKERFVKEMRPKHKKPVFKKKKKKDDKKKVAKKKVAKKK
SIO_010081: VA249_RS02305
subclass of: SO_0000673
so part of: VA249_RS02305
location: complement(496436..497659)
location: region:496436-497659:-1
so has part: feature:496436-497659:-1:exon

WP_128811633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:496436-497659:-1:exon

VA249_RS02310
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02310
old locus tag: VYA_04470
so part of: sequence
location: complement(497767..498486)
location: region:497767-498486:-1
so has part: feature:497767-498486:-1:exon
subclass of: SO_0000010

position:497767:-1
position: 497767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498486:-1
position: 498486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497767-498486:-1:exon

VA249_RS02310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02310
old locus tag: VYA_04470
EC number: 2.1.1.223
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010646574.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA1(Val) (adenine(37)-N6)-methyltransferase
translation: MNTEPFKTKGFNFKQFSIRDGESGMPVSTDGVLLGAWAKCPPRSNILDIGTGTGLLALMCAQRFPDVVITALDIESTAVEAARNNFELSPWSNRLRVIHSDINQFEPTHLFHRIICNPPYFNSGEQSKQSQRATARHTNTLKHDELLKRCYTLLDKTGKASFVLPITEGEQFIAMAKADGWCLSRVCRVQPSQKKPVHRLLFELSKQACDTQESELVIHSNEGYSDDFTLLTREFYLKM
SIO_010081: VA249_RS02310
subclass of: SO_0000673
so part of: VA249_RS02310
location: complement(497767..498486)
location: region:497767-498486:-1
so has part: feature:497767-498486:-1:exon

WP_221068675.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:497767-498486:-1:exon

VA249_RS02315
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: brnQ
locus tag: VA249_RS02315
old locus tag: VYA_04480
so part of: sequence
location: 498914..500227
location: region:498914-500227:1
so has part: feature:498914-500227:1:exon
subclass of: SO_0000010

position:498914:1
position: 498914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500227:1
position: 500227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498914-500227:1:exon

VA249_RS02315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: brnQ
locus tag: VA249_RS02315
old locus tag: VYA_04480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010445961.1
GO function: GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
GO process: GO:0015803 - branched-chain amino acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid transport system II carrier protein
translation: MKQTLKLTDIIALGFMLFAFFLGAGNIIFPPLAGQLAGDHLMPAMFGFLLTAVGLPLITIVAIAVAGGSWDHLTQDLPKKAAVLMAALIFIIIGPAFAAPRTGLVAYEMAVKPFFVDAAQAHLTIFSILFFAVAMFFAWSQGKLIDVIGKVLTPALFIGLIILAVAVFADPQGEMIAAQGEYLTQPLTKGFLEGYNTMDTFGALMFGMLIVDALRSKGITEHAATTKYLIFAGCIAAAGLAFVYISLFYLGATSATVAAGADNGGIVLSQYVQALFGPYGQIVLSIIVLLACLTTAIGLISACADFFSSKTSVSYKQWVVINGVACAIVANVGLAQLIALSVPVLFALYPVAVALIALTFVRNRLPNPRTAYRMVLLVSLLFALIDAAKVAGVDVSAFNMLPLFSIGMGWLLPTTAAIVCSFFLAKSAQQELTEEAA
SIO_010081: VA249_RS02315
subclass of: SO_0000673
so part of: VA249_RS02315
location: 498914..500227
location: region:498914-500227:1
so has part: feature:498914-500227:1:exon

WP_128811631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:498914-500227:1:exon

VA249_RS02320
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: fldB
locus tag: VA249_RS02320
old locus tag: VYA_04490
so part of: sequence
location: complement(500371..500889)
location: region:500371-500889:-1
so has part: feature:500371-500889:-1:exon
subclass of: SO_0000010

position:500371:-1
position: 500371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500889:-1
position: 500889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500371-500889:-1:exon

VA249_RS02320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: fldB
locus tag: VA249_RS02320
old locus tag: VYA_04490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009848425.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flavodoxin FldB
translation: MKIGLFYGSTTCYTEMAAEKIRNIIGADLVDIHNVKETPLSLMADYDLLLIGISTWDFGEIQEDWSAIWQDIASTPLKGKVIALFGLGDQEGYGEWYLDAMGLLHDELKATGAHFIGYWPNEGYEFEASKALTEDGSQFVGLALDEDSQYELSDERIEKWCEQVLVEFHDTL
SIO_010081: VA249_RS02320
subclass of: SO_0000673
so part of: VA249_RS02320
location: complement(500371..500889)
location: region:500371-500889:-1
so has part: feature:500371-500889:-1:exon

WP_221068676.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:500371-500889:-1:exon

VA249_RS02325
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: xerD
locus tag: VA249_RS02325
old locus tag: VYA_04500
so part of: sequence
location: 501047..501964
location: region:501047-501964:1
so has part: feature:501047-501964:1:exon
subclass of: SO_0000010

position:501047:1
position: 501047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501964:1
position: 501964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501047-501964:1:exon

VA249_RS02325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: xerD
locus tag: VA249_RS02325
old locus tag: VYA_04500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005459400.1
GO function: GO:0009009 - site-specific recombinase activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific tyrosine recombinase XerD
translation: MTAQQTVNQQDFGLVEQFLDAMWMERGLSENTLASYRNDLMKLLTWMAKNNYRLDFISFSGLQEYQAYLVDLEYKQTSRARMLSAIRRLFQYIHREKVRSDDPSALLVSPKLPQRLPKDISEEQVDALLDAPDPNDPIELRDKAMLELLYATGLRVTELVSLTMENVSLRQGVVRVTGKGGKERLVPMGENAVDWIETFIKQGRSALLGDTTSDVVFPSKRARQMTRQTFWHRIKYYAVIAEIDTDLLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQIHSQHHPRA
SIO_010081: VA249_RS02325
subclass of: SO_0000673
so part of: VA249_RS02325
location: 501047..501964
location: region:501047-501964:1
so has part: feature:501047-501964:1:exon

WP_128811629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:501047-501964:1:exon

VA249_RS02330
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: dsbC
locus tag: VA249_RS02330
old locus tag: VYA_04510
so part of: sequence
location: 502030..502818
location: region:502030-502818:1
so has part: feature:502030-502818:1:exon
subclass of: SO_0000010

position:502030:1
position: 502030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502818:1
position: 502818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502030-502818:1:exon

VA249_RS02330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: dsbC
locus tag: VA249_RS02330
old locus tag: VYA_04510
EC number: 5.3.4.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014230847.1
GO component: GO:0042597 - periplasmic space [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional protein-disulfide isomerase/oxidoreductase DsbC
translation: MRVLRQLTLLTLPFFVTACGAEESQAKTETPAQQVAPAAKHNFDEAALIAKFSKLGVSILNIQPADIPGLLEIQTNGGVLFASNDGDYFIAGTLYAIDDNGGYKDVIAERQAPINAEKIAKLSDSAIEYKADNEKYVVTVFTDITCGYCVRLHSQMQGYNDLGITVRYMAYPRQGATGSVADQMATIWCAEDPKSAMHNAKVDRTFDNPAKDLKQCKETIKSHYNLGRELGISGTPAIFLPNGELVGGYVPPAELLKRLEQQ
SIO_010081: VA249_RS02330
subclass of: SO_0000673
so part of: VA249_RS02330
location: 502030..502818
location: region:502030-502818:1
so has part: feature:502030-502818:1:exon

WP_128811628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:502030-502818:1:exon

VA249_RS02335
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: recJ
locus tag: VA249_RS02335
old locus tag: VYA_04520
pseudo: true
so part of: sequence
location: 502865..504603
location: region:502865-504603:1
so has part: feature:502865-504603:1:exon
subclass of: SO_0000010

position:502865:1
position: 502865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504603:1
position: 504603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502865-504603:1:exon

VA249_RS02335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: recJ
locus tag: VA249_RS02335
old locus tag: VYA_04520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000570143.1
GO function: GO:0008409 - 5'-3' exonuclease activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: single-stranded-DNA-specific exonuclease RecJ
SIO_010081: VA249_RS02335
subclass of: SO_0000673
so part of: VA249_RS02335
location: 502865..504603
location: region:502865-504603:1
so has part: feature:502865-504603:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:502865-504603:1:exon

VA249_RS02340
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: prfB
locus tag: VA249_RS02340
old locus tag: VYA_04540
so part of: sequence
location: 504775..505873
location: region:504775-505873:1
so has part: feature:504775-505873:1:exon
subclass of: SO_0000010

position:504775:1
position: 504775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505873:1
position: 505873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504775-505873:1:exon

VA249_RS02340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: prfB
locus tag: VA249_RS02340
old locus tag: VYA_04540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010895430.1
ribosomal slippage: true
GO function: GO:0003747 - translation release factor activity [Evidence IEA]
GO process: GO:0006415 - translational termination [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor 2
translation: MFEINPIKNRLQDVSERTNVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETIDQLEQGVEDVEGLLELAVEEEDQETFDEIEPELAELEEKLGQLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKSEVIEVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIAIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDKFIEASLKSGL
SIO_010081: VA249_RS02340
subclass of: SO_0000673
so part of: VA249_RS02340
location: join(504775..504849,504851..505873)
location: region:504775-505873:1
so has part: feature:504775-504849:1:exon
so has part: feature:504851-505873:1:exon

WP_211920074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:504775-504849:1:exon

position:504849:1
position: 504849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:504851-505873:1:exon

position:504851:1
position: 504851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VA249_RS02345
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: lysS
locus tag: VA249_RS02345
old locus tag: VYA_04550
so part of: sequence
location: 505908..507440
location: region:505908-507440:1
so has part: feature:505908-507440:1:exon
subclass of: SO_0000010

position:505908:1
position: 505908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507440:1
position: 507440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505908-507440:1:exon

VA249_RS02345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: lysS
locus tag: VA249_RS02345
old locus tag: VYA_04550
EC number: 6.1.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005459407.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysine--tRNA ligase
translation: MTDAVQNETVQEASTQEENKLIAERRAKLDAIRKSCKANGHPNDFRRDALAGDLQKEFGEKTKEELEELNHVVAIAGRIMAKRGPFLVIQETSGRIQAYADKEVQKVLKDQYQGLDIGDIIGVKGALHKSGKGDLYVNMEEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAFVVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGFDRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMPYGEDTVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIAKSVHVEVEPFWTCGQLLEEIFGETAEPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFPAMRPQA
SIO_010081: VA249_RS02345
subclass of: SO_0000673
so part of: VA249_RS02345
location: 505908..507440
location: region:505908-507440:1
so has part: feature:505908-507440:1:exon

WP_221068678.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:505908-507440:1:exon

VA249_RS02350
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: vpsR
locus tag: VA249_RS02350
old locus tag: VYA_04560
so part of: sequence
location: 507688..509022
location: region:507688-509022:1
so has part: feature:507688-509022:1:exon
subclass of: SO_0000010

position:507688:1
position: 507688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509022:1
position: 509022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507688-509022:1:exon

VA249_RS02350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: vpsR
locus tag: VA249_RS02350
old locus tag: VYA_04560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005534149.1
note: Not actually a response regulator, but instead a cyclic-di-GMP-binding transcription factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-54 dependent transcriptional regulator
translation: MAGQFKMDSIPGSLVVVGGNYEPWLSVLEQVGWKCHQVGDLRKANTLLEDIGPCIGIVDLSHDEFSLNGLANLVSSHKHVRWLAFIRESQLGVDTICQFIVNFCIDFFTAPIPDAQLLSTIGHQLGMLKLEKKVWPSFGNSLDMGLIGDSIPMKRLRDQVKRIGPTDVSILIYGESGTGKEAVARAIHKVSSRSHKTFLSINCRALNEQRFQAEVFGIGADESIGPCLLEQADGGTVLLNDILTISKDQQMNLLRFLQEGTIETIDGIKSVDVRILAANSSDVEKALIDGDFNEELYHYINVLRINVPSLKERASDIALLACYYLQEFSKEYNSQAKSFSEDAIKSLTRYFWPGNVRELMNQVKRAVLMSDSVLIEEHHLDLPQRNEVKRSLKSIREKSERDALMVVLESHSGQVSNAAKELGVSRATMYRLLNKHNLISEHTV
SIO_010081: VA249_RS02350
subclass of: SO_0000673
so part of: VA249_RS02350
location: 507688..509022
location: region:507688-509022:1
so has part: feature:507688-509022:1:exon

WP_211920073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507688-509022:1:exon

VA249_RS02355
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02355
old locus tag: VYA_04570
so part of: sequence
location: 509768..510019
location: region:509768-510019:1
so has part: feature:509768-510019:1:exon
subclass of: SO_0000010

position:509768:1
position: 509768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510019:1
position: 510019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509768-510019:1:exon

VA249_RS02355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02355
old locus tag: VYA_04570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004735015.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1127 domain-containing protein
translation: MRHSIYLKLATLLVKADLIREEKQWQRAVRRSSKNIPWLNAHLLRDMGLDSEGRAILTRTPDEVQVDRRVRHLRRVLTSRILT
SIO_010081: VA249_RS02355
subclass of: SO_0000673
so part of: VA249_RS02355
location: 509768..510019
location: region:509768-510019:1
so has part: feature:509768-510019:1:exon

WP_128811623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:509768-510019:1:exon

VA249_RS02360
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02360
old locus tag: VYA_04580
so part of: sequence
location: complement(510112..511146)
location: region:510112-511146:-1
so has part: feature:510112-511146:-1:exon
subclass of: SO_0000010

position:510112:-1
position: 510112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511146:-1
position: 511146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510112-511146:-1:exon

VA249_RS02360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02360
old locus tag: VYA_04580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020430547.1
GO function: GO:0047834 - D-threo-aldose 1-dehydrogenase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADP(H)-dependent aldo-keto reductase
translation: MQYTKLPHSSLEISKICLGTMTFGEQNTEHEAFQQIDFALDHGVNFIDTAEMYPVPPKAETQGLTEQYIGNWLAKSGKREKVILATKIAGPRNVPYIRENMSLNRRHIHTAINDSLKRLQTDYVDLYQLHWPQRQTNCFGQLNYPYPESQEDVTLIETLEALTELVKAGKVRYIGVSNDTPWGVMSLLRLAEKHNLPRIISIQNPYNLLNRSFEIGLSEISHYEGVQLLAYSPLAFGCLSGKYLHGAKPVGARCTKWERFARYFTPQGIKATEAYVNLAKEYDLDPAQMALAFVNQRPFVASNIIGATNLKQLKANIDSININLSDELLIKIQSISTIYSNPCP
SIO_010081: VA249_RS02360
subclass of: SO_0000673
so part of: VA249_RS02360
location: complement(510112..511146)
location: region:510112-511146:-1
so has part: feature:510112-511146:-1:exon

WP_221068679.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510112-511146:-1:exon

VA249_RS02365
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02365
old locus tag: VYA_04590
so part of: sequence
location: 511399..511710
location: region:511399-511710:1
so has part: feature:511399-511710:1:exon
subclass of: SO_0000010

position:511399:1
position: 511399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511710:1
position: 511710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511399-511710:1:exon

VA249_RS02365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02365
old locus tag: VYA_04590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017056116.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6482 family protein
translation: MQIHQLDMWVHGHHKDSYKTPKVFVIGCSDVSDYLLAVEYKHQLEPIKDGEDPMHFGSLELVKEQLLRLGIDKAYLRLRNAYEEFGNEGAASYCDIELSLVTH
SIO_010081: VA249_RS02365
subclass of: SO_0000673
so part of: VA249_RS02365
location: 511399..511710
location: region:511399-511710:1
so has part: feature:511399-511710:1:exon

WP_128811621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511399-511710:1:exon

VA249_RS02370
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: mutH
locus tag: VA249_RS02370
old locus tag: VYA_04600
so part of: sequence
location: complement(511770..512450)
location: region:511770-512450:-1
so has part: feature:511770-512450:-1:exon
subclass of: SO_0000010

position:511770:-1
position: 511770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512450:-1
position: 512450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511770-512450:-1:exon

