Azospirillum baldaniorum strain Sp245 plasmid Sp245_p03.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Azospirillaceae; Azospirillum.
Denitrification Functional Genes Identified in Mobile Genetic Elements in Azospirillum Denitrifiers
Submitted (23-JUN-2017) Biotechnology Institute, University of Minnesota, 140 Gortner Lab, 1449 Gortner Avenue, St. Paul, MN 55108, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP022255.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 20-MAR-2017\nAssembly Method :: HGAP4 v. MAR-2017\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 145.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/05/2023 05:32:19\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,990\nCDSs (total) :: 6,867\nGenes (coding) :: 6,773\nCDSs (with protein) :: 6,773\nGenes (RNA) :: 123\nrRNAs :: 9, 10, 10 (5S, 16S, 23S)\ncomplete rRNAs :: 9, 10, 10 (5S, 16S, 23S)\ntRNAs :: 90\nncRNAs :: 4\nPseudo Genes (total) :: 94\nCDSs (without protein) :: 94\nPseudo Genes (ambiguous residues) :: 0 of 94\nPseudo Genes (frameshifted) :: 35 of 94\nPseudo Genes (incomplete) :: 73 of 94\nPseudo Genes (internal stop) :: 2 of 94\nPseudo Genes (multiple problems) :: 15 of 94\n##Genome-Annotation-Data-END##
COORDINATES: similar to AA sequence:RefSeq:WP_014199377.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_014248863.1
COORDINATES: similar to AA sequence:RefSeq:WP_012973482.1
COORDINATES: similar to AA sequence:RefSeq:WP_012041754.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006228248.1
COORDINATES: similar to AA sequence:RefSeq:WP_015989375.1
COORDINATES: similar to AA sequence:RefSeq:WP_013540202.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010097156.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006752334.1
COORDINATES: similar to AA sequence:RefSeq:WP_007917738.1
GO:0004803 - transposase activity [Evidence IEA]
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013502496.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014750910.1
COORDINATES: similar to AA sequence:RefSeq:WP_011472451.1
GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188773.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005014330.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019119231.1
COORDINATES: similar to AA sequence:RefSeq:WP_009491509.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013396991.1
branched-chain amino acid ABC transporter ATP-binding protein/permease
COORDINATES: similar to AA sequence:RefSeq:WP_007757903.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_009491512.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015930251.1
COORDINATES: similar to AA sequence:RefSeq:WP_009026180.1
acyclic terpene utilization AtuA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020043018.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249821.1
flagellar hook capping FlgD N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249820.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249817.1
GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249816.1
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249815.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249814.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO:0007155 - cell adhesion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249813.1
COORDINATES: similar to AA sequence:RefSeq:WP_019647159.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249811.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249810.1
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014198545.1
COORDINATES: protein motif:HMM:NF028103.2
DNA-primase RepB domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018856870.1
COORDINATES: similar to AA sequence:RefSeq:WP_014331257.1
COORDINATES: similar to AA sequence:RefSeq:WP_018569972.1
COORDINATES: protein motif:HMM:NF039808.1
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611178.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020656948.1
COORDINATES: similar to AA sequence:RefSeq:WP_007436228.1
COORDINATES: protein motif:HMM:NF024935.2
COORDINATES: similar to AA sequence:RefSeq:WP_014777880.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020503107.1
COORDINATES: similar to AA sequence:RefSeq:WP_018954449.1
COORDINATES: similar to AA sequence:RefSeq:WP_006941312.1
GO:0006629 - lipid metabolic process [Evidence IEA]
patatin-like phospholipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007437019.1
COORDINATES: similar to AA sequence:RefSeq:WP_043766426.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: protein motif:HMM:TIGR02606.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250140.1
COORDINATES: similar to AA sequence:RefSeq:WP_013039567.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250158.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250159.1
COORDINATES: similar to AA sequence:RefSeq:WP_018261705.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012778969.1
TIGR04295 family B12-binding domain-containing radical SAM protein
COORDINATES: similar to AA sequence:RefSeq:WP_012605349.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_012332430.1
COORDINATES: similar to AA sequence:RefSeq:WP_014765769.1
COORDINATES: similar to AA sequence:RefSeq:WP_012522644.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250167.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188235.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250168.1
COORDINATES: protein motif:HMM:NF012492.2
