Candidatus Gullanella endobia isolate GEFVIR chromosome I, complete sequence.
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Candidatus Gullanella.
Submitted (18-JAN-2016) UNIVERSITY OF SOUTH BOHEMIA, Branisovska 31, Czech Republic
REFSEQ INFORMATION: The reference sequence is identical to\nLN999832.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/24/2022 02:52:33\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 528\nCDSs (total) :: 483\nGenes (coding) :: 465\nCDSs (with protein) :: 465\nGenes (RNA) :: 45\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 39\nncRNAs :: 3\nPseudo Genes (total) :: 18\nCDSs (without protein) :: 18\nPseudo Genes (ambiguous residues) :: 0 of 18\nPseudo Genes (frameshifted) :: 10 of 18\nPseudo Genes (incomplete) :: 9 of 18\nPseudo Genes (internal stop) :: 7 of 18\nPseudo Genes (multiple problems) :: 8 of 18\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:YP_005228266.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004104575.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002214829.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002209680.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411608.1
GO:0033856 - pyridoxine 5'-phosphate synthase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411607.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019077403.1
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000919160.1
COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1
GO:0008934 - inositol monophosphate 1-phosphatase activity [Evidence IEA]
GO:0046855 - inositol phosphate dephosphorylation [Evidence IEA]; GO:0046854 - phosphatidylinositol phosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019106083.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0044571 - [2Fe-2S] cluster assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017383539.1
GO:0030145 - manganese ion binding [Evidence IEA]; GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
GO:0019538 - protein metabolic process [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015854423.1
catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF008109.0
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011094740.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411582.1
COORDINATES: similar to AA sequence:RefSeq:WP_011411581.1
GO:0005515 - protein binding [Evidence IEA]
outer membrane protein assembly factor BamB
COORDINATES: similar to AA sequence:RefSeq:WP_014698963.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_008455510.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
GO:0006268 - DNA unwinding involved in DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011412137.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]; GO:0051604 - protein maturation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005121637.1
GO:0008658 - penicillin binding [Evidence IEA]
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA
COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1
COORDINATES: similar to AA sequence:RefSeq:WP_012147278.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015962192.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011412099.1
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
FKBP-type peptidyl-prolyl cis-trans isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_011412097.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002212321.1
COORDINATES: similar to AA sequence:RefSeq:WP_016930327.1
GO:0002143 - tRNA wobble position uridine thiolation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:YP_005229177.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1
COORDINATES: similar to AA sequence:RefSeq:WP_011412092.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:NP_312930.1
COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1
COORDINATES: similar to AA sequence:RefSeq:WP_004953928.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002445278.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004387079.1
COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011409999.1
DNA-directed RNA polymerase subunit beta'
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_002221132.1
COORDINATES: similar to AA sequence:RefSeq:WP_004957764.1
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:YP_005224513.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1
COORDINATES: similar to AA sequence:RefSeq:WP_002211383.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: protein motif:HMM:NF024754.2
COORDINATES: similar to AA sequence:RefSeq:WP_011411681.1
GO:0043867 - 7-cyano-7-deazaguanine tRNA-ribosyltransferase activity [Evidence IEA]; GO:0033739 - preQ1 synthase activity [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
NADPH-dependent 7-cyano-7-deazaguanine reductase QueF
COORDINATES: similar to AA sequence:RefSeq:WP_011411675.1
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1
COORDINATES: similar to AA sequence:RefSeq:WP_015873750.1
COORDINATES: similar to AA sequence:RefSeq:WP_011411672.1
GO:0033862 - UMP kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411671.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013975714.1
GO:0008834 - di-trans,poly-cis-decaprenylcistransferase activity [Evidence IEA]; GO:0002094 - polyprenyltransferase activity [Evidence IEA]
GO:0043164 - Gram-negative-bacterium-type cell wall biogenesis [Evidence IEA]
(2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_008456935.1
GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019844313.1
GO:0009279 - cell outer membrane [Evidence IEA]
outer membrane protein assembly factor BamA
COORDINATES: similar to AA sequence:RefSeq:WP_002212140.1
GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004959243.1
GO:0016410 - N-acyltransferase activity [Evidence IEA]
GO:0009245 - lipid A biosynthetic process [Evidence IEA]
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012987198.1
COORDINATES: similar to AA sequence:RefSeq:WP_011282829.1
GO:0008780 - acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity [Evidence IEA]
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011411661.1
GO:0008915 - lipid-A-disaccharide synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:NP_308213.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019455765.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
acetyl-CoA carboxylase carboxyl transferase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011411657.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411651.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012005354.1
GO:0004416 - hydroxyacylglutathione hydrolase activity [Evidence IEA]
GO:0019243 - methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410344.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014889009.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011092713.1
