Mycolicibacillus parakoreensis strain DSM 45575 plasmid unnamed, complete sequence.
type: Entry
definition: Mycolicibacillus parakoreensis strain DSM 45575 plasmid unnamed, complete sequence.
sequence version: NZ_CP092366.2
sequence date: 2023-06-25
sequence: sequence
division: CON
label: NZ_CP092366.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN20254257
keyword: RefSeq
source: Mycolicibacillus parakoreensis (Mycobacterium parakoreense)
organism: Mycolicibacillus parakoreensis
taxonomy: Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycolicibacillus.
reference: 1
references: 36651784
reference: 2
reference: 3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP092366.2.\n\nOn Sep 15, 2022 this sequence version replaced NZ_CP092366.1.\nBacteria and source DNA available from German Collection of\nMicroorganisms and Cell Cultures (DSMZ).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Flye v. 2.9\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 134x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 06/25/2023 09:55:10\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,774\nCDSs (total) :: 3,719\nGenes (coding) :: 3,671\nCDSs (with protein) :: 3,671\nGenes (RNA) :: 55\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 46\nncRNAs :: 3\nPseudo Genes (total) :: 48\nCDSs (without protein) :: 48\nPseudo Genes (ambiguous residues) :: 0 of 48\nPseudo Genes (frameshifted) :: 10 of 48\nPseudo Genes (incomplete) :: 41 of 48\nPseudo Genes (internal stop) :: 1 of 48\nPseudo Genes (multiple problems) :: 4 of 48\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 14660
topology: circular
so has quality: SO_0000988
location: 1..14660
location: region:1-14660:1
RO_0002162: 1069221

NZ_CP092366
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN20254257
type: BioSample
SIO_000068: biosample

1
title: Complete Genome Sequences of 14 Nontuberculous Mycobacteria Type Strains
author: Igarashi, Y.
author: Osugi, A.
author: Murase, Y.
author: Chikamatsu, K.
author: Shimomura, Y.
author: Hosoya, M.
author: Aono, A.
author: Morishige, Y.
author: Yamada, H.
author: Takaki, A.
author: Mitarai, S.
journal: Microbiol Resour Announc 12 (2), e0121422 (2023)
pubmed: 36651784

36651784
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Igarashi, Y.
author: Osugi, A.
author: Mitarai, S.
journal: Submitted (22-AUG-2022) Department of Mycobacterium Reference and Research, Research Institute of Tuberculosis, 3-1-24 Matsuyama, Kiyose, Tokyo 204-8533, Japan
comments: Nucleotide sequence updated by submitter

3
title: Direct Submission
author: Igarashi, Y.
author: Osugi, A.
author: Mitarai, S.
journal: Submitted (15-FEB-2022) Department of Mycobacterium reference and research, Research Institute of Tuberculosis, 3-1-24 matsuyama, kiyose, tokyo 204-8533, Japan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14660:1
position: 14660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-14660:1:source
so part of: sequence
organism: Mycolicibacillus parakoreensis
mol type: genomic DNA
strain: DSM 45575
type material: type strain of Mycolicibacillus parakoreensis
plasmid: unnamed

1069221
type: Taxonomy
SIO_000068: taxonomy

MIU77_RS18830
type: Gene
subclass of: SO_0000704
RO_0002162: 1069221
locus tag: MIU77_RS18830
old locus tag: MIU77_18825
so part of: sequence
location: 1..291
location: region:1-291:1
so has part: feature:1-291:1:exon
subclass of: SO_0000010

position:291:1
position: 291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-291:1:exon

MIU77_RS18830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1069221
locus tag: MIU77_RS18830
old locus tag: MIU77_18825
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTADAADPDRIQAALAELRAEATAALEALTRHRDRAVELRAAADDEQRAYAAAYRAIRARGWFTVAQLTALGCPAPRTRRKRATPATGRERGPDRR
SIO_010081: MIU77_RS18830
subclass of: SO_0000673
so part of: MIU77_RS18830
location: 1..291
location: region:1-291:1
so has part: feature:1-291:1:exon

WP_240172989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-291:1:exon

MIU77_RS18835
type: Gene
subclass of: SO_0000704
RO_0002162: 1069221
locus tag: MIU77_RS18835
old locus tag: MIU77_18820
so part of: sequence
location: complement(1406..1609)
location: region:1406-1609:-1
so has part: feature:1406-1609:-1:exon
subclass of: SO_0000010

position:1406:-1
position: 1406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1609:-1
position: 1609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1406-1609:-1:exon

