Caballeronia grimmiae strain Lep1A1 plasmid p4, complete sequence.
type: Entry
definition: Caballeronia grimmiae strain Lep1A1 plasmid p4, complete sequence.
sequence version: NZ_CP084277.1
sequence date: 2023-04-27
sequence: sequence
division: CON
label: NZ_CP084277.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN21547026
keyword: RefSeq
source: Caballeronia grimmiae
organism: Caballeronia grimmiae
taxonomy: Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Caballeronia.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP084277.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 2020\nAssembly Method :: SPAdes v. 3.13.0; Unicycler v. 2.4.8-beta\nAssembly Name :: Lep1A1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 60x\nSequencing Technology :: Illumina HiSeq; Oxford Nanopore MinION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/27/2023 07:33:05\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,237\nCDSs (total) :: 6,157\nGenes (coding) :: 5,985\nCDSs (with protein) :: 5,985\nGenes (RNA) :: 80\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 61\nncRNAs :: 4\nPseudo Genes (total) :: 172\nCDSs (without protein) :: 172\nPseudo Genes (ambiguous residues) :: 0 of 172\nPseudo Genes (frameshifted) :: 85 of 172\nPseudo Genes (incomplete) :: 110 of 172\nPseudo Genes (internal stop) :: 35 of 172\nPseudo Genes (multiple problems) :: 47 of 172\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 131480
topology: circular
so has quality: SO_0000988
location: 1..131480
location: region:1-131480:1
RO_0002162: 1071679

NZ_CP084277
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN21547026
type: BioSample
SIO_000068: biosample

1
title: Prevalence and functional effects of a genomic island for insect symbiosis within Burkholderiaceae
author: Stillson, P.T.
author: Baltrus, D.A.
author: Ravenscraft, A.
journal: Unpublished

2
title: Direct Submission
author: Stillson, P.T.
author: Baltrus, D.A.
author: Ravenscraft, A.
journal: Submitted (22-SEP-2021) Biology Department, University of Texas at Arlington, 501 S. Nedderman Dr., Arlington, TX 76019, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131480:1
position: 131480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-131480:1:source
so part of: sequence
organism: Caballeronia grimmiae
mol type: genomic DNA
strain: Lep1A1
host: Leptoglossus zonatus
plasmid: p4
country: USA: California
collection date: 2018
collected by: A. Ravenscraft

1071679
type: Taxonomy
SIO_000068: taxonomy

LDZ21_RS30250
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30250
so part of: sequence
location: complement(join(131177..131480,1..59))
location: region:1-131480:-1
so has part: feature:1-59:-1:exon
so has part: feature:131177-131480:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131480:-1
position: 131480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-59:-1:exon

position:59:-1
position: 59
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:131177-131480:-1:exon

position:131177:-1
position: 131177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LDZ21_RS30250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30250
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVIKRERAVKIERALPADLWRKLRAELDARSTEADAMQWRAVRAAILLMGDSGLRREEAAIARRENLNPSFYGTLDRPVWELTVVGKGQRERTVPVSAATLEALRALGGSREGIRRGRRG
SIO_010081: LDZ21_RS30250
subclass of: SO_0000673
so part of: LDZ21_RS30250
location: complement(join(131177..131480,1..59))
location: region:1-131480:-1
so has part: feature:1-59:-1:exon
so has part: feature:131177-131480:-1:exon

WP_244798040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-59:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131177-131480:-1:exon

LDZ21_RS30255
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30255
so part of: sequence
location: complement(160..1290)
location: region:160-1290:-1
so has part: feature:160-1290:-1:exon
subclass of: SO_0000010

position:160:-1
position: 160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1290:-1
position: 1290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160-1290:-1:exon

LDZ21_RS30255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30255
inference: COORDINATES: protein motif:HMM:NF023898.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage integrase family protein
translation: MHERAAASPQTLTAAASRPPEKLTAETRASEKRTQERLTLERGYTSKDFTALRAYVQRIPPAVIARTYYDPDEDAHAATPGAMERHLTTMLDALVALALAHGSTALADHLRASMRQHGRPLLTAVTFRMVTEAAHLAALPPRADHPIGAWLRPRVARRLKGEGIGTLGELVAFCNRRGGSWWRSIPRIGPGRARDRKLITQAAGIAATTIDVDVDYKEQDGIPLIAPELVEVAPAAKVTESGPAGGREPAGRLTLAPLERLAVPHALSGAHGENRATAFCYIQANHDLDAVRAYLNRYRDQPKTVRAYTKELERFLLGAVVLRGKALSDLRVDDSEAYKDFLKSPRSAFRRRALPAAVAALATVCRVGGWLGFAIA
SIO_010081: LDZ21_RS30255
subclass of: SO_0000673
so part of: LDZ21_RS30255
location: complement(160..1290)
location: region:160-1290:-1
so has part: feature:160-1290:-1:exon

WP_244798041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160-1290:-1:exon

LDZ21_RS30260
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30260
so part of: sequence
location: complement(1283..1918)
location: region:1283-1918:-1
so has part: feature:1283-1918:-1:exon
subclass of: SO_0000010

position:1283:-1
position: 1283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1918:-1
position: 1918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1283-1918:-1:exon

LDZ21_RS30260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008343731.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAQGFAPDDREPGDDAPNGSNDASSDASQASDRWPGTAPTAATAQVVLAVDEAITLKRRAAAAWLTAHGDAVPLLPVKPSRLELAVVIALAETYGAALTSLPRFIPVIDFIADYGAVKLVQRVMYGARPTTDFDVTAYAAENARFADLLREARTAFEFLCASWPEAFMAQASEALAQLGLPRLRTPAPPSMNGGSGGDEPGDGSGEEGDDA
SIO_010081: LDZ21_RS30260
subclass of: SO_0000673
so part of: LDZ21_RS30260
location: complement(1283..1918)
location: region:1283-1918:-1
so has part: feature:1283-1918:-1:exon

WP_244798042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1283-1918:-1:exon

LDZ21_RS30265
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30265
so part of: sequence
location: complement(2117..2905)
location: region:2117-2905:-1
so has part: feature:2117-2905:-1:exon
subclass of: SO_0000010

position:2117:-1
position: 2117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2905:-1
position: 2905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2117-2905:-1:exon

LDZ21_RS30265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30265
inference: COORDINATES: protein motif:HMM:NF021982.2
GO component: GO:0005576 - extracellular region [Evidence IEA]
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PHB depolymerase family esterase
translation: MVTLGEQSLPATCRIDLGSAGTSAPSRRSRRPPRIRARGIADRRIDGRARHSGETAALAALTNDVVARFNVDHARVYVAGLSAGGAMAINLAVTYPDLYAAAAIHSGMAFGVANEHLSALCAMNDGRGKICLPEREENAARARTVPLLVFHGDADDTVHPLNGEQIIEMSQLLESHAADTRVCTTTQIESEVGCHAYTRDVWRNQDGSLRAERWVVHGLGHAWSGGHPDGTYTDHRGPDATAAIVRFVSQFALDDAQDGQLM
SIO_010081: LDZ21_RS30265
subclass of: SO_0000673
so part of: LDZ21_RS30265
location: complement(2117..2905)
location: region:2117-2905:-1
so has part: feature:2117-2905:-1:exon

WP_244798043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2117-2905:-1:exon

LDZ21_RS30270
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30270
so part of: sequence
location: 3001..4176
location: region:3001-4176:1
so has part: feature:3001-4176:1:exon
subclass of: SO_0000010

position:3001:1
position: 3001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4176:1
position: 4176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3001-4176:1:exon

LDZ21_RS30270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016348557.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NYN domain-containing protein
translation: MAGPQESVNMALFCDFENVAIGVRDAKYERFDIRPVLERLLLKGSIVVKKAYCDWDRYKGFKASMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSDFSPLVSKLRENAKKVIGVGVKQSTSDLLVANCDEFIFYDDLVREQQRASAKQEAREAKRVSEQDRQPKEEIESRRSHAIAIAVETFEALCSERGESGKIWASVLKSAIKRRKPGFSETQYGFRAFGNLLEEAQQRGFLVVGRDDKSGAFVSRAYATSAKDTGQAAAPVILREHDKTDTGRPEETPEAALANGPETEVFVQSKQPEPLNKPKKAKASGQRRAKKITAIKSPLEQPDTQDDNQAVQGAIAEEKPAKPSRKSTSRSRASRKVVDSATDQ
SIO_010081: LDZ21_RS30270
subclass of: SO_0000673
so part of: LDZ21_RS30270
location: 3001..4176
location: region:3001-4176:1
so has part: feature:3001-4176:1:exon

WP_244798044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3001-4176:1:exon

LDZ21_RS30275
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30275
so part of: sequence
location: 4495..5744
location: region:4495-5744:1
so has part: feature:4495-5744:1:exon
subclass of: SO_0000010

position:4495:1
position: 4495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5744:1
position: 5744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4495-5744:1:exon

LDZ21_RS30275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611570.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MESIDKAKRKTAPKYPTEVRERAVRMVFEHRSEYATQWEAIQSIAAKMGCSRETLRNWVRQAESDRGVRAGPSKQEQDRIRELEREVRELRQANEILRKASAYFAPGGARPPTEVMIAFIDDHRSVYGVEPICRVLPIAPSTYYLYASRRADPRRLPARQQRDALLCQHIRRVWEENFRVYGARKIWRQLLREGFRIARCTVERLMRRLGLQGVRRGKSMRTTVSDKNAPCPLDHVQRQFKASKPNALWVSDFTLVATWQGFAYVAFIVDVFARRIVGWRVSSSARTDFVLDALEQALHERRPAEGNRLVHHSDRGSQYVSIRYTDRLAEAGIEPSVGSVGDSYDNALAETINGLYKAEVIHRRGPWRNVQAVELATLSWVDWFNHRRLLEPIGNIPPAEAEARYYEQLAGMPMAA
SIO_010081: LDZ21_RS30275
subclass of: SO_0000673
so part of: LDZ21_RS30275
location: join(4495..4810,4810..5744)
location: region:4495-5744:1
so has part: feature:4495-4810:1:exon
so has part: feature:4810-5744:1:exon

WP_244793709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4495-4810:1:exon

position:4810:1
position: 4810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4810-5744:1:exon

LDZ21_RS30275
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 1071679
locus tag: LDZ21_RS30275
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01497
inference: COORDINATES: profile:INFERNAL:1.1.4
note: AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: LDZ21_RS30275
subclass of: SO_0000673
so part of: LDZ21_RS30275
location: 4797..4913
location: region:4797-4913:1
so has part: feature:4797-4913:1:exon

position:4797:1
position: 4797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4913:1
position: 4913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4797-4913:1:exon

LDZ21_RS30280
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30280
so part of: sequence
location: complement(5855..7009)
location: region:5855-7009:-1
so has part: feature:5855-7009:-1:exon
subclass of: SO_0000010

position:5855:-1
position: 5855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7009:-1
position: 7009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5855-7009:-1:exon

LDZ21_RS30280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018421064.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MRTDQAYTGHGDVFVLAVSLELAAAKWKVALHDGRREKPAVHTLTQPQAAARLQAVLDLIEAQKEKWSLPAGVRTVVNYEAGQDAFWICRALQGHGIECYVIDPASTPVERHRRRAKTDRLDVNKLVINLRAWLRGERDRMHVVHVPSPQDEASRQLMRERGQLQKEVLQHRDRMRKLLVTLGCWDALDNRTFAKRLERDEVRCHDGAPLPHELRERLMRGCERLALVEQQLAALEKMRQSNVPAPARQRCDALARLQGIGEVGASRLALELFWREFNNRREVGACIGLVPQPYDSGESQVDQGISKQGNRRVRALLIEMAWTWLRYQPGSSLAKWFNHRTQGTGPNRRARRIAIVAVARRLAIALWRYLKDGVIPDGAQLKST
SIO_010081: LDZ21_RS30280
subclass of: SO_0000673
so part of: LDZ21_RS30280
location: complement(5855..7009)
location: region:5855-7009:-1
so has part: feature:5855-7009:-1:exon

WP_244798045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5855-7009:-1:exon

LDZ21_RS30285
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30285
so part of: sequence
location: complement(7803..8453)
location: region:7803-8453:-1
so has part: feature:7803-8453:-1:exon
subclass of: SO_0000010

position:7803:-1
position: 7803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8453:-1
position: 8453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7803-8453:-1:exon

LDZ21_RS30285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013435972.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MKEQRRRRDPQGTRHRILTAAQDEFAEGGLYGARIDRIARAAGTNERMLYYYFGSKDGLFLAVLDYVYESLNAAERSLDLSSASPEEGVIRVAHFLWDYYRDHPDLVRLLNDENLREGKLTRETTGLRRIVSPLLEALTSVLERGNRAGVFRDVDPAKFYTVLSGLGYYVVSNRFSLEATLGIDLNDPTEATRMRQMSTELVLAYLTHHEPVVATS
SIO_010081: LDZ21_RS30285
subclass of: SO_0000673
so part of: LDZ21_RS30285
location: complement(7803..8453)
location: region:7803-8453:-1
so has part: feature:7803-8453:-1:exon

WP_244798046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7803-8453:-1:exon

LDZ21_RS30290
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30290
so part of: sequence
location: complement(8880..9125)
location: region:8880-9125:-1
so has part: feature:8880-9125:-1:exon
subclass of: SO_0000010

position:8880:-1
position: 8880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9125:-1
position: 9125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8880-9125:-1:exon

LDZ21_RS30290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014253109.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIFYHHGAAVQPSAVRVGNGFVARALIQSQEGETDSLLDLGLFANKTAAMQFAIRSALAYVEGKPMPPPPVKVFNSEDTPE
SIO_010081: LDZ21_RS30290
subclass of: SO_0000673
so part of: LDZ21_RS30290
location: complement(8880..9125)
location: region:8880-9125:-1
so has part: feature:8880-9125:-1:exon

WP_244798047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8880-9125:-1:exon

LDZ21_RS30295
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30295
so part of: sequence
location: complement(9561..9761)
location: region:9561-9761:-1
so has part: feature:9561-9761:-1:exon
subclass of: SO_0000010

position:9561:-1
position: 9561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9761:-1
position: 9761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9561-9761:-1:exon

LDZ21_RS30295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30295
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEMHYHGAIIRPIVIQTDRAFTSSVLICDPHGDRQLYEGIGRFASDEAAALFAVNWAIAQVDGKRH
SIO_010081: LDZ21_RS30295
subclass of: SO_0000673
so part of: LDZ21_RS30295
location: complement(9561..9761)
location: region:9561-9761:-1
so has part: feature:9561-9761:-1:exon

WP_244798048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9561-9761:-1:exon

LDZ21_RS30300
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30300
so part of: sequence
location: complement(10596..10871)
location: region:10596-10871:-1
so has part: feature:10596-10871:-1:exon
subclass of: SO_0000010

position:10596:-1
position: 10596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10871:-1
position: 10871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10596-10871:-1:exon

LDZ21_RS30300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30300
inference: COORDINATES: protein motif:HMM:NF028518.2
GO function: GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA chaperone Hfq
translation: MSINASDIQADFLNAMTREKKVVWVFLVNGIKLTGPLVTFDRYVLALQSPTGIQTVFKSAVSTVCEAHVVEHLRTRDRRERPPASESHRWN
SIO_010081: LDZ21_RS30300
subclass of: SO_0000673
so part of: LDZ21_RS30300
location: complement(10596..10871)
location: region:10596-10871:-1
so has part: feature:10596-10871:-1:exon

WP_244798049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10596-10871:-1:exon

LDZ21_RS30305
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30305
so part of: sequence
location: complement(10950..12917)
location: region:10950-12917:-1
so has part: feature:10950-12917:-1:exon
subclass of: SO_0000010

position:10950:-1
position: 10950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12917:-1
position: 12917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10950-12917:-1:exon