COORDINATES: similar to AA sequence:RefSeq:WP_010219387.1
COORDINATES: similar to AA sequence:RefSeq:WP_015857238.1
PAS domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF012436.2
COORDINATES: similar to AA sequence:RefSeq:WP_011083146.1
COORDINATES: similar to AA sequence:RefSeq:WP_012569027.1
GO:0050304 - nitrous-oxide reductase activity [Evidence IEA]
GO:0019333 - denitrification pathway [Evidence IEA]
7.4 : Cations and iron carrying compounds
COORDINATES: similar to AA sequence:RefSeq:WP_011470912.1
nitrous oxide reductase family maturation protein NosD
COORDINATES: similar to AA sequence:RefSeq:WP_014189251.1
COORDINATES: similar to AA sequence:RefSeq:WP_015669543.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014528630.1
nitrous oxide reductase accessory protein NosL
COORDINATES: similar to AA sequence:RefSeq:WP_012569022.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0017013 - protein flavinylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007685564.1
GO:0043953 - protein transport by the Tat complex [Evidence IEA]
twin-arginine translocase TatA/TatE family subunit
COORDINATES: protein motif:HMM:NF006901.0
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF017727.2
COORDINATES: similar to AA sequence:RefSeq:WP_014242500.1
11.4 : Degradation of proteins, peptides, and glycopeptides
COORDINATES: similar to AA sequence:RefSeq:WP_015669870.1
GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189246.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189245.1
SCP2 sterol-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189234.1
COORDINATES: similar to AA sequence:RefSeq:WP_012569091.1
GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009452062.1
COORDINATES: protein motif:HMM:NF013936.2
GO:0043169 - cation binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249583.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0042908 - xenobiotic transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977121.1
3 : Fatty acid and phospholipid metabolism
COORDINATES: similar to AA sequence:RefSeq:WP_014249581.1
COORDINATES: similar to AA sequence:RefSeq:WP_014900991.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011441007.1
COORDINATES: similar to AA sequence:RefSeq:WP_006610858.1
GO:0003985 - acetyl-CoA C-acetyltransferase activity [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017314218.1
COORDINATES: similar to AA sequence:RefSeq:WP_006386283.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_020681614.1
GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008593086.1
COORDINATES: similar to AA sequence:RefSeq:WP_020702911.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012042871.1
GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011766255.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008577915.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018915224.1
GO:0047472 - 3-carboxy-cis,cis-muconate cycloisomerase activity [Evidence IEA]
3-carboxy-cis,cis-muconate cycloisomerase
COORDINATES: similar to AA sequence:RefSeq:WP_020654697.1
CaiB/BaiF CoA-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011803170.1
MaoC family dehydratase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009493837.1
GO:0015293 - symporter activity [Evidence IEA]
GO:0006835 - dicarboxylic acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007614192.1
COORDINATES: similar to AA sequence:RefSeq:WP_007614193.1
COORDINATES: similar to AA sequence:RefSeq:WP_018041879.1
COORDINATES: similar to AA sequence:RefSeq:WP_011492993.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010448290.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976181.1
COORDINATES: similar to AA sequence:RefSeq:WP_014247512.1
PepSY-associated TM helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014247513.1
COORDINATES: similar to AA sequence:RefSeq:WP_014247514.1
COORDINATES: similar to AA sequence:RefSeq:WP_014247515.1
COORDINATES: similar to AA sequence:RefSeq:WP_014247516.1
GO:0046872 - metal ion binding [Evidence IEA]
zinc ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014199231.1
metal ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014247518.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO:0030001 - metal ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014247519.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976772.1
COORDINATES: similar to AA sequence:RefSeq:WP_009314102.1
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012975513.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012975512.1
GO:0051213 - dioxygenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025214.2
COORDINATES: similar to AA sequence:RefSeq:NP_248883.1
COORDINATES: similar to AA sequence:RefSeq:WP_014751284.1
COORDINATES: similar to AA sequence:RefSeq:WP_013596466.1
COORDINATES: similar to AA sequence:RefSeq:WP_007856519.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012330794.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_076612067.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011589126.1
COORDINATES: similar to AA sequence:RefSeq:WP_010943324.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
ribosome-associated ATPase/putative transporter RbbA
COORDINATES: similar to AA sequence:RefSeq:WP_012285994.1
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013375187.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008888138.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008888084.1