VA249_RS02370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: mutH
locus tag: VA249_RS02370
old locus tag: VYA_04600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015296255.1
GO function: GO:0004519 - endonuclease activity [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA mismatch repair endonuclease MutH
translation: MKPEPQSEAELMERAHDIAGLSFAELAEEAGMKVPDNLKRDKGWVGQLLEWHLGAVAGSKPQQDFTKLGIELKSIPISYTGKPLETTFVCVAPLTGVHGLTWETSHVRNKLSRVLWVPVEGEREIPLSERRVGSPLIWSPNQEEEHILRSDWEELMELIVLGKFDQISARHGEALHLRPKAANAKALTEAYSANGKPIKTLPRGFYLRTQFTEQILLRHYISVQQT
SIO_010081: VA249_RS02370
subclass of: SO_0000673
so part of: VA249_RS02370
location: complement(511770..512450)
location: region:511770-512450:-1
so has part: feature:511770-512450:-1:exon

WP_211920070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511770-512450:-1:exon

VA249_RS02375
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rppH
locus tag: VA249_RS02375
old locus tag: VYA_04610
so part of: sequence
location: 513069..513587
location: region:513069-513587:1
so has part: feature:513069-513587:1:exon
subclass of: SO_0000010

position:513069:1
position: 513069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513587:1
position: 513587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513069-513587:1:exon

VA249_RS02375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rppH
locus tag: VA249_RS02375
old locus tag: VYA_04610
EC number: 3.6.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009844148.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA pyrophosphohydrolase
translation: MIDGDGYRLNVGIVICNNHGQVFWAKRYGQHSWQFPQGGIDEGETPEQAMFRELYEEVGLTKKDVKIIATSRHWLRYKLPKRLVRWDSKPVCIGQKQKWFLLRLESDESQINMQRGKSPEFDGWRWVSYWYPVRQVVSFKRDVYRRAMKEFASLAMPFRERKTKGKRKKLRR
SIO_010081: VA249_RS02375
subclass of: SO_0000673
so part of: VA249_RS02375
location: 513069..513587
location: region:513069-513587:1
so has part: feature:513069-513587:1:exon

WP_128811618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513069-513587:1:exon

VA249_RS02380
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: ptsP
locus tag: VA249_RS02380
old locus tag: VYA_04620
so part of: sequence
location: 513597..515843
location: region:513597-515843:1
so has part: feature:513597-515843:1:exon
subclass of: SO_0000010

position:513597:1
position: 513597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515843:1
position: 515843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513597-515843:1:exon

VA249_RS02380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: ptsP
locus tag: VA249_RS02380
old locus tag: VYA_04620
EC number: 2.7.3.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000952229.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoenolpyruvate--protein phosphotransferase
translation: MLSQLRDIVEKVSRVDDVHLALDILVKETCSALCTECCTIYLANEEMQRLELMATQGLIFEGKSIHIDFNEGLVGLVKRSAEPLNLAEAFTHPDFKFFPQLGEQAYHSFLGTPIIYRKKVLGVLVIQQKTPRLFSEMEESFLVTLSAQLAVLIAHAQNLGHWQLASKPRVIKGLPASTGVAIGEFWFDNTQPCLHDVFPASTLDKEREHELLAVAVERALNDFRRMRKKLDSEINKDALAIFDLFTHLLNDPMLRGDLKKQIEKGDRADWALRQVVETYSNRFARMSDVYLRERAQDIKELGQRLLYFLHNSEQEHSAIDRPVILVANELTATLLASIPKQYLLAVVSLEGAANSHAAILSRALGVPAIMGAPLNTEAVVGKLGIVDGYTGEVFLEPNRQLLREYRSLVNEESELFAMVNKDLALPAVTQDRRHIEILLNAGLSADSNIAINQGVDGVGLYRTEIAFLLQHHFPSEDEQYHQYQAILNSYPDQRVVMRTLDIGGDKPLPYLPIEEDNPFLGWRGIRFTLDHPDIFLIQLRAMLRASADSGNLSILLPMISGIKELDDAVTLINQAYSEVVLLDARIQAPKVGVMIEVPSMVYLLPSIAHRVDFVSVGTNDLTQYLLAVDRNNSRVADVYESMHPAVLLALKQIHDVCEQYQVPVCICGELAGDPFGALLLLGLGYRSLSMNTSNVAKVKYLIRHSQQKELEKLVEQALSCSYGEEIHQMMHDFFVQQGFAGFIRAGKK
SIO_010081: VA249_RS02380
subclass of: SO_0000673
so part of: VA249_RS02380
location: 513597..515843
location: region:513597-515843:1
so has part: feature:513597-515843:1:exon

WP_221068681.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513597-515843:1:exon

VA249_RS02385
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02385
old locus tag: VYA_04630
so part of: sequence
location: 515850..516641
location: region:515850-516641:1
so has part: feature:515850-516641:1:exon
subclass of: SO_0000010

position:515850:1
position: 515850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516641:1
position: 516641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515850-516641:1:exon

VA249_RS02385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02385
old locus tag: VYA_04630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009844150.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfite exporter TauE/SafE family protein
translation: MTISLFLLLLALGAFVGVMAGLLGIGGGLIVVPALLYLLPFAGIPTEMSMHIALATSLASIIVTSGSSAMNHLKLGNVDMFVVKWLMPGVIIGGFVGANVAEFIPTHYLPKVFGVIVLFLALQMFRSIRSKSTKPMPSSPVTMMYGTGIGIVSSLAGIGGGSLSVPFLNKHGIEMRKAVGSSSVCGCVIAISGMIGFILHGYNVENLPEYSIGYVYLPALVAIAMTSMLTTKVGAKLATTLPTAVLKKIFALFLMFVAASMLL
SIO_010081: VA249_RS02385
subclass of: SO_0000673
so part of: VA249_RS02385
location: 515850..516641
location: region:515850-516641:1
so has part: feature:515850-516641:1:exon

WP_221068683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515850-516641:1:exon

VA249_RS02390
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: lgt
locus tag: VA249_RS02390
old locus tag: VYA_04640
so part of: sequence
location: 516754..517575
location: region:516754-517575:1
so has part: feature:516754-517575:1:exon
subclass of: SO_0000010

position:516754:1
position: 516754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517575:1
position: 517575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516754-517575:1:exon

VA249_RS02390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: lgt
locus tag: VA249_RS02390
old locus tag: VYA_04640
EC number: 2.5.1.145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016767730.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO process: GO:0009249 - protein lipoylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prolipoprotein diacylglyceryl transferase
translation: MSQGYFEFPNIDPVLVSIGPVSVRWYGLMYLIGFMFALWLANRRADKPGSGWTREQVSDLLFAGFLGVVIGGRVGYVIFYNFDLFLADPLYLFKVWTGGMSFHGGLLGVITAMFWYAHKNARTFFGVADFVAPLVPFGLGMGRLGNFMNSELWGRVTDVPWAIIFPNGGPLPRHPSQLYEMFLEGIVLFFILNWFIKKPRPLGAVSGLFLAGYGTFRFLIEFVREPDAQLGLFGGYISMGQILSSPMIILGILMMVWAYKRGLYQDKAKVETK
SIO_010081: VA249_RS02390
subclass of: SO_0000673
so part of: VA249_RS02390
location: 516754..517575
location: region:516754-517575:1
so has part: feature:516754-517575:1:exon

WP_221068685.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:516754-517575:1:exon

VA249_RS02395
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02395
old locus tag: VYA_04650
so part of: sequence
location: 517585..518436
location: region:517585-518436:1
so has part: feature:517585-518436:1:exon
subclass of: SO_0000010

position:517585:1
position: 517585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518436:1
position: 518436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517585-518436:1:exon

VA249_RS02395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02395
old locus tag: VYA_04650
EC number: 2.1.1.45
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006075639.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thymidylate synthase
translation: MKQYLDLCQRIVDQGIWVENDRTGKRCLTVVNADLTYDVANNQFPLVTTRKSFWKAAVAELLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGEDDMGRVYGVQGRSWAKPDGGHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQRSCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAYHKIVNAHIYEDQLAPMRDIQLKREPLKAATFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIQYPFSV
SIO_010081: VA249_RS02395
subclass of: SO_0000673
so part of: VA249_RS02395
location: 517585..518436
location: region:517585-518436:1
so has part: feature:517585-518436:1:exon

WP_221068687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:517585-518436:1:exon

VA249_RS02400
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02400
old locus tag: VYA_04660
so part of: sequence
location: complement(518659..519804)
location: region:518659-519804:-1
so has part: feature:518659-519804:-1:exon
subclass of: SO_0000010

position:518659:-1
position: 518659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519804:-1
position: 519804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518659-519804:-1:exon

VA249_RS02400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02400
old locus tag: VYA_04660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006711492.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015114 - phosphate ion transmembrane transporter activity [Evidence IEA]; GO:0005436 - sodium:phosphate symporter activity [Evidence IEA]
GO process: GO:0035435 - phosphate ion transmembrane transport [Evidence IEA]; GO:0044341 - sodium-dependent phosphate transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Na/Pi symporter
translation: MNQATSTAAPISSTTRWLRWANLAFMLYLLLLAVSMVGSGFKWATGDQAKVLFEFASHPIAGLMIGLVATALIQSSSTVTSIIVGLVAGGLPVETAIPMVMGANIGTTVTNTLVSLGHVRCKDEFKRAFASATIHDFFNLLAVAIFLPLEMMFGILEKVSHWLVSPLLKTGDMSMGGFDFIKPITKPVVSAIKEPLSTFGDTMGGVALIALGIGTIFVAITVMGKLMKSLMVGRARDILKNAIGRGPIHGIVSGSVVTVLVQSSSTTTSLMVPLVGSGVLKVRDIYPFTLGANIGTCITALLAATAVSGEFAVFALQIALVHLTFNILATLLIFGIPFLREIPVKCAELISEMAVKNKAVVAAYLLTIFLVLPGAILALTV
SIO_010081: VA249_RS02400
subclass of: SO_0000673
so part of: VA249_RS02400
location: complement(518659..519804)
location: region:518659-519804:-1
so has part: feature:518659-519804:-1:exon

WP_221069784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518659-519804:-1:exon

VA249_RS02405
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: nhaR
locus tag: VA249_RS02405
old locus tag: VYA_04680
so part of: sequence
location: 520192..521082
location: region:520192-521082:1
so has part: feature:520192-521082:1:exon
subclass of: SO_0000010

position:520192:1
position: 520192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521082:1
position: 521082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520192-521082:1:exon

VA249_RS02405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: nhaR
locus tag: VA249_RS02405
old locus tag: VYA_04680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017629799.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional activator NhaR
translation: MSHLNYNHLYYFWMVCKQGSVTKAAEALFLTPQTVTGQIKAFEERMKGKLTKRNGRSVEPTELGQLVFKYADRMFGLSYEMLDIVNYSQHSNILFEVGVADALSKRLVSKVLMTTVPEDNSIHLRCYESTHELLLERLSQHKLDMILSDCPVDSTQSPGLYSKKLGECSMSFFASSDVPDVKFPEVLEKKKLLIPGSRTAMGRKVLQWFDRQGLQPDVLGEFDDVALMKAFARYRDDVIFLAPTVYMSEIEDDRSLQLLGHVEDLKEEYYVIFAERMIQHPAVKNVCDADFGQMFE
SIO_010081: VA249_RS02405
subclass of: SO_0000673
so part of: VA249_RS02405
location: 520192..521082
location: region:520192-521082:1
so has part: feature:520192-521082:1:exon

WP_128811612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:520192-521082:1:exon

VA249_RS02410
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02410
old locus tag: VYA_04690
so part of: sequence
location: 521194..521493
location: region:521194-521493:1
so has part: feature:521194-521493:1:exon
subclass of: SO_0000010

position:521194:1
position: 521194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521493:1
position: 521493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521194-521493:1:exon

VA249_RS02410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02410
old locus tag: VYA_04690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005447923.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloregulator ArsR/SmtB family transcription factor
translation: MNLQDMEQNSEKAVVLLKAMANERRLQILCMLHNQELSVGELCTKLALSQSALSQHLAWLRRDELVATRKEAQTVYYTLKSDEVKALIKTLHALYCTES
SIO_010081: VA249_RS02410
subclass of: SO_0000673
so part of: VA249_RS02410
location: 521194..521493
location: region:521194-521493:1
so has part: feature:521194-521493:1:exon

WP_221068688.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:521194-521493:1:exon

VA249_RS02415
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rpsT
locus tag: VA249_RS02415
old locus tag: VYA_04700
so part of: sequence
location: complement(521655..521915)
location: region:521655-521915:-1
so has part: feature:521655-521915:-1:exon
subclass of: SO_0000010

position:521655:-1
position: 521655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521915:-1
position: 521915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521655-521915:-1:exon

VA249_RS02415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rpsT
locus tag: VA249_RS02415
old locus tag: VYA_04700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005447926.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S20
translation: MANSKSAKKRAIQAEKRRQHNASRRSMMRTYMKKTVAAIEAGDKEAATAAFAVVTPILDRMATKGLVHKNKAARHKSRFAAQIKAL
SIO_010081: VA249_RS02415
subclass of: SO_0000673
so part of: VA249_RS02415
location: complement(521655..521915)
location: region:521655-521915:-1
so has part: feature:521655-521915:-1:exon

WP_128811610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:521655-521915:-1:exon

VA249_RS02420
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: murJ
locus tag: VA249_RS02420
old locus tag: VYA_04710
so part of: sequence
location: 522209..523771
location: region:522209-523771:1
so has part: feature:522209-523771:1:exon
subclass of: SO_0000010

position:522209:1
position: 522209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523771:1
position: 523771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522209-523771:1:exon

VA249_RS02420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: murJ
locus tag: VA249_RS02420
old locus tag: VYA_04710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005533259.1
GO process: GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: murein biosynthesis integral membrane protein MurJ
translation: MSKRLLKSGMIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANKIPNFLRRLFAEGAFSQAFVPVLTESHAQGDMDKTRELIARAAGTLGVIVSIVTLFGVLGSGVVTALFGFGWFLDWMNGGPSAEKFELASVMLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNVMIIFAAWFISPQMSQPEIGLAIGVFLGGLVQFLFQIPFLIKAGVMVKPKWGWRDPGVVKIRTLMIPALFGVSVSQINLLFDTFIASFLQTGSISWLYYSDRLLEFPLGLFGIAIATVILPALSRKHVDAHSEGFSDTMDWGVRMVTLLGIPAMLGLMVLAKPMLMVLFMRGEFSPQDVHQASLSLLAYASGLLNFMLIKVLAPGYYSRQDTKTPVKYGIVAMITNMVFNAIFAYFYGYVGLAIATALSAFVNMALLYRGLHIAGVYQVSKRTVLFIARLVIAGGAMVAAILWQLEDMSVWLNWSFAHRSGVLGMLVALGAAVYLAVVFLLGVRFKDLKAGTE
SIO_010081: VA249_RS02420
subclass of: SO_0000673
so part of: VA249_RS02420
location: 522209..523771
location: region:522209-523771:1
so has part: feature:522209-523771:1:exon

WP_221068690.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522209-523771:1:exon

VA249_RS02425
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: ribF
locus tag: VA249_RS02425
old locus tag: VYA_04720
so part of: sequence
location: 523841..524776
location: region:523841-524776:1
so has part: feature:523841-524776:1:exon
subclass of: SO_0000010

position:523841:1
position: 523841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524776:1
position: 524776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523841-524776:1:exon

VA249_RS02425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: ribF
locus tag: VA249_RS02425
old locus tag: VYA_04720
EC number: 2.7.1.26
EC number: 2.7.7.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012127045.1
GO function: GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional riboflavin kinase/FAD synthetase
translation: MELIRGIHNIKTQHHGCVLTIGNFDGVHRGHQQVLQQVSDQAKKLALPSVVMTFEPQPMELFAREKAPARLTRLRDKFVQLSKLGIDRLLCVNFNRHFADLTAEEFIRDLLVVRLGVKFLVVGDDFCFGKGRTGNFAMLQEAGEKYGFKVVSTQSFCLQQLRVSSTAIRKALACDDLHSAQEMLGRDYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQALGLGDKPIGGVANIGQRPTVNGVRQQLEVHLFDFHANLYGKQLEVKLLHKLRDEQKFESFEALKQQIELDAEAARVWLRQLKR
SIO_010081: VA249_RS02425
subclass of: SO_0000673
so part of: VA249_RS02425
location: 523841..524776
location: region:523841-524776:1
so has part: feature:523841-524776:1:exon