LDZ21_RS30305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007182868.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage integrase family protein
translation: MANQPQQLTLPPPRTYTRTDFTALRAFVQRLPAATIARLYYDPEHAPHAASDGAMERYLRTMRDDLVQLALRHGSSVLADHLKASIKQHGSAKLTAMTLRMVEQASTLAAAVPLAAHPVHLWFRPLVAQRLNGEGIGTLGALVGYCNARGGSWWRSVPRIGALRARAIVAWLRRHEATLGVQVAADVDTASLVPASMNEGKGADRVIVVGGDPSAPRLAPFEHLAVPAELSGAKGFNRATSFAFIRAEHDLAAVHAYLHRYRDRPTTLRAYTRELERLILWSVVVRKKALSSLTVEDCEAYKDFLQAPLASFTGPKRPRTSGRWRPFAPEGLSADSQAYAVRVLRAAFAWLVEVRYLAGNPWSAVHEPATVTRELSVQVHRALPASLWTRMRQALDAHCDGVNGIGPESDEEARQWRAARAAILLMGDSGLRRAEAALARREDLRLAVVPGDGRASRNSSPRSPSQTTSPPTSSRSFDPAESGRGSSSVWTLTVIGKRRKQRTVPVSGATVAALRAHWHDRGRDFDAPHAQGPLIAPQCIPATRTALERHDAQADDAPYTVDAFGRLVRMAVQRLAKESAALADFSADDLVQLANTSAHAFRHTFGTRAVAREMPTDVVQAILGHASLQTTSIYVRAERRRMLEAAARYYDQDAE
SIO_010081: LDZ21_RS30305
subclass of: SO_0000673
so part of: LDZ21_RS30305
location: complement(10950..12917)
location: region:10950-12917:-1
so has part: feature:10950-12917:-1:exon

WP_244798050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10950-12917:-1:exon

LDZ21_RS30310
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30310
so part of: sequence
location: complement(13008..13484)
location: region:13008-13484:-1
so has part: feature:13008-13484:-1:exon
subclass of: SO_0000010

position:13008:-1
position: 13008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13484:-1
position: 13484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13008-13484:-1:exon

LDZ21_RS30310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019143304.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RES domain-containing protein
translation: MRIYRIADRRHPVWSGTGAMLVGGRFNSPGRPVIYGALNFAGAMLEVLVHARIGKVPKHHVWVEAEAPEDVSIERVGADDLPAGWDAPDAQVARRFGDRWIEEARSAILIVPSVVARAECNAVVNPAHPDAARLVVSAPQPVVWDQRLFVSGRDGSPG
SIO_010081: LDZ21_RS30310
subclass of: SO_0000673
so part of: LDZ21_RS30310
location: complement(13008..13484)
location: region:13008-13484:-1
so has part: feature:13008-13484:-1:exon

WP_244798051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13008-13484:-1:exon

LDZ21_RS30315
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30315
so part of: sequence
location: complement(13543..13971)
location: region:13543-13971:-1
so has part: feature:13543-13971:-1:exon
subclass of: SO_0000010

position:13543:-1
position: 13543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13971:-1
position: 13971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13543-13971:-1:exon

LDZ21_RS30315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008344738.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2384 domain-containing protein
translation: MLLVSPEQIAAVMALPSIPHSVAELDAQVREGLPKSALKEGVEHATRSAEERRALLARIVPEATFKRRRDKLSPDESEKTERLARIVATARYVWDDEADTREFLNTAHPLLEGRTPVEVALTELGARRVEELLWKLFYGLPA
SIO_010081: LDZ21_RS30315
subclass of: SO_0000673
so part of: LDZ21_RS30315
location: complement(13543..13971)
location: region:13543-13971:-1
so has part: feature:13543-13971:-1:exon

WP_035970327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13543-13971:-1:exon

LDZ21_RS30320
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30320
so part of: sequence
location: complement(14216..14419)
location: region:14216-14419:-1
so has part: feature:14216-14419:-1:exon
subclass of: SO_0000010

position:14216:-1
position: 14216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14419:-1
position: 14419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14216-14419:-1:exon

LDZ21_RS30320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014194550.1
GO component: GO:0005829 - cytosol [Evidence IEA]
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cold-shock protein
translation: MATGTVKWFNDAKGFGFITPDGGGDDLFAHFSEVRAEGFKTLAEGQKVTYDEKMGPKGKQASNIKPA
SIO_010081: LDZ21_RS30320
subclass of: SO_0000673
so part of: LDZ21_RS30320
location: complement(14216..14419)
location: region:14216-14419:-1
so has part: feature:14216-14419:-1:exon

WP_040048696.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14216-14419:-1:exon

LDZ21_RS30325
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30325
so part of: sequence
location: complement(15725..16684)
location: region:15725-16684:-1
so has part: feature:15725-16684:-1:exon
subclass of: SO_0000010

position:15725:-1
position: 15725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16684:-1
position: 16684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15725-16684:-1:exon

LDZ21_RS30325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014194549.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MTSKKEEAARLAAAALDPALMPRAERRTPRIAMNKVTDFTGELEKVERDLSEAQRRLALHEGALPTRKLEANSIKASKFANRIERSFEGTSFEAFKQEILSAGGNVQPIKVRRIGPESYEVVFGHRRHRACLELGLQVLAMIQDDMSDKDLFEEMSRENEQRKDLSAYELAMHYKRGIDLKLYRNWSEVAAVLGKTKSLMSRYSALAELPAAVVNAFRSPSDIQPKWAEKLRQVIDVDSAAVISAAKAVAGKSLPPKGVYEALINRNAQQFTRVNFSFGTWNETEKKATIDIDKTTLGPDQLESLRAFLASLQAESSPR
SIO_010081: LDZ21_RS30325
subclass of: SO_0000673
so part of: LDZ21_RS30325
location: complement(15725..16684)
location: region:15725-16684:-1
so has part: feature:15725-16684:-1:exon

WP_244798052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15725-16684:-1:exon

LDZ21_RS30330
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30330
so part of: sequence
location: complement(16697..17863)
location: region:16697-17863:-1
so has part: feature:16697-17863:-1:exon
subclass of: SO_0000010

position:16697:-1
position: 16697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17863:-1
position: 17863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16697-17863:-1:exon

LDZ21_RS30330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014194548.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MIDPLRPEYTIDDIEDQANRVADVVERVRNSIFSPDYIKKPPTFSVAQLAALCRIDRSALMRRVAKGDLPAGKEINKSRRDFTLAEARRWARAYGRSHTRGPDDRAVVVTTGNSKGGVSKTTTTMCMAQGLSLLGYRVLCIDLDPQGSLTSLCGYLPDTQVQEEDTILPLCAGDELSLRYAVKPTYWDGLDVVGCSPVAFAAEFHIPSRQSKREPDFRFYDVLNKGLHDLRAEYDVILIDTSPTLSYLSLNAFFAADGLIMPIPPRGMDFASSSQFWTLFSGLASSIAEQAGAEKTWKFIDVLLCMTEGQGNVNESVVREWVKVAYGDKLMTGEIPKTVVSSSSGTKFSTVYDITKYTGSAKTYQTARVAYDAAVDQVEAQIRRVWVN
SIO_010081: LDZ21_RS30330
subclass of: SO_0000673
so part of: LDZ21_RS30330
location: complement(16697..17863)
location: region:16697-17863:-1
so has part: feature:16697-17863:-1:exon

WP_244798053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16697-17863:-1:exon

LDZ21_RS30335
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
gene: trfA
locus tag: LDZ21_RS30335
so part of: sequence
location: 17948..18925
location: region:17948-18925:1
so has part: feature:17948-18925:1:exon
subclass of: SO_0000010

position:17948:1
position: 17948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18925:1
position: 18925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17948-18925:1:exon

LDZ21_RS30335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
gene: trfA
locus tag: LDZ21_RS30335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014194547.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid replication initiator TrfA
translation: MTKKTPGLISSEFLESSETTEKVAAKETALEIVARLEKSLVGRKSGNQQSPRPPTRVQIPLWSEDHRPVLHDLVRSALFTCGQRDARMDLKAKPIYALEHIKITYTGEELRQRDYDVYLQILHLSRGATVDNRQEWVEFEARSLIKMLGWTQNSRSLVELRETIRRLTACALEVTRSRTKSSAPVVYGGPLLLKYAGAQEGGFDEVTFWKVQINSEVAAQLKPGDYTRIDWQIRTKLSPLEKWLHAFYSTNQHPYPMKVETIHKLCGSRMAEIKFFRRAIKAALDRLIEVGFLSSWQLDETDKVRVARGQMLTANADRVTSDGVR
SIO_010081: LDZ21_RS30335
subclass of: SO_0000673
so part of: LDZ21_RS30335
location: 17948..18925
location: region:17948-18925:1
so has part: feature:17948-18925:1:exon

WP_244798054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17948-18925:1:exon

LDZ21_RS30340
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30340
pseudo: true
so part of: sequence
location: complement(<19518..>19697)
location: region:19518-19697:-1
so has part: feature:19518-19697:-1:exon
subclass of: SO_0000010

position:19518:-1
position: 19518
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:19697:-1
position: 19697
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19518-19697:-1:exon

LDZ21_RS30340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611495.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: LDZ21_RS30340
subclass of: SO_0000673
so part of: LDZ21_RS30340
location: complement(<19518..>19697)
location: region:19518-19697:-1
so has part: feature:19518-19697:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19518-19697:-1:exon

LDZ21_RS30345
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30345
pseudo: true
so part of: sequence
location: 20096..>21105
location: region:20096-21105:1
so has part: feature:20096-21105:1:exon
subclass of: SO_0000010

position:20096:1
position: 20096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21105:1
position: 21105
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20096-21105:1:exon

LDZ21_RS30345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611305.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: LDZ21_RS30345
subclass of: SO_0000673
so part of: LDZ21_RS30345
location: 20096..>21105
location: region:20096-21105:1
so has part: feature:20096-21105:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20096-21105:1:exon

LDZ21_RS30350
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
gene: istB
locus tag: LDZ21_RS30350
so part of: sequence
location: complement(21164..21916)
location: region:21164-21916:-1
so has part: feature:21164-21916:-1:exon
subclass of: SO_0000010

position:21164:-1
position: 21164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21916:-1
position: 21916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21164-21916:-1:exon

LDZ21_RS30350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
gene: istB
locus tag: LDZ21_RS30350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010940725.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MSNSLECRWLLNSSKTVSEVPGALQTKEWSFLDFLENALAHERETRQVRSRQTLVRMAGFPAIKTLDDYDYSFAVGAPRKAIDELATLRFIERGENAVLLGPSGVGKTHLAIAIGYAATQAGIKTKFITAADLMLQLEAARRQERYDAVLRHNILGPRLLIVDEIGYLPLSGDQASHFFQIVAKRYERGSMILTSNLPFTQWDETFGGNATLTAAMLDRILHHAHIIQIKGDSYRLKQQRKAGYVPASKK
SIO_010081: LDZ21_RS30350
subclass of: SO_0000673
so part of: LDZ21_RS30350
location: complement(21164..21916)
location: region:21164-21916:-1
so has part: feature:21164-21916:-1:exon

WP_244798055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21164-21916:-1:exon

LDZ21_RS30355
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30355
so part of: sequence
location: complement(21882..23131)
location: region:21882-23131:-1
so has part: feature:21882-23131:-1:exon
subclass of: SO_0000010

position:21882:-1
position: 21882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23131:-1
position: 23131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21882-23131:-1:exon

LDZ21_RS30355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611570.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MESIDKAKRKTAPKYPTEVRERAVRMVFEHRSEYATQWEAIQSIAAKMGCSRETLRNWVRQAESDRGVRAGPSKQEQDRIRELEREVRELRQANEILRKASAYFAPGGARPPTEVMIAFIDDHRSVYGVEPICRVLPIAPSTYYLYASRRADPRRLPARQQRDALLCQHIRRVWEENFRVYGARKIWRQLLREGFRIARCTVERLMRRLGLQGVRRGKSMRTTVSDKNAPCPLDHVQRQFKASKPNALWVSDFTLVATWQGFAYVAFIVDVFARRIVGWRVSSSARTDFVLDALEQALHERRPAEGNRLVHHSDRGSQYVSIRYTDRLAEAGIEPSVGSVGDSYDNALAETINGLYKAEVIHRRGPWRNVQAVELATLSWVDWFNHRRLLEPIGNIPPAEAEARYYEQLAGMPMAA
SIO_010081: LDZ21_RS30355
subclass of: SO_0000673
so part of: LDZ21_RS30355
location: complement(join(21882..22816,22816..23131))
location: region:21882-23131:-1
so has part: feature:22816-23131:-1:exon
so has part: feature:21882-22816:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22816-23131:-1:exon

position:22816:-1
position: 22816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:21882-22816:-1:exon

LDZ21_RS30355
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 1071679
locus tag: LDZ21_RS30355
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01497
inference: COORDINATES: profile:INFERNAL:1.1.4
note: AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: LDZ21_RS30355
subclass of: SO_0000673
so part of: LDZ21_RS30355
location: complement(22713..22829)
location: region:22713-22829:-1
so has part: feature:22713-22829:-1:exon

position:22713:-1
position: 22713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22829:-1
position: 22829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22713-22829:-1:exon

LDZ21_RS30360
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
gene: istA
locus tag: LDZ21_RS30360
pseudo: true
so part of: sequence
location: complement(<23182..23766)
location: region:23182-23766:-1
so has part: feature:23182-23766:-1:exon
subclass of: SO_0000010

position:23182:-1
position: 23182
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:23766:-1
position: 23766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23182-23766:-1:exon

LDZ21_RS30360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
gene: istA
locus tag: LDZ21_RS30360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006482449.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: LDZ21_RS30360
subclass of: SO_0000673
so part of: LDZ21_RS30360
location: complement(<23182..23766)
location: region:23182-23766:-1
so has part: feature:23182-23766:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23182-23766:-1:exon

LDZ21_RS30365
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30365
pseudo: true
so part of: sequence
location: <23856..24080
location: region:23856-24080:1
so has part: feature:23856-24080:1:exon
subclass of: SO_0000010

position:23856:1
position: 23856
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:24080:1
position: 24080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23856-24080:1:exon

LDZ21_RS30365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611734.1
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: integrase core domain-containing protein
SIO_010081: LDZ21_RS30365
subclass of: SO_0000673
so part of: LDZ21_RS30365
location: <23856..24080
location: region:23856-24080:1
so has part: feature:23856-24080:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23856-24080:1:exon

LDZ21_RS30370
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30370
so part of: sequence
location: 24013..24237
location: region:24013-24237:1
so has part: feature:24013-24237:1:exon
subclass of: SO_0000010

position:24013:1
position: 24013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24237:1
position: 24237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24013-24237:1:exon

LDZ21_RS30370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30370
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDIPFNSLDASAKAVINGDLSDYQTLGKAGRLYVAIAANRADLLADEGCSIVDAFSELGTVWAQAVVDRWRSR
SIO_010081: LDZ21_RS30370
subclass of: SO_0000673
so part of: LDZ21_RS30370
location: 24013..24237
location: region:24013-24237:1
so has part: feature:24013-24237:1:exon

WP_244798079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24013-24237:1:exon

LDZ21_RS31265
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS31265
so part of: sequence
location: 24838..25053
location: region:24838-25053:1
so has part: feature:24838-25053:1:exon
subclass of: SO_0000010

position:24838:1
position: 24838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25053:1
position: 25053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24838-25053:1:exon

LDZ21_RS31265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS31265
inference: COORDINATES: protein motif:HMM:NF013014.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: H-NS family nucleoid-associated regulatory protein
translation: MRTNARGPFGRERHEQSRVGRTPQKAQGTVQGRTTAKYRDPKTGATWSGMGRAPGWIANARNRDRFMIEQQ
SIO_010081: LDZ21_RS31265
subclass of: SO_0000673
so part of: LDZ21_RS31265
location: 24838..25053
location: region:24838-25053:1
so has part: feature:24838-25053:1:exon

WP_280519462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24838-25053:1:exon

LDZ21_RS30380
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30380
pseudo: true
so part of: sequence
location: 25327..>25941
location: region:25327-25941:1
so has part: feature:25327-25941:1:exon
subclass of: SO_0000010

position:25327:1
position: 25327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25941:1
position: 25941
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25327-25941:1:exon

LDZ21_RS30380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011493645.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: LDZ21_RS30380
subclass of: SO_0000673
so part of: LDZ21_RS30380
location: 25327..>25941
location: region:25327-25941:1
so has part: feature:25327-25941:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25327-25941:1:exon

LDZ21_RS30385
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30385
so part of: sequence
location: complement(27401..28336)
location: region:27401-28336:-1
so has part: feature:27401-28336:-1:exon
subclass of: SO_0000010

position:27401:-1
position: 27401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28336:-1
position: 28336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27401-28336:-1:exon

