Tetrapisispora phaffii CBS 4417 chromosome 13, complete genome.
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Tetrapisispora.
Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents
Submitted (02-JUN-2017) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (14-NOV-2011) Smurfit Institute of Genetics, Trinity College Dublin, College Green, Dublin 2, IRELAND
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to HE612868.\nAccession numbers for all the chromosomes/scaffold in this genome\nproject: HE612856-HE612872.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##
incomplete silenced copy of a1 at HMRa-1 locus
similar to Saccharomyces cerevisiae ACM1 (YPL267W); ancestral locus Anc_6.2
similar to Saccharomyces cerevisiae KAR9 (YPL269W); ancestral locus Anc_6.4
similar to Saccharomyces cerevisiae YPL272C; ancestral locus Anc_6.8
similar to Saccharomyces cerevisiae HAT2 (YEL056W); ancestral locus Anc_6.9
similar to Saccharomyces cerevisiae KEL3 (YPL263C); ancestral locus Anc_6.10
similar to Saccharomyces cerevisiae PCM1 (YEL058W); ancestral locus Anc_6.11
similar to Saccharomyces cerevisiae SOM1 (YEL059C-A); ancestral locus Anc_6.12
similar to DNA sequence:INSDC:YEL060C,YOR003W
similar to Saccharomyces cerevisiae PRB1 (YEL060C) and YSP3 (YOR003W); ancestral locus Anc_6.14
similar to Saccharomyces cerevisiae CIN8 (YEL061C); ancestral locus Anc_6.16
similar to Saccharomyces cerevisiae DNL4 (YOR005C); ancestral locus Anc_6.18
similar to Saccharomyces cerevisiae SGT2 (YOR007C); ancestral locus Anc_6.21
similar to Saccharomyces cerevisiae IZH2 (YOL002C); ancestral locus Anc_6.27
similar to Saccharomyces cerevisiae MPS1 (YDL028C); ancestral locus Anc_3.162
similar to Saccharomyces cerevisiae DBP10 (YDL031W); ancestral locus Anc_3.159
similar to Saccharomyces cerevisiae MET22 (YOL064C); ancestral locus Anc_3.157
similar to Saccharomyces cerevisiae GPR1 (YDL035C); ancestral locus Anc_3.156
similar to DNA sequence:INSDC:YDL036C,YOL066C
similar to Saccharomyces cerevisiae PUS9 (YDL036C) and RIB2 (YOL066C); ancestral locus Anc_3.154
similar to Saccharomyces cerevisiae NAT1 (YDL040C); ancestral locus Anc_3.153
similar to Saccharomyces cerevisiae RTG1 (YOL067C); ancestral locus Anc_3.152
similar to DNA sequence:INSDC:YDL042C,YOL068C
similar to Saccharomyces cerevisiae SIR2 (YDL042C) and HST1 (YOL068C); ancestral locus Anc_3.151
similar to Saccharomyces cerevisiae PRP11 (YDL043C); ancestral locus Anc_3.150
similar to Saccharomyces cerevisiae NUF2 (YOL069W); ancestral locus Anc_3.149
similar to Saccharomyces cerevisiae YOL070C; ancestral locus Anc_3.148
similar to Saccharomyces cerevisiae MTF2 (YDL044C); ancestral locus Anc_3.147
similar to Saccharomyces cerevisiae FAD1 (YDL045C); ancestral locus Anc_3.146
mitochondrial 37S ribosomal protein YmS-T
similar to Saccharomyces cerevisiae MRP10 (YDL045W-A); ancestral locus Anc_3.145
similar to Saccharomyces cerevisiae EMI5 (YOL071W); ancestral locus Anc_3.144