GO:0051075 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: similar to AA sequence:RefSeq:WP_017371389.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005166605.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010282064.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004393185.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
transcription antitermination factor NusB
COORDINATES: similar to AA sequence:RefSeq:WP_011410408.1
GO:0008962 - phosphatidylglycerophosphatase activity [Evidence IEA]
GO:0006629 - lipid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017891827.1
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012770740.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
ATP-dependent protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410538.1
COORDINATES: similar to AA sequence:RefSeq:WP_011410539.1
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_003850426.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1
GO:0008150 - biological_process [Evidence IEA]
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_001195015.1
COORDINATES: similar to AA sequence:RefSeq:WP_011147975.1
GO:0004017 - adenylate kinase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004714620.1
GO:0004325 - ferrochelatase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014889042.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004244247.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:YP_005225533.1
GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
COORDINATES: similar to AA sequence:RefSeq:WP_005191199.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008815689.1
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: similar to AA sequence:RefSeq:WP_015848444.1
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1
COORDINATES: similar to AA sequence:RefSeq:WP_011411825.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1
COORDINATES: protein motif:HMM:TIGR00548.1
GO:0008320 - protein transmembrane transporter activity [Evidence IEA]
lipoprotein insertase outer membrane protein LolB
COORDINATES: similar to AA sequence:RefSeq:WP_013975649.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017892488.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011411817.1
GO:0008676 - 3-deoxy-8-phosphooctulonate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014499287.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1
COORDINATES: similar to AA sequence:RefSeq:WP_011411241.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_016266158.1
COORDINATES: similar to AA sequence:RefSeq:WP_016169857.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0075713 - establishment of integrated proviral latency [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0006417 - regulation of translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013975751.1
COORDINATES: similar to AA sequence:RefSeq:WP_006118972.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008911479.1
COORDINATES: similar to AA sequence:RefSeq:WP_014887813.1
COORDINATES: similar to AA sequence:RefSeq:WP_004943711.1
GO:0006534 - cysteine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411256.1
COORDINATES: similar to AA sequence:RefSeq:NP_460343.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009112939.1
GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014887883.1
GO:0016896 - exoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO:0006364 - rRNA processing [Evidence IEA]; GO:0042780 - tRNA 3'-end processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020884327.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015570668.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013576192.1
COORDINATES: similar to AA sequence:RefSeq:WP_014889104.1
PTS mannose/fructose/sorbose transporter subunit IIC
COORDINATES: similar to AA sequence:RefSeq:WP_011411155.1
GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014888071.1
COORDINATES: similar to AA sequence:RefSeq:WP_011411160.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_015840174.1
GO:0032955 - regulation of division septum assembly [Evidence IEA]
cell division topological specificity factor MinE
COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1
COORDINATES: similar to AA sequence:RefSeq:WP_011411164.1
GO:0004857 - enzyme inhibitor activity [Evidence IEA]
GO:0000918 - division septum site selection [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003833563.1
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411171.1
GO:0005451 - monovalent cation:proton antiporter activity [Evidence IEA]
GO:0006884 - cell volume homeostasis [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014888145.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_017893059.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]; GO:0008853 - exodeoxyribonuclease III activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:YP_005227498.1
histone-like nucleoid-structuring protein H-NS
COORDINATES: similar to AA sequence:RefSeq:WP_012304089.1
GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411203.1
COORDINATES: similar to AA sequence:RefSeq:WP_015378069.1
GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019083174.1
COORDINATES: similar to AA sequence:RefSeq:WP_005191551.1
GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]; GO:0004640 - phosphoribosylanthranilate isomerase activity [Evidence IEA]
GO:0006568 - tryptophan metabolic process [Evidence IEA]
bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF
COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD
COORDINATES: similar to AA sequence:RefSeq:WP_005968669.1
GO:0004049 - anthranilate synthase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF007976.0
GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]
23S rRNA pseudouridine(2605) synthase RluB
COORDINATES: similar to AA sequence:RefSeq:WP_004699213.1
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005191581.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1
COORDINATES: similar to AA sequence:RefSeq:WP_006319562.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
pyruvate:ferredoxin (flavodoxin) oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_011411102.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
prolyl oligopeptidase family serine peptidase
COORDINATES: similar to AA sequence:RefSeq:WP_014888452.1
GO:0004345 - glucose-6-phosphate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411094.1
GO:0016746 - acyltransferase activity [Evidence IEA]
LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase, an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species; Derived by automated computational analysis using gene prediction method: Protein Homology.
lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002228437.1
GO:0042834 - peptidoglycan binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF007091.2
GO:0046872 - metal ion binding [Evidence IEA]
GO:0006829 - zinc ion transport [Evidence IEA]
zinc ABC transporter substrate-binding protein ZnuA
COORDINATES: similar to AA sequence:RefSeq:WP_011411092.1
GO:0015633 - ABC-type zinc transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
zinc ABC transporter ATP-binding protein ZnuC
COORDINATES: similar to AA sequence:RefSeq:WP_003849211.1
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
zinc ABC transporter permease subunit ZnuB
COORDINATES: similar to AA sequence:RefSeq:WP_011411091.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: similar to AA sequence:RefSeq:WP_006709047.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: similar to AA sequence:RefSeq:WP_008813301.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011411086.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411082.1
carboxy-S-adenosyl-L-methionine synthase CmoA
COORDINATES: similar to AA sequence:RefSeq:WP_004945559.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411076.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: similar to AA sequence:RefSeq:WP_015344708.1
COORDINATES: similar to AA sequence:RefSeq:WP_007900580.1
GO:0050661 - NADP binding [Evidence IEA]; GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
NADP-dependent phosphogluconate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_015839562.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012145970.1
COORDINATES: similar to AA sequence:RefSeq:WP_005171545.1
GO:0009279 - cell outer membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
GO:0034220 - ion transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015378557.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1
COORDINATES: similar to AA sequence:RefSeq:WP_016941090.1
GO:0016407 - acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015378592.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0004326 - tetrahydrofolylpolyglutamate synthase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
bifunctional tetrahydrofolate synthase/dihydrofolate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_019844012.1
acetyl-CoA carboxylase, carboxyltransferase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_012146048.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411449.1
COORDINATES: similar to AA sequence:RefSeq:WP_013975709.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016941130.1
GO:0008276 - protein methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0042273 - ribosomal large subunit biogenesis [Evidence IEA]
50S ribosomal protein L3 N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011411458.1
GO:0101006 - protein histidine phosphatase activity [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004145598.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004953802.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
CDP-diacylglycerol--serine O-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0042026 - protein refolding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410336.1
GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
23S rRNA pseudouridine(1911/1915/1917) synthase RluD
COORDINATES: similar to AA sequence:RefSeq:WP_004090569.1
GO:0019867 - outer membrane [Evidence IEA]
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0065003 - protein-containing complex assembly [Evidence IEA]
outer membrane protein assembly factor BamD
COORDINATES: similar to AA sequence:RefSeq:WP_004712521.1
COORDINATES: similar to AA sequence:RefSeq:WP_011410301.1
GO:0009019 - tRNA (guanine-N1-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_006660911.1
GO:0006364 - rRNA processing [Evidence IEA]
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002209458.1
COORDINATES: similar to AA sequence:RefSeq:WP_009874350.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019845296.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014668.2
COORDINATES: similar to AA sequence:RefSeq:WP_011145574.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012304556.1
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410503.1
COORDINATES: similar to AA sequence:RefSeq:WP_015872480.1
COORDINATES: similar to AA sequence:RefSeq:NP_461870.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000036724.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014889005.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011145269.1
iron-sulfur cluster insertion protein ErpA
COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1
GO:0102039 - NADH-dependent peroxiredoxin activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019455045.1
GO:0051087 - chaperone binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410290.1
GO:0043165 - Gram-negative-bacterium-type cell outer membrane assembly [Evidence IEA]; GO:0015920 - lipopolysaccharide transport [Evidence IEA]; GO:0010033 - response to organic substance [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410289.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0042277 - peptide binding [Evidence IEA]; GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0043165 - Gram-negative-bacterium-type cell outer membrane assembly [Evidence IEA]; GO:0060274 - maintenance of stationary phase [Evidence IEA]; GO:0006457 - protein folding [Evidence IEA]; GO:0050821 - protein stabilization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013811469.1
GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: similar to AA sequence:RefSeq:WP_011410287.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_011410285.1