LDZ21_RS30385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30385
inference: COORDINATES: protein motif:HMM:NF013502.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chemotaxis protein CheB
translation: MDQRRNGGQVVVVAASLGGLQALQAIVSTLPADFPASMFIVMHIGTWPSQLPKLLAAESCLPVVHGSHGAVITAGTVYIAPPDRHMLLAEGSIVLSSAPKENFTRPAADPLFRSAAVNYGNRAIGVVLTGKLDDGAAGLKAIHACGGYTIIQDPSTCVAPDMPKAALKAVPPGVVAPIEDVGPAIVKALTDHSSEGVDMKERARAALELKIAATGHSSPAELERLGHRTSLTCPDCGGVIWRIGEGYPLRYRCHTGHAFSAMSLEAEQRSGAENALGQRFDAWRRSCFLRTSNFLWRRRHTASTYQRFVPK
SIO_010081: LDZ21_RS30385
subclass of: SO_0000673
so part of: LDZ21_RS30385
location: complement(27401..28336)
location: region:27401-28336:-1
so has part: feature:27401-28336:-1:exon

WP_244798056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27401-28336:-1:exon

LDZ21_RS30390
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30390
so part of: sequence
location: 28540..32682
location: region:28540-32682:1
so has part: feature:28540-32682:1:exon
subclass of: SO_0000010

position:28540:1
position: 28540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32682:1
position: 32682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28540-32682:1:exon

LDZ21_RS30390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017518763.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CheR family methyltransferase
translation: MEKSDHAAGNQTAALRKTSALDFPIVGIGASAGGVQALIRFFEHMPRDPGMAFVVVLHLSPSHESQADNVLRRVTRMPVLQVTEATPVEKNHVYLISPATALSLTDGYLSVTPAERGRGGPVAIDLFFRSLAEAHGERAISVVLSGTGSDGAVGIGRVKECGGITLAQSPEDAEYGEMPANALATGQVDIVLPVVDIPQKLIELAGNARSISLPTADVDPSGTAAEGAEDGMDAAEHALQRILKALRVRTGHDFQHYKRATVLRRIERRLQVNGLPDVLAYQRFVETHPDETGALLRDMLIGVTNFFRDREAFEAVEREVVPAIIGSKAEGESVRAWVAGCSTGEEAYSLAMLFNEGKTKSTELPKLQVFATDLDQQAIEAARAGSYPESILTDVPPARLRRFFTLERGRYVINKALRESVLFAPHNVLRDPPFSHLNLVSCRNLLIYLDRSVQRQVLETFHFALEPGGFLFLGTSESVDIADDLFSTVDKKHRIYRARILPTKVPSISSPAVTGNQAPAPRPLAPAPMRDPAGLTFATLHQQAIERYAPPSVLVDRNAEILHMSDDVGRFLRYVGGEPSHNLLTLINPDLGLELRAALFQALQNGRSVDAERVRFSHGATHSYVNMTVRPFNDATDSAVFCTVFFDEVEETTRPDQAEQSNPDQNPLVAHLEGELHRTKELLRLSIEQSNASNEELKASNEELQAINEEMRSATEELETSKEELQSVNEELITVNSALQAKVEETAKANDDLQNLIASTCIATIFVDSEMRIKRYTAPAVGLFNLIETDIGRSLFDLTHRLIYPELAADARATFQSLQITQREVSTTSGEWYLIRLLPYRTGEDHIDGAVMTLIDITERRLAQQEVRLGEERLKLAAVATDDYAIIVQDLDGRIVSWNRGAQRVFGYDEPEVLGKLVDLIFTPEDRARHVPRRERETAKAIGRAEDERWHQRKDGRRIYCSGVMTKVTSEGFSGLAKIARDMTDKKSVESQQQMQLELERATRAQAESINRQKDEFFAVLSHELKNPLNLIHVKAELLSRAPDARHIPLVWDAAQAIQRSVISQAKIIDDLLDLSRVRTGKLALNFADVDLAAVVRSVTEACATDAENSGIALSTSGTDTALVVQGDSVRVEQMLWNLLRNALKFTPRGGSVRVALSEDKRFACIEVKDSGKGIAPEFLPKVFDMFSQADGSVKRDSGGLGIGLSLTKQLAEMHGGRIEGESAGVGRGACFRLWLPKHSPFAVRSKSPGVADASILKGLRVLLVDDSIEGLEAFGALLEIEGAQVTIESSAQKALAVAEERQFDLILSDIAMPGMSGYELIEALRKRPNMAKAPAIALTGFGRDQDAARALRAGFDAHLGKPVTLTALLQVIGAITQQP
SIO_010081: LDZ21_RS30390
subclass of: SO_0000673
so part of: LDZ21_RS30390
location: 28540..32682
location: region:28540-32682:1
so has part: feature:28540-32682:1:exon

WP_244798057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28540-32682:1:exon

LDZ21_RS30395
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30395
so part of: sequence
location: 33637..33900
location: region:33637-33900:1
so has part: feature:33637-33900:1:exon
subclass of: SO_0000010

position:33637:1
position: 33637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33900:1
position: 33900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33637-33900:1:exon

LDZ21_RS30395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30395
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MENGEVTYKSFVLRPLAAYDDGMYVAMLILRNGDGIQTASGVLGSFACALDARRFALKHGMDEIDQGAVPKTESQPRRQSAFRTLQA
SIO_010081: LDZ21_RS30395
subclass of: SO_0000673
so part of: LDZ21_RS30395
location: 33637..33900
location: region:33637-33900:1
so has part: feature:33637-33900:1:exon

WP_244798058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33637-33900:1:exon

LDZ21_RS30400
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30400
so part of: sequence
location: 33976..34179
location: region:33976-34179:1
so has part: feature:33976-34179:1:exon
subclass of: SO_0000010

position:33976:1
position: 33976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34179:1
position: 34179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33976-34179:1:exon

LDZ21_RS30400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016346944.1
GO component: GO:0005829 - cytosol [Evidence IEA]
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cold-shock protein
translation: METGTVKWFNDAKGFGFITPDNGGDDLFAHFSEVRAEGFKSLAENQKVSFETKRGPKGLQAANIKPL
SIO_010081: LDZ21_RS30400
subclass of: SO_0000673
so part of: LDZ21_RS30400
location: 33976..34179
location: region:33976-34179:1
so has part: feature:33976-34179:1:exon

WP_244798059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33976-34179:1:exon

LDZ21_RS30405
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30405
so part of: sequence
location: complement(35111..35296)
location: region:35111-35296:-1
so has part: feature:35111-35296:-1:exon
subclass of: SO_0000010

position:35111:-1
position: 35111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35296:-1
position: 35296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35111-35296:-1:exon

LDZ21_RS30405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30405
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEQDKHDSITLRIYRAPSGRWAGCLLVGEKDIGSFDGYDSPEDVEEAVRESGVYPDHVEVY
SIO_010081: LDZ21_RS30405
subclass of: SO_0000673
so part of: LDZ21_RS30405
location: complement(35111..35296)
location: region:35111-35296:-1
so has part: feature:35111-35296:-1:exon

WP_244798060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35111-35296:-1:exon

LDZ21_RS30410
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30410
so part of: sequence
location: complement(35354..35827)
location: region:35354-35827:-1
so has part: feature:35354-35827:-1:exon
subclass of: SO_0000010

position:35354:-1
position: 35354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35827:-1
position: 35827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35354-35827:-1:exon

LDZ21_RS30410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30410
inference: COORDINATES: protein motif:HMM:NF013235.2
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MTEELNPSTGERWITMSNALTHKRGGQPLKPLRVDMRWVGRCTYHEGEGWVELAWWPEILSALFGLKKNFTTYQLQQATALRSAYSWRMLELLSRFQSTGWAEYDIEDFATAMDATEKQRADFAKLRTKIIEPAKKGTGGKGRLENRLGADQGRSQG
SIO_010081: LDZ21_RS30410
subclass of: SO_0000673
so part of: LDZ21_RS30410
location: complement(35354..35827)
location: region:35354-35827:-1
so has part: feature:35354-35827:-1:exon

WP_244798061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35354-35827:-1:exon

LDZ21_RS30415
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
gene: istA
locus tag: LDZ21_RS30415
so part of: sequence
location: 36608..38101
location: region:36608-38101:1
so has part: feature:36608-38101:1:exon
subclass of: SO_0000010

position:36608:1
position: 36608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38101:1
position: 38101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36608-38101:1:exon

LDZ21_RS30415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
gene: istA
locus tag: LDZ21_RS30415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612300.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MSGTRITDQQVHLYMNKRKQHSQEVAAAKTGISVRTARRIERDATLPSQRPRQSWRTRPDPFVDVWDSEVVPLLRSAPNLMGITVLRKLQDDHPDRYPDSMRRTLERRIRQWRALEGPTQEVFFPQEHQPGVRGLSDFTDMSKLCVTIGGAPFGHRLYHFVLAFSRWEYANVVEGGESFEALAAGLQNALWQAGGCPREHRSDSLSAAFKNLTEQEDFTKRYAALLDHYGMEGTRNNRGLGHENGSVESSHRYLKEAVDQALMLRGHREFADRAAYDEFIREVVMRRNRRNAAAFRIERAQLQDLPERRTTDFVEEEALVTRCSTFTVRGILYSAPSRLIGHRLKVRIYGDRLDCYLSGAPVHSTARGSRAADNRHALDYRHFIDSLKRKPQAFRGFAFRDALFPREAYRRTWERLEAQLTQRQACKTIVGLLELAGHHGVEALLAERLDVLLEAGELPDLKQLRDEFAPRQALCPEVVVEMPPVAVYDELLDKVAA
SIO_010081: LDZ21_RS30415
subclass of: SO_0000673
so part of: LDZ21_RS30415
location: 36608..38101
location: region:36608-38101:1
so has part: feature:36608-38101:1:exon

WP_244797895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36608-38101:1:exon

LDZ21_RS30420
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
gene: istB
locus tag: LDZ21_RS30420
so part of: sequence
location: 38098..38958
location: region:38098-38958:1
so has part: feature:38098-38958:1:exon
subclass of: SO_0000010

position:38098:1
position: 38098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38958:1
position: 38958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38098-38958:1:exon

LDZ21_RS30420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
gene: istB
locus tag: LDZ21_RS30420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003551146.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MNIPAHDNGRLALMLNELRLPTIGRLWPEFVERSDKEGWPATRLLGALLEHELAERAKRRIERHRTESHLDPTKTLATFDFGMVPMVSKAHVTALATGDSWLEKGATILLFGPPGGGKSHLGSAIGHALIDVGYRVLFTRTSELVQKLQAARQSLQLPSALTKLDRFDLIILDDLWYARKDQAETSVLFELIAERYERKSLLITANQPFSGWNDVFPDPGMTVAAIDRLVHHSTIFECRKLSPSKGQRQTERAPATITRRQLRWRRDNYELASDNYNPLTGQNNCR
SIO_010081: LDZ21_RS30420
subclass of: SO_0000673
so part of: LDZ21_RS30420
location: 38098..38958
location: region:38098-38958:1
so has part: feature:38098-38958:1:exon

WP_244798062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38098-38958:1:exon

LDZ21_RS30425
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30425
so part of: sequence
location: 38972..39244
location: region:38972-39244:1
so has part: feature:38972-39244:1:exon
subclass of: SO_0000010

position:38972:1
position: 38972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39244:1
position: 39244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38972-39244:1:exon

LDZ21_RS30425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30425
inference: COORDINATES: protein motif:HMM:NF013235.2
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MTLSNLAFTHGNRANALVKSPSIEEFQDAMDASPAYRANFKELRKRVIEPSVKELLDKNGPVVKWEPVKAGRKVVRLRCEFEPDPQGALF
SIO_010081: LDZ21_RS30425
subclass of: SO_0000673
so part of: LDZ21_RS30425
location: 38972..39244
location: region:38972-39244:1
so has part: feature:38972-39244:1:exon

WP_244798063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38972-39244:1:exon

LDZ21_RS30430
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30430
so part of: sequence
location: complement(39769..40701)
location: region:39769-40701:-1
so has part: feature:39769-40701:-1:exon
subclass of: SO_0000010

position:39769:-1
position: 39769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40701:-1
position: 40701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39769-40701:-1:exon

LDZ21_RS30430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30430
inference: COORDINATES: protein motif:HMM:NF024244.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: integrase domain-containing protein
translation: MKSTSKPASLPKRSQAREHSVEAKFMMAALYKGAATLTRQKMLTTFRAFATHAKQRRYGDVDPATVTEKQLRNYVGTRIEAGITPRTIQNEVSHLRRALQGAGRGDWADAVTNEQLGVPTGTRIGIGRVVDANVLGHALEHASIDTRAWIQLERCLGLRREEMIESYKSLKQWEAALARGQSFVTIRHGTKGGRVRDTVIPEPYRARALAAVRSALEVTTKTRPYLVNAKSTRAAQKQVQDRFAALGLTGKDSGHALRRAFCRDNYEHYRSEGHSEKEALAMCSRDLGHGEGRGRWVWNNYLRATYEQQA
SIO_010081: LDZ21_RS30430
subclass of: SO_0000673
so part of: LDZ21_RS30430
location: complement(39769..40701)
location: region:39769-40701:-1
so has part: feature:39769-40701:-1:exon

WP_244798064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39769-40701:-1:exon

LDZ21_RS30435
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30435
so part of: sequence
location: 41586..41783
location: region:41586-41783:1
so has part: feature:41586-41783:1:exon
subclass of: SO_0000010

position:41586:1
position: 41586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41783:1
position: 41783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41586-41783:1:exon

LDZ21_RS30435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008961661.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2934 domain-containing protein
translation: MEEPILEEQLRTLAYQLWEQAGRPDGRSDEFWQQAQHELGVQTNGLADEATTDAKGLPSNLPLPK
SIO_010081: LDZ21_RS30435
subclass of: SO_0000673
so part of: LDZ21_RS30435
location: 41586..41783
location: region:41586-41783:1
so has part: feature:41586-41783:1:exon

WP_244798065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41586-41783:1:exon

LDZ21_RS30440
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30440
so part of: sequence
location: 43704..43907
location: region:43704-43907:1
so has part: feature:43704-43907:1:exon
subclass of: SO_0000010

position:43704:1
position: 43704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43907:1
position: 43907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43704-43907:1:exon

LDZ21_RS30440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017330817.1
GO component: GO:0005829 - cytosol [Evidence IEA]
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cold-shock protein
translation: MDTGTVKWFNDSKGFGFITPDAGGDDLFAHFSEVRGEGFKTLAENQKVSYETKRGPKGMQAANISPQ
SIO_010081: LDZ21_RS30440
subclass of: SO_0000673
so part of: LDZ21_RS30440
location: 43704..43907
location: region:43704-43907:1
so has part: feature:43704-43907:1:exon

WP_027780628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43704-43907:1:exon

LDZ21_RS30445
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30445
so part of: sequence
location: 44101..44331
location: region:44101-44331:1
so has part: feature:44101-44331:1:exon
subclass of: SO_0000010

position:44101:1
position: 44101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44331:1
position: 44331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44101-44331:1:exon

LDZ21_RS30445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011490588.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQNTNYIHQYNGYSISPSAHRLPDGWFAANLLLTRGDAGSAEAVSYKFDVLDYFDSETQAVGHATAWARGWVDSRG
SIO_010081: LDZ21_RS30445
subclass of: SO_0000673
so part of: LDZ21_RS30445
location: 44101..44331
location: region:44101-44331:1
so has part: feature:44101-44331:1:exon

WP_244798066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44101-44331:1:exon

LDZ21_RS30450
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30450
so part of: sequence
location: 44649..45224
location: region:44649-45224:1
so has part: feature:44649-45224:1:exon
subclass of: SO_0000010

position:44649:1
position: 44649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45224:1
position: 45224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44649-45224:1:exon

LDZ21_RS30450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30450
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MALLIVQVAVSGELVEVFEMPVDDVDGHRMLACANEDERVIRRAGQTLEEGEVWIDLIDRDGETLFDEVACFHRADAPDALQLHLGMNAAVVKDCLSKSNVASLYARHRVAAQAYFRKVDRLVDCSAVSSRQSNRRRVGEASVMDLVIELRRRLDGVDTLLALSELPTQVQAAAGHLKDAAKSYATAVQHL
SIO_010081: LDZ21_RS30450
subclass of: SO_0000673
so part of: LDZ21_RS30450
location: 44649..45224
location: region:44649-45224:1
so has part: feature:44649-45224:1:exon

WP_244798067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44649-45224:1:exon

LDZ21_RS30455
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30455
so part of: sequence
location: 45424..47343
location: region:45424-47343:1
so has part: feature:45424-47343:1:exon
subclass of: SO_0000010

position:45424:1
position: 45424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47343:1
position: 47343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45424-47343:1:exon