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019400570.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018903483.1
GO:0016853 - isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009208650.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010406610.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0009045 - xylose isomerase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010406609.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004856 - xylulokinase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0005997 - xylulose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017482940.1
COORDINATES: similar to AA sequence:RefSeq:WP_003517037.1
COORDINATES: similar to AA sequence:RefSeq:WP_018327633.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017482944.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189430.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976904.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189432.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_012976967.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188821.1
methanol/ethanol family PQQ-dependent dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014188820.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188819.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006390646.1
COORDINATES: similar to AA sequence:RefSeq:WP_006159969.1
COORDINATES: similar to AA sequence:RefSeq:WP_018388892.1
COORDINATES: similar to AA sequence:RefSeq:WP_002724377.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006159972.1
COORDINATES: similar to AA sequence:RefSeq:WP_018388895.1
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: similar to AA sequence:RefSeq:WP_002682566.1
isocitrate lyase/PEP mutase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014415371.1
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007426542.1
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_008944184.1
COORDINATES: similar to AA sequence:RefSeq:WP_019014465.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008386460.1
COORDINATES: similar to AA sequence:RefSeq:WP_019014463.1
COORDINATES: similar to AA sequence:RefSeq:WP_019577392.1
COORDINATES: protein motif:HMM:NF012298.2
COORDINATES: protein motif:HMM:NF024842.2
COORDINATES: protein motif:HMM:NF018066.2
GO:0016829 - lyase activity [Evidence IEA]
acetoacetate decarboxylase family protein
COORDINATES: protein motif:HMM:NF015316.2
outer membrane protein transport protein
COORDINATES: similar to AA sequence:RefSeq:WP_006609027.1
GO:0008851 - ethanolamine ammonia-lyase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009027120.1
COORDINATES: similar to AA sequence:RefSeq:WP_012973458.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199162.1
COORDINATES: protein motif:HMM:NF020885.2
COORDINATES: protein motif:HMM:NF028088.2
COORDINATES: similar to AA sequence:RefSeq:WP_015978791.1
COORDINATES: similar to AA sequence:RefSeq:WP_015989358.1
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: similar to AA sequence:RefSeq:WP_007673862.1
COORDINATES: similar to AA sequence:RefSeq:WP_013393803.1
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007091789.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014486097.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005014967.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199144.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020175908.1
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013584.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014241459.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976852.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_020091157.1
four-carbon acid sugar kinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020091158.1
GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: similar to AA sequence:RefSeq:WP_007005236.1
COORDINATES: similar to AA sequence:RefSeq:WP_019462820.1
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013587873.1
COORDINATES: similar to AA sequence:RefSeq:WP_013542349.1
COORDINATES: similar to AA sequence:RefSeq:WP_006615603.1
COORDINATES: similar to AA sequence:RefSeq:WP_008965923.1
COORDINATES: similar to AA sequence:RefSeq:WP_020039131.1
COORDINATES: similar to AA sequence:RefSeq:WP_007002448.1
COORDINATES: similar to AA sequence:RefSeq:WP_015599748.1
COORDINATES: similar to AA sequence:RefSeq:WP_007436363.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
PLP-dependent aminotransferase family protein
COORDINATES: protein motif:HMM:NF012610.2
COORDINATES: similar to AA sequence:RefSeq:WP_007183821.1
COORDINATES: similar to AA sequence:RefSeq:WP_014074822.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978211.1
COORDINATES: similar to AA sequence:RefSeq:WP_015821424.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]
Orn/Lys/Arg decarboxylase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012561499.1
COORDINATES: protein motif:HMM:NF025611.2
COORDINATES: similar to AA sequence:RefSeq:WP_003590977.1
COORDINATES: similar to AA sequence:RefSeq:WP_012289066.1
COORDINATES: similar to AA sequence:RefSeq:WP_006328522.1
COORDINATES: similar to AA sequence:RefSeq:WP_003533748.1
COORDINATES: similar to AA sequence:RefSeq:WP_006328519.1
lipocalin-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003533723.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003533724.1
xanthine dehydrogenase family protein subunit M
COORDINATES: similar to AA sequence:RefSeq:WP_020735115.1