MIU77_RS18835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1069221
locus tag: MIU77_RS18835
old locus tag: MIU77_18820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008264012.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: toxin-antitoxin system
translation: MAQPNKGQRRQITPRLAAEVYAEVQRRAQERGMSTSQYVADVMAAHVGRPDLIRELNRTEEALPLAM
SIO_010081: MIU77_RS18835
subclass of: SO_0000673
so part of: MIU77_RS18835
location: complement(1406..1609)
location: region:1406-1609:-1
so has part: feature:1406-1609:-1:exon

WP_240172988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1406-1609:-1:exon

MIU77_RS18840
type: Gene
subclass of: SO_0000704
RO_0002162: 1069221
locus tag: MIU77_RS18840
old locus tag: MIU77_18815
so part of: sequence
location: complement(1658..2236)
location: region:1658-2236:-1
so has part: feature:1658-2236:-1:exon
subclass of: SO_0000010

position:1658:-1
position: 1658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2236:-1
position: 2236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1658-2236:-1:exon

MIU77_RS18840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1069221
locus tag: MIU77_RS18840
old locus tag: MIU77_18815
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDTSFPAGALYGRPDPALPVAAVVATAAGMLEAARKSDPSPAAKPWRATFRAECTDTDWTQYEPLIAAIEAAQQPVLAALAQRHRLRAAVLDSWATRLYAPPLAVQPPAMLALAAAVHNRPPPQPSVPCYQLDAMLAELQSVLVAAEADHAAAAEFDKAALAAISAAADPPDQQKAATANLAAASAKISGR
SIO_010081: MIU77_RS18840
subclass of: SO_0000673
so part of: MIU77_RS18840
location: complement(1658..2236)
location: region:1658-2236:-1
so has part: feature:1658-2236:-1:exon

WP_240172987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1658-2236:-1:exon

MIU77_RS18845
type: Gene
subclass of: SO_0000704
RO_0002162: 1069221
locus tag: MIU77_RS18845
old locus tag: MIU77_18810
so part of: sequence
location: complement(2233..4194)
location: region:2233-4194:-1
so has part: feature:2233-4194:-1:exon
subclass of: SO_0000010

position:2233:-1
position: 2233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4194:-1
position: 4194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2233-4194:-1:exon

MIU77_RS18845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1069221
locus tag: MIU77_RS18845
old locus tag: MIU77_18810
inference: COORDINATES: protein motif:HMM:NF037368.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5632 domain-containing protein
translation: MPPRDQPGQLAAAAQHWEDQRDQRLHEAARTNSTIRMLAVNEGRTAEHVIGSYQRTAVLLRRLADKADTKAAELRRVSDAATALISRLDGIAADGYDEIEHIQSSSADPITKQVAIAAVAARCHADAARASTEAVAMVEAATTRVLEAQGSALTARAALADHGGIVAAEPPPELPAAVPDVRGADTRGHGEGAGAEPPAGPAPVIPDVRQPATSEAGPGDAGAPPHIPVAGALSPATPAVPGVAPAPPPAAALGQALSPDSLGQAFVSGAAAGQGVAPGANALTAGTLHAAEAGSAPQPPPPVAPQPVAPGPPTPVPAVDAGPHTASPGTSLVPPVVDAPAAPAHPVMPVIAAGPPSAAAPPMAAAGPLPAYGSDLRPPVVAPPPPAAAAPAGPVGGTPVAPASAAGAPAGSLVSPVAKTAPPSSVAGAAAPATAGATAGAAAGALGGQVEEKARLQRIVDAVARQERGVAWAAGVRADGATLLTTDVACGWIPPHVRLPAGVVVLAPAVRRTDMTAVDLLGSVKVAAAHSAGYVPPPAADAPALTGDHRARATAELDELVPELVGLATRCGGLRRLVVTAARHGGRGGLAADERPLLAAYTAEYARDVLDGYPRPDPLAVGRWMITAAAEALVNGDRAAANYHTRWAKEILR
SIO_010081: MIU77_RS18845
subclass of: SO_0000673
so part of: MIU77_RS18845
location: complement(2233..4194)
location: region:2233-4194:-1
so has part: feature:2233-4194:-1:exon