LDZ21_RS30455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020652927.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain S-box protein
translation: MKNYTQTTGAISGEQSFRLLVAGVTDYAILMLDTAGFIKTWNAGAQRIKGYAASEILGKHFSVFYPKNEQVAGRPDGVLRAAVDEGKFEDEGWRVRKDGSQFWASVVIDPLHDDSGELIGFAKITRDMTERKVAQEALRQSEQQFGRLVQGVTDYAIYMLSPAGEVTSWNSGAERIKGYARDEILGKHFSVFYTEEDRAGGLPAQMLSIAATEGRVERESWRVRKDGSRFWAHVVIDAIHNDVGKLVGFAKVTRDVTERRQAAEALERANAALFQSQKMESLGQLTGGVAHDFNNLLAVMSNGLDVMSLRLHEHADIRMLETMQRAVARGATLTQQLLSFARQQPLKAEKCHLNGVLRSFEAVLRRAVDAAIEFEVKQEPRPRPVLLDAARFEAALLNLVVNARDAMPDGGKIVIAVKNVELAAGTVGALMPGPYVRVSVSDTGSGMLPEVAARAYEPFFTTKEVGKGTGLGLSQVYGFITQSGGDVVIDSKPGRGTVVSMYLPVARGTSGDEESFTGPMLDTVLVVEDEPDLLDATAELFRSLGYEVLTASNGSQAMEALSRRDDIRVLFTDVVMPKGIDGIQLARSTRDLHPDIKIVLASGYPLPALKAHHGNLSDFAFIHKPYRLADLVRTLGRAA
SIO_010081: LDZ21_RS30455
subclass of: SO_0000673
so part of: LDZ21_RS30455
location: 45424..47343
location: region:45424-47343:1
so has part: feature:45424-47343:1:exon

WP_280519463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45424-47343:1:exon

LDZ21_RS30460
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30460
pseudo: true
so part of: sequence
location: 47440..>48575
location: region:47440-48575:1
so has part: feature:47440-48575:1:exon
subclass of: SO_0000010

position:47440:1
position: 47440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48575:1
position: 48575
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47440-48575:1:exon

LDZ21_RS30460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612098.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: LDZ21_RS30460
subclass of: SO_0000673
so part of: LDZ21_RS30460
location: 47440..>48575
location: region:47440-48575:1
so has part: feature:47440-48575:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47440-48575:1:exon

LDZ21_RS30460
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 1071679
locus tag: LDZ21_RS30460
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01497
inference: COORDINATES: profile:INFERNAL:1.1.4
note: AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LDZ21_RS30460
subclass of: SO_0000673
so part of: LDZ21_RS30460
location: 47742..47858
location: region:47742-47858:1
so has part: feature:47742-47858:1:exon

position:47742:1
position: 47742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47858:1
position: 47858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47742-47858:1:exon

LDZ21_RS30465
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30465
so part of: sequence
location: 48659..49476
location: region:48659-49476:1
so has part: feature:48659-49476:1:exon
subclass of: SO_0000010

position:48659:1
position: 48659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49476:1
position: 49476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48659-49476:1:exon

LDZ21_RS30465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611267.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MPAPIIDDELWALIEPLLPAPRPRRKRYPGRLPVSDRAALNGILLVLKTGIRWNHLPTRLGFGSGATCWRRLHDWQQAGVWDRLHGLLLDKLRESGQLDFSHAAVDSSSVRAVGAGPKTGPNPTDRARPGSKHHILVDANGVPVSAILTGANRNDVTQLLPLVDAIPPIRGTRGRPLRKPKVIYADRGYDSDSHRRRLRERGIQPVIARRRTEHGSGLGKFRWVVERTHSWLHGFRRLRTRFERRADIHEAFLKLACALVCWNIFSRTERAF
SIO_010081: LDZ21_RS30465
subclass of: SO_0000673
so part of: LDZ21_RS30465
location: join(48659..49007,49007..49476)
location: region:48659-49476:1
so has part: feature:48659-49007:1:exon
so has part: feature:49007-49476:1:exon

WP_244797973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48659-49007:1:exon

position:49007:1
position: 49007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:49007-49476:1:exon

LDZ21_RS30470
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30470
pseudo: true
so part of: sequence
location: complement(<49644..>50137)
location: region:49644-50137:-1
so has part: feature:49644-50137:-1:exon
subclass of: SO_0000010

position:49644:-1
position: 49644
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:50137:-1
position: 50137
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49644-50137:-1:exon

LDZ21_RS30470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011488770.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: LDZ21_RS30470
subclass of: SO_0000673
so part of: LDZ21_RS30470
location: complement(<49644..>50137)
location: region:49644-50137:-1
so has part: feature:49644-50137:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49644-50137:-1:exon

LDZ21_RS30475
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
gene: istB
locus tag: LDZ21_RS30475
so part of: sequence
location: complement(50165..51025)
location: region:50165-51025:-1
so has part: feature:50165-51025:-1:exon
subclass of: SO_0000010

position:50165:-1
position: 50165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51025:-1
position: 51025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50165-51025:-1:exon

LDZ21_RS30475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
gene: istB
locus tag: LDZ21_RS30475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003551146.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MNIPAHDNGRLALMLNELRLPTIGRLWPEFVERSDKEGWPATRLLGALLEHELAERAKRRIERHRTESHLDPTKTLATFDFGMVPMVSKAHVTALATGDSWLEKGATILLFGPPGGGKSHLGSAIGHALIDVGYRVLFTRTSELVQKLQAARQSLQLPSALTKLDRFDLIILDDLWYARKDQAETSVLFELIAERYERKSLLITANQPFSGWNDVFPDPGMTVAAIDRLVHHSTIFECRKLSPSKGQRQTERAPATITRRQLRWRRDNYELASDNYNPLTGQNNCR
SIO_010081: LDZ21_RS30475
subclass of: SO_0000673
so part of: LDZ21_RS30475
location: complement(50165..51025)
location: region:50165-51025:-1
so has part: feature:50165-51025:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50165-51025:-1:exon

LDZ21_RS30480
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
gene: istA
locus tag: LDZ21_RS30480
so part of: sequence
location: complement(51022..52515)
location: region:51022-52515:-1
so has part: feature:51022-52515:-1:exon
subclass of: SO_0000010

position:51022:-1
position: 51022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52515:-1
position: 52515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51022-52515:-1:exon

LDZ21_RS30480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
gene: istA
locus tag: LDZ21_RS30480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612300.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MSGTRITDQQVHLYMNKRKQHSQEVAAAKTGISVRTARRIERDATLPSQRPRQSWRTRPDPFVDVWDSEVVPLLRSAPNLMGITVLRKLQDDHPDRYPDSMRRTLERRIRQWRALEGPTQEVFFPQEHQPGVRGLSDFTDMSKLCVTIGGAPFGHRLYHFVLAFSRWEYANVVEGGESFEALAAGLQNALWQAGGCPREHRSDSLSAAFKNLTEQEDFTKRYAALLDHYGMEGTRNNRGLGHENGSVESSHRYLKEAVDQALMLRGHREFADRAAYDEFIREVVMRRNRRNAAAFRIERAQLQDLPERRTTDFVEEEALVTRCSTFTVRGILYSAPSRLIGHRLKVRIYGDRLDCYLSGAPVHSTARGSRAADNRHALDYRHFIDSLKRKPQAFRGFAFRDALFPREAYRRTWERLEAQLTQRQACKTIVGLLELAGHHGVEALLAERLDVLLEAGELPDLKQLRDEFAPRQALCPEVVVEMPPVAVYDELLDKVAA
SIO_010081: LDZ21_RS30480
subclass of: SO_0000673
so part of: LDZ21_RS30480
location: complement(51022..52515)
location: region:51022-52515:-1
so has part: feature:51022-52515:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51022-52515:-1:exon

LDZ21_RS30485
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
gene: istA
locus tag: LDZ21_RS30485
pseudo: true
so part of: sequence
location: complement(<52677..53402)
location: region:52677-53402:-1
so has part: feature:52677-53402:-1:exon
subclass of: SO_0000010

position:52677:-1
position: 52677
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:53402:-1
position: 53402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52677-53402:-1:exon

LDZ21_RS30485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
gene: istA
locus tag: LDZ21_RS30485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011488770.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: LDZ21_RS30485
subclass of: SO_0000673
so part of: LDZ21_RS30485
location: complement(<52677..53402)
location: region:52677-53402:-1
so has part: feature:52677-53402:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52677-53402:-1:exon

LDZ21_RS30490
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30490
so part of: sequence
location: complement(53606..54580)
location: region:53606-54580:-1
so has part: feature:53606-54580:-1:exon
subclass of: SO_0000010

position:53606:-1
position: 53606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54580:-1
position: 54580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53606-54580:-1:exon

LDZ21_RS30490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30490
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MRAALHHLLALPFYAEAVHTIAPDPIARELHNFDGFLRDTCGLKRSTCVYRVRHLEAFFASRTLDESAESLALTIPAIEAFLVDLARRHWRPSSLGVVCTSLRSYLRYRALRGDDTRLAVSTLPLIANWPHRNPPKVLSEIQLERFLQAFNVNTASGMRDYAIARCILDLGLRGDEATHLTLDSIDWRRGVVTLPHTKSNRVQRMPLPEQAGAALARYLREGRPLTDSRYVFVRHRAPFGVPLTVAAIRNAMNRAFERCNLDDQFCNTHVLRRSTATRLQRANVSIKEIADLLRHRSLDTARVYARVDIERLREVALSWPGSTS
SIO_010081: LDZ21_RS30490
subclass of: SO_0000673
so part of: LDZ21_RS30490
location: complement(53606..54580)
location: region:53606-54580:-1
so has part: feature:53606-54580:-1:exon

WP_244798068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53606-54580:-1:exon

LDZ21_RS30495
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30495
pseudo: true
so part of: sequence
location: <55042..55269
location: region:55042-55269:1
so has part: feature:55042-55269:1:exon
subclass of: SO_0000010

position:55042:1
position: 55042
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:55269:1
position: 55269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55042-55269:1:exon

LDZ21_RS30495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006482547.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase domain-containing protein
SIO_010081: LDZ21_RS30495
subclass of: SO_0000673
so part of: LDZ21_RS30495
location: <55042..55269
location: region:55042-55269:1
so has part: feature:55042-55269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55042-55269:1:exon

LDZ21_RS30500
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30500
pseudo: true
so part of: sequence
location: complement(55696..56827)
location: region:55696-56827:-1
so has part: feature:55696-56827:-1:exon
subclass of: SO_0000010

position:55696:-1
position: 55696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56827:-1
position: 56827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55696-56827:-1:exon

LDZ21_RS30500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018003639.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: LDZ21_RS30500
subclass of: SO_0000673
so part of: LDZ21_RS30500
location: complement(55696..56827)
location: region:55696-56827:-1
so has part: feature:55696-56827:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55696-56827:-1:exon

LDZ21_RS30505
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30505
so part of: sequence
location: 58349..58591
location: region:58349-58591:1
so has part: feature:58349-58591:1:exon
subclass of: SO_0000010

position:58349:1
position: 58349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58591:1
position: 58591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58349-58591:1:exon

LDZ21_RS30505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30505
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKDAIELDFKGYLVTGLAVPDGTSFAAMVIVRLPSGDQVVSGLLNRFHEPYEAKRSAIEHGVSEIDRFLAARRGLNASMA
SIO_010081: LDZ21_RS30505
subclass of: SO_0000673
so part of: LDZ21_RS30505
location: 58349..58591
location: region:58349-58591:1
so has part: feature:58349-58591:1:exon

WP_244798069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58349-58591:1:exon

LDZ21_RS30510
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30510
so part of: sequence
location: 58768..59025
location: region:58768-59025:1
so has part: feature:58768-59025:1:exon
subclass of: SO_0000010

position:58768:1
position: 58768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59025:1
position: 59025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58768-59025:1:exon

LDZ21_RS30510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008350405.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNRILALTSILLVMTSMSAQAQSTQKAASPTPQHGTATNQAADSASSGASTSGGPTLMQQRQKGMSPEGASGADATGKATGKMKQ
SIO_010081: LDZ21_RS30510
subclass of: SO_0000673
so part of: LDZ21_RS30510
location: 58768..59025
location: region:58768-59025:1
so has part: feature:58768-59025:1:exon

WP_244798070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58768-59025:1:exon

LDZ21_RS30515
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30515
so part of: sequence
location: 59763..60959
location: region:59763-60959:1
so has part: feature:59763-60959:1:exon
subclass of: SO_0000010

position:59763:1
position: 59763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60959:1
position: 60959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59763-60959:1:exon

LDZ21_RS30515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009489732.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256 family transposase
translation: MATTKRSTNRPSAEALVAGDRDLMKALMKDALQEVLEAEMTELLGAAPNERSETRSGYRAGYYGRALVTRIGKLELRVPRDRHGEFSTALFERYARSEKALVAALAEMYVQGVSTRKVKAITEELCGHSFSASAISAINKGLDATLAKFAHRPLEEAYPYLIVDARYEKVRESGVIRSQAVLIAIGINWEGHRQVLAVELANRESHSSWKEFLLALKKRGLSGVEFVASDDHAGLKKAIGEVLPEAAWQRCYVHFLRNALDYLPRKADDDCLQELRWMYDRRDLQEAQRDLAAWISKWQGKYPKLVDWVEGNIAETLTFYRLPRAHHKHLKSTNMLERLNEEIRRRTRIVRIFPNEASCLRLIRALCSETHETWLEDSRYLNMALLAEQKKEFLRAAA
SIO_010081: LDZ21_RS30515
subclass of: SO_0000673
so part of: LDZ21_RS30515
location: 59763..60959
location: region:59763-60959:1
so has part: feature:59763-60959:1:exon

WP_244793817.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59763-60959:1:exon

LDZ21_RS30520
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30520
so part of: sequence
location: complement(61020..61286)
location: region:61020-61286:-1
so has part: feature:61020-61286:-1:exon
subclass of: SO_0000010

position:61020:-1
position: 61020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61286:-1
position: 61286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61020-61286:-1:exon

LDZ21_RS30520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30520
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGIPDERSTKLVPSVFDSGDGHDGALLEMLTASNGVDANLDNRAARDKFVSLNNAPNAMVKQMKSHLNQKERSCVRQVVQKPDAGGFS
SIO_010081: LDZ21_RS30520
subclass of: SO_0000673
so part of: LDZ21_RS30520
location: complement(61020..61286)
location: region:61020-61286:-1
so has part: feature:61020-61286:-1:exon

WP_244798071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61020-61286:-1:exon

LDZ21_RS30525
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30525
so part of: sequence
location: 63776..64795
location: region:63776-64795:1
so has part: feature:63776-64795:1:exon
subclass of: SO_0000010

position:63776:1
position: 63776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64795:1
position: 64795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63776-64795:1:exon

LDZ21_RS30525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611601.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MTHTIVGVDIAKSVMQVHWVDPETGEIVNRPVKRAAFLEYFANRRPCLVGMESCSGSQHWARRLIEMGHRVKLMPAKFIKAFNIRNKNDAADARAIWMATQMDSKEVAVKTETQQAVLALHRMRQQLVKFRTMQINSLRGLLTEYGEVMGVGRAALDKAVGGVLERLSGRLPSILIDTLREQWTGLDNLDRQICEIERRLHEWMKDDRSAKAIAAIPGVGLLTATAAVATMGHAKAFKSGREFAAWLGLVPAQTGSGGKIELQGISKRGDTYLRTLLVHGARSIIYRVKEPGPWATQMKQRRPLNVVIVAMANKLARIIWAMMAHQRPYRNDYESMKQG
SIO_010081: LDZ21_RS30525
subclass of: SO_0000673
so part of: LDZ21_RS30525
location: 63776..64795
location: region:63776-64795:1
so has part: feature:63776-64795:1:exon

WP_244798072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63776-64795:1:exon

LDZ21_RS30530
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30530
so part of: sequence
location: complement(65246..65431)
location: region:65246-65431:-1
so has part: feature:65246-65431:-1:exon
subclass of: SO_0000010

position:65246:-1
position: 65246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65431:-1
position: 65431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65246-65431:-1:exon

LDZ21_RS30530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30530
inference: COORDINATES: protein motif:HMM:NF013235.2
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MDAKPTHRANFKALRQRIIEPAVAELREKNGLLIDWQSVKDGRRVGTLRLEFVRNPQGALF
SIO_010081: LDZ21_RS30530
subclass of: SO_0000673
so part of: LDZ21_RS30530
location: complement(65246..65431)
location: region:65246-65431:-1
so has part: feature:65246-65431:-1:exon