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_006394137.1
COORDINATES: similar to AA sequence:RefSeq:WP_011846527.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611683.1
COORDINATES: similar to AA sequence:RefSeq:WP_011085632.1
GO:0015103 - inorganic anion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012330183.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012606126.1
COORDINATES: protein motif:HMM:NF025433.2
LssY C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006046793.1
COORDINATES: protein motif:HMM:NF021435.2
COORDINATES: protein motif:HMM:NF014523.2
putative ABC-type transport system involved in resitance to organic solvents, ATP-binding protein
COORDINATES: protein motif:HMM:NF014460.2
COORDINATES: protein motif:HMM:NF012437.2
COORDINATES: protein motif:HMM:NF019500.2
COORDINATES: similar to AA sequence:RefSeq:WP_020808309.1
COORDINATES: protein motif:HMM:NF022616.2
COORDINATES: similar to AA sequence:RefSeq:WP_003541096.1
COORDINATES: similar to AA sequence:RefSeq:WP_014194016.1
COORDINATES: similar to AA sequence:RefSeq:WP_011843229.1
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006683294.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013635074.1
COORDINATES: similar to AA sequence:RefSeq:WP_012252445.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014744967.1
COORDINATES: similar to AA sequence:RefSeq:WP_017961080.1
COORDINATES: similar to AA sequence:RefSeq:WP_016492220.1
COORDINATES: similar to AA sequence:RefSeq:WP_014247521.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199067.1
GO:0019867 - outer membrane [Evidence IEA]
GO:0015343 - siderophore-iron transmembrane transporter activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF016648.2
GO:0016989 - sigma factor antagonist activity [Evidence IEA]; GO:0004888 - transmembrane signaling receptor activity [Evidence IEA]
GO:0006811 - monoatomic ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014247524.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_013167034.1
COORDINATES: protein motif:HMM:TIGR03025.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
GO:0032508 - DNA duplex unwinding [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
COORDINATES: protein motif:HMM:NF024967.2
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
conserved membrane protein of unknown function
COORDINATES: similar to AA sequence:RefSeq:WP_008943836.1
WecB/TagA/CpsF family glycosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007005891.1
GO:0016020 - membrane [Evidence IEA]; GO:0042597 - periplasmic space [Evidence IEA]
GO:0015159 - polysaccharide transmembrane transporter activity [Evidence IEA]
polysaccharide biosynthesis/export family protein
COORDINATES: protein motif:HMM:NF016908.2
COORDINATES: similar to AA sequence:RefSeq:WP_008943831.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197969.1
COORDINATES: protein motif:HMM:NF017658.2
filamentous hemagglutinin N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024180.2
COORDINATES: protein motif:HMM:NF015803.2
ShlB/FhaC/HecB family hemolysin secretion/activation protein
COORDINATES: similar to AA sequence:RefSeq:WP_011158170.1
COORDINATES: similar to AA sequence:RefSeq:WP_012752259.1
COORDINATES: similar to AA sequence:RefSeq:WP_008159951.1
COORDINATES: similar to AA sequence:RefSeq:WP_012591664.1
COORDINATES: similar to AA sequence:RefSeq:WP_007434844.1
COORDINATES: similar to AA sequence:RefSeq:WP_008931685.1
COORDINATES: similar to AA sequence:RefSeq:WP_002929585.1
COORDINATES: similar to AA sequence:RefSeq:WP_011157887.1
COORDINATES: similar to AA sequence:RefSeq:WP_011236174.1
COORDINATES: protein motif:HMM:NF024799.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0000976 - transcription cis-regulatory region binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]; GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
LacI family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF014850.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
glycoside hydrolase family 2 TIM barrel-domain containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000989019.1
TRAP transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF016200.2
COORDINATES: similar to AA sequence:RefSeq:WP_011978804.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
COORDINATES: protein motif:HMM:NF013239.2
COORDINATES: similar to AA sequence:RefSeq:WP_014189181.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189196.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189195.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010138904.1
COORDINATES: similar to AA sequence:RefSeq:WP_019998396.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020186274.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189191.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189190.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189185.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189186.1
COORDINATES: similar to AA sequence:RefSeq:WP_018641639.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189188.1
COORDINATES: similar to AA sequence:RefSeq:WP_020186281.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019400911.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019400912.1
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018643449.1
COORDINATES: protein motif:HMM:NF012904.2