similar to Saccharomyces cerevisiae NPC2 (YDL046W); ancestral locus Anc_3.143
similar to Saccharomyces cerevisiae SIT4 (YDL047W); ancestral locus Anc_3.142
similar to Saccharomyces cerevisiae THP1 (YOL072W); ancestral locus Anc_3.141
similar to Saccharomyces cerevisiae UPF3 (YGR072W); ancestral locus Anc_3.140
similar to Saccharomyces cerevisiae PRP38 (YGR075C); ancestral locus Anc_3.138
mitochondrial 54S ribosomal protein YmL25
similar to Saccharomyces cerevisiae MRPL25 (YGR076C); ancestral locus Anc_3.137
similar to Saccharomyces cerevisiae PEX8 (YGR077C); ancestral locus Anc_3.136
similar to Saccharomyces cerevisiae YOL073C; ancestral locus Anc_3.135
similar to Saccharomyces cerevisiae PAC10 (YGR078C); ancestral locus Anc_3.134
similar to Saccharomyces cerevisiae PDX3 (YBR035C); ancestral locus Anc_3.236
similar to DNA sequence:INSDC:YBR031W,YDR012W
similar to Saccharomyces cerevisiae RPL4A (YBR031W) and RPL4B (YDR012W); ancestral locus Anc_3.232
similar to Saccharomyces cerevisiae YBR030W; ancestral locus Anc_3.231
similar to Saccharomyces cerevisiae ETR1 (YBR026C); ancestral locus Anc_3.228
similar to Saccharomyces cerevisiae OLA1 (YBR025C); ancestral locus Anc_3.226
similar to Saccharomyces cerevisiae CHS2 (YBR038W); ancestral locus Anc_3.224
similar to Saccharomyces cerevisiae CHS3 (YBR023C); ancestral locus Anc_3.223
similar to Saccharomyces cerevisiae FUR4 (YBR021W); ancestral locus Anc_3.221
similar to Saccharomyces cerevisiae SNQ2 (YDR011W); ancestral locus Anc_3.220
similar to DNA sequence:INSDC:YBR020W,YDR009W
similar to Saccharomyces cerevisiae GAL1 (YBR020W) and GAL3 (YDR009W); ancestral locus Anc_3.219
similar to Saccharomyces cerevisiae GAL10 (YBR019C); ancestral locus Anc_3.218
similar to Saccharomyces cerevisiae MPD2 (YOL088C); ancestral locus Anc_3.111
similar to Saccharomyces cerevisiae SPP381 (YBR152W); ancestral locus Anc_3.112
similar to Saccharomyces cerevisiae RPB5 (YBR154C); ancestral locus Anc_3.114
similar to Saccharomyces cerevisiae YOL087C; ancestral locus Anc_3.115
similar to Saccharomyces cerevisiae YOL086W-A; ancestral locus Anc_3.116
mitochondrial 37S ribosomal protein MRPS9
similar to Saccharomyces cerevisiae MRPS9 (YBR146W); ancestral locus Anc_3.117
similar to DNA sequence:INSDC:YBR145W,YOL086C
similar to Saccharomyces cerevisiae ADH5 (YBR145W) and ADH1 (YOL086C); ancestral locus Anc_3.118
similar to Saccharomyces cerevisiae SUP45 (YBR143C); ancestral locus Anc_3.121
similar to Saccharomyces cerevisiae MAK5 (YBR142W); ancestral locus Anc_3.122
similar to Saccharomyces cerevisiae YBR141C; ancestral locus Anc_3.123
similar to DNA sequence:INSDC:YBR140C,YOL081W
similar to Saccharomyces cerevisiae IRA1 (YBR140C) and IRA2 (YOL081W); ancestral locus Anc_3.124
similar to Saccharomyces cerevisiae ATP19 (YOL077W-A); ancestral locus Anc_3.128
similar to Saccharomyces cerevisiae MDM20 (YOL076W); ancestral locus Anc_3.130