WP_260063906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2233-4194:-1:exon

MIU77_RS18850
type: Gene
subclass of: SO_0000704
RO_0002162: 1069221
locus tag: MIU77_RS18850
old locus tag: MIU77_18890
so part of: sequence
location: complement(4227..4724)
location: region:4227-4724:-1
so has part: feature:4227-4724:-1:exon
subclass of: SO_0000010

position:4227:-1
position: 4227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4724:-1
position: 4724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4227-4724:-1:exon

MIU77_RS18850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1069221
locus tag: MIU77_RS18850
old locus tag: MIU77_18890
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVAAVARPVLAVLVVSAALTACAPAETPETSPPTAPTTQPVSAGPGPTDFGTDWVGPGPADYAAARARTCEDFDTAADAVSKAGARDPLAGQIALVNGAGLLERAADDPAMGGENADLAGKAQALARAYRLVAAAAGRGASDAEWAPVHDAAETATADMRTACR
SIO_010081: MIU77_RS18850
subclass of: SO_0000673
so part of: MIU77_RS18850
location: complement(4227..4724)
location: region:4227-4724:-1
so has part: feature:4227-4724:-1:exon

WP_240172985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4227-4724:-1:exon

MIU77_RS18855
type: Gene
subclass of: SO_0000704
RO_0002162: 1069221
locus tag: MIU77_RS18855
old locus tag: MIU77_18885
so part of: sequence
location: complement(4762..5022)
location: region:4762-5022:-1
so has part: feature:4762-5022:-1:exon
subclass of: SO_0000010

position:4762:-1
position: 4762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5022:-1
position: 5022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4762-5022:-1:exon

MIU77_RS18855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1069221
locus tag: MIU77_RS18855
old locus tag: MIU77_18885
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTELLSHGVVGVLLALQVAHRLALAAAQGEQLSVEEAARRIAGKQQGLATAAAAAYRDITTPCAGARSGSSIHITAWAGGGRDVG
SIO_010081: MIU77_RS18855
subclass of: SO_0000673
so part of: MIU77_RS18855
location: complement(4762..5022)
location: region:4762-5022:-1
so has part: feature:4762-5022:-1:exon

WP_240172984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4762-5022:-1:exon

MIU77_RS18860
type: Gene
subclass of: SO_0000704
RO_0002162: 1069221
locus tag: MIU77_RS18860
old locus tag: MIU77_18880
so part of: sequence
location: 5144..5776
location: region:5144-5776:1
so has part: feature:5144-5776:1:exon
subclass of: SO_0000010

position:5144:1
position: 5144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5776:1
position: 5776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5144-5776:1:exon

MIU77_RS18860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1069221
locus tag: MIU77_RS18860
old locus tag: MIU77_18880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005149425.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MERLTIAVANLKGGSTKTTTAAFVLHALAEAGLSVLGVDADGENESLLAWSETGEWTVPVIGMPVSDLHRKLPGIAGDRYDALVIDTPPMKEQRGVVASAIRLATHVLVPLAPTGMEYARLAAVRELVDDAAALAPGEPPQLAVVLTRTVANAASTEVYRQLLTDEGVRVLGPTVARLERYAQAFGLPITAAAATAYGDIAAELLAATVT
SIO_010081: MIU77_RS18860
subclass of: SO_0000673
so part of: MIU77_RS18860
location: 5144..5776
location: region:5144-5776:1
so has part: feature:5144-5776:1:exon

WP_240172983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5144-5776:1:exon

MIU77_RS18865
type: Gene
subclass of: SO_0000704
RO_0002162: 1069221
locus tag: MIU77_RS18865
old locus tag: MIU77_18875
so part of: sequence
location: 5972..6118
location: region:5972-6118:1
so has part: feature:5972-6118:1:exon
subclass of: SO_0000010

position:5972:1
position: 5972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6118:1
position: 6118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5972-6118:1:exon

MIU77_RS18865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1069221
locus tag: MIU77_RS18865
old locus tag: MIU77_18875
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDAWQSARAEDLGLARVTGQQVLAALIEQLLHDDALAEQITNTIAADQ
SIO_010081: MIU77_RS18865
subclass of: SO_0000673
so part of: MIU77_RS18865
location: 5972..6118
location: region:5972-6118:1
so has part: feature:5972-6118:1:exon