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_008137763.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007005234.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015934129.1
COORDINATES: similar to AA sequence:RefSeq:WP_007818399.1
GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_013259384.1
COORDINATES: protein motif:HMM:NF024503.2
GO:0015291 - secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012801.2
GO:0015267 - channel activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF018269.2
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: similar to AA sequence:RefSeq:WP_014745649.1
COORDINATES: similar to AA sequence:RefSeq:WP_011472456.1
GO:0003858 - 3-hydroxybutyrate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009540759.1
3-keto-5-aminohexanoate cleavage protein
COORDINATES: similar to AA sequence:RefSeq:WP_006938830.1
GO:0070403 - NAD+ binding [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014198990.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014250143.1
COORDINATES: similar to AA sequence:RefSeq:WP_002718878.1
GO:0055085 - transmembrane transport [Evidence IEA]; GO:0042908 - xenobiotic transport [Evidence IEA]
multidrug efflux RND transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014188480.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975035.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019014777.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: protein motif:HMM:NF012301.2
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009540239.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189285.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977692.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977691.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977690.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189289.1
COORDINATES: similar to AA sequence:RefSeq:WP_012330709.1
COORDINATES: similar to AA sequence:RefSeq:WP_012071585.1
COORDINATES: similar to AA sequence:RefSeq:WP_018493053.1
COORDINATES: similar to AA sequence:RefSeq:WP_008593103.1
GO:0047443 - 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity [Evidence IEA]
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase
COORDINATES: similar to AA sequence:RefSeq:WP_019621379.1
COORDINATES: similar to AA sequence:RefSeq:WP_013660017.1
COORDINATES: similar to AA sequence:RefSeq:WP_012348699.1
protocatechuate 4,5-dioxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_006296240.1
class III extradiol dioxygenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014625987.1
COORDINATES: similar to AA sequence:RefSeq:WP_011388423.1
COORDINATES: similar to AA sequence:RefSeq:WP_020092020.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555720.1
COORDINATES: similar to AA sequence:RefSeq:WP_003284463.1
energy-coupling factor ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_012592420.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0050898 - nitrile metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018484462.1
GO:0018822 - nitrile hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012592418.1
COORDINATES: similar to AA sequence:RefSeq:WP_012592416.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012495277.1
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014414127.1
COORDINATES: similar to AA sequence:RefSeq:WP_014750007.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272082.1
GO:0008442 - 3-hydroxyisobutyrate dehydrogenase activity [Evidence IEA]
GO:0006574 - valine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011766933.1
COORDINATES: similar to AA sequence:RefSeq:WP_012706349.1
COORDINATES: similar to AA sequence:RefSeq:WP_014236308.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249378.1
GO:0050421 - nitrite reductase (NO-forming) activity [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013736.2
GAF domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_012565541.1
COORDINATES: protein motif:HMM:NF024835.2
COORDINATES: similar to AA sequence:RefSeq:WP_012974963.1
COORDINATES: similar to AA sequence:RefSeq:WP_014248676.1
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: protein motif:HMM:NF013444.2
GO:0009058 - biosynthetic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: similar to AA sequence:RefSeq:WP_016833700.1
COORDINATES: similar to AA sequence:RefSeq:WP_003273030.1
COORDINATES: similar to AA sequence:RefSeq:WP_003275966.1
COORDINATES: similar to AA sequence:RefSeq:WP_005014392.1
COORDINATES: similar to AA sequence:RefSeq:WP_008996425.1
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611221.1
COORDINATES: protein motif:HMM:NF025082.2
COORDINATES: similar to AA sequence:RefSeq:WP_006222480.1
COORDINATES: similar to AA sequence:RefSeq:WP_011970337.1
COORDINATES: similar to AA sequence:RefSeq:WP_011970338.1
COORDINATES: similar to AA sequence:RefSeq:WP_006215987.1
COORDINATES: similar to AA sequence:RefSeq:WP_015934137.1
GO:0009436 - glyoxylate catabolic process [Evidence IEA]; GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017235371.1
IclR family transcriptional regulator C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009801685.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_012977182.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012568714.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007003891.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0015662 - P-type ion transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009490800.1
COORDINATES: similar to AA sequence:RefSeq:WP_009764166.1