WP_221068702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:523841-524776:1:exon

VA249_RS02430
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: ileS
locus tag: VA249_RS02430
old locus tag: VYA_04730
so part of: sequence
location: 524841..527687
location: region:524841-527687:1
so has part: feature:524841-527687:1:exon
subclass of: SO_0000010

position:524841:1
position: 524841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527687:1
position: 527687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524841-527687:1:exon

VA249_RS02430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: ileS
locus tag: VA249_RS02430
old locus tag: VYA_04730
EC number: 6.1.1.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012842132.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isoleucine--tRNA ligase
translation: MSEYKDTLNLPETGFPMRGNLANREPEMLERWYKEDLYGEIRKAKKGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQKVTAAEFREKCREYAAGQVEGQKESFKRLGIMGEWDKPYRTMDFATEANIIRALGKIASKGHLLKGFKPVHWCTDCGSALAEAEVEYKDKVSPSIDVRFKAADEAALLSKFELTEGHEGQGDVSIVIWTTTPWTLPANRAVCLRDDLEYVLIQTEGDNAERIIVAAELAKDVMDRAGIEHFHNLGFAKGADLELCQFQHPFYDFTVPAILGDHVTTDSGTGVVHTAPGHGQEDFAVGNKYNLEVANPVGSNGVYLPDTELFAGQHVFKANDAVVEVLKEKGALLHHHAYEHSYPHCWRHKTPIIFRATPQWFVSMDQAGLRAKALESIKSVEWMPEWGQSRIEGMIEGRPEWCISRQRTWGVPIALFVHKETAELHPNTLELIEKVAQVVEEKGIQAWWDIDSVELLGDEAEQYEKVLDTLDVWFDSGVTHFSVVDAREEYNGNSADLYLEGSDQHRGWFQSSLISSIAMKDEAPYKQVLTHGFVVDGHGRKMSKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTARFFLANLSGFNPATDIVPAEEMVALDRWAVGRALAAQEEIVKAYGEYNIHAVTQRLMQFCSIEMGSFYLDVIKDRQYTAKRGGHAQRSCQTALYYIVEALVRWMAPIMSFTADEIWNEMPALLPSGENRDKFVFTGEWFDGLFGLAEGEELNNEFWTEIQAVRGAVNKLLEDARKEKIIGGALQAEVTLFADDALAAKINKLEDELRFVLLTSGAKVKSLSEKSDAAQATDIEGLFVEVAAAEGEKCDRCWHHTADVGTIEGHEKVCGRCVSNVDGEGEQRKFA
SIO_010081: VA249_RS02430
subclass of: SO_0000673
so part of: VA249_RS02430
location: 524841..527687
location: region:524841-527687:1
so has part: feature:524841-527687:1:exon

WP_221068704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524841-527687:1:exon

VA249_RS02435
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: lspA
locus tag: VA249_RS02435
old locus tag: VYA_04740
so part of: sequence
location: 527761..528267
location: region:527761-528267:1
so has part: feature:527761-528267:1:exon
subclass of: SO_0000010

position:527761:1
position: 527761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528267:1
position: 528267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527761-528267:1:exon

VA249_RS02435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: lspA
locus tag: VA249_RS02435
old locus tag: VYA_04740
EC number: 3.4.23.36
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005397302.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptidase II
translation: MSEKALTLKQSGVRWLWLAILIFIADISIKLVVMDNMGYGWANRIEVLPFFNLLYVHNYGAAFSFLSDQAGWQRWLFTGIAFVVTGLLTYWMSKLPAKEKWNNIAYAMIIGGAVGNVFDRVVHGFVVDYLDFFWGSYHWPAFNLADMAIVIGAAMIILDGFRKKDAES
SIO_010081: VA249_RS02435
subclass of: SO_0000673
so part of: VA249_RS02435
location: 527761..528267
location: region:527761-528267:1
so has part: feature:527761-528267:1:exon

WP_128811606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:527761-528267:1:exon

VA249_RS02440
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: fkpB
locus tag: VA249_RS02440
old locus tag: VYA_04750
so part of: sequence
location: 528399..528830
location: region:528399-528830:1
so has part: feature:528399-528830:1:exon
subclass of: SO_0000010

position:528399:1
position: 528399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528830:1
position: 528830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528399-528830:1:exon

VA249_RS02440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: fkpB
locus tag: VA249_RS02440
old locus tag: VYA_04750
EC number: 5.2.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005533267.1
GO function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FKBP-type peptidyl-prolyl cis-trans isomerase
translation: MTIIKSDSAVTLHFTIKMKDGSVADSTHNMGKPAKFAMGDGSLSENFEQCLLGLKSGEQKAIELKAEDAFGMPNPDHIHHMERTKFVGDAEVEVGTIMAFSGPDGMEIPGIITEIAGDSVTVDFNHPLAGQDVTFEVEILSVE
SIO_010081: VA249_RS02440
subclass of: SO_0000673
so part of: VA249_RS02440
location: 528399..528830
location: region:528399-528830:1
so has part: feature:528399-528830:1:exon

WP_128811605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528399-528830:1:exon

VA249_RS02445
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
alternative label: lytB
gene: ispH
locus tag: VA249_RS02445
old locus tag: VYA_04760
gene synonym: lytB
so part of: sequence
location: 528855..529820
location: region:528855-529820:1
so has part: feature:528855-529820:1:exon
subclass of: SO_0000010

position:528855:1
position: 528855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529820:1
position: 529820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528855-529820:1:exon

VA249_RS02445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
alternative label: lytB
gene: ispH
locus tag: VA249_RS02445
old locus tag: VYA_04760
gene synonym: lytB
EC number: 1.17.7.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020335931.1
GO function: GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0050992 - dimethylallyl diphosphate biosynthetic process [Evidence IEA]; GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
translation: MSNEMKILLANPRGFCAGVDRAISIVERALEMYQPPIYVRHEVVHNRFVVEGLKQRGAIFVEELSEVPDNNIVIFSAHGVSQAVRQEAKSRDLTVFDATCPLVTKVHMEVARASRRNMEVVLIGHAGHPEVEGTMGQYSSETGGMYLVETPADVEKLKSIVKDPSDLHYVSQTTLSVDETADVIEELRRVFPDIQGPRKDDICYATQNRQDAVRELSSDVDVMIVVGSKNSSNSTRLKELAEKLGTPGYLTDCPEDIKPEWFESKSKVGVTAGASAPEELVNQILERIKELVGARSVDEVLGREENMFFEVPKELQIKQVD
SIO_010081: VA249_RS02445
subclass of: SO_0000673
so part of: VA249_RS02445
location: 528855..529820
location: region:528855-529820:1
so has part: feature:528855-529820:1:exon

WP_221068714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528855-529820:1:exon

VA249_RS02450
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
alternative label: yehT
gene: btsR
locus tag: VA249_RS02450
old locus tag: VYA_04770
gene synonym: yehT
so part of: sequence
location: complement(529957..530685)
location: region:529957-530685:-1
so has part: feature:529957-530685:-1:exon
subclass of: SO_0000010

position:529957:-1
position: 529957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530685:-1
position: 530685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529957-530685:-1:exon

VA249_RS02450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
alternative label: yehT
gene: btsR
locus tag: VA249_RS02450
old locus tag: VYA_04770
gene synonym: yehT
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020196205.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: two-component system response regulator BtsR
translation: MLTALIIDDEQFAREELAELLNETGQIEVIGDAANAIVGLKKINELKPDVVFLDIQMPQVTGIELLGMLDPDTMPYVVFVTAYDQYAIQAFEDNAFDYLLKPVDPCRLNKTVARLHKAFNQSSLAQQLSSIAPNSLDQIPCIGHNRIVIMATETVECAYSDISGVHVRSLSQTASTQLTLKTIEEKTPLVRCHRQYLVSIKAISEIKLLENGLAEIITKTGFEIPVSRRYLKVLKEMLGISH
SIO_010081: VA249_RS02450
subclass of: SO_0000673
so part of: VA249_RS02450
location: complement(529957..530685)
location: region:529957-530685:-1
so has part: feature:529957-530685:-1:exon

WP_221068715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529957-530685:-1:exon

VA249_RS02455
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02455
old locus tag: VYA_04780
so part of: sequence
location: complement(530709..532388)
location: region:530709-532388:-1
so has part: feature:530709-532388:-1:exon
subclass of: SO_0000010

position:530709:-1
position: 530709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532388:-1
position: 532388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530709-532388:-1:exon

VA249_RS02455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02455
old locus tag: VYA_04780
EC number: 2.7.13.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020196204.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sensor histidine kinase
translation: MELVISLLQQMCVYLVLAYMLSKTPIILPLLSISSRLSHRLICYVLFSGFCILGTYFGLQINDAIANTRAIGAVMGGLFGGPVVGFAVGLTGGIHRYTLGGFTDLACAISTTAEGLIGGLLHVYLIKRNKGAMLFNPSVVFSITFIAEIVQMALLLAVAKPFSQAYELVSAIAAPMIIANSVGAALFMSILQDRKTIFEKYSATFSRRALSIADRSVGILSTGFNSENADKIARIIYEETKVGAVAITDQKKILAFVGIGDDHHRPNTPISSQSTLDSMEKNDIIYLDGSEHPYQCSLAKDCKLGSALIIPLRAGKEVVGTIKLYEPKRKLFSTANMSMAEGIAQLLSSQILYGDYQQQQALLAQAEIKLLHAQVNPHFLFNALNTISAITRRDPDKARELIQSLSHFFRSNLKQNINTVTLKEELAHVNAYLSIEKARFTDRLDVDINIDPELLDIKLPSFTLQPLVENAIKHGISNMLEGGKVQIYSRPHPKGYLITVEDNAGSYKAPQENHSGLGMEIVDKRLANQFGRDSALKITHQQDQFTRMSFIIPSLSRVQ
SIO_010081: VA249_RS02455
subclass of: SO_0000673
so part of: VA249_RS02455
location: complement(530709..532388)
location: region:530709-532388:-1
so has part: feature:530709-532388:-1:exon

WP_221068716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:530709-532388:-1:exon

VA249_RS02460
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02460
old locus tag: VYA_04790
so part of: sequence
location: complement(532516..534000)
location: region:532516-534000:-1
so has part: feature:532516-534000:-1:exon
subclass of: SO_0000010

position:532516:-1
position: 532516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534000:-1
position: 534000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532516-534000:-1:exon

VA249_RS02460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02460
old locus tag: VYA_04790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017017697.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbon starvation protein A
translation: MMWFLTCVAALIGGYFIYGAFVEKVFGINENRKTPAHTKADGVDYVRMPTKKVYLVQLLNIAGVGPIFGPIMGALYGPAAMLWIVVGCIFAGAVHDYFSGMLSIRNGGASVPTITGRYLGNGAKHFMNIFAIVLLLLVGVVFVSAPAGMITNLINEQTSLTVSMTTMVVLIFGYYILATIVPVDKIIGRFYPLFGALLIFMSVGLMTAVAFSGEHTVMSDFQVSDMFTNLNPNDMPLWPALFITIACGAISGFHATQSPLMARCMENEKNGRFVFYGAMIGEGVIALIWCAIALSFFGSLDALSEAVKNGGPGNVVYSASFGLLGTFGGVLAFLGVVILPITSGDTAFRSSRLILAEYFNMEQKTLRNRLLMAVPLFVIGGILTQVDFGIIWRYFGFANQTTAVMMLWTASAYLLRHNKLHWITTVPAVFMTTVCVTFILNNSTLGFGLPIQVSTIAGILFSLAVTGYVIKTSKGKGETDLADEDKPQAASETA
SIO_010081: VA249_RS02460
subclass of: SO_0000673
so part of: VA249_RS02460
location: complement(532516..534000)
location: region:532516-534000:-1
so has part: feature:532516-534000:-1:exon

WP_128811601.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:532516-534000:-1:exon

VA249_RS02465
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02465
old locus tag: VYA_04800
so part of: sequence
location: 534303..534644
location: region:534303-534644:1
so has part: feature:534303-534644:1:exon
subclass of: SO_0000010

position:534303:1
position: 534303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534644:1
position: 534644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534303-534644:1:exon

VA249_RS02465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02465
old locus tag: VYA_04800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005460271.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2799 domain-containing protein
translation: MKKAALGLALVLLAGCAATTEELAQSGDWYQVGYQDGVAGHTSRSVKELRALGDVKQGDYDQGYLEGVAEYCNPDFAYQMGLSGQYYEGVCEGTPQAQKFRMEWQRGWNEYNN
SIO_010081: VA249_RS02465
subclass of: SO_0000673
so part of: VA249_RS02465
location: 534303..534644
location: region:534303-534644:1
so has part: feature:534303-534644:1:exon

WP_128811600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534303-534644:1:exon

VA249_RS02470
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02470
old locus tag: VYA_04810
so part of: sequence
location: 534755..535084
location: region:534755-535084:1
so has part: feature:534755-535084:1:exon
subclass of: SO_0000010

position:534755:1
position: 534755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535084:1
position: 535084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534755-535084:1:exon

VA249_RS02470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02470
old locus tag: VYA_04810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009697642.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKVLLVGLALLPLTVGATNVLKESIKMKRNYDHNKHRITNSINHTKRNIKEITDGTYVENQVKREVNQTTRKYTNKVDNVKNMTNPEHIKRKANDKLNQEFDEWLYED
SIO_010081: VA249_RS02470
subclass of: SO_0000673
so part of: VA249_RS02470
location: 534755..535084
location: region:534755-535084:1
so has part: feature:534755-535084:1:exon

WP_221068717.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534755-535084:1:exon

VA249_RS02475
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: murQ
locus tag: VA249_RS02475
old locus tag: VYA_04820
so part of: sequence
location: complement(535181..536107)
location: region:535181-536107:-1
so has part: feature:535181-536107:-1:exon
subclass of: SO_0000010

position:535181:-1
position: 535181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536107:-1
position: 536107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535181-536107:-1:exon

VA249_RS02475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: murQ
locus tag: VA249_RS02475
old locus tag: VYA_04820
EC number: 4.2.1.126
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005425340.1
GO function: GO:0016835 - carbon-oxygen lyase activity [Evidence IEA]
GO process: GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009254 - peptidoglycan turnover [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-acetylmuramic acid 6-phosphate etherase
translation: MTNDALIAALAHLVSEGRNPDTMDIDLLPSLDIVQRLNQQDKLVPLAVEKVLPEIALAVDNITDAFKAGGRLVYMGAGTSGRLGVLDASECPPTFGVSDKMVIGLIAGGPEAILKAKEGAEDSPTLGEQDLKDIDFTNRDVVVGIAASGRTPYVIGGLEYANEIGATTVALSCNPDSPIADIANIAICPVVGPEALTGSTRLKSGTAQKLVLNMLTTASMIRLGKSYQNLMVDVKATNNKLVARAARIVMQATDCSKEQATEVLKQTDYEVKLAILMILTDLDIDSARTHLHHQDGFLRKAVESHQPK
SIO_010081: VA249_RS02475
subclass of: SO_0000673
so part of: VA249_RS02475
location: complement(535181..536107)
location: region:535181-536107:-1
so has part: feature:535181-536107:-1:exon

WP_221068719.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:535181-536107:-1:exon

VA249_RS02480
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02480
old locus tag: VYA_04830
so part of: sequence
location: complement(536172..537284)
location: region:536172-537284:-1
so has part: feature:536172-537284:-1:exon
subclass of: SO_0000010

position:536172:-1
position: 536172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537284:-1
position: 537284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536172-537284:-1:exon