WP_240172982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5972-6118:1:exon

MIU77_RS18870
type: Gene
subclass of: SO_0000704
RO_0002162: 1069221
locus tag: MIU77_RS18870
old locus tag: MIU77_18870
so part of: sequence
location: 6341..6784
location: region:6341-6784:1
so has part: feature:6341-6784:1:exon
subclass of: SO_0000010

position:6341:1
position: 6341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6784:1
position: 6784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6341-6784:1:exon

MIU77_RS18870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1069221
locus tag: MIU77_RS18870
old locus tag: MIU77_18870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015298110.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRQQWVVHPNRSAIGPDAPGHNGHYRITSQGPPTAHTRYSVRVMLPARLEQTGDDDGTVTFRADSWRNLVAAASSFAEDFCPETLLPPFGFIDRGKWWWWDGTTTDHSILDGPDATAQVRRYLHGLFPAARSIELRDHSSSLPDKS
SIO_010081: MIU77_RS18870
subclass of: SO_0000673
so part of: MIU77_RS18870
location: 6341..6784
location: region:6341-6784:1
so has part: feature:6341-6784:1:exon

WP_240172981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6341-6784:1:exon

MIU77_RS18875
type: Gene
subclass of: SO_0000704
RO_0002162: 1069221
locus tag: MIU77_RS18875
old locus tag: MIU77_18865
so part of: sequence
location: complement(6913..7464)
location: region:6913-7464:-1
so has part: feature:6913-7464:-1:exon
subclass of: SO_0000010

position:6913:-1
position: 6913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7464:-1
position: 7464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6913-7464:-1:exon

MIU77_RS18875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1069221
locus tag: MIU77_RS18875
old locus tag: MIU77_18865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006680475.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MSILGYARVSTAYQSPDMQVAALRAAGAARVWVEQASGARDDRPELAAVLDYARSGDVLVVWRLDRLGRSLPHLLSVVEDLDARGVELRSLTEAIDTTSAGGRLVFHVFAAVAQFERALATERSAAGVAAARAAGRHPGRPKLSPATIEAARQLDQSGTPRAGIARALGISRSSVYRALTHRA
SIO_010081: MIU77_RS18875
subclass of: SO_0000673
so part of: MIU77_RS18875
location: complement(6913..7464)
location: region:6913-7464:-1
so has part: feature:6913-7464:-1:exon

WP_240172980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6913-7464:-1:exon

MIU77_RS18880
type: Gene
subclass of: SO_0000704
RO_0002162: 1069221
locus tag: MIU77_RS18880
old locus tag: MIU77_18860
so part of: sequence
location: complement(7461..7883)
location: region:7461-7883:-1
so has part: feature:7461-7883:-1:exon
subclass of: SO_0000010

position:7461:-1
position: 7461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7883:-1
position: 7883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7461-7883:-1:exon

MIU77_RS18880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1069221
locus tag: MIU77_RS18880
old locus tag: MIU77_18860
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVQMRATDAELIEHLADGRHLFVPGGQPHGHDRPALFKPFDDFEASPHPLNSAQTAVVRGSIPTFAPKPGWWVALAHLAHGRGTCTRCERVWSWSAEQWADVPDDGALFAAIDVVPQQPWAEPDALLVHIDDLPADLLQ
SIO_010081: MIU77_RS18880
subclass of: SO_0000673
so part of: MIU77_RS18880
location: complement(7461..7883)
location: region:7461-7883:-1
so has part: feature:7461-7883:-1:exon

WP_240172979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7461-7883:-1:exon

MIU77_RS18885
type: Gene
subclass of: SO_0000704
RO_0002162: 1069221
locus tag: MIU77_RS18885
old locus tag: MIU77_18855
so part of: sequence
location: complement(7926..8477)
location: region:7926-8477:-1
so has part: feature:7926-8477:-1:exon
subclass of: SO_0000010

position:7926:-1
position: 7926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8477:-1
position: 8477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7926-8477:-1:exon