COORDINATES: similar to AA sequence:RefSeq:WP_009211232.1
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018390721.1
7.3 : Carbohydrates, organic alcohols, and acids
COORDINATES: similar to AA sequence:RefSeq:WP_019427727.1
GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188133.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014198903.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188131.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188130.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188129.1
COORDINATES: similar to AA sequence:RefSeq:WP_018309056.1
COORDINATES: similar to AA sequence:RefSeq:WP_018858903.1
COORDINATES: similar to AA sequence:RefSeq:WP_011493999.1
COORDINATES: similar to AA sequence:RefSeq:WP_015049219.1
COORDINATES: similar to AA sequence:RefSeq:WP_009756325.1
COORDINATES: similar to AA sequence:RefSeq:WP_009756326.1
COORDINATES: similar to AA sequence:RefSeq:WP_009756327.1
COORDINATES: protein motif:HMM:NF027439.2
COORDINATES: similar to AA sequence:RefSeq:WP_004567907.1
COORDINATES: similar to AA sequence:RefSeq:WP_013744502.1
Zn-ribbon domain-containing OB-fold protein
COORDINATES: similar to AA sequence:RefSeq:WP_020699709.1
COORDINATES: protein motif:HMM:NF013757.2
COORDINATES: similar to AA sequence:RefSeq:WP_011443564.1
COORDINATES: similar to AA sequence:RefSeq:WP_012643207.1
COORDINATES: similar to AA sequence:RefSeq:WP_013395505.1
COORDINATES: similar to AA sequence:RefSeq:WP_013395506.1
COORDINATES: similar to AA sequence:RefSeq:WP_013395507.1
COORDINATES: similar to AA sequence:RefSeq:WP_008944222.1
thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011493986.1
GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
pyruvate dehydrogenase complex E1 component subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_013519235.1
COORDINATES: similar to AA sequence:RefSeq:WP_015041997.1
GO:0006096 - glycolytic process [Evidence IEA]
dihydrolipoamide acetyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015040686.1
COORDINATES: similar to AA sequence:RefSeq:WP_018647710.1
COORDINATES: similar to AA sequence:RefSeq:WP_015064874.1
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: similar to AA sequence:RefSeq:WP_012975894.1
COORDINATES: similar to AA sequence:RefSeq:WP_003603845.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975892.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187981.1
COORDINATES: similar to AA sequence:RefSeq:WP_007558617.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975889.1
COORDINATES: similar to AA sequence:RefSeq:WP_013714844.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013395486.1
COORDINATES: similar to AA sequence:RefSeq:WP_008141948.1
COORDINATES: similar to AA sequence:RefSeq:WP_014495918.1
COORDINATES: similar to AA sequence:RefSeq:WP_011086755.1
COORDINATES: similar to AA sequence:RefSeq:WP_013395490.1
COORDINATES: similar to AA sequence:RefSeq:WP_002965659.1
COORDINATES: similar to AA sequence:RefSeq:WP_013395492.1
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
succinylglutamate desuccinylase/aspartoacylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010974498.1
COORDINATES: similar to AA sequence:RefSeq:WP_011514815.1
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018719463.1
COORDINATES: similar to AA sequence:RefSeq:WP_018719462.1
COORDINATES: similar to AA sequence:RefSeq:WP_014200022.1
GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013080.2
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017308186.1
formylglycine-generating enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006521252.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0071586 - CAAX-box protein processing [Evidence IEA]
CPBP family intramembrane metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_076611552.1
GO:0015074 - DNA integration [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
integrase core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011750398.1
COORDINATES: similar to AA sequence:RefSeq:WP_013214711.1
COORDINATES: similar to AA sequence:RefSeq:WP_011665247.1
COORDINATES: similar to AA sequence:RefSeq:WP_013214712.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009541376.1
COORDINATES: similar to AA sequence:RefSeq:WP_018480148.1
COORDINATES: protein motif:HMM:NF012738.2
class I adenylate-forming enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016347417.1
COORDINATES: similar to AA sequence:RefSeq:WP_018493972.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0004024 - alcohol dehydrogenase activity, zinc-dependent [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF017768.2
ethanolamine ammonia-lyase light chain EutC
COORDINATES: similar to AA sequence:RefSeq:WP_007436209.1
COORDINATES: similar to AA sequence:RefSeq:WP_010111401.1
COORDINATES: similar to AA sequence:RefSeq:WP_011537208.1
COORDINATES: similar to AA sequence:RefSeq:WP_011537207.1
COORDINATES: similar to AA sequence:RefSeq:WP_019402431.1
COORDINATES: similar to AA sequence:RefSeq:WP_008840021.1
COORDINATES: similar to AA sequence:RefSeq:WP_018260715.1
COORDINATES: protein motif:HMM:NF014763.2
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:NF027890.2
COORDINATES: protein motif:HMM:NF024736.2
COORDINATES: similar to AA sequence:RefSeq:WP_015956524.1
COORDINATES: similar to AA sequence:RefSeq:WP_007194121.1
GO:0006486 - protein glycosylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016145.2