WP_244798073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65246-65431:-1:exon

LDZ21_RS30535
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30535
pseudo: true
so part of: sequence
location: <65507..>65777
location: region:65507-65777:1
so has part: feature:65507-65777:1:exon
subclass of: SO_0000010

position:65507:1
position: 65507
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:65777:1
position: 65777
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65507-65777:1:exon

LDZ21_RS30535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006757738.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: GntP family permease
SIO_010081: LDZ21_RS30535
subclass of: SO_0000673
so part of: LDZ21_RS30535
location: <65507..>65777
location: region:65507-65777:1
so has part: feature:65507-65777:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65507-65777:1:exon

LDZ21_RS30540
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30540
so part of: sequence
location: 66218..66466
location: region:66218-66466:1
so has part: feature:66218-66466:1:exon
subclass of: SO_0000010

position:66218:1
position: 66218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66466:1
position: 66466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66218-66466:1:exon

LDZ21_RS30540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012433247.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1488 domain-containing protein
translation: MALFFPNPSRSYDAARRCVFFWGYDGSREITFQVDRGTLEGLQPALGFDERSFLLAFDEVREKLLEIAKRRYVRGPQNRYSI
SIO_010081: LDZ21_RS30540
subclass of: SO_0000673
so part of: LDZ21_RS30540
location: 66218..66466
location: region:66218-66466:1
so has part: feature:66218-66466:1:exon

WP_244797998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66218-66466:1:exon

LDZ21_RS30545
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30545
so part of: sequence
location: 66575..66808
location: region:66575-66808:1
so has part: feature:66575-66808:1:exon
subclass of: SO_0000010

position:66575:1
position: 66575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66808:1
position: 66808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66575-66808:1:exon

LDZ21_RS30545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014253392.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHRVIAYRGFEIDVQLTSTAEDMFEVTFQIKGGTNLEVLGARGSRIPLRNGPFTERWAYLVGEIAGQAAIDVLLGPA
SIO_010081: LDZ21_RS30545
subclass of: SO_0000673
so part of: LDZ21_RS30545
location: 66575..66808
location: region:66575-66808:1
so has part: feature:66575-66808:1:exon

WP_244797999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66575-66808:1:exon

LDZ21_RS30550
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30550
so part of: sequence
location: 66957..67412
location: region:66957-67412:1
so has part: feature:66957-67412:1:exon
subclass of: SO_0000010

position:66957:1
position: 66957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67412:1
position: 67412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66957-67412:1:exon

LDZ21_RS30550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007584088.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2934 domain-containing protein
translation: MNDRLVDVMDRNGAVLHTYPITLNESSNVADDSEYRAKALEAAAHGRLVPDAELGTLTARMHAGRGGQMAPYGDNLETNSETKSGLDQAVRERAYLLWEKDGCPEGLAEEYWHRALDQHLRERAYVLWQQEGSPEGRQDEYWRRLVDFQAQ
SIO_010081: LDZ21_RS30550
subclass of: SO_0000673
so part of: LDZ21_RS30550
location: 66957..67412
location: region:66957-67412:1
so has part: feature:66957-67412:1:exon

WP_244798000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66957-67412:1:exon

LDZ21_RS30555
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30555
so part of: sequence
location: 69177..72248
location: region:69177-72248:1
so has part: feature:69177-72248:1:exon
subclass of: SO_0000010

position:69177:1
position: 69177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72248:1
position: 72248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69177-72248:1:exon

LDZ21_RS30555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009770972.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transglycosylase domain-containing protein
translation: MSEPLEEELLRASRVTPARRWIAWLFAIASVFICAVAVRMTQIEMQTSQRQAHYLSELGSEIGFSVGDGPSASIPQASAGPYDARLGYALLPSFEERLLARGFAVTAQARGSAAMLSMADQGLFVPYEEKDRAGLTLLDSRGNPLFSASSPGLVYDSFESVPPVIVHALLFIEDRNLLDDSVPNRNPAIDWGRFGRALFDQGLRVIDKHAPQPGGSTLATQIEKFRHSSGGRTASAPEKLRQIASASVRAYLEGPQTMPVRRQLVVRYLNSVPLAARPGIGEINGLPDGMAAWYGRDFDEYNRILNAPVSAEMLDAQALAFKQALSLMIAQRAPSRFLRRGSPELKRRTDSYLRLLGANGIIAPALRDMALAVPLELNPAPHRRADVSFVTRKGVTALRSNLLGILGVPSLYDLDRLDLSVTATLDAPVQRAVSERLASAATRDGAADAGLFGYHMLRPHDDPSKISYSFTLMERKGGTNLVRVQTDSINEPFDISRSGRLNLGSTAKMRTVITYLQIVSALHARYGAMSAAQLRGVTPDRQDVLTRWALDYLAKTPDRSLPAMLDAAVARKYSASAGETFYTGGGAQAFSNFEATDNSRVLTVESAFGHSVNLVFVRLMRDIVHYEMVQVAGPSSDWLDDPAVRHAYLTRFADAESRVYMSRFYGRYRLRTPEEALALLLRDVRKSPPKLATVLRSVAPDEPQAWFDARMREALRGTPSASITDEDLAKLYVKYAVDKFNLNDRGYIASVHPLELWTVNYLRSHTLATVNDVQDASRDARVTAYSWLFKTRYHATQDRRIKRMVELQAYAEITKSWRALGYPFASVTPSYAAAIGASGDRPEALAQLIGIVECGGKGLGTQRILTLEFAKGTPYETRFAQKSAPAKPLLAPEIATVVQRLLRDVVEGGTAKRLADGLALSDGRALDVAGKTGTGDQRFNVYARGRRLIESRKVNRTATFVFVIGERFFGTLTAYVREPYAAHYDFTSALAVQLLKSLGPALRPLLTDGQAVAAAGEAKPETR
SIO_010081: LDZ21_RS30555
subclass of: SO_0000673
so part of: LDZ21_RS30555
location: 69177..72248
location: region:69177-72248:1
so has part: feature:69177-72248:1:exon

WP_244798001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69177-72248:1:exon

LDZ21_RS30560
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30560
so part of: sequence
location: complement(72258..72455)
location: region:72258-72455:-1
so has part: feature:72258-72455:-1:exon
subclass of: SO_0000010

position:72258:-1
position: 72258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72455:-1
position: 72455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72258-72455:-1:exon

LDZ21_RS30560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30560
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDLVMVHRWLNGDETPVAMPRVYHASTQYRHHQVITRSHWAKAQLTAYRTNSNHHSGKRHLRLAS
SIO_010081: LDZ21_RS30560
subclass of: SO_0000673
so part of: LDZ21_RS30560
location: complement(72258..72455)
location: region:72258-72455:-1
so has part: feature:72258-72455:-1:exon

WP_244798002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72258-72455:-1:exon

LDZ21_RS30565
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30565
so part of: sequence
location: complement(76019..78220)
location: region:76019-78220:-1
so has part: feature:76019-78220:-1:exon
subclass of: SO_0000010

position:76019:-1
position: 76019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78220:-1
position: 78220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76019-78220:-1:exon

LDZ21_RS30565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013334485.1
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: family 1 glycosylhydrolase
translation: MDERLVLWGGLECTVNRVRDRSFSQLDRNGHATRESDLERFASLGIQALRYPVLWERTAPNGVKNADWSWLDARLPELRALGVEPIAGLVHHGSGPLPGGLLDPGFAAQLADYAHAVAQRYPWLQYYTPVNEPNTTARFSGLYGVWHPHATDDRTYLQALINQCKATVYSMREIRKINPQAKLVQTDDLGKTQGTPAMAKLVAFYNERRWLSWDLLCGAVKPGHALWQYIMHAGIAAEDVLWFADNPCPPDIIGINYYITSERWLDDRVENYPEAYRCEWYGHRLADIETARALERPTSGIRALMDEAWERYNLPLAVTEAHIDATRQDQMRWLHEIWWAASDARQRGIDMRAVTVWALLGSYDWNCLVTDDRGYYESGPFDLRGAERRETALAALMRDLAAGRPHEHPVLHGTGWWRRPGRFLCEPVVYESPGVPSLTSLTTISPEYAPPILIVGNGSLSRAFADICAQRDLRYRTAKRDEIDRMNASGIDQLIESHSPWAIIDASDPVDVDEAERTGGENLRCMTARARSLAEACTRHDMQYMTFSSDFVFNGMRAHPYVETDEVSPINRFGSIMADLEAQVLRACPQSLVLRTGSMFGPWDGVNFLLRALDALSQERPFEAARDVTFSPTYVPDLVHACLDLLIDAEAGIVHMSNRGAVTWADLAIQAATIAHMDADLVRARAATQMRYLARRPSYSVLMSDRAAILPTLDSALLRYVEHWRQAQNVAPQ
SIO_010081: LDZ21_RS30565
subclass of: SO_0000673
so part of: LDZ21_RS30565
location: complement(76019..78220)
location: region:76019-78220:-1
so has part: feature:76019-78220:-1:exon

WP_244798003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76019-78220:-1:exon

LDZ21_RS30570
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30570
so part of: sequence
location: 78587..79732
location: region:78587-79732:1
so has part: feature:78587-79732:1:exon
subclass of: SO_0000010

position:78587:1
position: 78587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79732:1
position: 79732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78587-79732:1:exon

LDZ21_RS30570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013983520.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 1 protein
translation: MQAARPPIVSARSGLPRTLLCLSHLRWDFVYQRPQHLLSRIAKHTQVLFFEEPRRTDQSHAWLDVRTTDEGIRVLAPRLPEGLTQEQDEPALRALLDDYLLQAQAWDLGLWYYSPMMLAFTDHLDARLVVYDCMDELSAFKKAPPQLAEREARLMHKADVVFTGGQSLYESKRRFHHNVHAFPSSVDVRHFEQACRPQEQPSDQEAIRGPRLGFYGVLDERFDVPLIGALAAARPDWQFVMLGPVVKIAPADLPQAPNIHYLGQKSYDDLPRYLAGWDVALMPFALNESTRYISPTKTPEYLAAGRPVVSTPIADVVSRYGQSGVVRIAENARQFERAIEDALADGADRSAFIARARAVLAGMSWDNTCAAMLAEVQKCVF
SIO_010081: LDZ21_RS30570
subclass of: SO_0000673
so part of: LDZ21_RS30570
location: 78587..79732
location: region:78587-79732:1
so has part: feature:78587-79732:1:exon

WP_244798075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78587-79732:1:exon

LDZ21_RS30575
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
gene: glf
locus tag: LDZ21_RS30575
so part of: sequence
location: 79855..80925
location: region:79855-80925:1
so has part: feature:79855-80925:1:exon
subclass of: SO_0000010

position:79855:1
position: 79855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80925:1
position: 80925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79855-80925:1:exon

LDZ21_RS30575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
gene: glf
locus tag: LDZ21_RS30575
EC number: 5.4.99.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014597314.1
GO function: GO:0008767 - UDP-galactopyranose mutase activity [Evidence IEA]
GO process: GO:0009273 - peptidoglycan-based cell wall biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-galactopyranose mutase
translation: MAERLAAQYGQRVLIVDRRPHIGGNAYDEHNSDGVLIHRYGPHIFHTNAQRVVDYLSRFTEWRPYRHRVLASVDGMLVPMPINLTTLNLLYSLNLSPEQAEAFLAARAEPVSEIRTSEDVVVNKVGRELYEKFFRCYTRKQWGIDPSDLDRSVTARVPIRTTTEDSYFNDVFQCMPREGYTRMFEKMLSHPNIEVKLGTDYKEVRKRVNFGKLIYTGPIDEYFDHCLGKLPYRSLIFRHETLDQEFFQSVAVVNYPSESVRHTRITEYKHLTGQQHRKTSITYEYPNDEGDPYYPIPRPANAALFKRYQALAEFHPEVTFAGRLGSYRYYNMDQVVAQALSTVERIAEKEGMNQVA
SIO_010081: LDZ21_RS30575
subclass of: SO_0000673
so part of: LDZ21_RS30575
location: 79855..80925
location: region:79855-80925:1
so has part: feature:79855-80925:1:exon

WP_244798076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79855-80925:1:exon

LDZ21_RS30580
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30580
so part of: sequence
location: complement(80926..81150)
location: region:80926-81150:-1
so has part: feature:80926-81150:-1:exon
subclass of: SO_0000010

position:80926:-1
position: 80926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81150:-1
position: 81150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80926-81150:-1:exon

LDZ21_RS30580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30580
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTITAKRDQFARQLNRGKEFSRINGKWQVFLQRFDFWQYLPNADSQSSNEDIAAIHLNEKVGLDVARSAAHRR
SIO_010081: LDZ21_RS30580
subclass of: SO_0000673
so part of: LDZ21_RS30580
location: complement(80926..81150)
location: region:80926-81150:-1
so has part: feature:80926-81150:-1:exon

WP_244798004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80926-81150:-1:exon

LDZ21_RS30585
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30585
so part of: sequence
location: 81303..82460
location: region:81303-82460:1
so has part: feature:81303-82460:1:exon
subclass of: SO_0000010

position:81303:1
position: 81303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82460:1
position: 82460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81303-82460:1:exon

LDZ21_RS30585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30585
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLLFVAFQGAIGTLAAFIGYFVVGVDDINAMFRFTAYMLTDASGAALLAYLIGPKVGLTGRRLMRLSFLIPGALLLSGNESVAVMAAVFGLFLGLTWSARYWLEMSVLTDSQRDSYASRSGALAVAGGIIATLVATLFLSKTGNSSQALYRLYGGVCFVAAFVLGRNVTEAPMVAAKNPFAVIAQPEFRNCLPLFFLESGLLGVGGAVGSVGAAMSLGSASDLGWVSSVAGLTGAAALYVTRKSRGVHNRSGWLGWSCLAIAISFVLLGASAWLPGLFVAHSILRSAAGPFLNASEHVLNQRALDIRGELVDRIVARDAVMWVMRMSSLLGFWWLSSTMSPPHLLAVGSAILALGAAAEYAIGQTWFAADARNPHIGPSSVRQSG
SIO_010081: LDZ21_RS30585
subclass of: SO_0000673
so part of: LDZ21_RS30585
location: 81303..82460
location: region:81303-82460:1
so has part: feature:81303-82460:1:exon

WP_244798005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81303-82460:1:exon

LDZ21_RS30590
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30590
pseudo: true
so part of: sequence
location: complement(<82486..>82605)
location: region:82486-82605:-1
so has part: feature:82486-82605:-1:exon
subclass of: SO_0000010

position:82486:-1
position: 82486
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:82605:-1
position: 82605
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82486-82605:-1:exon

LDZ21_RS30590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612315.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: LDZ21_RS30590
subclass of: SO_0000673
so part of: LDZ21_RS30590
location: complement(<82486..>82605)
location: region:82486-82605:-1
so has part: feature:82486-82605:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82486-82605:-1:exon

LDZ21_RS30595
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30595
pseudo: true
so part of: sequence
location: 82734..>82951
location: region:82734-82951:1
so has part: feature:82734-82951:1:exon
subclass of: SO_0000010

position:82734:1
position: 82734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82951:1
position: 82951
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82734-82951:1:exon

LDZ21_RS30595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612315.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase zinc-binding domain-containing protein
SIO_010081: LDZ21_RS30595
subclass of: SO_0000673
so part of: LDZ21_RS30595
location: 82734..>82951
location: region:82734-82951:1
so has part: feature:82734-82951:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82734-82951:1:exon

LDZ21_RS30600
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30600
so part of: sequence
location: 84068..84784
location: region:84068-84784:1
so has part: feature:84068-84784:1:exon
subclass of: SO_0000010

position:84068:1
position: 84068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84784:1
position: 84784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84068-84784:1:exon

LDZ21_RS30600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014253137.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLLTTRDGLPRLSWGAIIAGVILSTIVYLIMSVLGTAIGASLLAPMSKPDVLRGFGFGSGVWVILTTVVAGFVGSYYAGRCAPVLGWLHGLLSWSVMTLLIVYGMTSLVTGVVSTAGSVAATSAQVGATAANQTGGPNQVIDSAKQQVQAAVASAASAASGPAAEQNAREAADTAARGVARASWFSFAALVVGAIIAIVSGGAGFRHQPPFEETGGSALGRDGLADRKRAVQGGGRL
SIO_010081: LDZ21_RS30600
subclass of: SO_0000673
so part of: LDZ21_RS30600
location: 84068..84784
location: region:84068-84784:1
so has part: feature:84068-84784:1:exon