MIU77_RS18885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1069221
locus tag: MIU77_RS18885
old locus tag: MIU77_18855
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDRRPQLQAGHWYLVYSEEENAPSIRGYMADGGWHPANPAPTRVICEMSRTHHPDNVDIADDFVVSDHDRAIIDQQFPPAVEDPLIARGVRALAERLCVAAGHPWDPDWQWDEATEPTPMANRHVWFLVIAAAVCRQSSGTAPQVRSWDEVQAKMGDPEGIFRPKRWPAEDIPGAVPLPAGTT
SIO_010081: MIU77_RS18885
subclass of: SO_0000673
so part of: MIU77_RS18885
location: complement(7926..8477)
location: region:7926-8477:-1
so has part: feature:7926-8477:-1:exon

WP_240172978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7926-8477:-1:exon

MIU77_RS18890
type: Gene
subclass of: SO_0000704
RO_0002162: 1069221
locus tag: MIU77_RS18890
old locus tag: MIU77_18850
so part of: sequence
location: 8861..9406
location: region:8861-9406:1
so has part: feature:8861-9406:1:exon
subclass of: SO_0000010

position:8861:1
position: 8861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9406:1
position: 9406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8861-9406:1:exon

MIU77_RS18890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1069221
locus tag: MIU77_RS18890
old locus tag: MIU77_18850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005149445.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPAVELFVDESCRTDYLLCAAVVPVADIAMARKFMRELKPKNRARLHMKSESRHRSQLLARFVQAPPIDQAHIFVGQLRGTRRTQREARTQCLEALACYAADNGVSRILIESCSQDKQDRTAVVGALAAKAATARVRVTIDRPTSHELLWAADLVAWAYGAGGTARKAIQHLVTVHNLPLA
SIO_010081: MIU77_RS18890
subclass of: SO_0000673
so part of: MIU77_RS18890
location: 8861..9406
location: region:8861-9406:1
so has part: feature:8861-9406:1:exon

WP_240172977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8861-9406:1:exon

MIU77_RS18895
type: Gene
subclass of: SO_0000704
RO_0002162: 1069221
locus tag: MIU77_RS18895
old locus tag: MIU77_18845
so part of: sequence
location: complement(9605..12031)
location: region:9605-12031:-1
so has part: feature:9605-12031:-1:exon
subclass of: SO_0000010

position:9605:-1
position: 9605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12031:-1
position: 12031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9605-12031:-1:exon

MIU77_RS18895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1069221
locus tag: MIU77_RS18895
old locus tag: MIU77_18845
inference: COORDINATES: protein motif:HMM:NF014581.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MSAGWGPQHQTGLPGGLQFGRPGGYWWAIAVLGAATAAINLAAPASLGTGLTVLLVWIAPAGLGGAVGVHEARTGRVFACHRWVAYALTLILSPACGIAYAAGYFGIRWWPQIAATRQANRVARWEAQAIADADDGTVAWPSLAGGFFGVDDAGKPVLANPRGAALIVGPPGAGKTFSCIAASVAYAPAACVSTTIKTEVMAATAAIRQHKGRAYWFNPGGGDDEPAPNGVQQLKWSPLVDVGSWSAALAVAARLTGPFKPGAGAGGTGSGDHWTDKAESWLAVLLYAASLGGGLEQFAGWTRSPERGLEEVEAALLEAEALNGDQGAYAARSVLDGLSSTADRERSSIASTVSRIMKIYQDPVAVAAGTDPNFNADQFVQSSDTLYITVPMSKVDQYAPLTAGLLESIRAAQESRRQKIDLGHDTQDAPITFVLDEATNTAQLPLPQIASTAGGQGIHLVVAVQEPNQVRQRWGVAGEGFLTLFPDKLILSGMNDDKWATMLSKMSGHFDRLTTRISAGSRSRQNRAGLLFDSPVGSTDAGPAISYQSQRTAQLEPADITGLPEWRALHFSRRGWQLIHMHKFDPDHPIGGPAPAKKPQPGNTGVGGWLARGPGWAANRASPTAVWTAVKVAGVGVAAVIAGAWLLPKLNAPGTATTTTPPTVAATTPAAAHPAPPASQPPEWTANAVNGVVLSGFVYTRPDRCDESNLLPTLTVHTWTPDDKTEVALRCYLATDVAEFAAKAGELDWPEYGPLAVQDYHNVTAPAAAPGGRGALGLERLDPACPGVATLTRDPVLMPARCEIKPTI
SIO_010081: MIU77_RS18895
subclass of: SO_0000673
so part of: MIU77_RS18895
location: complement(9605..12031)
location: region:9605-12031:-1
so has part: feature:9605-12031:-1:exon