polysaccharide pyruvyl transferase family protein
COORDINATES: protein motif:HMM:NF012551.2
COORDINATES: protein motif:HMM:NF037970.1
COORDINATES: protein motif:HMM:TIGR00696.1
GO:0043163 - cell envelope organization [Evidence IEA]
COORDINATES: protein motif:HMM:NF024857.2
GO:0043856 - anti-sigma factor antagonist activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024832.2
COORDINATES: protein motif:HMM:TIGR00254.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF019314.2
COORDINATES: similar to AA sequence:RefSeq:WP_012567330.1
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_076611121.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS5-like element ISAzba7 family transposase
COORDINATES: protein motif:HMM:NF014606.2
COORDINATES: similar to AA sequence:RefSeq:WP_006083680.1
COORDINATES: similar to AA sequence:RefSeq:WP_019015836.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611193.1
COORDINATES: similar to AA sequence:RefSeq:WP_015932817.1
COORDINATES: similar to AA sequence:RefSeq:WP_007726622.1
COORDINATES: similar to AA sequence:RefSeq:WP_008110936.1
COORDINATES: similar to AA sequence:RefSeq:WP_008110940.1
COORDINATES: similar to AA sequence:RefSeq:WP_012403892.1
GO:0016813 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines [Evidence IEA]
hydantoinase/carbamoylase family amidase
COORDINATES: similar to AA sequence:RefSeq:WP_014189266.1
COORDINATES: protein motif:HMM:NF012958.2
COORDINATES: similar to AA sequence:RefSeq:WP_004390078.1
COORDINATES: similar to AA sequence:RefSeq:WP_020552482.1
COORDINATES: similar to AA sequence:RefSeq:WP_012769055.1
GO:0008667 - 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity [Evidence IEA]
GO:0019290 - siderophore biosynthetic process [Evidence IEA]
2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014892198.1
COORDINATES: similar to AA sequence:RefSeq:WP_005334237.1
GO:0008668 - (2,3-dihydroxybenzoyl)adenylate synthase activity [Evidence IEA]
(2,3-dihydroxybenzoyl)adenylate synthase
COORDINATES: protein motif:HMM:TIGR00543.1
GO:0008909 - isochorismate synthase activity [Evidence IEA]
GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013069.2
COORDINATES: protein motif:HMM:TIGR01730.1
15.10 : Adaptations to atypical conditions
COORDINATES: protein motif:HMM:NF007792.0
GO:0042931 - enterobactin transmembrane transporter activity [Evidence IEA]
GO:0042930 - enterobactin transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013801744.1
COORDINATES: similar to AA sequence:RefSeq:WP_008444492.1
COORDINATES: similar to AA sequence:RefSeq:WP_008945448.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975795.1
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: protein motif:HMM:TIGR00180.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249701.1
COORDINATES: similar to AA sequence:RefSeq:WP_014241952.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189197.1
TonB-dependent hemoglobin/transferrin/lactoferrin family receptor
COORDINATES: similar to AA sequence:RefSeq:WP_013420107.1
heme utilization cystosolic carrier protein HutX
COORDINATES: similar to AA sequence:RefSeq:WP_014189199.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0007165 - signal transduction [Evidence IEA]
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_011978138.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199542.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189202.1
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189203.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189204.1
ChuX/HutX family heme-like substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013210033.1
carbon-nitrogen hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011159700.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016646 - oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012497424.1
COORDINATES: similar to AA sequence:RefSeq:WP_011159698.1
COORDINATES: similar to AA sequence:RefSeq:WP_013504030.1
COORDINATES: similar to AA sequence:RefSeq:WP_012113593.1
COORDINATES: similar to AA sequence:RefSeq:WP_002966338.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008615021.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
cbb3-type cytochrome c oxidase subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_014249381.1
COORDINATES: similar to AA sequence:RefSeq:WP_013032584.1
COORDINATES: similar to AA sequence:RefSeq:WP_009488371.1
COORDINATES: similar to AA sequence:RefSeq:WP_012733811.1
COORDINATES: protein motif:HMM:NF022115.2
COORDINATES: similar to AA sequence:RefSeq:WP_011383029.1
COORDINATES: similar to AA sequence:RefSeq:WP_019875310.1
COORDINATES: similar to AA sequence:RefSeq:WP_012698943.1
GO:0015416 - ABC-type phosphonate transporter activity [Evidence IEA]
GO:0015716 - organic phosphonate transport [Evidence IEA]
phosphonate ABC transporter, permease protein PhnE
COORDINATES: similar to AA sequence:RefSeq:WP_012698945.1
COORDINATES: similar to AA sequence:RefSeq:WP_012698946.1
NifB/NifX family molybdenum-iron cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011307247.1
COORDINATES: similar to AA sequence:RefSeq:WP_012698949.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199514.1
GO:0016613 - vanadium-iron nitrogenase complex [Evidence IEA]
GO:0016163 - nitrogenase activity [Evidence IEA]
GO:0009399 - nitrogen fixation [Evidence IEA]
nitrogenase vanadium-iron protein, alpha chain
COORDINATES: similar to AA sequence:RefSeq:WP_012974225.1