WP_244798006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84068-84784:1:exon

LDZ21_RS30605
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
gene: rplI
locus tag: LDZ21_RS30605
pseudo: true
so part of: sequence
location: complement(86340..>86678)
location: region:86340-86678:-1
so has part: feature:86340-86678:-1:exon
subclass of: SO_0000010

position:86340:-1
position: 86340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86678:-1
position: 86678
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86340-86678:-1:exon

LDZ21_RS30605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
gene: rplI
locus tag: LDZ21_RS30605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011516698.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 50S ribosomal protein L9
SIO_010081: LDZ21_RS30605
subclass of: SO_0000673
so part of: LDZ21_RS30605
location: complement(86340..>86678)
location: region:86340-86678:-1
so has part: feature:86340-86678:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86340-86678:-1:exon

LDZ21_RS30610
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30610
so part of: sequence
location: 87304..87507
location: region:87304-87507:1
so has part: feature:87304-87507:1:exon
subclass of: SO_0000010

position:87304:1
position: 87304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87507:1
position: 87507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87304-87507:1:exon

LDZ21_RS30610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016346944.1
GO component: GO:0005829 - cytosol [Evidence IEA]
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cold-shock protein
translation: MATGTVKWFNDAKGFGFITPDEGGDDLFAHFSEVRAEGFKSLAEGQKVSYDEKMGPKGKQASNIKPV
SIO_010081: LDZ21_RS30610
subclass of: SO_0000673
so part of: LDZ21_RS30610
location: 87304..87507
location: region:87304-87507:1
so has part: feature:87304-87507:1:exon

WP_244798007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87304-87507:1:exon

LDZ21_RS30615
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30615
so part of: sequence
location: complement(88820..89962)
location: region:88820-89962:-1
so has part: feature:88820-89962:-1:exon
subclass of: SO_0000010

position:88820:-1
position: 88820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89962:-1
position: 89962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88820-89962:-1:exon

LDZ21_RS30615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016347406.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PHB depolymerase family esterase
translation: MNLFAPFFLAHDAFWSSFMPGARLPGQFLTASDSTALALQTASDHGPQSSDYLTSVLSTPMAETFTETSPGEVPPPAKGGAQWLSHTCEQGGDVHHAKVYLPSSYDGRSLPMMVMLHGAQQHPDDFAAGTRMNVLAEETGFIVVYPEQRESANLLRCWNWFLPSNQARSSGETAALAALTRDVIVRFNADRARVYVAGLSAGGAMATNLAVTHPDLYAAAAVHSGMAFGVAKEHVSAWCAMNDGRGTVCLPKPDPQVAPRRTVPLIVFHGDADDTVHPLNSDQIVEMNHLLSRNAADTPACPTTCVERETNGRAYTRDVWRDQNGSLLTERWLVHGLGHAWSGGHADGTYTDPRGPDASAAIVRFVSQFTLDNAPDGLLI
SIO_010081: LDZ21_RS30615
subclass of: SO_0000673
so part of: LDZ21_RS30615
location: complement(88820..89962)
location: region:88820-89962:-1
so has part: feature:88820-89962:-1:exon

WP_244798008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88820-89962:-1:exon

LDZ21_RS30620
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30620
so part of: sequence
location: 90683..91402
location: region:90683-91402:1
so has part: feature:90683-91402:1:exon
subclass of: SO_0000010

position:90683:1
position: 90683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91402:1
position: 91402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90683-91402:1:exon

LDZ21_RS30620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016347174.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FadR/GntR family transcriptional regulator
translation: MPTLHRQVLNQMGEQICAGKFAPGDILPAEDQLAELMQVSRITIRETMKSLSAKGMLQVRRRHGTIVLPRSHWQLFDPDVITWRARSGVVDNDLIRDLMELRTIIEPNAARLAAKRATPEDRIAVRRAFRAMERAVAGQGEYVPADLAFHGAILTACHNQFVQQMQNALSAILRTSFELSSEIEGGPARSLPMHEALCVAIEKADGQAAEQAVLTLIERAENDFNDRAALARTVNDTPS
SIO_010081: LDZ21_RS30620
subclass of: SO_0000673
so part of: LDZ21_RS30620
location: 90683..91402
location: region:90683-91402:1
so has part: feature:90683-91402:1:exon

WP_244798009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90683-91402:1:exon

LDZ21_RS30625
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30625
so part of: sequence
location: 91505..92272
location: region:91505-92272:1
so has part: feature:91505-92272:1:exon
subclass of: SO_0000010

position:91505:1
position: 91505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92272:1
position: 92272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91505-92272:1:exon

LDZ21_RS30625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006894239.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MNKLFDLSGRTALVTGSARGIGYALVEGFALAGARVIVNGTKAETVDAAVGRLQAQGFDARSRAFDVTDEASVAAAFSAWDAEGVEVDIVVNNAGIQFRKPMIELALADWQRVIDTNLTSAFIVAREAARRMIERKRGGKIINIGSLTSEGARATVAPYTAAKGGIKMLTRAMSAEWAPFDIQANAIGPGYILTDMNQALVDNADFDKWVKGSNPSQRWGKPEELVGTAVYLASPASSYVNGQIIYVDGGWLAVL
SIO_010081: LDZ21_RS30625
subclass of: SO_0000673
so part of: LDZ21_RS30625
location: 91505..92272
location: region:91505-92272:1
so has part: feature:91505-92272:1:exon

WP_244798010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91505-92272:1:exon

LDZ21_RS30630
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30630
so part of: sequence
location: 92286..93605
location: region:92286-93605:1
so has part: feature:92286-93605:1:exon
subclass of: SO_0000010

position:92286:1
position: 92286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93605:1
position: 93605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92286-93605:1:exon

LDZ21_RS30630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008346630.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MDNIRTVAPQRWWHLMPIIFITYSLAYLDRANYGFAAAAGIDKDLGITSATSSLIGSLFFLGYCLFQVPGAIYAQKNSVKKLIFASLILWGVCAAATGMVSNIPMLMALRFILGIVEAAVMPSMLMYISRWFTRTERSRANTFLILGNPVTVLWMSIVSGYLVRNFGWREMFVIEGVPAILWAIVWWFTVKDRPADAPWMSDKEKADFDAILKSEQAHIAPVRDYKAAFRSSIVLKCCAIHALWSIGVYGFIMWLPSILKSASKSIDIVAVGWLSAVPYLAAIVLMLVASYLSDKTRNRKLFVWPLLLIGMIAFVGSYLVGTSNFWLSFTLLVIAGATMYAPYGPFFALIPELIPSNVLGGAIGLINACGALGAFLGAWLVGYLNGATGSPSASYVFMAAALLASVVLMMLVPAQSTHFATPKGGTRIKSDSVASTTVK
SIO_010081: LDZ21_RS30630
subclass of: SO_0000673
so part of: LDZ21_RS30630
location: 92286..93605
location: region:92286-93605:1
so has part: feature:92286-93605:1:exon

WP_244798011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92286-93605:1:exon

LDZ21_RS30635
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30635
so part of: sequence
location: 93609..94856
location: region:93609-94856:1
so has part: feature:93609-94856:1:exon
subclass of: SO_0000010

position:93609:1
position: 93609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94856:1
position: 94856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93609-94856:1:exon

LDZ21_RS30635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012433212.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: enolase C-terminal domain-like protein
translation: MATLITDIRVILTAPEGINLTVVRVETNQPGLYGLGCATFAYRHLAVKCLIEEYLRPLLIGRDAEAIEELWQLIHQNAYWRNGPIENNAISGVDMALWDIKGKQANMPLYQLFGGKVREGVPIYRHADGRDLAELCDNIQRYREQGITHIRCQSGGYGGGTFGPAPSHAPNGAADGIYLDSRKYIRETLKLFDGIRSKIGFDVALCHDVHERLKPVEAIRFARELEPFDLFFLEDAIALEEGEWMRQLRAKTTTPLAQGELFNNAYEWRFLITERLIDFIRVHLSQIGGITAGRKLQIFAEQFGVRTAWHGPGDMSPLAHAANIHIDLASRNFGVQEWSGTEPPNFVIQELKGPREALLDVFPGLPEFRHGFVYSNDKPGLGVDLDEDEAAKYPCQKNVTLWTHTRLVDGGLQTP
SIO_010081: LDZ21_RS30635
subclass of: SO_0000673
so part of: LDZ21_RS30635
location: 93609..94856
location: region:93609-94856:1
so has part: feature:93609-94856:1:exon

WP_244798012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93609-94856:1:exon

LDZ21_RS30640
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30640
so part of: sequence
location: 95378..96400
location: region:95378-96400:1
so has part: feature:95378-96400:1:exon
subclass of: SO_0000010

position:95378:1
position: 95378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96400:1
position: 96400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95378-96400:1:exon

LDZ21_RS30640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011493138.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MHERTQYQQLQPEERPTIASLHLQGSSIRAMARILGRSPATVSRELRRNHSPAGYASVPAEALSAARRSAGRRPTKLGPQSVCWRVVLTLLEWKWSPQQISGTLKRMYPTDPTQQVSHETIYTAIYAQPRGELRRQLIACLRHGHSTRMPRTRGTDRRGKIPDMVSIHVRPPEIEDRLLPGHWEGDFIKGANNASSVGVLVERTSRLVLLAKMEDATAASALAGFSAKLNSIAKPLRQSFTYDQGKELSRHAELTAATGVKVYFCDPHSPWQRGTCENTNGLLRQYLPKGTDLSVYSQDELDAIADSLNSRPRATHAFHSPLEVFAATLASAAQPHGSKH
SIO_010081: LDZ21_RS30640
subclass of: SO_0000673
so part of: LDZ21_RS30640
location: 95378..96400
location: region:95378-96400:1
so has part: feature:95378-96400:1:exon

WP_244798013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95378-96400:1:exon

LDZ21_RS30645
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30645
so part of: sequence
location: complement(96541..100659)
location: region:96541-100659:-1
so has part: feature:96541-100659:-1:exon
subclass of: SO_0000010

position:96541:-1
position: 96541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100659:-1
position: 100659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96541-100659:-1:exon

LDZ21_RS30645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008345251.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CheR family methyltransferase
translation: MATSMPRNEQRKPAGPDFVVVGIGASAGGVEALLRLFETAPASPGVAFVVVLHLSPDHASHAHEVIQNVTALRVRQVSTPVPLEKDNVYVIPPGKFLSMVDGHLCLSDPEPPRLPPTSIDVFFRSLADAHGARAVAIVLSGSGADGSVGIASVREQGGITVAQRPEEAQYGEMPRNAIATGHVDLVLPVTDIIPRLLELVRNAPRIALPAASGPDEDAGGTESLIPDANGMDDVLDTLRARTRHDFSSYKRGTVMRRIERRMQVNALTSVTAYRNFLTENVDETPRLLADMLIGVTNFFRDPEAFDALEKALPAELAQSLAERDEVRAWVPACATGEEAFSIAILLDEAVRRLPRRPRITVYASDIDERAIAIARAASYPSAITNDLSPARLAQYFTREGNRYRLVKSLRDTVIFAAHNLLRDPPFSRIDLISCRNLLIYLDRRAQKRVLEAFHFSLRPQGLLFLGTAESADFAHELFSPVDKSRKIYRVVPNASTSALPTYANIQQYPFDGGGQTFFTSPTGSKAADVEVPDQARSFDLFGPPLIVVRKDGTIVHRSANAIRLSEDVRQARAVNIFAIVREDAHPRLRQALQHCIEAGRRQDEEALPFSTASGEIAVDLSFRPYHDPARDERLISLTCDLLTPLPVASSAMSGEPADQTLDSLRQALAGSEGRVRSSLEHAQKSAEELRASNEELQAMNEELRSATEELEASREELQSLNEELVTVNSELVSKVNEAARVSDDLKNLIALVGVATVFVDRTLHIKRYTSPAEALFNILPSDTGRPLQHLTHKLDYPEMIDDLRTAFESLTKIEKEVQSRDGRTFLARVLPYRTDDDRIDGAVLALIDITGQKAAQAEARVSEEKLQLAARETHDFAIIVLDDAGVVVSWNAGASHIFGYKAEEMLGGSLDAIFTGDDRSDGVPARERGKARSKGRAEDERWYATKSGEHVFCSGFLSRIDVPGFSGFTKIVHDATQRKLVQGRKDLALARQRADYTEIQKLSRLKDEFIAVLSHELKNPLNLIHMKAEILARIPEARHIGRVREVADAIQKSVLTQAKIIDDLLDFSRIQTGKLSLRFEPTDVASIVRSIAEAIRDDFVANRIDLQLHVPARPVFIAADSVRIEQIIWNLLSNAMKFTPPGGTVTVRLQQEADKVCLEVADTGVGIAPGLLESIFEIFQQAPNVPSRARAMGLGIGLSLVRQLARLHGGTVEAFSEGEGRGARFVVSLPAEASFAHRQAGDKPADLSVFAGARVLLIEDSEESLQAMADLFSVYDARVTTSVNAAEALQAAKASDFDFIITDVNLPDLDGYQVVAQLRQLQNCSGVPIVAVTGRPVAQEETRARDAGCDACLAKPFNLQALAEVIQRVRPR
SIO_010081: LDZ21_RS30645
subclass of: SO_0000673
so part of: LDZ21_RS30645
location: complement(96541..100659)
location: region:96541-100659:-1
so has part: feature:96541-100659:-1:exon

WP_244798014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96541-100659:-1:exon

LDZ21_RS30650
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30650
so part of: sequence
location: complement(100773..101357)
location: region:100773-101357:-1
so has part: feature:100773-101357:-1:exon
subclass of: SO_0000010

position:100773:-1
position: 100773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101357:-1
position: 101357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100773-101357:-1:exon

LDZ21_RS30650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30650
inference: COORDINATES: protein motif:HMM:NF012301.2
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MLINLHELPPDRFGTGNVLALSALNSVGHDSFGAMREASAEPRNGACVRFTQRISGANMKSGVWTNRKASLHRPLRVLVVDDYAGGAEAVSLALSLAGHEARFAVDGDSAFRCIAFWTPDIAVLDINMPSPDGYQLAALLRAADGTGEAVLIAFTSMDEQAVQPRGVAVGFDAFCQKGSGAGPLLDIIARIAPL
SIO_010081: LDZ21_RS30650
subclass of: SO_0000673
so part of: LDZ21_RS30650
location: complement(100773..101357)
location: region:100773-101357:-1
so has part: feature:100773-101357:-1:exon

WP_244798015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100773-101357:-1:exon

LDZ21_RS30655
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30655
so part of: sequence
location: 101340..102359
location: region:101340-102359:1
so has part: feature:101340-102359:1:exon
subclass of: SO_0000010

position:101340:1
position: 101340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102359:1
position: 102359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101340-102359:1:exon

LDZ21_RS30655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30655
inference: COORDINATES: protein motif:HMM:NF013502.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chemotaxis protein CheB
translation: MQIDQHNDNRVVAVGTSLGGLAALRTLLSSLPTDFSVPMLVVMHIGAHRSILPELLASTCPLPVAHARDNVPLEPSKIYVAPSDRHLLVHDGRTRLTVGPKENFTRPAIDPLFRSVAVEYGPRAVAVVLTGDLDDGAAGAAAVHACGGSVIVQAPEDSVAPSMPASALRAVPTATVACLDRLAQAIVDAVHQPDREVPMRVDKRTIEIETQIALTGIASPADLDQLGRRSTLTCPDCGGVVWQVGDAAPLRYRCHTGHAFSEASLDAAQMAELEDALWSSVRRAEERAALAASRARAAETLGDVALARSEHLLSEKLHTLERSLREFIMANPSADDNRS
SIO_010081: LDZ21_RS30655
subclass of: SO_0000673
so part of: LDZ21_RS30655
location: 101340..102359
location: region:101340-102359:1
so has part: feature:101340-102359:1:exon

WP_244798016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101340-102359:1:exon

LDZ21_RS30660
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30660
pseudo: true
so part of: sequence
location: 103487..104305
location: region:103487-104305:1
so has part: feature:103487-104305:1:exon
subclass of: SO_0000010

position:103487:1
position: 103487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104305:1
position: 104305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103487-104305:1:exon

LDZ21_RS30660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611267.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: LDZ21_RS30660
subclass of: SO_0000673
so part of: LDZ21_RS30660
location: 103487..104305
location: region:103487-104305:1
so has part: feature:103487-104305:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:103487-104305:1:exon