GO:0008803 - bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity [Evidence IEA]
bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH
COORDINATES: similar to AA sequence:RefSeq:WP_012005165.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011410282.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_003845676.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_014888233.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015841784.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019080555.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1
COORDINATES: similar to AA sequence:RefSeq:YP_005225025.1
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410253.1
COORDINATES: similar to AA sequence:RefSeq:WP_011410246.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003724 - RNA helicase activity [Evidence IEA]
GO:0000027 - ribosomal large subunit assembly [Evidence IEA]
DEAD/DEAH family ATP-dependent RNA helicase
COORDINATES: similar to AA sequence:RefSeq:YP_005229009.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1
COORDINATES: similar to AA sequence:RefSeq:WP_002209256.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016943784.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014888186.1
COORDINATES: similar to AA sequence:RefSeq:WP_017801428.1
COORDINATES: similar to AA sequence:RefSeq:WP_015670611.1
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007872865.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:NP_312084.2
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005971510.1
GO:0016436 - rRNA (uridine) methyltransferase activity [Evidence IEA]
GO:0001510 - RNA methylation [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]
23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE
COORDINATES: similar to AA sequence:RefSeq:NP_708980.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002210181.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1
COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1
COORDINATES: similar to AA sequence:RefSeq:WP_015841842.1
GO:0016881 - acid-amino acid ligase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
COORDINATES: similar to AA sequence:RefSeq:YP_005224763.1
GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]
GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004699845.1
COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1
COORDINATES: similar to AA sequence:RefSeq:WP_012666877.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010617992.1
COORDINATES: similar to AA sequence:RefSeq:WP_013319303.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0008173 - RNA methyltransferase activity [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_011410206.1
GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0016070 - RNA metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004875464.1
COORDINATES: similar to AA sequence:RefSeq:WP_010295440.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0045861 - negative regulation of proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001051886.1
COORDINATES: similar to AA sequence:RefSeq:WP_012004893.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: similar to AA sequence:RefSeq:WP_017347408.1
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008807197.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: similar to AA sequence:RefSeq:WP_019453388.1
GO:0000175 - 3'-5'-exoribonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410175.1
GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012847216.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]
elongation factor P--(R)-beta-lysine ligase
COORDINATES: similar to AA sequence:RefSeq:WP_004925840.1
COORDINATES: similar to AA sequence:RefSeq:WP_005972972.1
GO:0072581 - protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011126364.1
COORDINATES: similar to AA sequence:RefSeq:WP_013357366.1
TusE/DsrC/DsvC family sulfur relay protein
COORDINATES: similar to AA sequence:RefSeq:WP_002210077.1
COORDINATES: similar to AA sequence:RefSeq:WP_012147105.1
COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1
COORDINATES: similar to AA sequence:RefSeq:WP_002210071.1
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004392389.1
acetyl-CoA carboxylase biotin carboxyl carrier protein
COORDINATES: similar to AA sequence:RefSeq:NP_312155.1
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1
DNA-binding transcriptional regulator Fis
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: similar to AA sequence:RefSeq:WP_013975509.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: similar to AA sequence:RefSeq:WP_015848543.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: similar to AA sequence:RefSeq:WP_011412234.1
GO:0032977 - membrane insertase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020324524.1
membrane protein insertion efficiency factor YidD
COORDINATES: similar to AA sequence:RefSeq:WP_011412236.1
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004246509.1
COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011409868.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:NP_312661.1
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_011193267.1
COORDINATES: similar to AA sequence:RefSeq:WP_011409882.1
GO:0004784 - superoxide dismutase activity [Evidence IEA]
GO:0006801 - superoxide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012004543.1
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002440676.1
COORDINATES: similar to AA sequence:RefSeq:WP_013975680.1
COORDINATES: similar to AA sequence:RefSeq:WP_013975536.1
COORDINATES: similar to AA sequence:RefSeq:WP_002209636.1