GO:0004462 - lactoylglutathione lyase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0051596 - methylglyoxal catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: similar to AA sequence:RefSeq:WP_011471362.1
COORDINATES: similar to AA sequence:RefSeq:WP_012698967.1
COORDINATES: protein motif:HMM:NF013429.2
COORDINATES: similar to AA sequence:RefSeq:WP_012698963.1
COORDINATES: similar to AA sequence:RefSeq:WP_013418192.1
nitrogenase iron-molybdenum cofactor biosynthesis protein NifN
COORDINATES: similar to AA sequence:RefSeq:WP_008932813.1
nitrogenase iron-molybdenum cofactor biosynthesis protein NifE
COORDINATES: protein motif:HMM:NF014620.2
COORDINATES: similar to AA sequence:RefSeq:WP_012698942.1
Nif11-like leader peptide family natural product precursor
COORDINATES: similar to AA sequence:RefSeq:WP_012698944.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0043168 - anion binding [Evidence IEA]; GO:0043225 - ATPase-coupled inorganic anion transmembrane transporter activity [Evidence IEA]
phosphate/phosphite/phosphonate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018063554.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013418187.1
COORDINATES: similar to AA sequence:RefSeq:WP_011156954.1
COORDINATES: similar to AA sequence:RefSeq:WP_011021249.1
COORDINATES: similar to AA sequence:RefSeq:WP_011156952.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612038.1
DDE-type integrase/transposase/recombinase
COORDINATES: similar to AA sequence:RefSeq:WP_014199495.1
GO:0070403 - NAD+ binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978299.1
COORDINATES: protein motif:HMM:NF012245.2
COORDINATES: similar to AA sequence:RefSeq:WP_009208874.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197554.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189498.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197557.1
COORDINATES: similar to AA sequence:RefSeq:WP_010683957.1
crotonase/enoyl-CoA hydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014992477.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: protein motif:HMM:NF012656.2
COORDINATES: similar to AA sequence:RefSeq:WP_008614471.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199487.1
GO:0050661 - NADP binding [Evidence IEA]
NAD(P)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014199486.1
COORDINATES: similar to AA sequence:RefSeq:WP_007002124.1
COORDINATES: similar to AA sequence:RefSeq:WP_008387743.1
COORDINATES: protein motif:HMM:NF024880.2
methyltransferase domain-containing protein
COORDINATES: protein motif:HMM:TIGR04534.1
COORDINATES: protein motif:HMM:TIGR02937.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01783.1
COORDINATES: similar to AA sequence:RefSeq:WP_007568085.1
COORDINATES: similar to AA sequence:RefSeq:WP_012110984.1
COORDINATES: similar to AA sequence:RefSeq:WP_016922197.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012978372.1
COORDINATES: similar to AA sequence:RefSeq:WP_007006985.1
putative glycolipid-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011974304.1
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020095011.1
COORDINATES: similar to AA sequence:RefSeq:WP_007625759.1
COORDINATES: similar to AA sequence:RefSeq:WP_008827519.1
COORDINATES: similar to AA sequence:RefSeq:WP_020475018.1
COORDINATES: similar to AA sequence:RefSeq:WP_015980379.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197511.1
ribbon-helix-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014197237.1
COORDINATES: protein motif:HMM:NF024252.2
COORDINATES: protein motif:HMM:NF027273.2
COORDINATES: protein motif:HMM:NF022019.2
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012422.2
COORDINATES: protein motif:HMM:NF017663.2
GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
RusA family crossover junction endodeoxyribonuclease
COORDINATES: protein motif:HMM:TIGR00663.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019054998.1
GO:0004519 - endonuclease activity [Evidence IEA]
HNH endonuclease signature motif containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015989315.1
COORDINATES: protein motif:HMM:NF024949.2
COORDINATES: protein motif:HMM:NF013855.2
COORDINATES: protein motif:HMM:NF013704.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019833807.1
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: protein motif:HMM:NF018785.2
COORDINATES: protein motif:HMM:NF012464.2
COORDINATES: protein motif:HMM:NF027409.2
COORDINATES: similar to AA sequence:RefSeq:WP_019053593.1
COORDINATES: similar to AA sequence:RefSeq:WP_006820527.1
COORDINATES: similar to AA sequence:RefSeq:WP_018610243.1
COORDINATES: protein motif:HMM:NF018125.2
COORDINATES: similar to AA sequence:RefSeq:WP_007082100.1
COORDINATES: protein motif:HMM:NF021494.2
COORDINATES: similar to AA sequence:RefSeq:WP_008968294.1
COORDINATES: protein motif:HMM:NF021467.2
COORDINATES: protein motif:HMM:NF024659.2
COORDINATES: similar to AA sequence:RefSeq:WP_015875600.1
COORDINATES: similar to AA sequence:RefSeq:WP_006622940.1
COORDINATES: similar to AA sequence:RefSeq:WP_009303207.1
COORDINATES: protein motif:HMM:NF037025.2
COORDINATES: similar to AA sequence:RefSeq:WP_017424278.1
COORDINATES: similar to AA sequence:RefSeq:WP_011298559.1
Gp138 family membrane-puncturing spike protein
COORDINATES: similar to AA sequence:RefSeq:WP_010111173.1
COORDINATES: protein motif:HMM:NF016736.2
COORDINATES: protein motif:HMM:NF022494.2
COORDINATES: similar to AA sequence:RefSeq:WP_014241528.1