LDZ21_RS30665
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30665
pseudo: true
so part of: sequence
location: complement(<104314..>104448)
location: region:104314-104448:-1
so has part: feature:104314-104448:-1:exon
subclass of: SO_0000010

position:104314:-1
position: 104314
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:104448:-1
position: 104448
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104314-104448:-1:exon

LDZ21_RS30665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30665
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009396742.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Appr-1-p processing protein
SIO_010081: LDZ21_RS30665
subclass of: SO_0000673
so part of: LDZ21_RS30665
location: complement(<104314..>104448)
location: region:104314-104448:-1
so has part: feature:104314-104448:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104314-104448:-1:exon

LDZ21_RS30670
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30670
pseudo: true
so part of: sequence
location: complement(<104472..104683)
location: region:104472-104683:-1
so has part: feature:104472-104683:-1:exon
subclass of: SO_0000010

position:104472:-1
position: 104472
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:104683:-1
position: 104683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104472-104683:-1:exon

LDZ21_RS30670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012402327.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0045893 - positive regulation of DNA-templated transcription [Evidence IEA]; GO:1902208 - regulation of bacterial-type flagellum assembly [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: FlhC family transcriptional regulator
SIO_010081: LDZ21_RS30670
subclass of: SO_0000673
so part of: LDZ21_RS30670
location: complement(<104472..104683)
location: region:104472-104683:-1
so has part: feature:104472-104683:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104472-104683:-1:exon

LDZ21_RS30675
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30675
so part of: sequence
location: complement(104734..105006)
location: region:104734-105006:-1
so has part: feature:104734-105006:-1:exon
subclass of: SO_0000010

position:104734:-1
position: 104734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105006:-1
position: 105006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104734-105006:-1:exon

LDZ21_RS30675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014193240.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator
translation: MLAAGYVSIIRGRISAIRGPAWRLQAGLNSTSRSGMLFRASAIFEFKGCKASQLLCFFPLSADAMLAGLAGRSNEAAVAVAVSNDIRLAA
SIO_010081: LDZ21_RS30675
subclass of: SO_0000673
so part of: LDZ21_RS30675
location: complement(104734..105006)
location: region:104734-105006:-1
so has part: feature:104734-105006:-1:exon

WP_244798017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104734-105006:-1:exon

LDZ21_RS30680
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30680
so part of: sequence
location: 105247..106005
location: region:105247-106005:1
so has part: feature:105247-106005:1:exon
subclass of: SO_0000010

position:105247:1
position: 105247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106005:1
position: 106005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105247-106005:1:exon

LDZ21_RS30680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30680
inference: COORDINATES: protein motif:HMM:NF005559.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
translation: MTNETPVAIITGAASGIGQSTAQLLASRGYRVAIADLRGPAALDTAEAIRASGFEAIPLTVDVADETSVKAMVEAVVAKWGRLDVLVNSAGIESAKPFLDITPEEFRRVVEVNTTGTWLCCQQAIRQMLTQKSGSIVNLSSIAGIKGGGLLGTAAYATSKGALLAMTKSLAREFAKSGIRVNAVAPSFTLTDFVRRQLATKPERFIDSIYAATPMGRGAQPVEIAEVVAFLASPQASFVTGGVYNADGGGAM
SIO_010081: LDZ21_RS30680
subclass of: SO_0000673
so part of: LDZ21_RS30680
location: 105247..106005
location: region:105247-106005:1
so has part: feature:105247-106005:1:exon

WP_244798018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105247-106005:1:exon

LDZ21_RS30685
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30685
so part of: sequence
location: complement(106034..106921)
location: region:106034-106921:-1
so has part: feature:106034-106921:-1:exon
subclass of: SO_0000010

position:106034:-1
position: 106034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106921:-1
position: 106921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106034-106921:-1:exon

LDZ21_RS30685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016453639.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR substrate-binding domain-containing protein
translation: MPRPSLNALRAFEATARLRSFGEAASELSVTHGAISRHIRSLEDNLGVLLLLRNAHATEPTPEGARLAEGLSRAFNLIQASIDQVRPGPLTLSCSASIMMYWLLPRLSRLHRKEPQLEVGFHTGYGEVDFARDHISVAIRLSTIKPPKDVEPKPLVDEWIGVVCSPEYMRTTRITTAEDLERARLLATATRPAAWDNWYEASRLSPAHRPAVAESFEHFYLQIQAAKCGLGVAAVPRILVRDELDSGTLVAPFGFVKGPRKLVLWVAPHLEARPQSVALVGWLKDELLGTEGAAA
SIO_010081: LDZ21_RS30685
subclass of: SO_0000673
so part of: LDZ21_RS30685
location: complement(106034..106921)
location: region:106034-106921:-1
so has part: feature:106034-106921:-1:exon

WP_244798019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106034-106921:-1:exon

LDZ21_RS30690
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30690
so part of: sequence
location: 107213..108490
location: region:107213-108490:1
so has part: feature:107213-108490:1:exon
subclass of: SO_0000010

position:107213:1
position: 107213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108490:1
position: 108490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107213-108490:1:exon

LDZ21_RS30690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016453640.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribulose-bisphosphate carboxylase large subunit family protein
translation: MSKSPRPRAEFTVRYFVESSVPLAKAAEVIAGEQSSGTFLALPGETDELKERARARVVRVDSLPPVLEPSLRSAFVERREPAPLYYRGELEIAFPVENVGANLPQLLSTIAGNLFELGEITGLRLLDIDLPDDYAARFPGPAFGIEGTRRVTGVHGRPLIGTIVKPSIGLLPEQTAQIVDDLCGADIDFIKDDELLGDPSYASFDARLAAVIPVLHRHADRMGRMPMYAINISGTIDEMLRRHDQVLAAGGTCIMVCVNWVGFAGVEHVRRHSQLPLHGHRNGWGAFTRCPQLGFSFAAYQKLWRLAGVDHLHVNGVRGKFWEPDASVIDSARSCLAPFAGVQPLMPVFSSGQWASQAPDLFNALGSIDLMHLAGGGIIGHPQGIPAGVASMREGWEAATEGIDLDTYAQTHPALGAALAHFKAI
SIO_010081: LDZ21_RS30690
subclass of: SO_0000673
so part of: LDZ21_RS30690
location: 107213..108490
location: region:107213-108490:1
so has part: feature:107213-108490:1:exon

WP_244798020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107213-108490:1:exon

LDZ21_RS30695
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30695
so part of: sequence
location: 108497..109897
location: region:108497-109897:1
so has part: feature:108497-109897:1:exon
subclass of: SO_0000010

position:108497:1
position: 108497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109897:1
position: 109897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108497-109897:1:exon

LDZ21_RS30695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016453641.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: four-carbon acid sugar kinase family protein
translation: MSKTNHPTLRLAFYGDDFTGSTDALEVLAFAGLRCALFLDPPTREELATLGGFDAIGVAGDSRAMTPAEMDQALTPVFAALRALDAPVIHYKVCSTFDSAPHIGSIGRVMEIARKGFGAQAIPIVAGTPALKRYCTFGNLFARSGTDGKIYRIDRHPIMSAHPVTPMDEGNLLCHFARQTAMPLAGFFLPNFDDGREALDRAWQAALDAAPAALLLDTATRAHLTEVGRLLDGYAKAHGPVFAVGSSGLEYAMTQWWAEQGALPAITRSFDRIQPAAPILAMSGSASPLSAAQIDAAIAAGFADIAIDARALIDGGEGARAFDDIVNRALDALRDGRSVVMHTARGPRDPRIGEMLDALVAQGMTRDDARHRGGRTLGQRLGAIADAVLKAEPLRRLILSGGDTSSQVTKVLGPDALEIDTRLTPGAPLCRVISEKPHLRELQVALKGGQMGDAGFFVIARDGNVT
SIO_010081: LDZ21_RS30695
subclass of: SO_0000673
so part of: LDZ21_RS30695
location: 108497..109897
location: region:108497-109897:1
so has part: feature:108497-109897:1:exon

WP_244798021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108497-109897:1:exon

LDZ21_RS30700
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30700
so part of: sequence
location: complement(110183..112012)
location: region:110183-112012:-1
so has part: feature:110183-112012:-1:exon
subclass of: SO_0000010

position:110183:-1
position: 110183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112012:-1
position: 112012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110183-112012:-1:exon

LDZ21_RS30700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013542288.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRAP transporter large permease subunit
translation: MPSGLALADRVLGLIVSVPAALLVLAEIVLLFSGVVARYAFHRPLVWGDELASILFLWLAMTGAATALHRGTHMRMTAIVNRAGKEWGAIWDTVSLVASLLFLGLIAAPAYAYFNQQWGIVTPALEINDALRVAAIVYGVSIMLLMSVVKLLALGWKQAIIGIVVVAAVVAGLHTAGPVLQSLGNVNLLIFFVGVVGFTVLSGMPIAFSFGLAVFSYLSLSTSMPLEIVVSRMDEGMSQLLLLAVPMFIFLGLLIEMTGMARAMINFLASLLGHVRGGLSYVLVGAMYLISGISGSKAADMAAVAPILFPEMKKRGEKPGELVALLSATGAQTETVPPSIVLITIGSVTGVSISALFTGGLLPGLVLALALCVLVWWRARGTDPVSAKRAPGSEIAKLLVISIPALALPVVIRFAVVEGVATATEVSTVGIVYSLIAGLLIYRMFDWKRISPMLVETAALSGAILIIIGTATAMAWALTQSGFSHSLASFMEHLPGGAVSFMAVSVVMFVLLGSVLEGIPAIVLFGPLLFPIARDVGIHEVQYAMVVILSMGLGLFSPPFGVGYYGACAVSKIHPDEGIRPIIGYMIALFVGIIVIAAVPWISIGFLKS
SIO_010081: LDZ21_RS30700
subclass of: SO_0000673
so part of: LDZ21_RS30700
location: complement(110183..112012)
location: region:110183-112012:-1
so has part: feature:110183-112012:-1:exon

WP_244798077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110183-112012:-1:exon

LDZ21_RS30705
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30705
so part of: sequence
location: complement(112081..113112)
location: region:112081-113112:-1
so has part: feature:112081-113112:-1:exon
subclass of: SO_0000010

position:112081:-1
position: 112081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113112:-1
position: 113112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112081-113112:-1:exon

LDZ21_RS30705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015666979.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRAP transporter substrate-binding protein
translation: MKIDRRSFLVTGAGTVAVAASGMMGAPWIRRAQAAEFSYKVGTDLPASHPLNVRIQQAADAIKKETDGRMEIRVFANNQLGGDPDMFAQLRAGALEFFTLSGANALSSLVPKTAITGVGFAFKDYNQVFSALDGELGAHLRGLITKGGLVVQDKVWDNGFRQITTSSRPIKTPGDLQGMKVRVPPGRLWIALFRALSAAPASISFNEVYSSLQTKVVEGQENALAVVDAAKLYEVQKYCSMTSHMWDGFWFLGNRAAWEKLPANIRDITSKHLNAHAMLQRQDVAKLNSSLQQALESKGLQFNAPDMNSFREVLQKGGFYAEQKQFFGDEEWALLEKVTGKLA
SIO_010081: LDZ21_RS30705
subclass of: SO_0000673
so part of: LDZ21_RS30705
location: complement(112081..113112)
location: region:112081-113112:-1
so has part: feature:112081-113112:-1:exon

WP_244798022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112081-113112:-1:exon

LDZ21_RS30710
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30710
so part of: sequence
location: complement(113248..114360)
location: region:113248-114360:-1
so has part: feature:113248-114360:-1:exon
subclass of: SO_0000010

position:113248:-1
position: 113248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114360:-1
position: 114360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113248-114360:-1:exon

LDZ21_RS30710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013169049.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zinc-binding dehydrogenase
translation: MTAVPEFSRAAVLREFKAPLNIEEVPIPHEVEPSAALVKLEMSSICGTDIHLWQGSLSLKVNLPVIIGHEMVGRVVRAGAGVTTDSVGTPLKVGDRVVYTHTSCGGCFFCTTARKPTLCTNRRAYMYENIEEAPYLLGGFSQYGYILPQAGRLRVPNSLPNELASLSSCALRSVMNAFSQIGDIDPTETVVIQGAGPLGLLATANARVRGAKKIIVIGSPSARLKMAERFGGDVCIPVEGTTAQERLDAVLAQTEGRGADIVMEFTGVPAAFAEGLALARKGGRYLVVGQLGEATTTMAPSMIVKKNLQVFGSFSGDARSYSLALQFLEKHQHDFPFHEMITGRYTLDQVNIAMQRMKNFEEIKPVITID
SIO_010081: LDZ21_RS30710
subclass of: SO_0000673
so part of: LDZ21_RS30710
location: complement(113248..114360)
location: region:113248-114360:-1
so has part: feature:113248-114360:-1:exon

WP_244798023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113248-114360:-1:exon

LDZ21_RS30715
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30715
so part of: sequence
location: complement(114428..115873)
location: region:114428-115873:-1
so has part: feature:114428-115873:-1:exon
subclass of: SO_0000010

position:114428:-1
position: 114428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115873:-1
position: 115873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114428-115873:-1:exon

LDZ21_RS30715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30715
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008960869.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldehyde dehydrogenase family protein
translation: MPTEARTIFIAGEWSGAESRASLEVRSPIDGEVFAAISRGGKAEIDRAVAAARAALSGQWTTMAGFERGRIMSKLSALILDNTEELSQLEARDTGKPISQARTDIKATARYFEFYAGAADKVLGDVLPFLDGYQVTVQREARGVCGLIIPWNYPASMFGRTIGPALATGNTVVLKPAEDASMSCARLTALAHEAGLPAGVINLVTGLGEEAGAALSQHTDVDFLSFTGSPEVGTLIQTAAAKNHVPCVLELGGKSPQIVFEDADFEAAAKTIVSVTTQNAGQTCSAGSRVLIQRSIYDRFVAVLREKMTEVRVGAPSADLQCGPVINSTQQVKVKGFIERATSDGINVIAQGTLDKSAVATGYFVTPTLFGPVPVEHELAQDEVFGPVLAAIPFEDEGEAIAIANGTAYGLVAGLWTENGARQMRVAKKLRVGQVFINNYGAGGGIELPFGGVKRSGHGREKGLEALKEYTIAKTVVLKHG
SIO_010081: LDZ21_RS30715
subclass of: SO_0000673
so part of: LDZ21_RS30715
location: complement(114428..115873)
location: region:114428-115873:-1
so has part: feature:114428-115873:-1:exon

WP_244798024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114428-115873:-1:exon

LDZ21_RS30720
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30720
so part of: sequence
location: 116039..116950
location: region:116039-116950:1
so has part: feature:116039-116950:1:exon
subclass of: SO_0000010

position:116039:1
position: 116039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116950:1
position: 116950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116039-116950:1:exon

LDZ21_RS30720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006026423.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR substrate-binding domain-containing protein
translation: MDIRQMRYFVACVDAGSLSKAALALSISQPSLSQQIAEMEGDLGVPLLVRSYSGVAPTEAGTTFYRHAQSIIKQFAQMRGDVKRGEHALSGQVAVGLPTSVSSVLAVPLFERMRGRYPGIQLQIFESMSGYLNELLANGRLDIAVLFRETETRGVTVIPLFNERLAVHGAAWVGNPHGKTLPLEMLSDVPMVLPGRSHGLRLLVERAFESAGLSLNVVADIDSLPTMLELARRGEAATILSGFLGGHKSKDTPARYIVGPTLERSVALCRLNAVPQTAASRAVQDCMRALVVEMAPRLGSSPA
SIO_010081: LDZ21_RS30720
subclass of: SO_0000673
so part of: LDZ21_RS30720
location: 116039..116950
location: region:116039-116950:1
so has part: feature:116039-116950:1:exon

WP_244798025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116039-116950:1:exon

LDZ21_RS30725
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30725
so part of: sequence
location: 117117..118274
location: region:117117-118274:1
so has part: feature:117117-118274:1:exon
subclass of: SO_0000010

position:117117:1
position: 117117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118274:1
position: 118274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117117-118274:1:exon