VA249_RS02480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02480
old locus tag: VYA_04830
EC number: 2.7.1.170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005447941.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
GO process: GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009254 - peptidoglycan turnover [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anhydro-N-acetylmuramic acid kinase
translation: MNLNNLYIGVMSGTSMDGVDTALVEIENNHVRLIAHDDYPMPAHIKQTLLSVCTGQDTNLKTIGELDHQLGHLFANAVLQLLDKSGYSAEQIRAIGNHGQTVFHQPTGDLPFTTQLGDANIIAVKTGIDTVADFRRKDMALGGQGAPLVPAFHKSIFAMQDSTIVVLNIGGIANISVLHPEQAVIGYDTGPGNMLMDAWCERHTGQSFDKDALFALQGNIDAALLAQFLAEPYLTMSAPKSTGRELFNTDWLNKQIALHNASAQDVQRTLCEYSAVTIANEVEKFTHGQTPQLLVCGGGARNPLLMQRLIELLPQWQVATTNDKGVDSDYMEAMAFAWLAQRHINGLPSNLPEVTGASRLASLGVLYPKN
SIO_010081: VA249_RS02480
subclass of: SO_0000673
so part of: VA249_RS02480
location: complement(536172..537284)
location: region:536172-537284:-1
so has part: feature:536172-537284:-1:exon

WP_221068722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:536172-537284:-1:exon

VA249_RS02485
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: nagZ
locus tag: VA249_RS02485
old locus tag: VYA_04840
so part of: sequence
location: 537385..538368
location: region:537385-538368:1
so has part: feature:537385-538368:1:exon
subclass of: SO_0000010

position:537385:1
position: 537385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538368:1
position: 538368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537385-538368:1:exon

VA249_RS02485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: nagZ
locus tag: VA249_RS02485
old locus tag: VYA_04840
EC number: 3.2.1.52
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005533282.1
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: beta-N-acetylhexosaminidase
translation: MGPLWVDVAGYELTAEDREILEHPTVGGLILFTRNYHDSKQLQALTQSIRKAAKRPILIGVDQEGGRVQRFREGFSLIPAADEYAKHQNSEELARMGGWLMAAELIAHDIDLSFAPVLDKGHQCKAIGSRAFGEDLDTILRHSTAYMQGMKSVGMATTGKHFPGHGGVIADSHLETPYDERSDIFEQDMAIFKAQIEAGILDAMMPAHVIFPNYDDQPASGSEYWLKQILRQKLGFKGLIFSDDLTMEGAAIMGGPAERGAQALNAGCDMLLVCNKRDAQVEVLDNLPITSVPLADALLKKQSFSLSELKLSQEWKDASEAMKRLIG
SIO_010081: VA249_RS02485
subclass of: SO_0000673
so part of: VA249_RS02485
location: 537385..538368
location: region:537385-538368:1
so has part: feature:537385-538368:1:exon

WP_221068724.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:537385-538368:1:exon

VA249_RS02490
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02490
old locus tag: VYA_04850
so part of: sequence
location: 538607..539680
location: region:538607-539680:1
so has part: feature:538607-539680:1:exon
subclass of: SO_0000010

position:538607:1
position: 538607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539680:1
position: 539680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538607-539680:1:exon

VA249_RS02490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02490
old locus tag: VYA_04850
EC number: 2.5.1.54
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008077190.1
GO function: GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-deoxy-7-phosphoheptulonate synthase
translation: MQRSELSNINISEEQVLITPEELKVKLPLSEKARRFIQESRQTIADIIHKKDHRLLIVCGPCSIHDVEAAKDYAKRLKALSEQLSDQLYIVMRVYFEKPRTTVGWKGLINDPHLDGSFDIEHGLHVGRELLVELAEMEIPLATEALDPISPQYLADTFSWAAIGARTTESQTHREMASGLSMPIGFKNGTDGSLATAVNAMQAASSSHRFMGINREGQVALLTTQGNPNGHVILRGGKQTNYDSVSVNECEQEMAKSGLDASLMVDCSHANSRKDYRRQPLVAEDVIHQIREGNKSIIGLMIESHINEGNQSSDLALEEMKYGVSITDACINWDSTEALLRHAHEELVPFLENRLKG
SIO_010081: VA249_RS02490
subclass of: SO_0000673
so part of: VA249_RS02490
location: 538607..539680
location: region:538607-539680:1
so has part: feature:538607-539680:1:exon

WP_211920056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:538607-539680:1:exon

VA249_RS02495
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: tyrA
locus tag: VA249_RS02495
old locus tag: VYA_04860
so part of: sequence
location: 539705..540832
location: region:539705-540832:1
so has part: feature:539705-540832:1:exon
subclass of: SO_0000010

position:539705:1
position: 539705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540832:1
position: 540832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539705-540832:1:exon

VA249_RS02495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: tyrA
locus tag: VA249_RS02495
old locus tag: VYA_04860
EC number: 1.3.1.12
EC number: 5.4.99.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017449486.1
GO function: GO:0004106 - chorismate mutase activity [Evidence IEA]; GO:0008977 - prephenate dehydrogenase (NAD+) activity [Evidence IEA]; GO:0004665 - prephenate dehydrogenase (NADP+) activity [Evidence IEA]
GO process: GO:0046417 - chorismate metabolic process [Evidence IEA]; GO:0006571 - tyrosine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional chorismate mutase/prephenate dehydrogenase
translation: MAVELNALRDQIDAVDKQMLELLAQRLALVEKVGEVKSEHGLPIYAPDREAAMLASRRAEAEKMGIPPQLIEDILRRTMRESYASEKDSGFKCLNPELRSVVIIGGNGQLGGLFGRMFKLSGYQVKVLGSKDWDHADDILKDAGLVVVTVPIHLTEGVIEKLGNLPKDCILCDLTSIKSKPLQAMLNVHQGPVVGLHPMFGPDVPSLAKQVIVYCDGRGSEQYQWLLQQFGIWGASLCQIDAQEHDHGMTLIQALRHFTSFAYGMHLSKENPNIEQLLKLSSPIYRLELAMVGRLFGQDPNLYGDIILSSQENIDMIKRFHQRFGEALSVLDSKDKAEFVESFEQVSDWFGDYSQQFMNESQNLLKQANDNIHRG
SIO_010081: VA249_RS02495
subclass of: SO_0000673
so part of: VA249_RS02495
location: 539705..540832
location: region:539705-540832:1
so has part: feature:539705-540832:1:exon

WP_051118154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:539705-540832:1:exon

VA249_RS02500
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02500
old locus tag: VYA_04870
so part of: sequence
location: complement(540918..541919)
location: region:540918-541919:-1
so has part: feature:540918-541919:-1:exon
subclass of: SO_0000010

position:540918:-1
position: 540918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541919:-1
position: 541919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540918-541919:-1:exon

VA249_RS02500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02500
old locus tag: VYA_04870
EC number: 3.4.24.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012127055.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M23 family metallopeptidase
translation: MSKQNTTQTPTTDGRKQFKLGRLSTLTICVSFIALPAVIGGAWHMNQQQVQNAETLNQAIAKLESEKAQITALYEEQLDTNHTLSQSLTDKNNQIQLLGKRVFDVESVLGLADEELASEEHSLALEERIDAAAIDSAVRATMFRLIPNDSPMTYQRISSSYGSRVNPISGKRHVHTGIDLTCKRGEQILAPADGVIETVRPSNKGYGNYLTLRHSFGFSSSYAHLSKFKVKSGQFVSKGDVIAQCGNSGNSTGPHLHYEVRFLGRALNPQYLMDWTPENFNYVFEKEKKVKWGPLVQLIDNVVRLQINLTNSPYRDTSISTVSSEEKTETATN
SIO_010081: VA249_RS02500
subclass of: SO_0000673
so part of: VA249_RS02500
location: complement(540918..541919)
location: region:540918-541919:-1
so has part: feature:540918-541919:-1:exon

WP_221068726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:540918-541919:-1:exon

VA249_RS02505
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02505
old locus tag: VYA_04880
so part of: sequence
location: complement(541939..542316)
location: region:541939-542316:-1
so has part: feature:541939-542316:-1:exon
subclass of: SO_0000010

position:541939:-1
position: 541939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542316:-1
position: 542316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541939-542316:-1:exon

VA249_RS02505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02505
old locus tag: VYA_04880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005460291.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PilZ domain-containing protein
translation: MTEKRRFSRIIYQVPALIEQNDLALEATIQDLSLHGLLLKVTKVTELDTSHPVGIRFSFIQSEQVIQLIASIVSINSHEVRLKIINIDINSISQLKRFIELNIGNNELLNRELEHLSDLGETIKN
SIO_010081: VA249_RS02505
subclass of: SO_0000673
so part of: VA249_RS02505
location: complement(541939..542316)
location: region:541939-542316:-1
so has part: feature:541939-542316:-1:exon

WP_211920054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:541939-542316:-1:exon

VA249_RS02510
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: ettA
locus tag: VA249_RS02510
old locus tag: VYA_04890
so part of: sequence
location: complement(542568..544235)
location: region:542568-544235:-1
so has part: feature:542568-544235:-1:exon
subclass of: SO_0000010

position:542568:-1
position: 542568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544235:-1
position: 544235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542568-544235:-1:exon

VA249_RS02510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: ettA
locus tag: VA249_RS02510
old locus tag: VYA_04890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017110510.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0045900 - negative regulation of translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: energy-dependent translational throttle protein EttA
translation: MAEYVYTMSRVSKIVPPKRQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDTDIDGEARPQPGLNVGYLPQEPVLDESKTVREVVEEAVADVAGALKRLDAVYAAYAEPDADFDALAKEQGELEALIQVKDGHNLDNALERAADALRLPEWDQKIANLSGGERRRVAICRLLLEKPDMLLLDEPTNHLDAESVAWLERFLVDYTGTVVAITHDRYFLDNAAGWILELDRGEGIPWEGNYTSWLEQKDARLQQEASQEKARQKTIEKELEWVRQNPKGRQAKSKARMARFEELQNTEHQKRNETNELFIPPGERLGDKVIEVKNLTKSFDGRVLIDDLSFNMPKGAIVGIIGANGAGKSTLFKMLSGTEQPDSGTIELGETVKLASVEQFRDSMNDKNTVFQEISEGADIIKINNFEIPARAYCSRFNFKGSDQQKIIGELSGGERNRVHLAKLLKAGGNVLLLDEPTNDLDVETLRALEEALLEFPGCAMVISHDRWFLDRIATHIIDYRDEGQVNFYEGNYNEYMEWLKKTLGPEAAEPHRIKYKRVSK
SIO_010081: VA249_RS02510
subclass of: SO_0000673
so part of: VA249_RS02510
location: complement(542568..544235)
location: region:542568-544235:-1
so has part: feature:542568-544235:-1:exon

WP_211920053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:542568-544235:-1:exon

VA249_RS02515
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: sltY
locus tag: VA249_RS02515
old locus tag: VYA_04900
so part of: sequence
location: 544619..546565
location: region:544619-546565:1
so has part: feature:544619-546565:1:exon
subclass of: SO_0000010

position:544619:1
position: 544619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546565:1
position: 546565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544619-546565:1:exon

VA249_RS02515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: sltY
locus tag: VA249_RS02515
old locus tag: VYA_04900
EC number: 4.2.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020197985.1
GO component: GO:0016020 - membrane [Evidence IEA]; GO:0042597 - periplasmic space [Evidence IEA]
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]; GO:0008933 - lytic transglycosylase activity [Evidence IEA]
GO process: GO:0000270 - peptidoglycan metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: murein transglycosylase
translation: MTHMKFNVPELAKKVCYAAALCAVSVTTNASPSLEKQRQVYEQAQSLLDKNDIDGYLSIRSQIANYPLTPYVDYRVFLRQLSSKSPQQVDEFISEHDAFPFSRRIRAPYLNNLYRQKDWETITEFQKVEPSGERYQCIFYVAQLEQGKQVAAFKGAEHMWLRGKSIADECDPLFSAWDKAGERTDELILQRMLLAFDARNGGLMSYLQKLPESAKAKQQAKAMKALFDKPETVAAFAKKQPANEFNRAQSEYALEKLARKDTKRAQEAYADVVKGQKFSPEKAQALADYIAIRLIRTESDSLAKWRDDKIKTSQHLPLVESRIRLSIQNGDWRGVQKWIEVLDDKHQASLKWQYWQGRSEIALGDEVTGKQRLAKLVGERNFYSVAAANAIGQSIKYPSSTLKLDKNVIQPYQRSLVRIEELIETDKIAAAKSEWAHLLRRVSKEEKAMLAAYASSKRWHNLTVTASIQAKMWDNIPLRFPIAHRWWFNFYAEKHDIDPITMMSLARQESALDSEARSPVGARGLMQIMPATAKYTARKYKLKYQGTEELYNVGKNIEIGSHYLQGLMEDYDNNRIFALAAYNAGPNRVKTWRERTQGKVDAYSFIEAIPFKETRGYVQNILMFETYYRDLLGVDGSFLTQQEVNTKY
SIO_010081: VA249_RS02515
subclass of: SO_0000673
so part of: VA249_RS02515
location: 544619..546565
location: region:544619-546565:1
so has part: feature:544619-546565:1:exon

WP_221068728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:544619-546565:1:exon

VA249_RS02520
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: trpR
locus tag: VA249_RS02520
old locus tag: VYA_04910
so part of: sequence
location: 546579..546881
location: region:546579-546881:1
so has part: feature:546579-546881:1:exon
subclass of: SO_0000010

position:546579:1
position: 546579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546881:1
position: 546881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546579-546881:1:exon

VA249_RS02520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: trpR
locus tag: VA249_RS02520
old locus tag: VYA_04910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005447954.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: trp operon repressor
translation: MSHEPEYKDWQQIVELIRSSANDQQHEMLLTMLMTPDERESLIARVNILSELLKGELSQRQISQMLGVGIATITRGSNELKSKSDADKDKLKTLLEQGAQ
SIO_010081: VA249_RS02520
subclass of: SO_0000673
so part of: VA249_RS02520
location: 546579..546881
location: region:546579-546881:1
so has part: feature:546579-546881:1:exon

WP_221068729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:546579-546881:1:exon

VA249_RS02525
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: yjjX
locus tag: VA249_RS02525
old locus tag: VYA_04920
so part of: sequence
location: complement(546964..547497)
location: region:546964-547497:-1
so has part: feature:546964-547497:-1:exon
subclass of: SO_0000010

position:546964:-1
position: 546964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547497:-1
position: 547497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546964-547497:-1:exon

VA249_RS02525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: yjjX
locus tag: VA249_RS02525
old locus tag: VYA_04920
EC number: 3.6.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017190118.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inosine/xanthosine triphosphatase
translation: MATQKVAIASLNPAKIKAVESAFQSAFPEQSFEFVGVSVPSEVADQPMSNEETHLGALNRVRNAKAKTPNADFYVGLEAGIEENVTFAWMVIESDTHRGESRSASLMLPPEVLQKLKHANELGDVMDEVFGTDNIKQKGGAISLLTQNQLTRSSVYHQALILALIPFTNPEHFPANL
SIO_010081: VA249_RS02525
subclass of: SO_0000673
so part of: VA249_RS02525
location: complement(546964..547497)
location: region:546964-547497:-1
so has part: feature:546964-547497:-1:exon

WP_221068731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:546964-547497:-1:exon

VA249_RS02530
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: pheA
locus tag: VA249_RS02530
old locus tag: VYA_04930
so part of: sequence
location: complement(547558..548736)
location: region:547558-548736:-1
so has part: feature:547558-548736:-1:exon
subclass of: SO_0000010

position:547558:-1
position: 547558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548736:-1
position: 548736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547558-548736:-1:exon

VA249_RS02530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: pheA
locus tag: VA249_RS02530
old locus tag: VYA_04930
EC number: 4.2.1.51
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017072899.1
GO function: GO:0004664 - prephenate dehydratase activity [Evidence IEA]
GO process: GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prephenate dehydratase
translation: MTDQPISLEEIRLRLNELDDQLLSLLSERRKLSIEVAKSKVQTSKPVRDAVREQQLLVKLITNGRDKYELDAQYITKLFHTIIEDSVLLQQSYLQNLVNPQQSRKPLARVAFLGAKGSYSHLASREYFSRKNTELIELNCDHFKEVTQTVESGHADYGVLPIENTSSGSINEVYDLLQHTTLYIVGELTQPIEHCLVATKDIRLENINTLYSHPQPHQQCSEFLSRMKGVKLESCASTADAMQKVQELNRDDVAAIGNASSGKLYGLQAIQGNIANQTENHTRFIVVARKPVEVSTQIPAKTTLIMSTSQEAGSLVQTLLVLQRYGINMTKLESRPIMGNPWEEMFYVDLESHLGSTEMQHVLDELTKITKHLKVLGCYPSENIKPTQVKLS
SIO_010081: VA249_RS02530
subclass of: SO_0000673
so part of: VA249_RS02530
location: complement(547558..548736)
location: region:547558-548736:-1
so has part: feature:547558-548736:-1:exon