COORDINATES: similar to AA sequence:RefSeq:WP_005163962.1
GO:0097163 - sulfur carrier activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011095813.1
COORDINATES: similar to AA sequence:RefSeq:WP_015580491.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: similar to AA sequence:RefSeq:WP_013811079.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
signal recognition particle-docking protein FtsY
COORDINATES: similar to AA sequence:RefSeq:WP_006708562.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011409973.1
COORDINATES: similar to AA sequence:RefSeq:WP_006319487.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008461586.1
small-conductance mechanosensitive channel MscS
COORDINATES: similar to AA sequence:RefSeq:WP_015872577.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:YP_005228721.1
COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012669219.1
COORDINATES: similar to AA sequence:RefSeq:WP_016930090.1
COORDINATES: similar to AA sequence:RefSeq:WP_011411762.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003853407.1
GO:0019104 - DNA N-glycosylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005192570.1
GO:0005506 - iron ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005173635.1
GO:0008933 - lytic transglycosylase activity [Evidence IEA]
GO:0000270 - peptidoglycan metabolic process [Evidence IEA]
membrane-bound lytic murein transglycosylase MltC
COORDINATES: similar to AA sequence:RefSeq:WP_013315914.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011409990.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA
COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1
COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1
COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1
COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1
COORDINATES: similar to AA sequence:RefSeq:WP_006704116.1
COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1
COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1
COORDINATES: similar to AA sequence:RefSeq:WP_014268633.1
COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005501250.1
COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1
COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1
COORDINATES: similar to AA sequence:RefSeq:NP_312199.1
COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1
COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1
COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1
COORDINATES: similar to AA sequence:RefSeq:WP_002445361.1
COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1
COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1
COORDINATES: similar to AA sequence:RefSeq:WP_017374142.1
COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1
COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1
COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1
COORDINATES: similar to AA sequence:RefSeq:WP_011520533.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012990476.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004959824.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_014887744.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003850799.1
COORDINATES: similar to AA sequence:RefSeq:WP_019081495.1
COORDINATES: similar to AA sequence:RefSeq:WP_004709217.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015841916.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011412035.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_014888362.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011412031.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1
COORDINATES: similar to AA sequence:RefSeq:WP_011412024.1
GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1
COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1
COORDINATES: similar to AA sequence:RefSeq:WP_011412014.1
GO:0016740 - transferase activity [Evidence IEA]
lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
COORDINATES: similar to AA sequence:RefSeq:WP_019080305.1
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002353237.1
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:NP_462943.1
COORDINATES: similar to AA sequence:RefSeq:WP_013315885.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411980.1
GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]
GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005175847.1
COORDINATES: similar to AA sequence:RefSeq:WP_013315900.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: similar to AA sequence:RefSeq:WP_015731300.1
GO:0004802 - transketolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000623115.1
phosphoenolpyruvate-protein phosphotransferase PtsI
COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1
COORDINATES: similar to AA sequence:RefSeq:WP_015689494.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013975815.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411922.1
COORDINATES: similar to AA sequence:RefSeq:WP_014887751.1
GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015920 - lipopolysaccharide transport [Evidence IEA]
LPS export ABC transporter permease LptF
COORDINATES: similar to AA sequence:RefSeq:WP_004953051.1
LPS export ABC transporter permease LptG
COORDINATES: similar to AA sequence:RefSeq:WP_004701385.1
PTS IIA-like nitrogen regulatory protein PtsN
COORDINATES: similar to AA sequence:RefSeq:YP_005229050.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
LPS export ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015855309.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0001530 - lipopolysaccharide binding [Evidence IEA]
lipopolysaccharide transport periplasmic protein LptA
COORDINATES: similar to AA sequence:RefSeq:WP_011410066.1