WP_240172993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9605-12031:-1:exon

MIU77_RS18900
type: Gene
subclass of: SO_0000704
RO_0002162: 1069221
locus tag: MIU77_RS18900
old locus tag: MIU77_18840
so part of: sequence
location: complement(12028..12744)
location: region:12028-12744:-1
so has part: feature:12028-12744:-1:exon
subclass of: SO_0000010

position:12028:-1
position: 12028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12744:-1
position: 12744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12028-12744:-1:exon

MIU77_RS18900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1069221
locus tag: MIU77_RS18900
old locus tag: MIU77_18840
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTQQEQVGRVRSDTDVMWMFGIPAVLAYGVWQAVSPVMVRAAERRGLVWTDHGGLHIAPLAWVSLVVIGAAATAACIAASWVLRAGRERRNPGGPLPAPPRISAAVAAFGLVWVVCVVLAGPWPLVWHVTVAAAAAAAYGAARLAHRGGSRWRAVQLFRRAATDVLGFAEPGLGRVRAGRWRADDQPAAIRATTGPGWRYSAAATGALDRAAAAAGWHGPYQWRDAPAAAAVIGELIK
SIO_010081: MIU77_RS18900
subclass of: SO_0000673
so part of: MIU77_RS18900
location: complement(12028..12744)
location: region:12028-12744:-1
so has part: feature:12028-12744:-1:exon

WP_240172992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12028-12744:-1:exon

MIU77_RS18905
type: Gene
subclass of: SO_0000704
RO_0002162: 1069221
locus tag: MIU77_RS18905
old locus tag: MIU77_18835
so part of: sequence
location: complement(12741..13511)
location: region:12741-13511:-1
so has part: feature:12741-13511:-1:exon
subclass of: SO_0000010

position:12741:-1
position: 12741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13511:-1
position: 13511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12741-13511:-1:exon

MIU77_RS18905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1069221
locus tag: MIU77_RS18905
old locus tag: MIU77_18835
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDAARALAYDYGPGRAMEHTNARRVAGTVPGRDWRARGRMMQTQLREAGDTRPGGPQRVWRLAIAAAPEDRIMSDREWAGIADRVVGEFTRRDPHAYSWEAVRHDARHIHVTLLHRGADGRVFREGMYKKRCLEIAAGLERDHQLRSLSAERATERTPQVRQRRRGETAAARRRHQRGGRPRQPAVGDRAPAATAQDRGGSRGLWDAAVLGSRPPQWDRWDDQRQREFIRARIHDHQKSARLNRNRDRDRDEGIDR
SIO_010081: MIU77_RS18905
subclass of: SO_0000673
so part of: MIU77_RS18905
location: complement(12741..13511)
location: region:12741-13511:-1
so has part: feature:12741-13511:-1:exon

WP_240172991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12741-13511:-1:exon

MIU77_RS18910
type: Gene
subclass of: SO_0000704
RO_0002162: 1069221
locus tag: MIU77_RS18910
old locus tag: MIU77_18830
so part of: sequence
location: complement(13532..14224)
location: region:13532-14224:-1
so has part: feature:13532-14224:-1:exon
subclass of: SO_0000010

position:13532:-1
position: 13532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14224:-1
position: 14224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13532-14224:-1:exon

MIU77_RS18910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1069221
locus tag: MIU77_RS18910
old locus tag: MIU77_18830
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVAAQSSSAVVVTTVRVWAGVPAHWRGRPGGAADAVLSTAIAALEGPDGRAPIPVADDAAVAALNQAGRLLNAALRARYERGGGAGAIGLCAQRVAAAARELRAGLPEPNVVEVCRGPLTGLVKLRAEARLMRLMRAAGRTHSMSFGAWVRDGVAAGFGEHQVRAPAPSTFAALVAVRRAVALVVQAEQITATAVEAAEVAAADDALAAAARAVRGGGQRLGPYSARRKR
SIO_010081: MIU77_RS18910
subclass of: SO_0000673
so part of: MIU77_RS18910
location: complement(13532..14224)
location: region:13532-14224:-1
so has part: feature:13532-14224:-1:exon

WP_240172990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13532-14224:-1:exon