WP_221068733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547558-548736:-1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 1074311
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01859
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Phe leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(548750..548871)
location: region:548750-548871:-1
so has part: feature:548750-548871:-1:region

position:548750:-1
position: 548750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548871:-1
position: 548871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548750-548871:-1:region

VA249_RS02535
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: raiA
locus tag: VA249_RS02535
old locus tag: VYA_04940
so part of: sequence
location: complement(548979..549305)
location: region:548979-549305:-1
so has part: feature:548979-549305:-1:exon
subclass of: SO_0000010

position:548979:-1
position: 548979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549305:-1
position: 549305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548979-549305:-1:exon

VA249_RS02535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: raiA
locus tag: VA249_RS02535
old locus tag: VYA_04940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012127060.1
GO component: GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0045182 - translation regulator activity [Evidence IEA]
GO process: GO:0009386 - translational attenuation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome-associated translation inhibitor RaiA
translation: MTMNITGKNIEITSAIRAHIESKFKKLEKWQVDIIGCQATFSEEPNKQKKFEAVIKVPKGQLIASATHEDLYAAINEVEQKLERQLNKLTHKPEARRASKPELVEEEE
SIO_010081: VA249_RS02535
subclass of: SO_0000673
so part of: VA249_RS02535
location: complement(548979..549305)
location: region:548979-549305:-1
so has part: feature:548979-549305:-1:exon

WP_128811587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548979-549305:-1:exon

VA249_RS02540
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02540
old locus tag: VYA_04950
so part of: sequence
location: complement(549739..551232)
location: region:549739-551232:-1
so has part: feature:549739-551232:-1:exon
subclass of: SO_0000010

position:549739:-1
position: 549739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551232:-1
position: 551232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549739-551232:-1:exon

VA249_RS02540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02540
old locus tag: VYA_04950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011105683.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase F
translation: MDVSVTLSKLWVSLLLLLSATAFSLELSPLRQPPYTGDLDVIKEKNVLRVLVSADLGFYYIEGGEPKGIGAELLAHFEKELRKIKPKLNVQIIPVSRDELLPSLEQGLGDLVVANLTITNTRKDKVDFSDPIMTGIEEWIVTNKATPVMTNIDQLSGKEIWLRASSSYFESIQALNKKLNKKGLAPVVVHFIEETLQDYELVGMLNNGYVKAIVLDSHKAKLWMNVMNDIRAQTKIPIRTGGKIAWAMRHDSPELMKIVNKFIRTSKSGTLLGNVIYGKYISNTNWLNKALNPKKIAQLEKLSSLFSRYADKYDFDYLMVAAVAYQESGFDNSLVSSRGAVGVMQILPSTASDPNVNIKNVRNLENNVHAGVKYMAFLRRYYFSDDAITKQNKMYFTLAAYNAGPGNVERMRKRAAQRGYDPNIWFHNVEVVMRSGLGETVRYVTNVNRYYVIYKQLESLDLAKSLDNVLLVPDDPVFMTPLRRISQTPNTKTPLSN
SIO_010081: VA249_RS02540
subclass of: SO_0000673
so part of: VA249_RS02540
location: complement(549739..551232)
location: region:549739-551232:-1
so has part: feature:549739-551232:-1:exon

WP_221068735.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:549739-551232:-1:exon

VA249_RS02545
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: bamD
locus tag: VA249_RS02545
old locus tag: VYA_04960
so part of: sequence
location: complement(551352..552080)
location: region:551352-552080:-1
so has part: feature:551352-552080:-1:exon
subclass of: SO_0000010

position:551352:-1
position: 551352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552080:-1
position: 552080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551352-552080:-1:exon

VA249_RS02545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: bamD
locus tag: VA249_RS02545
old locus tag: VYA_04960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005381876.1
GO component: GO:0019867 - outer membrane [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0065003 - protein-containing complex assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane protein assembly factor BamD
translation: MKRQTLIGLLAVSFLFGCASKEEIVPDVPPSELYADTQTSLQSGNWLSAIEQLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFMRLNPTHSKMDWVLYMRGLTHMAQDRNFMHDLFSVDRSDRDPEPVKKAFDDFKKLLERYPNSPYAEDSQKRMVALKNRLAEYDLATADFYLRREAWIAAINRTQELQKAYPNTEAARKSLKIQLEAYKQLKLDDAIAHTEELIKLNPIK
SIO_010081: VA249_RS02545
subclass of: SO_0000673
so part of: VA249_RS02545
location: complement(551352..552080)
location: region:551352-552080:-1
so has part: feature:551352-552080:-1:exon

WP_221068737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:551352-552080:-1:exon

VA249_RS02550
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rluD
locus tag: VA249_RS02550
old locus tag: VYA_04970
so part of: sequence
location: 552217..553194
location: region:552217-553194:1
so has part: feature:552217-553194:1:exon
subclass of: SO_0000010

position:552217:1
position: 552217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553194:1
position: 553194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552217-553194:1:exon

VA249_RS02550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rluD
locus tag: VA249_RS02550
old locus tag: VYA_04970
EC number: 5.4.99.23
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020335946.1
GO function: GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
translation: MAQQIVLTNTVKDSQLGQRLDQAIAELFADFSRSRLKEWLLDGKVQVNGEIVTKPRTKVMGGEEITLQAELEDEQRWEAQDIPLDIVYEDEDIIVINKPRDFVVHPGAGTPDGTVLNALLHHYPDIAEVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVRALQKRNITREYEAIAIGRMTAGGKVAQPIGRHSTKRTLMAVSPMGKEAVTHYRVAEHFREHTRIRLRLETGRTHQIRVHMSYLQHPLLGDTAYGGRARIPTGASEELTAMIRGFDRQALHAVMLRFEHPITGEQLEFHAPVPDDMVIMTEALRKDTEEYGLPDEF
SIO_010081: VA249_RS02550
subclass of: SO_0000673
so part of: VA249_RS02550
location: 552217..553194
location: region:552217-553194:1
so has part: feature:552217-553194:1:exon

WP_128811585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:552217-553194:1:exon

VA249_RS02555
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: pgeF
locus tag: VA249_RS02555
old locus tag: VYA_04980
so part of: sequence
location: 553196..553924
location: region:553196-553924:1
so has part: feature:553196-553924:1:exon
subclass of: SO_0000010

position:553196:1
position: 553196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553924:1
position: 553924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553196-553924:1:exon

VA249_RS02555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: pgeF
locus tag: VA249_RS02555
old locus tag: VYA_04980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005447962.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidoglycan editing factor PgeF
translation: MKAIVPNWPAPKHVKAFSSTRVGGFSSSPYKGLNLGAHVGDDLSIVEKNRDGLVQQANMPTAPIWLNQTHSTVVAQVNAPTQRVLDADGVFTSSSYVVCSAMTADCLPVLLTNVQGTQVAAVHAGWRGLANGIVENALDLFSGNVMAWLGPAIGPQEFEVGEEVLQAFVDFDSQAHQAFTPRNIEGKWLADMSKLATQRLNKAGVTQVFDSGLCTFQNREDFYSYRRDGVTGRQATFIWIED
SIO_010081: VA249_RS02555
subclass of: SO_0000673
so part of: VA249_RS02555
location: 553196..553924
location: region:553196-553924:1
so has part: feature:553196-553924:1:exon

WP_221068739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:553196-553924:1:exon

VA249_RS02560
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: clpB
locus tag: VA249_RS02560
old locus tag: VYA_04990
so part of: sequence
location: 554067..556640
location: region:554067-556640:1
so has part: feature:554067-556640:1:exon
subclass of: SO_0000010

position:554067:1
position: 554067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556640:1
position: 556640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554067-556640:1:exon

VA249_RS02560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: clpB
locus tag: VA249_RS02560
old locus tag: VYA_04990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004739481.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0042026 - protein refolding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent chaperone ClpB
translation: MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLDVDVTHLRSKLSEMLDRLPKVSGIGGDVQLSSSMGTLFNLCDKVAQKRQDSYISSEVFLLAALEDRGPLGQLLKEMGLSEQKVSQAIEKIRGGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLDVLNDELNEKEREYAELEEVWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAEMQEMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFATLDYQGIKNEVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLAKRLEEKGYQLEVSDKALDLIAQVGFDPVYGARPLKRAIQQNVENPLAKSILAGQILPDKKVQLIVNNDQIIAHQ
SIO_010081: VA249_RS02560
subclass of: SO_0000673
so part of: VA249_RS02560
location: 554067..556640
location: region:554067-556640:1
so has part: feature:554067-556640:1:exon

WP_221068741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:554067-556640:1:exon

VA249_RS02565
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02565
old locus tag: VYA_r00040
so part of: sequence
location: 557197..558751
location: region:557197-558751:1
so has part: feature:557197-558751:1:exon
subclass of: SO_0000573

position:557197:1
position: 557197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558751:1
position: 558751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557197-558751:1:exon

VA249_RS02565
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1074311
locus tag: VA249_RS02565
old locus tag: VYA_r00040
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: VA249_RS02565
subclass of: SO_0000673
so part of: VA249_RS02565
location: 557197..558751
location: region:557197-558751:1
so has part: feature:557197-558751:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:557197-558751:1:exon

VA249_RS02570
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02570
old locus tag: VYA_t00120
so part of: sequence
location: 558888..558963
location: region:558888-558963:1
so has part: feature:558888-558963:1:exon
subclass of: SO_0000663

position:558888:1
position: 558888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558963:1
position: 558963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558888-558963:1:exon

VA249_RS02570
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1074311
locus tag: VA249_RS02570
old locus tag: VYA_t00120
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:558921..558923,aa:Ala,seq:ggc)
SIO_010081: VA249_RS02570
subclass of: SO_0000673
so part of: VA249_RS02570
location: 558888..558963
location: region:558888-558963:1
so has part: feature:558888-558963:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:558888-558963:1:exon

VA249_RS02575
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02575
old locus tag: VYA_t00130
so part of: sequence
location: 559001..559076
location: region:559001-559076:1
so has part: feature:559001-559076:1:exon
subclass of: SO_0000663

position:559001:1
position: 559001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559076:1
position: 559076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559001-559076:1:exon

VA249_RS02575
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1074311
locus tag: VA249_RS02575
old locus tag: VYA_t00130
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:559035..559037,aa:Glu,seq:ttc)
SIO_010081: VA249_RS02575
subclass of: SO_0000673
so part of: VA249_RS02575
location: 559001..559076
location: region:559001-559076:1
so has part: feature:559001-559076:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:559001-559076:1:exon

VA249_RS02580
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02580
old locus tag: VYA_r00050
so part of: sequence
location: 559404..562296
location: region:559404-562296:1
so has part: feature:559404-562296:1:exon
subclass of: SO_0000573

position:559404:1
position: 559404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562296:1
position: 562296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559404-562296:1:exon

VA249_RS02580
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1074311
locus tag: VA249_RS02580
old locus tag: VYA_r00050
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: VA249_RS02580
subclass of: SO_0000673
so part of: VA249_RS02580
location: 559404..562296
location: region:559404-562296:1
so has part: feature:559404-562296:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:559404-562296:1:exon

VA249_RS02585
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rrf
locus tag: VA249_RS02585
old locus tag: VYA_r00060
so part of: sequence
location: 562388..562504
location: region:562388-562504:1
so has part: feature:562388-562504:1:exon
subclass of: SO_0000573

position:562388:1
position: 562388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562504:1
position: 562504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562388-562504:1:exon

VA249_RS02585
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1074311
gene: rrf
locus tag: VA249_RS02585
old locus tag: VYA_r00060
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: VA249_RS02585
subclass of: SO_0000673
so part of: VA249_RS02585
location: 562388..562504
location: region:562388-562504:1
so has part: feature:562388-562504:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:562388-562504:1:exon

VA249_RS02590
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02590
old locus tag: VYA_t00140
so part of: sequence
location: 562570..562646
location: region:562570-562646:1
so has part: feature:562570-562646:1:exon
subclass of: SO_0000663

position:562570:1
position: 562570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562646:1
position: 562646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562570-562646:1:exon

VA249_RS02590
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1074311
locus tag: VA249_RS02590
old locus tag: VYA_t00140
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:562604..562606,aa:Asp,seq:gtc)
SIO_010081: VA249_RS02590
subclass of: SO_0000673
so part of: VA249_RS02590
location: 562570..562646
location: region:562570-562646:1
so has part: feature:562570-562646:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:562570-562646:1:exon

VA249_RS02595
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02595
old locus tag: VYA_t00150
so part of: sequence
location: 562682..562758
location: region:562682-562758:1
so has part: feature:562682-562758:1:exon
subclass of: SO_0000663

position:562682:1
position: 562682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562758:1
position: 562758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562682-562758:1:exon

VA249_RS02595
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1074311
locus tag: VA249_RS02595
old locus tag: VYA_t00150
product: tRNA-Trp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:562716..562718,aa:Trp,seq:cca)
SIO_010081: VA249_RS02595
subclass of: SO_0000673
so part of: VA249_RS02595
location: 562682..562758
location: region:562682-562758:1
so has part: feature:562682-562758:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:562682-562758:1:exon

VA249_RS02600
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02600
so part of: sequence
location: complement(562846..563881)
location: region:562846-563881:-1
so has part: feature:562846-563881:-1:exon
subclass of: SO_0000010

position:562846:-1
position: 562846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563881:-1
position: 563881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562846-563881:-1:exon

VA249_RS02600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611686.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MDSLDNIDFKKLASQQKSIQMKMRLLALAHFKDGHSRTQIAKFLKVSRTSVNKWVQTFLEDGLDGLQEKPRTDRPAFLNPQQREQLSLYIKNRAEDLSGGRLTGADIHTYIAEEFGKYYHPDSIYYLLNHMGFSWITSRSKHPKQSQQIQDDFKKFKIETILKIPGHMGLESVDVWFQDEARFGQKNTTTRLWAERGSRPRAVKQQQFEYAYLFGSVCPTRGIGEAMVVPWVNKEIMVEHLKQISAVTEKGRHAVVIMDGAGWHTEDIADEFQNISVIKLPPYSPELNPIEQVWSWLRQHYLANQSFSDYEDIVSKVCSAWNSFLECSTRVSKMCSRRWIDLTS
SIO_010081: VA249_RS02600
subclass of: SO_0000673
so part of: VA249_RS02600
location: complement(join(562846..563421,563423..563881))
location: region:562846-563881:-1
so has part: feature:563423-563881:-1:exon
so has part: feature:562846-563421:-1:exon

WP_221068743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:563423-563881:-1:exon

position:563423:-1
position: 563423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:562846-563421:-1:exon

position:563421:-1
position: 563421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VA249_RS24010
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS24010
old locus tag: VYA_05030
so part of: sequence
location: 564035..565507
location: region:564035-565507:1
so has part: feature:564035-565507:1:exon
subclass of: SO_0000010

position:564035:1
position: 564035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565507:1
position: 565507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564035-565507:1:exon

VA249_RS24010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS24010
old locus tag: VYA_05030
inference: COORDINATES: protein motif:HMM:NF015154.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase
translation: MAKLIKQCRDQGLMKDEEMLKRKQLANSTKGYKVNFDKFIQELLIKEKARGFIDEWPEHTFIYAHFLRADIASFEEFWSIGAKSKNHKNSFTAVQGSITSGRGSYGIDLASIGRSKYKTENTKFYTGSSNTFETKVRFIDTLLLSSKASLDDIGELVSIPKMTLADGMISRMDDLYCEDQSLFDRYAVRDAEIALKYGLQMQRFALVDMCEDTGLELKQLPSTLGNFAVSLFKHTCGGVNEMHEFLGYEKRKGEYYHAKSNGIRKSVTIAKTVSREYTDALAVNCFYGGANFGAYFGVTEQGDYNDYDLSGAYTTALVDILEADYPNSFESKNIEDYLGHTMGFAYVRFKHPEGTKWGLLPCRTDLRGIYYPLEGATYVTAPELQLAHDAGVEIEILHGQVIPWKQGSVSQFKAFTRIIRKQRSKYKKEGNELYDQLWKLIGNTLYGKVGQGLREKSGFDVSPGLSSKIPYSPVTNAHYAAHATGFVRPQ
SIO_010081: VA249_RS24010
subclass of: SO_0000673
so part of: VA249_RS24010
location: 564035..565507
location: region:564035-565507:1
so has part: feature:564035-565507:1:exon