similar to Saccharomyces cerevisiae YBR138C; ancestral locus Anc_3.131
similar to Saccharomyces cerevisiae PSF1 (YDR013W); ancestral locus Anc_3.234
similar to Saccharomyces cerevisiae RAD61 (YDR014W); ancestral locus Anc_3.235
similar to Saccharomyces cerevisiae YPL279C; ancestral locus Anc_3.237
similar to Saccharomyces cerevisiae HED1 (YDR014W-A); ancestral locus Anc_3.238
similar to Saccharomyces cerevisiae ATP3 (YBR039W); ancestral locus Anc_3.241
similar to Saccharomyces cerevisiae FAT1 (YBR041W); ancestral locus Anc_3.243
similar to DNA sequence:INSDC:YBR042C,YDR018C
similar to Saccharomyces cerevisiae CST26 (YBR042C) and YDR018C; ancestral locus Anc_3.244
similar to Saccharomyces cerevisiae GCV1 (YDR019C); ancestral locus Anc_3.246
similar to Saccharomyces cerevisiae YDR020C; ancestral locus Anc_3.248
similar to Saccharomyces cerevisiae FAL1 (YDR021W); ancestral locus Anc_3.249
similar to Saccharomyces cerevisiae CIS1 (YDR022C); ancestral locus Anc_3.250
similar to Saccharomyces cerevisiae GIP1 (YBR045C); ancestral locus Anc_3.252
similar to Saccharomyces cerevisiae ZTA1 (YBR046C); ancestral locus Anc_3.253
similar to DNA sequence:INSDC:YBR048W,YDR025W
similar to Saccharomyces cerevisiae RPS11B (YBR048W) and RPS11A (YDR025W); ancestral locus Anc_3.255
similar to DNA sequence:INSDC:YBR049C,YDR026C
similar to Saccharomyces cerevisiae REB1 (YBR049C) and YDR026C; ancestral locus Anc_3.256
similar to Saccharomyces cerevisiae VPS54 (YDR027C); ancestral locus Anc_3.257
similar to DNA sequence:INSDC:YDR028C,YBR050C
similar to Saccharomyces cerevisiae REG1 (YDR028C) and REG2 (YBR050C); ancestral locus Anc_3.258
similar to Saccharomyces cerevisiae RAD28 (YDR030C); ancestral locus Anc_3.259
similar to Saccharomyces cerevisiae MIC14 (YDR031W); ancestral locus Anc_3.260
similar to DNA sequence:INSDC:YBR052C,YDR032C
similar to Saccharomyces cerevisiae RFS1 (YBR052C) and PST2 (YDR032C); ancestral locus Anc_3.261
similar to Saccharomyces cerevisiae YBR053C; ancestral locus Anc_3.262
similar to DNA sequence:INSDC:YBR054W,YDR033W
similar to Saccharomyces cerevisiae YRO2 (YBR054W) and MRH1 (YDR033W); ancestral locus Anc_3.263
similar to Saccharomyces cerevisiae LYS14 (YDR034C); ancestral locus Anc_3.264
similar to Saccharomyces cerevisiae PRP6 (YBR055C); ancestral locus Anc_3.265
similar to Saccharomyces cerevisiae YBR056W; ancestral locus Anc_3.266
similar to DNA sequence:INSDC:YDR034W-B,YBR056W-A
similar to Saccharomyces cerevisiae YDR034W-B and YBR056W-A; ancestral locus Anc_3.267
similar to Saccharomyces cerevisiae ARO3 (YDR035W); ancestral locus Anc_3.268
similar to Saccharomyces cerevisiae MUM2 (YBR057C); ancestral locus Anc_3.269
similar to Saccharomyces cerevisiae UBP14 (YBR058C); ancestral locus Anc_3.270
similar to Saccharomyces cerevisiae EHD3 (YDR036C); ancestral locus Anc_3.271
similar to Saccharomyces cerevisiae TSC3 (YBR058C-A); ancestral locus Anc_3.272
similar to Saccharomyces cerevisiae AKL1 (YBR059C); ancestral locus Anc_3.273