LPS export ABC transporter periplasmic protein LptC
COORDINATES: similar to AA sequence:RefSeq:WP_004701358.1
COORDINATES: similar to AA sequence:RefSeq:WP_011410077.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0006950 - response to stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1
COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1
COORDINATES: similar to AA sequence:RefSeq:WP_013098899.1
GO:0006970 - response to osmotic stress [Evidence IEA]
division/outer membrane stress-associated lipid-binding lipoprotein
COORDINATES: protein motif:HMM:NF016251.2
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004170906.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: similar to AA sequence:RefSeq:WP_011410094.1
COORDINATES: similar to AA sequence:RefSeq:WP_017493531.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014333815.1
GO:0003896 - DNA primase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:NP_311975.1
COORDINATES: similar to AA sequence:RefSeq:WP_004925183.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_011410119.1
GO:0004150 - dihydroneopterin aldolase activity [Evidence IEA]
GO:0006760 - folic acid-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004704480.1
GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO:0016311 - dephosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004704479.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004810 - CCA tRNA nucleotidyltransferase [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001680 - tRNA 3'-terminal CCA addition [Evidence IEA]
multifunctional CCA addition/repair protein
COORDINATES: similar to AA sequence:RefSeq:WP_011410139.1
1-acylglycerol-3-phosphate O-acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_016928695.1
GO:0017057 - 6-phosphogluconolactonase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1
GO:0004619 - phosphoglycerate mutase activity [Evidence IEA]
2,3-diphosphoglycerate-dependent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_006708081.1
COORDINATES: similar to AA sequence:RefSeq:WP_011410859.1
GO:0008690 - 3-deoxy-manno-octulosonate cytidylyltransferase activity [Evidence IEA]
GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
3-deoxy-manno-octulosonate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014888195.1
GO:0009029 - tetraacyldisaccharide 4'-kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:NP_309024.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0034040 - ATPase-coupled lipid transmembrane transporter activity [Evidence IEA]
lipid A ABC transporter ATP-binding protein/permease MsbA
COORDINATES: similar to AA sequence:RefSeq:WP_014887835.1
COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1
COORDINATES: similar to AA sequence:RefSeq:WP_011410853.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012441862.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0004648 - O-phospho-L-serine:2-oxoglutarate aminotransferase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
3-phosphoserine/phosphohydroxythreonine transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_012006116.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1
outer membrane lipoprotein chaperone LolA
COORDINATES: similar to AA sequence:RefSeq:WP_010277214.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013975820.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0042883 - cysteine transport [Evidence IEA]
cysteine/glutathione ABC transporter permease/ATP-binding protein CydD
COORDINATES: similar to AA sequence:RefSeq:WP_011410738.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0034775 - glutathione transmembrane transport [Evidence IEA]
cysteine/glutathione ABC transporter ATP-binding protein/permease CydC
COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1
COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014888122.1
GO:0008693 - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [Evidence IEA]
bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_001681912.1
GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012413439.1
GO:0004366 - glycerol-3-phosphate O-acyltransferase activity [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsB
COORDINATES: protein motif:HMM:NF012920.2
COORDINATES: similar to AA sequence:RefSeq:WP_013814747.1
zinc uptake transcriptional repressor Zur
COORDINATES: similar to AA sequence:RefSeq:WP_011411948.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
GO:0002943 - tRNA dihydrouridine synthesis [Evidence IEA]
tRNA dihydrouridine(20/20a) synthase DusA
COORDINATES: similar to AA sequence:RefSeq:WP_012764371.1
COORDINATES: similar to AA sequence:RefSeq:WP_004936793.1
COORDINATES: similar to AA sequence:RefSeq:WP_010257198.1
menaquinone-dependent protoporphyrinogen IX dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_002215918.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411721.1
GO:0008409 - 5'-3' exonuclease activity [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: similar to AA sequence:RefSeq:NP_311790.1
COORDINATES: similar to AA sequence:RefSeq:WP_011411719.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1
GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011906449.1
GO:0006662 - glycerol ether metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015962291.1
COORDINATES: similar to AA sequence:RefSeq:WP_004927839.1
COORDINATES: similar to AA sequence:RefSeq:WP_011410908.1
COORDINATES: similar to AA sequence:RefSeq:WP_012765195.1
GO:0008995 - ribonuclease E activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410913.1
23S rRNA pseudouridine(955/2504/2580) synthase RluC
COORDINATES: similar to AA sequence:RefSeq:WP_011147057.1
COORDINATES: similar to AA sequence:RefSeq:WP_011410918.1