WP_225927095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:564035-565507:1:exon

VA249_RS24015
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS24015
old locus tag: VYA_05040
so part of: sequence
location: 565504..566553
location: region:565504-566553:1
so has part: feature:565504-566553:1:exon
subclass of: SO_0000010

position:565504:1
position: 565504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566553:1
position: 566553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565504-566553:1:exon

VA249_RS24015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS24015
old locus tag: VYA_05040
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMEIIRKLTMDNDVQIVSATTDGFLTNATPEQLGNCLDGPLAKRFQRICKEVSGEDMMQLKHHAKQIISMKTRGQLTTELGNTKPVCAKAGVKPPKGVNENAWMVELFLDRYPKQKIERSHLASARDMWLKEMDLVSIHTEQTLNLEWDFKRRPINPRIVKVRHPVSGEVVEHLSFDTVPWNTVDEGLDARTYFDEWRVNNCLKGMDDWDNWMDFYKVRRYFKGTGVKYLEDGSEGIFKVQMLRAITQGKWGLPEAPQRAPRGHYDKMVAMFDADGIEGITKQDLANSKGRKLLESALPITTRMLPLLSWFARKYPMVDLTLVLHPDEVDEAVLMLEEYNLKCTEKLVA
SIO_010081: VA249_RS24015
subclass of: SO_0000673
so part of: VA249_RS24015
location: 565504..566553
location: region:565504-566553:1
so has part: feature:565504-566553:1:exon

WP_225927096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:565504-566553:1:exon

VA249_RS02610
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02610
old locus tag: VYA_05050
so part of: sequence
location: 567065..567316
location: region:567065-567316:1
so has part: feature:567065-567316:1:exon
subclass of: SO_0000010

position:567065:1
position: 567065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567316:1
position: 567316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567065-567316:1:exon

VA249_RS02610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02610
old locus tag: VYA_05050
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGFWDTVGKAASTIGKEVVKQGGDALERSKQYREQCEDMSDDQLVSVIKRERSRTPLKAGAASGELKRRGYDQDTITFMVQNS
SIO_010081: VA249_RS02610
subclass of: SO_0000673
so part of: VA249_RS02610
location: 567065..567316
location: region:567065-567316:1
so has part: feature:567065-567316:1:exon

WP_221068745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:567065-567316:1:exon

VA249_RS02615
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02615
old locus tag: VYA_05060
so part of: sequence
location: 567334..567993
location: region:567334-567993:1
so has part: feature:567334-567993:1:exon
subclass of: SO_0000010

position:567334:1
position: 567334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567993:1
position: 567993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567334-567993:1:exon

VA249_RS02615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02615
old locus tag: VYA_05060
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGFWKKVIGGAVIGVGAIAAAPFTGGGSILGAATLASSLAGAGAVAAGAGVAGAAAGAALDSRSKDKQQKNLQQARQQGKQESDAENAIALEKLRDELAVILRDIEVRESFLLTAFAVGICAANADHEICGDERAELVELVAGLGKENVLSKATLQRLDAWFNNPPNLNTVWQMIEKNNFNNPEHIVIFDKIVHMVIWADDEQNTHEEEFIEAWNSLAA
SIO_010081: VA249_RS02615
subclass of: SO_0000673
so part of: VA249_RS02615
location: 567334..567993
location: region:567334-567993:1
so has part: feature:567334-567993:1:exon

WP_221068747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:567334-567993:1:exon

VA249_RS02620
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02620
old locus tag: VYA_05070
so part of: sequence
location: 568007..568696
location: region:568007-568696:1
so has part: feature:568007-568696:1:exon
subclass of: SO_0000010

position:568007:1
position: 568007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568696:1
position: 568696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568007-568696:1:exon

VA249_RS02620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02620
old locus tag: VYA_05070
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDDLHKLKARRAKLRQLGKSSHIRPVPNNVDTNRHLDGDIDQSTLAFADMSQEYSQRIQNVDVSVSREEVQALFKSFDDNIDSLDHILEPVFLSLLDGTMRAFKVGTKQGITATRLYSECKSFSYDNPNVHAPMLDSYTEYLNEQEYIKEHASRAQYNKGKLVYHDDSIAMNMRDSSKMSKAHQDHFNGGKLPPMAMMVAKKFMKAVLMLKGLISLAKGRKSITLYRVQ
SIO_010081: VA249_RS02620
subclass of: SO_0000673
so part of: VA249_RS02620
location: 568007..568696
location: region:568007-568696:1
so has part: feature:568007-568696:1:exon

WP_221068749.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:568007-568696:1:exon

VA249_RS02625
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02625
old locus tag: VYA_05080
so part of: sequence
location: 568693..569811
location: region:568693-569811:1
so has part: feature:568693-569811:1:exon
subclass of: SO_0000010

position:568693:1
position: 568693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569811:1
position: 569811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568693-569811:1:exon

VA249_RS02625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02625
old locus tag: VYA_05080
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MICNNLKKNKALTDADIKEIINSEENLVATSFENNRGKEIGKSDKTEAHLREEIDKGYIVNKKGNKVRDLTDEELVIRQNMANKMSEAQKEIDSKTNNAVLKNLFSADSTIKKNAEDEYELLQSNQGKKINDKNKQKYVEKKLQERKEVRYRMAKDARGAAANQSLGDIIIFMIKPLYYELKDCFVQGIEKGVNAKSFKSALSIRMNRMKKHILAQAGTSLKDGMFSFIKKFISMLLEGIVNCFVGVFKNIVRMIKEGVKILMQIGPVLMDSNKTMAEKGDALLKLAASSLTIFASIGIETWLNSINIGEPWSIIISSVLTAVLTTLTMYLLDKMDLFGLKKEARLNRIDEILSLKVEESRNEMFTMVNGLA
SIO_010081: VA249_RS02625
subclass of: SO_0000673
so part of: VA249_RS02625
location: 568693..569811
location: region:568693-569811:1
so has part: feature:568693-569811:1:exon

WP_221068751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:568693-569811:1:exon

VA249_RS02630
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02630
so part of: sequence
location: 570136..570224
location: region:570136-570224:1
so has part: feature:570136-570224:1:exon
subclass of: SO_0000663

position:570136:1
position: 570136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570224:1
position: 570224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:570136-570224:1:exon

VA249_RS02630
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1074311
locus tag: VA249_RS02630
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:570204..570206,aa:Ser,seq:cga)
SIO_010081: VA249_RS02630
subclass of: SO_0000673
so part of: VA249_RS02630
location: 570136..570224
location: region:570136-570224:1
so has part: feature:570136-570224:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:570136-570224:1:exon

VA249_RS02635
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02635
old locus tag: VYA_05090
so part of: sequence
location: 570332..571768
location: region:570332-571768:1
so has part: feature:570332-571768:1:exon
subclass of: SO_0000010

position:570332:1
position: 570332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571768:1
position: 571768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:570332-571768:1:exon

VA249_RS02635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02635
old locus tag: VYA_05090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017428762.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1182 family transposase
translation: MLQEPTPQQYELEMVTMEQLVPKDHLVRKIDNAIDFEFIRDEVAHLYCKDNGRPPVDPVRLFKIILLGYIFGIKSERQLVKEIEVNVAYRWFLRMSLTEKVIHASTLSQNRIRRFNGTDVFERIFINIVEQAISKGLVAGQELFTDSTHLKANANKNKHTNKVTAVRASAYLDMLDEDVTLDREIAGKKPLKARGSESKTKNTKTSTTDPESGFMTRDNKPQGFFYLDHRTVDGQHGIILDTYTTAGNINDSQPYVQRLDYTLATFQLNPIAVGLDAGYFTAPVAESLERRGILGVFGYRRPSRTKNTFKKKHFTYDAQRDSYQCPNGQELLYKTTSRDAYREYHSDPKECAFCPMRNDCTQSKNMKKVIARHIYSDAVERANQMRLSSYGKKTYRRRSETVERSFADAKQHHGHRYARFRGLANVQMQCWLAAAAQNIKKIALVMSYLRKMGLNMAEIRQILASVCLCNEWKLLRTI
SIO_010081: VA249_RS02635
subclass of: SO_0000673
so part of: VA249_RS02635
location: 570332..571768
location: region:570332-571768:1
so has part: feature:570332-571768:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:570332-571768:1:exon

VA249_RS02640
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02640
old locus tag: VYA_05100
so part of: sequence
location: 572009..572341
location: region:572009-572341:1
so has part: feature:572009-572341:1:exon
subclass of: SO_0000010

position:572009:1
position: 572009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572341:1
position: 572341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572009-572341:1:exon

VA249_RS02640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02640
old locus tag: VYA_05100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017633933.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1904 domain-containing protein
translation: MPHLRFRAVEPQMVQALSKPLIDELEPLMNSPREDFTFEYIYSTFFSEGEVSGAYPFVEVLWFDRGQETQDKVAKIITNQVRSVVGEDINVAVIFTALSPNGYYDNGEHY
SIO_010081: VA249_RS02640
subclass of: SO_0000673
so part of: VA249_RS02640
location: 572009..572341
location: region:572009-572341:1
so has part: feature:572009-572341:1:exon

WP_221068760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:572009-572341:1:exon

VA249_RS02645
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: mepA
locus tag: VA249_RS02645
old locus tag: VYA_05110
so part of: sequence
location: 572354..573193
location: region:572354-573193:1
so has part: feature:572354-573193:1:exon
subclass of: SO_0000010

position:572354:1
position: 572354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573193:1
position: 573193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572354-573193:1:exon

VA249_RS02645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: mepA
locus tag: VA249_RS02645
old locus tag: VYA_05110
EC number: 3.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020194967.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: penicillin-insensitive murein endopeptidase
translation: MKLGLFFCLSAIFSVSINATPWEQVPGPTNNISSSIGSYANGCLDGAQPLPLDGVGYQVLRSKTKRYYGHPHSILFIEKLSQKVQQELDTTLLIGDLSLARGGRFSSGHSSHQTGLDIDIWLRLADKPLSYNELQLPTPMSVVDLKNYQILEHRWEDRHFDIIRYAAQSTDVARIFVHPVIKEQLCKEAPNNDRSWLRKVRPWWGHHYHFHVRLVCPESSLNCVNQALPPQGDGCGAELASWKPKAVLEPSTNKRKTNKVKQKKRKVIPAQCQPLISMR
SIO_010081: VA249_RS02645
subclass of: SO_0000673
so part of: VA249_RS02645
location: 572354..573193
location: region:572354-573193:1
so has part: feature:572354-573193:1:exon

WP_221068761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:572354-573193:1:exon

VA249_RS02650
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02650
old locus tag: VYA_05120
so part of: sequence
location: 573482..573790
location: region:573482-573790:1
so has part: feature:573482-573790:1:exon
subclass of: SO_0000010

position:573482:1
position: 573482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573790:1
position: 573790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573482-573790:1:exon

VA249_RS02650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02650
old locus tag: VYA_05120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005391608.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTMICAKEFAEWLRHRFSSDTKGVLLTREDVNHLTGRQRLDPGFVNDVHYELMQYGMAFVTDTSRENFYLVPVSQAENWRERLEYHFEKELFCNIYPIEKSG
SIO_010081: VA249_RS02650
subclass of: SO_0000673
so part of: VA249_RS02650
location: 573482..573790
location: region:573482-573790:1
so has part: feature:573482-573790:1:exon

WP_128811580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:573482-573790:1:exon

VA249_RS02655
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02655
old locus tag: VYA_05130
so part of: sequence
location: complement(573831..574085)
location: region:573831-574085:-1
so has part: feature:573831-574085:-1:exon
subclass of: SO_0000010

position:573831:-1
position: 573831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574085:-1
position: 574085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573831-574085:-1:exon

VA249_RS02655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02655
old locus tag: VYA_05130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014205669.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YfhL family 4Fe-4S dicluster ferredoxin
translation: MALLITDKCINCDMCDPECPNGAISMGDSIFEIDPALCTECKGHYEKPTCQSVCPITKCIITDPNHVETEDQLLEKFVIIQGLA
SIO_010081: VA249_RS02655
subclass of: SO_0000673
so part of: VA249_RS02655
location: complement(573831..574085)
location: region:573831-574085:-1
so has part: feature:573831-574085:-1:exon

WP_221068763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:573831-574085:-1:exon

VA249_RS02660
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: yegQ
locus tag: VA249_RS02660
old locus tag: VYA_05140
so part of: sequence
location: complement(574088..575488)
location: region:574088-575488:-1
so has part: feature:574088-575488:-1:exon
subclass of: SO_0000010

position:574088:-1
position: 574088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575488:-1
position: 575488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574088-575488:-1:exon

VA249_RS02660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: yegQ
locus tag: VA249_RS02660
old locus tag: VYA_05140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010648426.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA 5-hydroxyuridine modification protein YegQ
translation: MTTEKAFVPELLSPAGSLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLQIGINEAHALGKKLYVVCNIQPHNSKLKTFIRDLKPVVEMGPDALIMSDPGLIMMVREAFPEMPIHLSVQANAVNWATVKFWAANGVERVIVSRELSLEEIEEIREHCPETELEVFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWEYKVEEGKENDAGQIVEAFDPNEAQAIEVADERPETTIGRGKPTDEVVLLSESHRPEEKMAAFEDEHGTYIMNSKDLRAIQHVERLTKMGVHSLKIEGRTKSFYYCARTAQVYRKAIDDAVAGKPFDESLMGTLESLAHRGYTEGFLRRHTHDSYQNYDYGYSVSDAQQFVGEFTGKRRGDLAEVEVKNKFVVGDSLELMTPKGNVIFTLEAMENRKSESIEDAKGNGHFVFIPVPQDMDLEYGLLMRNLNAGQDTRNPTGK
SIO_010081: VA249_RS02660
subclass of: SO_0000673
so part of: VA249_RS02660
location: complement(574088..575488)
location: region:574088-575488:-1
so has part: feature:574088-575488:-1:exon

WP_221068765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:574088-575488:-1:exon

VA249_RS02665
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: rdgC
locus tag: VA249_RS02665
old locus tag: VYA_05150
so part of: sequence
location: complement(575653..576567)
location: region:575653-576567:-1
so has part: feature:575653-576567:-1:exon
subclass of: SO_0000010

position:575653:-1
position: 575653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576567:-1
position: 576567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:575653-576567:-1:exon

VA249_RS02665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: rdgC
locus tag: VA249_RS02665
old locus tag: VYA_05150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011078567.1
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombination-associated protein RdgC
translation: MWFKNLLVYRVNREVNFNAEQLETQLAEFRFTPCGSQDKQKFGWVSAMGRHGDMMTHVSENRILICAKKEEKMLPASVIKESLNAKVDAMEAQEGRPLKKKEKDNLKDDIVMDLLPRAFSRSSHTYVLIMPKEGFILVDASSYKKAEDVLALLRKTMGSLPVVPAIPEVAIETTLTEWVKTGNTPQGISMMDEAELKSVLEEGGVIRCKKQELTTDEIRNHIAADKVVTKLALNWQDRIEFIMAEDSGIKRLKFSDELKDQNDDIPREDQAARFDADFSLMCGEFSAFLPNLYDALGGLPNPNA
SIO_010081: VA249_RS02665
subclass of: SO_0000673
so part of: VA249_RS02665
location: complement(575653..576567)
location: region:575653-576567:-1
so has part: feature:575653-576567:-1:exon

WP_221068767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:575653-576567:-1:exon

VA249_RS02670
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: phoB
locus tag: VA249_RS02670
old locus tag: VYA_05160
so part of: sequence
location: 576791..577480
location: region:576791-577480:1
so has part: feature:576791-577480:1:exon
subclass of: SO_0000010

position:576791:1
position: 576791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577480:1
position: 577480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576791-577480:1:exon