similar to Saccharomyces cerevisiae ORC2 (YBR060C); ancestral locus Anc_3.274
similar to Saccharomyces cerevisiae TRM7 (YBR061C); ancestral locus Anc_3.277
similar to Saccharomyces cerevisiae RSM10 (YDR041W); ancestral locus Anc_3.278
similar to Saccharomyces cerevisiae ECM2 (YBR065C); ancestral locus Anc_3.280
similar to DNA sequence:INSDC:YBR066C,YDR043C
similar to Saccharomyces cerevisiae NRG2 (YBR066C) and NRG1 (YDR043C); ancestral locus Anc_3.281
similar to Saccharomyces cerevisiae RPC11 (YDR045C); ancestral locus Anc_3.283
similar to DNA sequence:INSDC:YBR068C,YDR046C
similar to Saccharomyces cerevisiae BAP2 (YBR068C) and BAP3 (YDR046C); ancestral locus Anc_3.284
similar to Saccharomyces cerevisiae TPI1 (YDR050C); ancestral locus Anc_3.288
similar to Saccharomyces cerevisiae YBR071W; ancestral locus Anc_3.290
similar to Saccharomyces cerevisiae RDH54 (YBR073W); ancestral locus Anc_3.292
similar to Saccharomyces cerevisiae HEM12 (YDR047W); ancestral locus Anc_3.294
similar to Saccharomyces cerevisiae ECM8 (YBR076W); ancestral locus Anc_3.297
similar to Saccharomyces cerevisiae DBF4 (YDR052C); ancestral locus Anc_3.299
similar to Saccharomyces cerevisiae SLM4 (YBR077C); ancestral locus Anc_3.300
similar to Saccharomyces cerevisiae CDC34 (YDR054C); ancestral locus Anc_3.301
similar to DNA sequence:INSDC:YBR078W,YDR055W
similar to Saccharomyces cerevisiae ECM33 (YBR078W) and PST1 (YDR055W); ancestral locus Anc_3.302
similar to Saccharomyces cerevisiae RPG1 (YBR079C); ancestral locus Anc_3.303
similar to Saccharomyces cerevisiae YOS9 (YDR057W); ancestral locus Anc_3.306
similar to Saccharomyces cerevisiae TEC1 (YBR083W); ancestral locus Anc_3.310
similar to DNA sequence:INSDC:YBL027W,YBR084C-A
similar to Saccharomyces cerevisiae RPL19B (YBL027W) and RPL19A (YBR084C-A); ancestral locus Anc_3.312
similar to Saccharomyces cerevisiae YBL028C; ancestral locus Anc_3.313
similar to Saccharomyces cerevisiae YBL029W; ancestral locus Anc_3.314
similar to DNA sequence:INSDC:YBL030C,YBR085W
similar to Saccharomyces cerevisiae PET9 (YBL030C) and AAC3 (YBR085W); ancestral locus Anc_3.316
similar to Saccharomyces cerevisiae HEK2 (YBL032W); ancestral locus Anc_3.318
similar to Saccharomyces cerevisiae RIB1 (YBL033C); ancestral locus Anc_3.319
similar to Saccharomyces cerevisiae STU1 (YBL034C); ancestral locus Anc_3.321
similar to Saccharomyces cerevisiae POL12 (YBL035C); ancestral locus Anc_3.322
similar to Saccharomyces cerevisiae IST2 (YBR086C); ancestral locus Anc_3.323
similar to Saccharomyces cerevisiae YBL036C; ancestral locus Anc_3.324
similar to Saccharomyces cerevisiae RFC5 (YBR087W); ancestral locus Anc_3.326
mitochondrial 54S ribosomal protein YmL47
similar to Saccharomyces cerevisiae MRPL16 (YBL038W); ancestral locus Anc_3.327
similar to Saccharomyces cerevisiae MSF1 (YPR047W); ancestral locus Anc_3.328
similar to Saccharomyces cerevisiae TAH18 (YPR048W); ancestral locus Anc_3.329