COORDINATES: similar to AA sequence:RefSeq:WP_012104963.1
GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013508660.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016940845.1
COORDINATES: similar to AA sequence:RefSeq:WP_012765207.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015580562.1
catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
DNA polymerase III subunit delta' C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006322503.1
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014888484.1
COORDINATES: similar to AA sequence:RefSeq:WP_013366643.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0004808 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]; GO:0002143 - tRNA wobble position uridine thiolation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005121085.1
GO:0042953 - lipoprotein transport [Evidence IEA]
lipoprotein-releasing ABC transporter permease subunit LolE
COORDINATES: similar to AA sequence:RefSeq:WP_013508685.1
lipoprotein-releasing ABC transporter ATP-binding protein LolD
COORDINATES: similar to AA sequence:RefSeq:WP_019083396.1
lipoprotein-releasing ABC transporter permease subunit LolC
COORDINATES: similar to AA sequence:RefSeq:WP_013650035.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1
COORDINATES: similar to AA sequence:RefSeq:WP_013975734.1
GO:0019899 - enzyme binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF008634.1
GO:0004652 - polynucleotide adenylyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006378 - mRNA polyadenylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012822861.1
GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
COORDINATES: similar to AA sequence:RefSeq:WP_011410461.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410441.1
GO:0045254 - pyruvate dehydrogenase complex [Evidence IEA]
GO:0004742 - dihydrolipoyllysine-residue acetyltransferase activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
dihydrolipoyllysine-residue acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO:0004738 - pyruvate dehydrogenase activity [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring), homodimeric type
COORDINATES: similar to AA sequence:RefSeq:WP_005167086.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015841720.1
COORDINATES: similar to AA sequence:RefSeq:WP_011410427.1
GO:0008759 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity [Evidence IEA]
UDP-3-O-acyl-N-acetylglucosamine deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:NP_308125.1
GO:0051301 - cell division [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410424.1
GO:0090529 - cell septum assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410422.1
GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012764277.1
COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: similar to AA sequence:RefSeq:WP_013811491.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0047480 - UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0071555 - cell wall organization [Evidence IEA]
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: similar to AA sequence:RefSeq:WP_016940602.1
GO:0016881 - acid-amino acid ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_004094559.1
GO:0008658 - penicillin binding [Evidence IEA]; GO:0008955 - peptidoglycan glycosyltransferase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016190958.1
COORDINATES: similar to AA sequence:RefSeq:WP_000970466.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: similar to AA sequence:RefSeq:NP_459621.1
transcription antiterminator/RNA stability regulator CspE
COORDINATES: similar to AA sequence:RefSeq:WP_004390611.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410656.1
GO:0033819 - lipoyl(octanoyl) transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017346856.1
COORDINATES: similar to AA sequence:RefSeq:WP_014887978.1
rod shape-determining protein RodA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014888876.1
GO:0008658 - penicillin binding [Evidence IEA]; GO:0009002 - serine-type D-Ala-D-Ala carboxypeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012883863.1
COORDINATES: similar to AA sequence:RefSeq:WP_012770634.1
GO:0043165 - Gram-negative-bacterium-type cell outer membrane assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001612599.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015671309.1
GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015872174.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014888289.1
GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]
GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:NP_459679.1
COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
ADP-forming succinate--CoA ligase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011410716.1
COORDINATES: similar to AA sequence:RefSeq:WP_012770585.1
GO:0070069 - cytochrome complex [Evidence IEA]
GO:0019646 - aerobic electron transport chain [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004393310.1
GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor [Evidence IEA]
cytochrome d ubiquinol oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_003022970.1
COORDINATES: similar to AA sequence:RefSeq:WP_005288883.1
forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004176849.1
peptidoglycan-associated lipoprotein Pal
COORDINATES: similar to AA sequence:RefSeq:WP_012668493.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: similar to AA sequence:RefSeq:WP_024131783.1
COORDINATES: similar to AA sequence:RefSeq:WP_004874607.1
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016941789.1
GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]