VA249_RS02670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: phoB
locus tag: VA249_RS02670
old locus tag: VYA_05160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000091118.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
GO process: GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphate regulon transcriptional regulator PhoB
translation: MSRRILVVEDEAPIREMLCFVLEQKGYQAVEAEDYDTAVTKLAEPFPDLVLLDWMLPGGSGINFIKHMKREELTRNIPVVMLTARGEEEDKVRGLEVGADDYITKPFSPKELVARLKAVIRRVTPTALEDVIDVQGLKLDPVSHRVTANDEPVDMGPTEFKMLHFFMTHQERVYSREQLLNNVWGTNVYVEDRTVDVHIRRLRKALEAADHDKLIQTVRGAGYRFSTKA
SIO_010081: VA249_RS02670
subclass of: SO_0000673
so part of: VA249_RS02670
location: 576791..577480
location: region:576791-577480:1
so has part: feature:576791-577480:1:exon

WP_128811575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:576791-577480:1:exon

VA249_RS02675
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: phoR
locus tag: VA249_RS02675
old locus tag: VYA_05170
so part of: sequence
location: 577521..578822
location: region:577521-578822:1
so has part: feature:577521-578822:1:exon
subclass of: SO_0000010

position:577521:1
position: 577521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578822:1
position: 578822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577521-578822:1:exon

VA249_RS02675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: phoR
locus tag: VA249_RS02675
old locus tag: VYA_05170
EC number: 2.7.13.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014205666.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphate regulon sensor histidine kinase PhoR
translation: MVERLTWKKLAWELAFFYTPWVIIGWIFGYMPWLLLAATALQLVWHLHNQVRLSAWLWDEKRLTPPSGSGNWESLFNGLYRLQQRQRRKRKELTNLIRRFRNGAESLPDAVVVFRAEGNIVWCNKLAQHLLGFHWPEDSGQPISNLIRTPDFIKYISKQDFSEPLEMRSPLNVERMLELRIVPYTEGEHLMVVRDVSQLKQLEGMRRNFFANVSHELRTPMTVLQGYLEMTEDPDMIVGPMWTKAHGVMTEQLNRMNSLVNQLLTLSKIEAAPMHELEDEVNVPSMLEILEKEANSLSGDDQHQLTFDVDSTLHVLGDDDQLRSAISNLVYNAVKYTPPGAHINVRWYQTAQGACLEVEDSGDGIEPQHLHRLTERFYRVDKARSRDTGGSGLGLAIVKHALSHHDSHLDIHSEVGVGSKFSFVLPSRLVVKK
SIO_010081: VA249_RS02675
subclass of: SO_0000673
so part of: VA249_RS02675
location: 577521..578822
location: region:577521-578822:1
so has part: feature:577521-578822:1:exon

WP_221068769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:577521-578822:1:exon

VA249_RS02680
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02680
old locus tag: VYA_05180
so part of: sequence
location: 578819..579787
location: region:578819-579787:1
so has part: feature:578819-579787:1:exon
subclass of: SO_0000010

position:578819:1
position: 578819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579787:1
position: 579787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578819-579787:1:exon

VA249_RS02680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02680
old locus tag: VYA_05180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005534108.1
GO function: GO:0042301 - phosphate ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphate ABC transporter substrate-binding protein PstS family protein
translation: MSAVSMRFKSVMLATLLCSSAALAQDTKPLPNYQKTTGIAGNLLSVGSDTLAGMTTLWVEEFKSIYPNINAQVQASGSSTAPPALTEQTAQFGPMSRSMRLREIEAFERVHGYKPTALRVAIDAIGIFVHQDNPIEGLNFNQLDAMFSATLRCGESEFITNWRQLGIKTEWAKRNLQLFGRNSVSGTYGYFKSNALCGGDFKTRVNEQPGSASVVQSVASTISGVGYSGVGYRVAGVRLVPIAKSGEHYISPTRKNIVTGKYPLSRYLYVYINKHPDYPLSPIESEFIRFIFSSQGQALVAKDGYVPITADLAAYELKKVGL
SIO_010081: VA249_RS02680
subclass of: SO_0000673
so part of: VA249_RS02680
location: 578819..579787
location: region:578819-579787:1
so has part: feature:578819-579787:1:exon

WP_221068771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:578819-579787:1:exon

VA249_RS02685
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: ppx
locus tag: VA249_RS02685
old locus tag: VYA_05200
pseudo: true
so part of: sequence
location: complement(579803..581307)
location: region:579803-581307:-1
so has part: feature:579803-581307:-1:exon
subclass of: SO_0000010

position:579803:-1
position: 579803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581307:-1
position: 581307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579803-581307:-1:exon

VA249_RS02685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: ppx
locus tag: VA249_RS02685
old locus tag: VYA_05200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009705556.1
GO function: GO:0004309 - exopolyphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO process: GO:0006798 - polyphosphate catabolic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: exopolyphosphatase
SIO_010081: VA249_RS02685
subclass of: SO_0000673
so part of: VA249_RS02685
location: complement(579803..581307)
location: region:579803-581307:-1
so has part: feature:579803-581307:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:579803-581307:-1:exon

VA249_RS02690
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: ppk1
locus tag: VA249_RS02690
old locus tag: VYA_05210
so part of: sequence
location: complement(581291..583381)
location: region:581291-583381:-1
so has part: feature:581291-583381:-1:exon
subclass of: SO_0000010

position:581291:-1
position: 581291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583381:-1
position: 583381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581291-583381:-1:exon

VA249_RS02690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: ppk1
locus tag: VA249_RS02690
old locus tag: VYA_05210
EC number: 2.7.4.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005445285.1
GO component: GO:0009358 - polyphosphate kinase complex [Evidence IEA]
GO function: GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO process: GO:0006799 - polyphosphate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyphosphate kinase 1
translation: MSSEKLYIEKELSWLSFNERVLQEAADKTVPLIERIRFLGIFSNNLDEFYKVRFADVKRRILINQERGVTDNSKHLLSKMQTKALKLNEQFDELYGDLIREMARRRIFLVNEAQLDDAQKRWITKYFRNDVMPHITPLLMKDDIDVLQFLKDEYAYIAVDLKKGEQSQYALIEIPTDHLPRFVMVPEQKGKRRKTIILLDNIIRYCLDELFKGFFDYDELNGYAMKMTRDADYDLRQEIEYSLLEQMSEGVSQRLTAMPVRFVYERDMPQEMLDFLCNKLKISHYDSLIPGSRYHNFKDFIGFPNVGRDYLENKPLPPMKCADFEGYPNSFDAIRAKDILLYYPYHTFDHISELVRQASFDPKVLSIKINIYRVAKDSRLMHSLIDAVHNGKNVTVVVELQARFDEEANIEWSKVLTDAGVHVVFGAPGLKIHSKLLLISRREDGDIIRYAHIGTGNFHEKTARIYTDFALLTADQDITNEVRNVFGYIENPYRPVRFEHLIVSPRNSRKRIYRLIDTEIANARIGKKASLTIKVNNLVDKGIVNKLYGASNAGVKINMIIRGMCSLVPGIDGVSENIRIISIVDRFLEHPRVVITHNDGDPQVYISSADWMTRNIDHRIEVTAPVRDPRLKQRIIDIINIHFTDTVKARLIDKEMSNTYIPRGNRKKVRSQIAIYDYLKNIEKQVRKQKHDASET
SIO_010081: VA249_RS02690
subclass of: SO_0000673
so part of: VA249_RS02690
location: complement(581291..583381)
location: region:581291-583381:-1
so has part: feature:581291-583381:-1:exon

WP_221068773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:581291-583381:-1:exon

VA249_RS02695
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02695
old locus tag: VYA_05220
so part of: sequence
location: 583589..585793
location: region:583589-585793:1
so has part: feature:583589-585793:1:exon
subclass of: SO_0000010

position:583589:1
position: 583589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585793:1
position: 585793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583589-585793:1:exon

VA249_RS02695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02695
old locus tag: VYA_05220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017818879.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease subunit
translation: MAQAEFSLQEKDKKRLFKDRLVRFAVTSGGIGVLAALVLIFVYLAMVIIPLFSDAEIETNYASRATYFGKPLAISVDDYSQIAFELTSDGQLRFLSLDDPNKPALYEQQVAKNPVAFSHSAPGLGWYGLVDGNGQAHIFKPEFNATLRENTRPPEIIDLQSSMNMQLTDKHDPVTLFAFSANMDALTLVWQTQSGLLKARWQEMQGLGMSPTVVEFAFSSAFDKPEQMLLTPDGQTLYLRAGSELIVLVKQSDKFAVREVVDLTEGDQKHSVRTMDLLAGAYSLLVTHNDGKVSQWFDTLQGDQRKLTHIRDFKLASEVKYLLPDSHRKGFYSFYTNGTLQSHYTTSEKLVLFERAFHQAPAIAAMSNNERYLITWQNNELSVTEVDNPYPEISLSSLWQKVWYEGYPEPEFVWQSTSASDNFEAKFSLVPIAFGTIKAAMFAMLFSVPLAVLGAIYTAYFMSPRMRRVVKPSIELMEALPTVIIGFLAGLWFAPIVEDHLITVVVLLFVLPLSTMVIGALWALLPQRLRNQLPNGWHALVLMPVLLLLIVLGIWVSPTLEQHFFGGDIRLFLTDHGIGFDQRNALVVGLAMGFAVIPTIFTIAEDAIFSVPKHLSDGSLALGATPWQTLIYVVLLTASPGIFSAIMMGLGRAVGETMIVLMATGNTPLMDWNILEGLRSLSATIAVELPESEVGSSHYRLLFLSALILFVFTFAVNALAEWVRQRLRDKYRAL
SIO_010081: VA249_RS02695
subclass of: SO_0000673
so part of: VA249_RS02695
location: 583589..585793
location: region:583589-585793:1
so has part: feature:583589-585793:1:exon

WP_221068775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:583589-585793:1:exon

VA249_RS02700
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: pstA
locus tag: VA249_RS02700
old locus tag: VYA_05230
so part of: sequence
location: 585821..587494
location: region:585821-587494:1
so has part: feature:585821-587494:1:exon
subclass of: SO_0000010

position:585821:1
position: 585821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587494:1
position: 587494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585821-587494:1:exon

VA249_RS02700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: pstA
locus tag: VA249_RS02700
old locus tag: VYA_05230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017633926.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphate ABC transporter permease PstA
translation: MLNWIRSGAPWIWLTGGAVSISLLSVLGLLLLIGWKGLTYFWPAPLYQWNVAALTPVQGEVLDKNSILVGQIYERSFVPKSYLPEDARNKLADDEEFATRLNIKIANRELYPADFISVLKMQLDEPTTPSEWVVIERSSGGYFFGKIVAFQDGQTRYENNIQDLLNNKLEDAERLRREIDMLVDDQVKDLGWQLEQLRLAKRKHELNNTITDEFLADNSKQKNALEQELAELDVQLDGLRLGMSDYALIVEDMMGKQVGIPLKDILDYWYPNSMSLPEKVAHWGKQVWKFLSEDPRESNSEGGVFPAIFGTVFLVIIMSIIVMPLGVVAAIYLHEYAKNNALTRIIRIAVINLAGVPSIVYGVFGLGFFVYTIGASIDNVFYAERLPAPTFGTPGLLWSALTLAVLTLPVVIVTTEEGLTRIPNSVRHGSLALGATQFETLWRVVLPMATPAIITGLILAIARAAGEVAPLMLVGVVKLASSLPVDGQFPYVHLERKFMHLGFHIYDVGFQTSNIEAARPLVYATSFLLVTVIVGLNLTAISIRNNLREKYRTLGQD
SIO_010081: VA249_RS02700
subclass of: SO_0000673
so part of: VA249_RS02700
location: 585821..587494
location: region:585821-587494:1
so has part: feature:585821-587494:1:exon

WP_221068777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:585821-587494:1:exon

VA249_RS02705
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: pstB
locus tag: VA249_RS02705
old locus tag: VYA_05240
so part of: sequence
location: 587497..588315
location: region:587497-588315:1
so has part: feature:587497-588315:1:exon
subclass of: SO_0000010

position:587497:1
position: 587497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588315:1
position: 588315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587497-588315:1:exon

VA249_RS02705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: pstB
locus tag: VA249_RS02705
old locus tag: VYA_05240
EC number: 7.3.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019274140.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphate ABC transporter ATP-binding protein PstB
translation: MFNFDNTLGYEPPLDVHNLTDEQTAISIENLNLFYGQAQALHDISMRIPRGRVTAFIGPSGCGKSTLLRCINRMNDLVEGCKVTGKVRLHGKNVYDPSVDVATLRRRVGMVFQRPNPFPKSIYENVVYGLRLQGVKNRRSLDDAVERSLRSAALWDEVKDRLHENAFGLSGGQQQRLVIARAVAIEPEVLLLDEPTSALDPISTLTIEELINELKTQYTVVIVTHNMQQAARVSDHTAFIHMGKLIEYSDADSIFTSPMKKKTEDYITGRYG
SIO_010081: VA249_RS02705
subclass of: SO_0000673
so part of: VA249_RS02705
location: 587497..588315
location: region:587497-588315:1
so has part: feature:587497-588315:1:exon

WP_211919937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:587497-588315:1:exon

VA249_RS02710
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: phoU
locus tag: VA249_RS02710
old locus tag: VYA_05250
so part of: sequence
location: 588341..589039
location: region:588341-589039:1
so has part: feature:588341-589039:1:exon
subclass of: SO_0000010

position:588341:1
position: 588341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589039:1
position: 589039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588341-589039:1:exon

VA249_RS02710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: phoU
locus tag: VA249_RS02710
old locus tag: VYA_05250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017419966.1
GO process: GO:0030643 - cellular phosphate ion homeostasis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphate signaling complex protein PhoU
translation: MHFGRHISGQFNVELESIRTHVLTMGGLVEQQLSYAIQALNKEDVELARKVVRDDHKVNAMEVSIDDACTRIIAKRQPTAKDLRLIMAIIKTITDLERIGDVATRIARVAIESPSSKERQFQVSLEPLCRQAIQMLHQVLDAFARMDVEAAAEVHKLDDKLDAEYEAVVRQLMTYMMEDPKNIPHILQVMWSARAIERVGDRCQNICEYIIYFVKGKDVRHLGDQSIDDALK
SIO_010081: VA249_RS02710
subclass of: SO_0000673
so part of: VA249_RS02710
location: 588341..589039
location: region:588341-589039:1
so has part: feature:588341-589039:1:exon

WP_128811569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:588341-589039:1:exon

VA249_RS02715
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02715
old locus tag: VYA_05260
so part of: sequence
location: complement(589176..589814)
location: region:589176-589814:-1
so has part: feature:589176-589814:-1:exon
subclass of: SO_0000010

position:589176:-1
position: 589176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589814:-1
position: 589814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589176-589814:-1:exon

VA249_RS02715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02715
old locus tag: VYA_05260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005440345.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YadA C-terminal domain-containing protein
translation: MTHNIAKLTAACTLLASFSSFAAVIPDRPDPGTPTNPIQGVPEQPVLPEIDNGVPGVPDRPHPDQSPTPPIEAAPEQPTLPEKDNGIPNIPDRPTPQLPSNPIENNPTDDRLNHLENLAREYDYRLNEQAEQMDGIRASLHAVTNARPYATNGELAIGAGVGFAGSKEAVAVGGAYGLTDQVSLSGTFHYESSGKYSSSEVAGGVGVQFTFK
SIO_010081: VA249_RS02715
subclass of: SO_0000673
so part of: VA249_RS02715
location: complement(589176..589814)
location: region:589176-589814:-1
so has part: feature:589176-589814:-1:exon

WP_221068779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:589176-589814:-1:exon

VA249_RS02720
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02720
old locus tag: VYA_05270
so part of: sequence
location: complement(589954..590883)
location: region:589954-590883:-1
so has part: feature:589954-590883:-1:exon
subclass of: SO_0000010

position:589954:-1
position: 589954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590883:-1
position: 590883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589954-590883:-1:exon