LDZ21_RS30725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007596687.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CaiB/BaiF CoA-transferase family protein
translation: MSLPLSGVTVVSLEQAIAAPLASRHLADWGARIIKIERPGNGDFCRDYDTVMNGMSSQFVWTNRSKESVALDIKSPEGAEALFALLETADVFLQNLAPGAAARLGLDAKALVERFPRLIAVDISGYGSGGPYSKKKAYDLLVQCESGFLDINGSEAEPAKCGLAIADIATGMYALNGILMALYSRERTGRGTAFEVSLFDSMAEWMSYPAYYVGGSGKPLKRNGMRHATIAPYGPFRAGDGRRIFFGIQNEREWVSFCNVVLGDASIAVDPRFNCNPQRLVHRDALETLIEARFADWSSDEVLTRLDSAAIANARMNSVEEFVDHPQVLARKRTREVDSPTGPLTMFLPAITIAGVEPVMKRIPAVGEHTQRVLEEVTLRKRSVA
SIO_010081: LDZ21_RS30725
subclass of: SO_0000673
so part of: LDZ21_RS30725
location: 117117..118274
location: region:117117-118274:1
so has part: feature:117117-118274:1:exon

WP_244798026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117117-118274:1:exon

LDZ21_RS30730
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30730
so part of: sequence
location: 118271..119221
location: region:118271-119221:1
so has part: feature:118271-119221:1:exon
subclass of: SO_0000010

position:118271:1
position: 118271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119221:1
position: 119221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118271-119221:1:exon

LDZ21_RS30730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018453582.1
GO function: GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CoA ester lyase
translation: MSQAEDYRLTRTVLAAPANRRRHVESAARSTADAVFLDLEDAVPESEKADALQGAVSALQELDWGNKTVLVRLNAHGSRTVEDEIRTLSPLVRLDSLIVPKAERATHIEDITRMIVAAEGNARRAPLTLDLLIETALGLVMVDSLAQSSTRIAALHLGVGDFAGSIGARSAEIGGSPNGYRQTVARTEGCYVETPLDLFAYPMMRVLVAARAFGLRAIDGPCGAYRDATLTRAWAEKAAALGFDGKQVIHPSQIEATRDAFTPSAEDLAFATRVVDAMRQAESEGRGAVAVDGKMIDYANLRMAQRILMLGAADRH
SIO_010081: LDZ21_RS30730
subclass of: SO_0000673
so part of: LDZ21_RS30730
location: 118271..119221
location: region:118271-119221:1
so has part: feature:118271-119221:1:exon

WP_244798027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118271-119221:1:exon

LDZ21_RS30735
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30735
so part of: sequence
location: complement(119296..120018)
location: region:119296-120018:-1
so has part: feature:119296-120018:-1:exon
subclass of: SO_0000010

position:119296:-1
position: 119296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120018:-1
position: 120018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119296-120018:-1:exon

LDZ21_RS30735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019750927.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
translation: MGIGAETAEQLGKRGYHVVLADLNKENADDTAARLSAQELSASAIQMDVGKPDSIAAAFASIAKEHGRCDVLVNGAGIAKLVPFIDYPLDTFLTTMNVNVTGTLLCAQHAARMMVERRWGRIVNIASVAGMRAVGRGRTAYGTSKGAVIALTHQMAVELCDYGITANAVAPGPVDTPMTRTLHSDQFREEYSRAIPMKRYGTTSEIAAAICYLASDEAAYTNGVVLPVDGGFLSWGAGAV
SIO_010081: LDZ21_RS30735
subclass of: SO_0000673
so part of: LDZ21_RS30735
location: complement(119296..120018)
location: region:119296-120018:-1
so has part: feature:119296-120018:-1:exon

WP_244798078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119296-120018:-1:exon

LDZ21_RS30740
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30740
so part of: sequence
location: complement(120204..120539)
location: region:120204-120539:-1
so has part: feature:120204-120539:-1:exon
subclass of: SO_0000010

position:120204:-1
position: 120204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120539:-1
position: 120539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120204-120539:-1:exon

LDZ21_RS30740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30740
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLTLANALCIPDLRERARALPRIAFESFDHGGRTNRARKAALIGVSSRISRAPLGARSNDSAFSSTRWRPRLPRELVERGGRGYLAGMQRHIAARLSHLPAVIFTHNTLH
SIO_010081: LDZ21_RS30740
subclass of: SO_0000673
so part of: LDZ21_RS30740
location: complement(120204..120539)
location: region:120204-120539:-1
so has part: feature:120204-120539:-1:exon

WP_244798028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120204-120539:-1:exon

LDZ21_RS30745
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30745
so part of: sequence
location: complement(120559..120804)
location: region:120559-120804:-1
so has part: feature:120559-120804:-1:exon
subclass of: SO_0000010

position:120559:-1
position: 120559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120804:-1
position: 120804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120559-120804:-1:exon

LDZ21_RS30745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30745
inference: COORDINATES: protein motif:HMM:NF022188.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2520 domain-containing protein
translation: MSVEMWQAAGIPQLLIEDMLHTLTRNAAANVVALGPTDALTSPAARGIGRWSTRTRRQSAIGMRYRVKRTTHFRRSLRGLP
SIO_010081: LDZ21_RS30745
subclass of: SO_0000673
so part of: LDZ21_RS30745
location: complement(120559..120804)
location: region:120559-120804:-1
so has part: feature:120559-120804:-1:exon

WP_244798029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120559-120804:-1:exon

LDZ21_RS30750
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30750
so part of: sequence
location: complement(120914..121141)
location: region:120914-121141:-1
so has part: feature:120914-121141:-1:exon
subclass of: SO_0000010

position:120914:-1
position: 120914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121141:-1
position: 121141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120914-121141:-1:exon

LDZ21_RS30750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30750
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWELTVVGKGQRERTVPVSTATIDALRAHCADRAQDFDGATDDEQSGPLLAPVIIPWTDASRRRHREGRAVMGNR
SIO_010081: LDZ21_RS30750
subclass of: SO_0000673
so part of: LDZ21_RS30750
location: complement(120914..121141)
location: region:120914-121141:-1
so has part: feature:120914-121141:-1:exon

WP_244798030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120914-121141:-1:exon

LDZ21_RS30755
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30755
so part of: sequence
location: complement(121182..121952)
location: region:121182-121952:-1
so has part: feature:121182-121952:-1:exon
subclass of: SO_0000010

position:121182:-1
position: 121182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121952:-1
position: 121952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121182-121952:-1:exon

LDZ21_RS30755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30755
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPLVAAELIEVVPAAKVTGNGLNGSGQSGAAARPTLAPLERLAVPHGLSGAHGENRSTAFCYIQANHDLNAVRAYLNRYRDQPKMLRAYTKELERFLLWAVVLRGKALSDLRVDDCETYKDFLKSPDPRCIGERFARHSPRWRPFAGKLSSESQRYAVRVLRAAFAVDVRYLAGNPWTAVNDPVVIKRASAMKIERALPADLWRKLRGALDARSAEAGAVQGREAKSDVQWRAVRPAILLMGDSGLRREEASKCSA
SIO_010081: LDZ21_RS30755
subclass of: SO_0000673
so part of: LDZ21_RS30755
location: complement(121182..121952)
location: region:121182-121952:-1
so has part: feature:121182-121952:-1:exon

WP_244798031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121182-121952:-1:exon

LDZ21_RS30760
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30760
so part of: sequence
location: complement(121965..122588)
location: region:121965-122588:-1
so has part: feature:121965-122588:-1:exon
subclass of: SO_0000010

position:121965:-1
position: 121965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122588:-1
position: 122588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121965-122588:-1:exon

LDZ21_RS30760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30760
inference: COORDINATES: protein motif:HMM:NF023898.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage integrase family protein
translation: MTGSATIAERALSATERARQTPAPEKLTLERRYTTKDFAALRAYVQRIAPGVIARTYYDPDADPLAATPGAMERHLRAMLDTLVALALAHGSTALAEHPRASIRQHGHAKLTAVTFRMVTDAAQLAALPPHPDHPISAWLRPRVARRLKGEGSGDLGELVAFCNRRGGSWWRSIPRIGPGPGKGGGQLAATPRNPPEAARGRRRRLD
SIO_010081: LDZ21_RS30760
subclass of: SO_0000673
so part of: LDZ21_RS30760
location: complement(121965..122588)
location: region:121965-122588:-1
so has part: feature:121965-122588:-1:exon

WP_244798032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121965-122588:-1:exon

LDZ21_RS30765
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30765
so part of: sequence
location: complement(122563..123048)
location: region:122563-123048:-1
so has part: feature:122563-123048:-1:exon
subclass of: SO_0000010

position:122563:-1
position: 122563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123048:-1
position: 123048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122563-123048:-1:exon

LDZ21_RS30765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30765
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAQEFAADSDCGPFSDAEVARVVLALDHTIVRFRRAHALGHLVEGRTVPLPVKPTKIELAVFTSLAQTYGPALLDHADFIPVLDCIVEQGAVRLVQRSLWGERPDDVRLAARLLAARIPFEVLCGTWPDVFMGEAHAELQGFRPRPPDPRMESDDGERDDR
SIO_010081: LDZ21_RS30765
subclass of: SO_0000673
so part of: LDZ21_RS30765
location: complement(122563..123048)
location: region:122563-123048:-1
so has part: feature:122563-123048:-1:exon

WP_244798033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122563-123048:-1:exon

LDZ21_RS30770
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30770
so part of: sequence
location: complement(124113..124847)
location: region:124113-124847:-1
so has part: feature:124113-124847:-1:exon
subclass of: SO_0000010

position:124113:-1
position: 124113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124847:-1
position: 124847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124113-124847:-1:exon

LDZ21_RS30770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007735675.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MKKSKSLYHGHRFPAEVISCAVRWYFRFQLSLRDIEELLFERGVTVTYETIRCWCDKFGNGFAHRVKAARRKPGSTWHLDEMFVTLRGEPHLLWRAVDQHGAELDILLQKRRDKAAAKRFFKRVLRSSPVPRKIVTDQLRSYPAAKAEIPELANVKHVFVKAAARLNNRAENSHQPTRERERRMRGFRNPKRTQKFLSCFGPIRQHFALKRHLLRASLYRKQLEGRFVAWREFTGVTRNPSCAF
SIO_010081: LDZ21_RS30770
subclass of: SO_0000673
so part of: LDZ21_RS30770
location: complement(124113..124847)
location: region:124113-124847:-1
so has part: feature:124113-124847:-1:exon

WP_244798034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124113-124847:-1:exon

LDZ21_RS30775
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30775
pseudo: true
so part of: sequence
location: <125701..126537
location: region:125701-126537:1
so has part: feature:125701-126537:1:exon
subclass of: SO_0000010

position:125701:1
position: 125701
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:126537:1
position: 126537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125701-126537:1:exon

LDZ21_RS30775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30775
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013089215.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: error-prone DNA polymerase
SIO_010081: LDZ21_RS30775
subclass of: SO_0000673
so part of: LDZ21_RS30775
location: <125701..126537
location: region:125701-126537:1
so has part: feature:125701-126537:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:125701-126537:1:exon

LDZ21_RS30780
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30780
pseudo: true
so part of: sequence
location: 126838..>127038
location: region:126838-127038:1
so has part: feature:126838-127038:1:exon
subclass of: SO_0000010

position:126838:1
position: 126838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127038:1
position: 127038
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126838-127038:1:exon

LDZ21_RS30780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020704288.1
GO process: GO:0006457 - protein folding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: J domain-containing protein
SIO_010081: LDZ21_RS30780
subclass of: SO_0000673
so part of: LDZ21_RS30780
location: 126838..>127038
location: region:126838-127038:1
so has part: feature:126838-127038:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:126838-127038:1:exon

LDZ21_RS30785
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30785
pseudo: true
so part of: sequence
location: <127786..>128037
location: region:127786-128037:1
so has part: feature:127786-128037:1:exon
subclass of: SO_0000010

position:127786:1
position: 127786
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:128037:1
position: 128037
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127786-128037:1:exon

LDZ21_RS30785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006047862.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: energy transducer TonB
SIO_010081: LDZ21_RS30785
subclass of: SO_0000673
so part of: LDZ21_RS30785
location: <127786..>128037
location: region:127786-128037:1
so has part: feature:127786-128037:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:127786-128037:1:exon

LDZ21_RS30790
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30790
so part of: sequence
location: 128619..129029
location: region:128619-129029:1
so has part: feature:128619-129029:1:exon
subclass of: SO_0000010

position:128619:1
position: 128619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129029:1
position: 129029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128619-129029:1:exon

LDZ21_RS30790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020308560.1
GO function: GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PH domain-containing protein
translation: MGYVAANLVAGEQVIYEGKLSLWKFLPRITIGVILVPVFLLGLLVLLDVLITYKTTELAITNRRVIAKFGFIRRHAIEIDVRRVESIQVNQGILGRIFDFGSIMLSGAGNPLAPIPGVSAPMTFRKQFLEHQALLA
SIO_010081: LDZ21_RS30790
subclass of: SO_0000673
so part of: LDZ21_RS30790
location: 128619..129029
location: region:128619-129029:1
so has part: feature:128619-129029:1:exon

WP_244798035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128619-129029:1:exon

LDZ21_RS30795
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30795
so part of: sequence
location: complement(129360..129764)
location: region:129360-129764:-1
so has part: feature:129360-129764:-1:exon
subclass of: SO_0000010

position:129360:-1
position: 129360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129764:-1
position: 129764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129360-129764:-1:exon

LDZ21_RS30795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30795
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIELITNNKRENIILFVHGFTGGKETWKHPKSGYFFDQLQQFDLVQKRFDIAVYEYFSTLSNLLADTSSMIGRVLRAITRAAGSTSLRRATRSVSRPSAEISADSGKSSKQTAGFYVSDEVVALALDVESLDVA
SIO_010081: LDZ21_RS30795
subclass of: SO_0000673
so part of: LDZ21_RS30795
location: complement(129360..129764)
location: region:129360-129764:-1
so has part: feature:129360-129764:-1:exon

WP_244798036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129360-129764:-1:exon

LDZ21_RS30800
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30800
so part of: sequence
location: complement(129817..130116)
location: region:129817-130116:-1
so has part: feature:129817-130116:-1:exon
subclass of: SO_0000010

position:129817:-1
position: 129817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130116:-1
position: 130116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129817-130116:-1:exon

LDZ21_RS30800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009770831.1
GO function: GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO process: GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MKSFVLSPAAEVDLDEIWDYSIENWGERQAERYIRMIQDTIIGLADGTQLSHSAEHVRPNYRKVLVGSHVLFFKEDQQVVDVIRILHQRMDSSFHLNEH
SIO_010081: LDZ21_RS30800
subclass of: SO_0000673
so part of: LDZ21_RS30800
location: complement(129817..130116)
location: region:129817-130116:-1
so has part: feature:129817-130116:-1:exon

WP_244798037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129817-130116:-1:exon

LDZ21_RS30805
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30805
so part of: sequence
location: complement(130113..130355)
location: region:130113-130355:-1
so has part: feature:130113-130355:-1:exon
subclass of: SO_0000010

position:130113:-1
position: 130113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130355:-1
position: 130355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130113-130355:-1:exon

LDZ21_RS30805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009770832.1
GO process: GO:0051983 - regulation of chromosome segregation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system ParD family antitoxin
translation: MGKNTSVSLGDHFADFVEDRVRGGRYNTASDVVRAGLRLLEEHEARLDVLRAELEKGERSGESRPFDFDAFLTRKRKLAT
SIO_010081: LDZ21_RS30805
subclass of: SO_0000673
so part of: LDZ21_RS30805
location: complement(130113..130355)
location: region:130113-130355:-1
so has part: feature:130113-130355:-1:exon

WP_244798038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130113-130355:-1:exon

LDZ21_RS30810
type: Gene
subclass of: SO_0000704
RO_0002162: 1071679
locus tag: LDZ21_RS30810
so part of: sequence
location: complement(130765..131160)
location: region:130765-131160:-1
so has part: feature:130765-131160:-1:exon
subclass of: SO_0000010

position:130765:-1
position: 130765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131160:-1
position: 131160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130765-131160:-1:exon

LDZ21_RS30810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1071679
locus tag: LDZ21_RS30810
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MVAPVIIPWTDASRRRHRTEQGGDASRISEAGYTADGLNRLIGRMLNELVKTMDSIDLGDRMRLGQANAHPFRHTFGTQSVADDVPVDVVQKVLGHASLQTTTIYVQAEKRRVLEQVAEYYARRATETTGR
SIO_010081: LDZ21_RS30810
subclass of: SO_0000673
so part of: LDZ21_RS30810
location: complement(130765..131160)
location: region:130765-131160:-1
so has part: feature:130765-131160:-1:exon

WP_244798039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130765-131160:-1:exon