similar to Saccharomyces cerevisiae POL30 (YBR088C); ancestral locus Anc_3.332
similar to DNA sequence:INSDC:YBR089C-A,YPR052C
similar to Saccharomyces cerevisiae NHP6B (YBR089C-A) and NHP6A (YPR052C); ancestral locus Anc_3.333
similar to Saccharomyces cerevisiae RXT2 (YBR095C); ancestral locus Anc_3.336
similar to Saccharomyces cerevisiae SMK1 (YPR054W); ancestral locus Anc_3.338
similar to Saccharomyces cerevisiae SEC8 (YPR055W); ancestral locus Anc_3.340
similar to Saccharomyces cerevisiae MMS4 (YBR098W); ancestral locus Anc_3.341
similar to Saccharomyces cerevisiae FES1 (YBR101C); ancestral locus Anc_3.342
similar to Saccharomyces cerevisiae BRR1 (YPR057W); ancestral locus Anc_3.347
similar to DNA sequence:INSDC:YBR104W,YPR058W
similar to Saccharomyces cerevisiae YMC2 (YBR104W) and YMC1 (YPR058W); ancestral locus Anc_3.348
similar to Saccharomyces cerevisiae ARO7 (YPR060C); ancestral locus Anc_3.349
similar to Saccharomyces cerevisiae JID1 (YPR061C); ancestral locus Anc_3.350
similar to Saccharomyces cerevisiae CMD1 (YBR109C); ancestral locus Anc_3.360
similar to Saccharomyces cerevisiae HOS1 (YPR068C); ancestral locus Anc_3.362
similar to Saccharomyces cerevisiae MED1 (YPR070W); ancestral locus Anc_3.364
similar to Saccharomyces cerevisiae YSA1 (YBR111C); ancestral locus Anc_3.365
similar to Saccharomyces cerevisiae SUS1 (YBR111W-A); ancestral locus Anc_3.366
similar to Saccharomyces cerevisiae CYC8 (YBR112C); ancestral locus Anc_3.367
similar to Saccharomyces cerevisiae LTP1 (YPR073C); ancestral locus Anc_3.371
similar to DNA sequence:INSDC:YBR117C,YPR074C
similar to Saccharomyces cerevisiae TKL2 (YBR117C) and TKL1 (YPR074C); ancestral locus Anc_3.372
similar to Saccharomyces cerevisiae YGR079W; ancestral locus Anc_3.403
similar to Saccharomyces cerevisiae YPR097W; ancestral locus Anc_3.408
similar to Saccharomyces cerevisiae SLX9 (YGR081C); ancestral locus Anc_3.409
similar to Saccharomyces cerevisiae TOM20 (YGR082W); ancestral locus Anc_3.410
similar to Saccharomyces cerevisiae YPR098C; ancestral locus Anc_3.411
similar to Saccharomyces cerevisiae MRP13 (YGR084C); ancestral locus Anc_3.414
similar to Saccharomyces cerevisiae SNT309 (YPR101W); ancestral locus Anc_3.415
similar to DNA sequence:INSDC:YGR085C,YPR102C
similar to Saccharomyces cerevisiae RPL11B (YGR085C) and RPL11A (YPR102C); ancestral locus Anc_3.416
similar to Saccharomyces cerevisiae PRE2 (YPR103W); ancestral locus Anc_3.417
similar to Saccharomyces cerevisiae FHL1 (YPR104C); ancestral locus Anc_3.418
similar to Saccharomyces cerevisiae YTH1 (YPR107C); ancestral locus Anc_3.422
similar to Saccharomyces cerevisiae NNF2 (YGR089W); ancestral locus Anc_3.425
similar to Saccharomyces cerevisiae BUD17 (YNR027W); ancestral locus Anc_6.334
similar to Saccharomyces cerevisiae ATG15 (YCR068W); ancestral locus Anc_6.335
similar to DNA sequence:INSDC:YCR069W,YNR028W