VA249_RS02720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02720
old locus tag: VYA_05270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016797169.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MAKDLFYTLDLNLIKTFMVLMQERNMRKASLRLFVSQPAISQALQKLRNHFDDELFVKVKTGLEPTPFAELLANDITPHIDGLAGAINRSHQFDPAEVNNKIRIALAPITMTCLPGFLFKQLQTLAPNAQLELVSWSNSTIEEILKGETLFGVNYELILSNKEIYTPKLLDLKGRIIVRSGHPITKPHVEPEDLAGYPIASLISPGWNDKFSYASELLTKMGIEHTIGFRSEMVTAILDVVKQTDMYFPHSDLFPIEQFPGLRAIDVTINGQYQLKSVHSHMHVRNRNNPLINWLTDLIQQGLKQQGDK
SIO_010081: VA249_RS02720
subclass of: SO_0000673
so part of: VA249_RS02720
location: complement(589954..590883)
location: region:589954-590883:-1
so has part: feature:589954-590883:-1:exon

WP_221068780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:589954-590883:-1:exon

VA249_RS02725
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: ppk2
locus tag: VA249_RS02725
old locus tag: VYA_05280
so part of: sequence
location: complement(590893..591669)
location: region:590893-591669:-1
so has part: feature:590893-591669:-1:exon
subclass of: SO_0000010

position:590893:-1
position: 590893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591669:-1
position: 591669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590893-591669:-1:exon

VA249_RS02725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: ppk2
locus tag: VA249_RS02725
old locus tag: VYA_05280
EC number: 2.7.4.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005534115.1
GO component: GO:0005575 - cellular_component [Evidence IEA]
GO function: GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO process: GO:0006793 - phosphorus metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyphosphate kinase 2
translation: MAKLRKKEYEDALEQLQIELVKLQEWVKHKGLKVVVLFEGRDAAGKGGVIKRITEKLNPRVCRIAALPAPTEKEKTQWYFQRYVAHLPAAGEIVLFDRSWYNRAGVEKVMGFCTPDQYEEFLRSCPEFERMLQRSGIILIKYWFSVSDEEQEKRFLERINTPIKRWKFSPMDLESRNRWAEYSEAKDKMFAYTDTKNCPWWVVPSDDKKKARLNCISHLLSHIEYQEIEYPQIALPELNKDGYIRAPIEDQTFVPDKY
SIO_010081: VA249_RS02725
subclass of: SO_0000673
so part of: VA249_RS02725
location: complement(590893..591669)
location: region:590893-591669:-1
so has part: feature:590893-591669:-1:exon

WP_221068782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:590893-591669:-1:exon

VA249_RS02730
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02730
old locus tag: VYA_05290
so part of: sequence
location: complement(591738..592481)
location: region:591738-592481:-1
so has part: feature:591738-592481:-1:exon
subclass of: SO_0000010

position:591738:-1
position: 591738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592481:-1
position: 592481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591738-592481:-1:exon

VA249_RS02730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02730
old locus tag: VYA_05290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017448854.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper homeostasis protein CutC
translation: MNTQLEVCIDNIESLHNAIAGGATRIELCSSLALGGLTPSYGFMQQAAKLSSVPVYAMIRPRQGDFFYSEEEIEMMRWDIEAAHHAGLNGIVLGVLTQDGDIHMPYATALCEFAQALGLGVTFHRAFDQCRDAETALEEIISLGCERILTSGLAASAPQGIDVLTVLVAKAKGRIAIMAGAGINADNVNHLVEQTQVTEVHLSGKTTRPSHMTFTSGQSKMGAADIDDFVIPITSQEAIANMVTALK
SIO_010081: VA249_RS02730
subclass of: SO_0000673
so part of: VA249_RS02730
location: complement(591738..592481)
location: region:591738-592481:-1
so has part: feature:591738-592481:-1:exon

WP_221068784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:591738-592481:-1:exon

VA249_RS02735
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02735
old locus tag: VYA_05300
so part of: sequence
location: complement(592756..593364)
location: region:592756-593364:-1
so has part: feature:592756-593364:-1:exon
subclass of: SO_0000010

position:592756:-1
position: 592756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593364:-1
position: 593364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:592756-593364:-1:exon

VA249_RS02735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02735
old locus tag: VYA_05300
EC number: 1.11.1.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012533760.1
GO function: GO:0051920 - peroxiredoxin activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peroxiredoxin C
translation: MVLVGRQAPDFTAAAVLGNGEIIENFNFAEFTKGKKAVVFFYPLDFTFVCPSELIAFDNRFEDFQAKGVEVIGVSIDSQFSHNAWRNTPVENGGIGQVKYPLIADVKHEICKAYDVEHPEAGVAFRGSFLIDEDGLVRHQVVNDLPLGRNIDEMLRMVDALNFHQKHGEVCPAQWEEGKAGMDASPKGVAAFLSEHADDLSK
SIO_010081: VA249_RS02735
subclass of: SO_0000673
so part of: VA249_RS02735
location: complement(592756..593364)
location: region:592756-593364:-1
so has part: feature:592756-593364:-1:exon

WP_128811563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:592756-593364:-1:exon

VA249_RS02740
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02740
old locus tag: VYA_05310
so part of: sequence
location: 593564..594469
location: region:593564-594469:1
so has part: feature:593564-594469:1:exon
subclass of: SO_0000010

position:593564:1
position: 593564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594469:1
position: 594469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593564-594469:1:exon

VA249_RS02740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02740
old locus tag: VYA_05310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017101069.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydrogen peroxide-inducible genes activator
translation: MNKWPSLKQLHYLVTLHETRHFSDAAERCFVSQSTLSKGIQNLEELIGCPLYEKKDKKSPLVFTQAGELVVQQGRELLAKGQDLVELGRLCQGDDMEGQLKVGCIPTIAPFLLCDLVQEVNYRFPQLNLLLREDTTTNLLQALRHGELDVLILALPVEIDGMESRVVGQDPFRMVISANQADSVPVPIRYADLPNESVFLLEKEHCLTEHAVSACKLTDKEKINPFTATSLHTLVQMVANGLGTTFIPQMAIDHGLLHNQNLVVIDPPGQQAYRNIGLVWRPSSSRSNTFNQLADLVSELL
SIO_010081: VA249_RS02740
subclass of: SO_0000673
so part of: VA249_RS02740
location: 593564..594469
location: region:593564-594469:1
so has part: feature:593564-594469:1:exon

WP_221068785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:593564-594469:1:exon

VA249_RS02745
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: aceB
locus tag: VA249_RS02745
old locus tag: VYA_05320
so part of: sequence
location: 595076..596704
location: region:595076-596704:1
so has part: feature:595076-596704:1:exon
subclass of: SO_0000010

position:595076:1
position: 595076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596704:1
position: 596704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595076-596704:1:exon

VA249_RS02745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: aceB
locus tag: VA249_RS02745
old locus tag: VYA_05320
EC number: 2.3.3.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005534119.1
GO function: GO:0004474 - malate synthase activity [Evidence IEA]
GO process: GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: malate synthase A
translation: MLAQTEQKTQQLKQTQGMLEVNGVVAPEHQAIFPVEAQTFLSLLCEKFAGRVEQLLEAREEKQACIDAGELPDFLAETQDIREGSWKILGIPQDLQDRRVEITGPTDRKMVINALNANVKVFMADFEDSMSPAWSKVLDGQINLRDAVNGTISYTNPGNGKHYQLEEDPAVLICRVRGLHLKEKHVTWHGQIIPGALFDFALYFYNNYKALLKKGSGPYFYIPKLQSHHEAKWWSEVFHFTEEYFGLDTGTIKATVLIETLPAVFEMDEILFSLKEHIVGLNCGRWDYIFSYIKTLKNHPDRVLPDRQVVTMDKPFLNAYSRLLVRTCHKRGAFAMGGMAAFIPAKDPQENQKVLDKIHNDKSLEANNGHDGTWVAHPGLADTAMEVFSATLGLRTNQLDVSRSEDAPITAAELLEPCEGERSEEGMRHNIRVALQYIEAWISGNGCVPIYGLMEDAATAEISRASIWQWIQHGKSLDNGLKVTKELFELYLKEEIEIVKQEIGEQRYQAGRFEEAADLMARLTTSDELTNFLTIPGYDYLD
SIO_010081: VA249_RS02745
subclass of: SO_0000673
so part of: VA249_RS02745
location: 595076..596704
location: region:595076-596704:1
so has part: feature:595076-596704:1:exon

WP_221068788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:595076-596704:1:exon

VA249_RS02750
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: aceA
locus tag: VA249_RS02750
old locus tag: VYA_05330
so part of: sequence
location: 596852..598165
location: region:596852-598165:1
so has part: feature:596852-598165:1:exon
subclass of: SO_0000010

position:596852:1
position: 596852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598165:1
position: 598165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596852-598165:1:exon

VA249_RS02750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: aceA
locus tag: VA249_RS02750
old locus tag: VYA_05330
EC number: 4.1.3.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004747909.1
GO function: GO:0004451 - isocitrate lyase activity [Evidence IEA]
GO process: GO:0019752 - carboxylic acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isocitrate lyase
translation: MTNLTRRQQIEALEKDWATNPRWKNVKRTYTAEEVVELRGSMVPANTIAQRGADKLWSLVNGSSKKGYVNCLGALTGGQAVQQAKAGIEAIYLSGWQVAADNNTASTMYPDQSLYPVDSVPSVVKRINNSFRRADQIQWSAGKSPEDEGGIDYFLPIVADAEAGFGGVLNAYELMKSMIDAGAAGVHFEDQLASVKKCGHMGGKVLVPTQEAVQKLVAARLAADVAGTTTLVIARTDANAADLLTSDCDPYDKDFIQGERTPEGFYRVRAGIDQAISRGLAYAPYADLIWCETATPCLEEARKFAEAIHAEYPDQLLAYNCSPSFNWEKNLDAETIAKFQQELADMGYKYQFITLAGIHNMWFNMFELAHAYAQGEGMRHYVEKVQRPEFEAAEKGYTFVAHQQEVGTGYFDRMTNTIQGGNSSVTALTGSTEEDQF
SIO_010081: VA249_RS02750
subclass of: SO_0000673
so part of: VA249_RS02750
location: 596852..598165
location: region:596852-598165:1
so has part: feature:596852-598165:1:exon

WP_211919929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:596852-598165:1:exon

VA249_RS02755
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02755
old locus tag: VYA_05340
so part of: sequence
location: complement(598351..598800)
location: region:598351-598800:-1
so has part: feature:598351-598800:-1:exon
subclass of: SO_0000010

position:598351:-1
position: 598351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598800:-1
position: 598800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598351-598800:-1:exon

VA249_RS02755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02755
old locus tag: VYA_05340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005391583.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CBS domain-containing protein
translation: MIKVEDMMTRNPHTLLSTNTLRDAQSMMEALDIRHIPVVDTNKHLQGLVTHRDILAAKESSLHTDKDEFSFTLDAPLKDVMHTNIMTAEPRAGLKESAIYMQKHKVGCLPVVSKGNLVGIITDTDFVTIAINLLELQEEVEPEEIEPNE
SIO_010081: VA249_RS02755
subclass of: SO_0000673
so part of: VA249_RS02755
location: complement(598351..598800)
location: region:598351-598800:-1
so has part: feature:598351-598800:-1:exon

WP_221068790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:598351-598800:-1:exon

VA249_RS02760
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
locus tag: VA249_RS02760
old locus tag: VYA_05350
so part of: sequence
location: complement(599056..599277)
location: region:599056-599277:-1
so has part: feature:599056-599277:-1:exon
subclass of: SO_0000010

position:599056:-1
position: 599056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599277:-1
position: 599277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599056-599277:-1:exon

VA249_RS02760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
locus tag: VA249_RS02760
old locus tag: VYA_05350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020194980.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKMLITLFSAAVISFSANTLASSEQETLKALQDACKLKQVPRLCAVNLPNKNFIGRCVDAKAYGLICVHFRQS
SIO_010081: VA249_RS02760
subclass of: SO_0000673
so part of: VA249_RS02760
location: complement(599056..599277)
location: region:599056-599277:-1
so has part: feature:599056-599277:-1:exon

WP_221068792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:599056-599277:-1:exon

VA249_RS02765
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: queA
locus tag: VA249_RS02765
old locus tag: VYA_05360
so part of: sequence
location: 599568..600620
location: region:599568-600620:1
so has part: feature:599568-600620:1:exon
subclass of: SO_0000010

position:599568:1
position: 599568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600620:1
position: 600620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599568-600620:1:exon

VA249_RS02765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: queA
locus tag: VA249_RS02765
old locus tag: VYA_05360
EC number: 2.4.99.17
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019274129.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0051075 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity [Evidence IEA]
GO process: GO:0008616 - queuosine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
translation: MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTGELVDGTFTDVLDHIQAGDLVVFNNTRVIPARMFGRKESGGKLEVLVERMLDEKSILAHVRCSKSPKPGSTVIVGENDEYSAEMVARHDALFELKFNSDKTVLEILEEIGHMPLPPYIDRPDEDADKERYQTVYNQKPGAVAAPTAGLHFDDVLLDKIKAKGAEFAYVTLHVGAGTFQPVKVDNINDHHMHAEYVEVPQEVVDAVTATKARGGRVIAVGTTSVRSLESAAQDALKKGTELVPFFGDTEIFIFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENHYRFFSYGDSMFIKKKTN
SIO_010081: VA249_RS02765
subclass of: SO_0000673
so part of: VA249_RS02765
location: 599568..600620
location: region:599568-600620:1
so has part: feature:599568-600620:1:exon

WP_211919926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:599568-600620:1:exon

VA249_RS02770
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: tgt
locus tag: VA249_RS02770
old locus tag: VYA_05370
so part of: sequence
location: 600863..601996
location: region:600863-601996:1
so has part: feature:600863-601996:1:exon
subclass of: SO_0000010

position:600863:1
position: 600863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601996:1
position: 601996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600863-601996:1:exon

VA249_RS02770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: tgt
locus tag: VA249_RS02770
old locus tag: VYA_05370
EC number: 2.4.2.29
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014230923.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA guanosine(34) transglycosylase Tgt
translation: MKLKFDLKKKNGNARRGQLTFERGTVQTPAFMPVGTYGTVKGMTPEEVKGTGAEILLGNTFHLWLRPGQEVMKMHGDLHDFMNWHGPILTDSGGFQVFSLGKMRTITEQGVHFRNPVNGDKIFMDAEKSMEIQKDLGSDIVMIFDECTPYPATHDEAKKSMEMSLRWAQRSRDHFDKLENPNNLFGIVQGGVYEDLRDVSVKGLTEIGFDGYAVGGLAVGEPKEDMHRILEHTCPQLPEDKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFVTGGVIKIRNAKHKTDTTPLDPHCDCYTCQNYSKSYLHHLERCNEILGARLNTIHNLRYYQRLMESIRKAIDEDRFDEFVQEFYARRDREVPPLGEA
SIO_010081: VA249_RS02770
subclass of: SO_0000673
so part of: VA249_RS02770
location: 600863..601996
location: region:600863-601996:1
so has part: feature:600863-601996:1:exon

WP_128811556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:600863-601996:1:exon

VA249_RS02775
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: yajC
locus tag: VA249_RS02775
old locus tag: VYA_05380
so part of: sequence
location: 602162..602491
location: region:602162-602491:1
so has part: feature:602162-602491:1:exon
subclass of: SO_0000010

position:602162:1
position: 602162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602491:1
position: 602491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602162-602491:1:exon

VA249_RS02775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1074311
gene: yajC
locus tag: VA249_RS02775
old locus tag: VYA_05380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019822095.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit YajC
translation: MFISQAHAAAEGAPAGGGFEMLIMLGMFAVIFYFMIYRPQAKRVKEHKSLMASMGKGDEVLTSGGLVGKITKIAEDNDYISIELNANNEVVIKKDFITAVLPKGTLKSL
SIO_010081: VA249_RS02775
subclass of: SO_0000673
so part of: VA249_RS02775
location: 602162..602491
location: region:602162-602491:1
so has part: feature:602162-602491:1:exon

WP_098416397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:602162-602491:1:exon

VA249_RS02780
type: Gene
subclass of: SO_0000704
RO_0002162: 1074311
gene: secD
locus tag: VA249_RS02780
old locus tag: VYA_05390
so part of: sequence
location: 602513..604369
location: region:602513-604369:1
so has part: feature:602513-604369:1:exon
subclass of: SO_0000010

position:602513:1
position: 602513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604369:1
position: 604369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602513-604369:1:exon