similar to Saccharomyces cerevisiae CPR4 (YCR069W) and CPR8 (YNR028W); ancestral locus Anc_6.336
similar to Saccharomyces cerevisiae ALG12 (YNR030W); ancestral locus Anc_6.338
similar to Saccharomyces cerevisiae RSA4 (YCR072C); ancestral locus Anc_6.340
similar to DNA sequence:INSDC:YCR073C,YNR031C
similar to Saccharomyces cerevisiae SSK22 (YCR073C) and SSK2 (YNR031C); ancestral locus Anc_6.341
similar to Saccharomyces cerevisiae PPG1 (YNR032W); ancestral locus Anc_6.342
similar to Saccharomyces cerevisiae ABZ1 (YNR033W); ancestral locus Anc_6.344
similar to DNA sequence:INSDC:YNR034W-A,YCR075W-A
similar to Saccharomyces cerevisiae YNR034W-A and YCR075W-A; ancestral locus Anc_6.348
similar to Saccharomyces cerevisiae YCR076C; ancestral locus Anc_6.349
similar to Saccharomyces cerevisiae PAT1 (YCR077C); ancestral locus Anc_6.350
putative mitochondrial 37S ribosomal protein MRPS12
similar to Saccharomyces cerevisiae YNR036C; ancestral locus Anc_6.352
similar to Saccharomyces cerevisiae PTC6 (YCR079W); ancestral locus Anc_6.353
mitochondrial 37S ribosomal protein RSM19
similar to Saccharomyces cerevisiae RSM19 (YNR037C); ancestral locus Anc_6.354
similar to Saccharomyces cerevisiae DBP6 (YNR038W); ancestral locus Anc_6.355
similar to Saccharomyces cerevisiae SRB8 (YCR081W); ancestral locus Anc_6.356
similar to Saccharomyces cerevisiae AHC2 (YCR082W); ancestral locus Anc_6.358
similar to Saccharomyces cerevisiae YNR040W; ancestral locus Anc_6.360
similar to Saccharomyces cerevisiae COQ2 (YNR041C); ancestral locus Anc_6.361
similar to Saccharomyces cerevisiae MVD1 (YNR043W); ancestral locus Anc_6.362
similar to Saccharomyces cerevisiae TUP1 (YCR084C); ancestral locus Anc_6.363
similar to Saccharomyces cerevisiae CSM1 (YCR086W); ancestral locus Anc_6.364
similar to Saccharomyces cerevisiae YCR087C-A; ancestral locus Anc_6.365
similar to DNA sequence:INSDC:YCR089W,YNR044W
similar to Saccharomyces cerevisiae FIG2 (YCR089W) and AGA1 (YNR044W); ancestral locus Anc_6.367
similar to Saccharomyces cerevisiae YCR090C; ancestral locus Anc_6.368
similar to Saccharomyces cerevisiae PET494 (YNR045W); ancestral locus Anc_6.369
similar to Saccharomyces cerevisiae TRM112 (YNR046W); ancestral locus Anc_6.370
similar to DNA sequence:INSDC:YCR091W,YNR047W
similar to Saccharomyces cerevisiae KIN82 (YCR091W) and YNR047W; ancestral locus Anc_6.371
similar to Saccharomyces cerevisiae CDC39 (YCR093W); ancestral locus Anc_6.373
similar to DNA sequence:INSDC:YCR094W,YNR048W
similar to Saccharomyces cerevisiae CDC50 (YCR094W) and YNR048W; ancestral locus Anc_6.374
similar to Saccharomyces cerevisiae MSO1 (YNR049C); ancestral locus Anc_6.375
similar to Saccharomyces cerevisiae LYS9 (YNR050C); ancestral locus Anc_6.376
similar to Saccharomyces cerevisiae YCR095C; ancestral locus Anc_6.377
similar to Saccharomyces cerevisiae BRE5 (YNR051C); ancestral locus Anc_6.378
similar to Saccharomyces cerevisiae POP2 (YNR052C); ancestral locus Anc_6.379